data_7PR
#
_chem_comp.id 7PR
_chem_comp.name "praseodymium triacetate"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C6 H9 O6 Pr"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2017-09-26
_chem_comp.pdbx_modified_date 2018-01-19
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 318.040
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 7PR
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6B41
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
7PR C1 C1 C 0 1 N N N N N N 3.233 1.090 25.879 -0.218 2.686 -0.182 C1 7PR 1
7PR C2 C2 C 0 1 N N N N N N -1.531 -2.482 28.260 3.164 -0.671 -0.067 C2 7PR 2
7PR C3 C3 C 0 1 N N N N N N -1.439 -3.355 27.055 4.532 -1.261 -0.293 C3 7PR 3
7PR O5 O1 O 0 1 N N N N N N 4.343 0.761 25.625 -0.221 2.353 -1.344 O5 7PR 4
7PR C C4 C 0 1 N N N N N N 2.756 2.485 26.064 -0.408 4.135 0.187 C 7PR 5
7PR O O2 O 0 1 N N N N N N 2.300 0.159 26.037 -0.049 1.765 0.779 O 7PR 6
7PR PR PR1 PR 0 0 N N N N N N -0.096 0.265 26.609 0.043 -0.425 0.117 PR 7PR 7
7PR O3 O3 O 0 1 N N N N N N -0.464 2.534 27.438 -1.892 -1.616 -0.174 O3 7PR 8
7PR C4 C5 C 0 1 N N N N N N 0.145 3.715 27.585 -3.046 -0.945 -0.039 C4 7PR 9
7PR O4 O4 O 0 1 N N N N N N 0.235 4.206 28.676 -3.036 0.211 0.313 O4 7PR 10
7PR C5 C6 C 0 1 N N N N N N 0.702 4.275 26.321 -4.356 -1.633 -0.328 C5 7PR 11
7PR O1 O5 O 0 1 N N N N N N -0.723 -1.391 28.304 2.069 -1.425 -0.256 O1 7PR 12
7PR O2 O6 O 0 1 N N N N N N -2.267 -2.642 29.184 3.052 0.480 0.283 O2 7PR 13
7PR H1 H1 H 0 1 N N N N N N -2.160 -4.181 27.144 4.828 -1.107 -1.331 H1 7PR 14
7PR H2 H2 H 0 1 N N N N N N -1.668 -2.764 26.156 5.251 -0.773 0.365 H2 7PR 15
7PR H3 H3 H 0 1 N N N N N N -0.421 -3.764 26.976 4.508 -2.329 -0.077 H3 7PR 16
7PR H4 H4 H 0 1 N N N N N N 3.597 3.181 25.929 -0.533 4.727 -0.720 H4 7PR 17
7PR H5 H5 H 0 1 N N N N N N 1.974 2.706 25.323 -1.295 4.236 0.812 H5 7PR 18
7PR H6 H6 H 0 1 N N N N N N 2.344 2.600 27.077 0.465 4.488 0.735 H6 7PR 19
7PR H7 H7 H 0 1 N N N N N N 1.218 5.222 26.535 -4.166 -2.663 -0.630 H7 7PR 20
7PR H8 H8 H 0 1 N N N N N N 1.415 3.559 25.886 -4.976 -1.625 0.569 H8 7PR 21
7PR H9 H9 H 0 1 N N N N N N -0.116 4.456 25.609 -4.873 -1.108 -1.131 H9 7PR 22
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
7PR C1 O5 DOUB N N 1
7PR C1 C SING N N 2
7PR C1 O SING N N 3
7PR C2 C3 SING N N 4
7PR C2 O1 SING N N 5
7PR C2 O2 DOUB N N 6
7PR O3 C4 SING N N 7
7PR C4 O4 DOUB N N 8
7PR C4 C5 SING N N 9
7PR O3 PR SING N N 10
7PR PR O1 SING N N 11
7PR PR O SING N N 12
7PR C3 H1 SING N N 13
7PR C3 H2 SING N N 14
7PR C3 H3 SING N N 15
7PR C H4 SING N N 16
7PR C H5 SING N N 17
7PR C H6 SING N N 18
7PR C5 H7 SING N N 19
7PR C5 H8 SING N N 20
7PR C5 H9 SING N N 21
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
7PR SMILES ACDLabs 12.01 C(=O)(C)O[Pr](OC(C)=O)OC(=O)C
7PR InChI InChI 1.03 InChI=1S/3C2H4O2.Pr/c3*1-2(3)4;/h3*1H3,(H,3,4);/q;;;+3/p-3
7PR InChIKey InChI 1.03 KPXRPRLCONABEG-UHFFFAOYSA-K
7PR SMILES_CANONICAL CACTVS 3.385 CC(=O)O[Pr](OC(C)=O)OC(C)=O
7PR SMILES CACTVS 3.385 CC(=O)O[Pr](OC(C)=O)OC(C)=O
7PR SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 CC(=O)O[Pr](OC(=O)C)OC(=O)C
7PR SMILES "OpenEye OEToolkits" 2.0.6 CC(=O)O[Pr](OC(=O)C)OC(=O)C
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
7PR "SYSTEMATIC NAME" ACDLabs 12.01 "praseodymium triacetate"
7PR "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 triacetyloxypraseodymium
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
7PR 'Create component' 2017-09-26 RCSB
7PR 'Initial release' 2018-01-24 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
7PR C1 C 1.304 2.247 1
7PR C2 C -2.598 0.005 2
7PR C3 C -2.601 -1.495 3
7PR O5 O 0.006 3.000 4
7PR C C 2.604 2.995 5
7PR O O 1.300 0.747 6
7PR PR Pr -0.000 0.000 7
7PR O3 O -0.003 -1.500 8
7PR C4 C 1.295 -2.252 9
7PR O4 O 1.291 -3.752 10
7PR C5 C 2.595 -1.505 11
7PR O1 O -1.298 0.753 12
7PR O2 O -3.896 0.758 13
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
7PR C1 O5 DOUBLE NONE 1
7PR C1 C SINGLE NONE 2
7PR C1 O SINGLE NONE 3
7PR C2 C3 SINGLE NONE 4
7PR C2 O1 SINGLE NONE 5
7PR C2 O2 DOUBLE NONE 6
7PR O3 C4 SINGLE NONE 7
7PR C4 O4 DOUBLE NONE 8
7PR C4 C5 SINGLE NONE 9
7PR O3 PR SINGLE NONE 10
7PR PR O1 SINGLE NONE 11
7PR PR O SINGLE NONE 12
#
#
#
_pdbe_chem_comp_rdkit_properties.comp_id 7PR
_pdbe_chem_comp_rdkit_properties.exactmw 317.948
_pdbe_chem_comp_rdkit_properties.amw 318.040
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 6
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 0
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 6
_pdbe_chem_comp_rdkit_properties.NumHBD 0
_pdbe_chem_comp_rdkit_properties.NumHBA 6
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 13
_pdbe_chem_comp_rdkit_properties.NumAtoms 22
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 7
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.500
_pdbe_chem_comp_rdkit_properties.NumRings 0
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 104.787
_pdbe_chem_comp_rdkit_properties.tpsa 78.900
_pdbe_chem_comp_rdkit_properties.CrippenClogP 0.041
_pdbe_chem_comp_rdkit_properties.CrippenMR 35.298
_pdbe_chem_comp_rdkit_properties.chi0v 9.731
_pdbe_chem_comp_rdkit_properties.chi1v 7.219
_pdbe_chem_comp_rdkit_properties.chi2v 4.522
_pdbe_chem_comp_rdkit_properties.chi3v 4.522
_pdbe_chem_comp_rdkit_properties.chi4v 2.480
_pdbe_chem_comp_rdkit_properties.chi0n 15.027
_pdbe_chem_comp_rdkit_properties.chi1n 7.182
_pdbe_chem_comp_rdkit_properties.chi2n 0.610
_pdbe_chem_comp_rdkit_properties.chi3n 0.610
_pdbe_chem_comp_rdkit_properties.chi4n 0.334
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -0.226
_pdbe_chem_comp_rdkit_properties.kappa1 4.103
_pdbe_chem_comp_rdkit_properties.kappa2 6.261
_pdbe_chem_comp_rdkit_properties.kappa3 8.113
_pdbe_chem_comp_rdkit_properties.Phi 1.976
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
7PR UniChem ChEBI 63078
7PR UniChem eMolecules 29915352
7PR UniChem SureChEMBL SCHEMBL274120
7PR UniChem ACTor 12550-39-9
7PR UniChem 'EPA CompTox Dashboard' DTXSID50890615
7PR UniChem Nikkaji J118.398B
7PR UniChem 'PubChem TPHARMA' 14923700
7PR UniChem PubChem 136496672
7PR UniChem PubChem 165418
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
7PR C1 -0.296 -0.063 -3.095 ETKDGv3 1
7PR C2 -0.355 -1.792 0.415 ETKDGv3 2
7PR C3 0.799 -1.265 1.199 ETKDGv3 3
7PR O5 0.501 0.391 -3.957 ETKDGv3 4
7PR C -0.868 0.840 -2.056 ETKDGv3 5
7PR O -0.603 -1.418 -3.086 ETKDGv3 6
7PR PR -18.885 16.467 25.686 ETKDGv3 7
7PR O3 1.737 -2.705 -2.096 ETKDGv3 8
7PR C4 2.875 -1.971 -2.404 ETKDGv3 9
7PR O4 3.691 -2.411 -3.256 ETKDGv3 10
7PR C5 3.156 -0.694 -1.688 ETKDGv3 11
7PR O1 -0.134 -2.580 -0.707 ETKDGv3 12
7PR O2 -1.532 -1.494 0.747 ETKDGv3 13
7PR H1 0.595 -1.367 2.286 ETKDGv3 14
7PR H2 0.955 -0.194 0.954 ETKDGv3 15
7PR H3 1.719 -1.834 0.951 ETKDGv3 16
7PR H4 -1.116 1.825 -2.503 ETKDGv3 17
7PR H5 -1.792 0.394 -1.633 ETKDGv3 18
7PR H6 -0.128 0.983 -1.241 ETKDGv3 19
7PR H7 3.771 -0.901 -0.788 ETKDGv3 20
7PR H8 3.703 0.006 -2.354 ETKDGv3 21
7PR H9 2.204 -0.218 -1.376 ETKDGv3 22
#