data_7CA
#
_chem_comp.id 7CA
_chem_comp.name
"5,7-DIHYDROXY-2-(4-METHOXYPHENYL)-8-(3-METHYLBUTYL)-4-OXO-4H-CHROMEN-3-YL 6-DEOXY-ALPHA-L-MANNOPYRANOSIDE"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C27 H32 O10"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms "ICARISID II"
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2006-05-26
_chem_comp.pdbx_modified_date 2021-03-01
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 516.537
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 7CA
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 2H44
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
7CA C1 C1 C 0 1 N N N N N N 76.794 27.433 27.347 2.821 5.372 -0.196 C1 7CA 1
7CA O1 O1 O 0 1 N N N N N N 76.098 26.173 27.413 3.213 4.424 -1.190 O1 7CA 2
7CA C2 C2 C 0 1 Y N N N N N 74.720 26.380 27.390 2.375 3.361 -1.070 C2 7CA 3
7CA C3 C3 C 0 1 Y N N N N N 74.178 27.635 27.649 2.517 2.269 -1.917 C3 7CA 4
7CA C4 C4 C 0 1 Y N N N N N 72.800 27.805 27.632 1.669 1.189 -1.799 C4 7CA 5
7CA C5 C5 C 0 1 Y N N N N N 73.873 25.304 27.095 1.382 3.368 -0.098 C5 7CA 6
7CA C6 C6 C 0 1 Y N N N N N 72.481 25.489 27.082 0.527 2.296 0.023 C6 7CA 7
7CA C7 C7 C 0 1 Y N N N N N 71.928 26.746 27.357 0.665 1.194 -0.826 C7 7CA 8
7CA C8 C8 C 0 1 Y N N N N N 70.553 26.980 27.391 -0.245 0.041 -0.697 C8 7CA 9
7CA O2 O2 O 0 1 Y N N N N N 70.119 28.030 28.187 -1.567 0.267 -0.618 O2 7CA 10
7CA C9 C9 C 0 1 Y N N N N N 69.581 26.130 26.774 0.287 -1.213 -0.655 C9 7CA 11
7CA C10 C10 C 0 1 Y N N N N N 68.211 26.378 27.010 -0.576 -2.332 -0.530 C10 7CA 12
7CA C11 C11 C 0 1 Y N N N N N 67.816 27.432 27.844 -2.021 -2.068 -0.451 C11 7CA 13
7CA C12 C12 C 0 1 Y N N N N N 68.788 28.255 28.428 -2.464 -0.735 -0.503 C12 7CA 14
7CA O3 O3 O 0 1 N N N N N N 67.361 25.664 26.487 -0.136 -3.470 -0.490 O3 7CA 15
7CA C13 C13 C 0 1 Y N N N N N 66.468 27.684 28.096 -2.946 -3.114 -0.326 C13 7CA 16
7CA C14 C14 C 0 1 Y N N N N N 66.099 28.752 28.921 -4.295 -2.825 -0.255 C14 7CA 17
7CA C15 C15 C 0 1 Y N N N N N 67.079 29.566 29.495 -4.731 -1.505 -0.307 C15 7CA 18
7CA C16 C16 C 0 1 Y N N N N N 68.417 29.306 29.253 -3.823 -0.465 -0.430 C16 7CA 19
7CA O4 O4 O 0 1 N N N N N N 65.501 26.882 27.541 -2.519 -4.401 -0.275 O4 7CA 20
7CA O10 O10 O 0 1 N N N N N N 66.725 30.592 30.338 -6.059 -1.232 -0.236 O10 7CA 21
7CA C17 C17 C 0 1 N N N N N N 69.488 30.178 29.886 -4.311 0.959 -0.484 C17 7CA 22
7CA C18 C18 C 0 1 N N N N N N 69.426 31.653 29.485 -4.382 1.529 0.934 C18 7CA 23
7CA C19 C19 C 0 1 N N N N N N 70.079 32.099 28.347 -4.878 2.975 0.879 C19 7CA 24
7CA C20 C20 C 0 1 N N N N N N 70.011 33.575 27.961 -6.317 3.001 0.361 C20 7CA 25
7CA C21 C21 C 0 1 N N N N N N 70.868 31.119 27.474 -4.830 3.584 2.282 C21 7CA 26
7CA O5 O5 O 0 1 N N N N N N 69.939 25.029 25.988 1.634 -1.390 -0.733 O5 7CA 27
7CA C22 C22 C 0 1 N N S N N N 70.396 25.377 24.675 2.044 -1.985 0.500 C22 7CA 28
7CA O6 O6 O 0 1 N N N N N N 69.293 25.795 23.849 2.073 -0.990 1.521 O6 7CA 29
7CA C23 C23 C 0 1 N N R N N N 71.064 24.123 24.067 3.437 -2.595 0.332 C23 7CA 30
7CA O7 O7 O 0 1 N N N N N N 71.682 24.434 22.824 3.864 -3.166 1.571 O7 7CA 31
7CA C24 C24 C 0 1 N N R N N N 70.015 23.013 23.875 4.417 -1.496 -0.090 C24 7CA 32
7CA O8 O8 O 0 1 N N N N N N 70.597 21.891 23.227 5.748 -2.016 -0.107 O8 7CA 33
7CA C25 C25 C 0 1 N N R N N N 68.830 23.525 23.059 4.327 -0.346 0.919 C25 7CA 34
7CA O9 O9 O 0 1 N N N N N N 67.828 22.521 22.993 5.121 0.752 0.466 O9 7CA 35
7CA C26 C26 C 0 1 N N S N N N 68.258 24.790 23.711 2.867 0.095 1.043 C26 7CA 36
7CA C27 C27 C 0 1 N N N N N N 67.132 25.353 22.820 2.772 1.266 2.024 C27 7CA 37
7CA H11 1H1 H 0 1 N N N N N N 76.184 28.160 26.790 3.469 6.247 -0.254 H11 7CA 38
7CA H12 2H1 H 0 1 N N N N N N 77.757 27.293 26.835 1.788 5.673 -0.368 H12 7CA 39
7CA H13 3H1 H 0 1 N N N N N N 76.971 27.808 28.366 2.908 4.921 0.792 H13 7CA 40
7CA H3 H3 H 0 1 N N N N N N 74.826 28.473 27.862 3.292 2.266 -2.668 H3 7CA 41
7CA H4 H4 H 0 1 N N N N N N 72.390 28.783 27.837 1.779 0.340 -2.458 H4 7CA 42
7CA H5 H5 H 0 1 N N N N N N 74.291 24.332 26.878 1.276 4.220 0.558 H5 7CA 43
7CA H6 H6 H 0 1 N N N N N N 71.832 24.655 26.858 -0.247 2.304 0.776 H6 7CA 44
7CA H14 H14 H 0 1 N N N N N N 65.055 28.948 29.115 -5.014 -3.625 -0.158 H14 7CA 45
7CA HO4 HO4 H 0 1 N N N N N N 64.832 26.697 28.190 -2.370 -4.610 0.657 HO4 7CA 46
7CA HO10 HO10 H 0 0 N N N N N N 66.643 30.260 31.224 -6.272 -1.119 0.700 HO10 7CA 47
7CA H171 1H17 H 0 0 N N N N N N 70.456 29.795 29.531 -3.623 1.557 -1.082 H171 7CA 48
7CA H172 2H17 H 0 0 N N N N N N 69.367 30.121 30.978 -5.303 0.986 -0.936 H172 7CA 49
7CA H181 1H18 H 0 0 N N N N N N 69.960 32.162 30.301 -5.070 0.931 1.532 H181 7CA 50
7CA H182 2H18 H 0 0 N N N N N N 68.361 31.880 29.331 -3.390 1.502 1.386 H182 7CA 51
7CA H19 H19 H 0 1 N N N N N N 70.193 31.066 28.707 -4.240 3.553 0.210 H19 7CA 52
7CA H201 1H20 H 0 0 N N N N N N 69.097 33.759 27.377 -6.955 2.423 1.030 H201 7CA 53
7CA H202 2H20 H 0 0 N N N N N N 70.892 33.837 27.357 -6.670 4.031 0.321 H202 7CA 54
7CA H203 3H20 H 0 0 N N N N N N 69.995 34.192 28.871 -6.351 2.567 -0.639 H203 7CA 55
7CA H211 1H21 H 0 0 N N N N N N 70.287 30.194 27.344 -3.805 3.566 2.651 H211 7CA 56
7CA H212 2H21 H 0 0 N N N N N N 71.827 30.885 27.960 -5.183 4.615 2.243 H212 7CA 57
7CA H213 3H21 H 0 0 N N N N N N 71.057 31.574 26.490 -5.468 3.007 2.951 H213 7CA 58
7CA H22 H22 H 0 1 N N N N N N 71.110 26.212 24.731 1.337 -2.767 0.777 H22 7CA 59
7CA H23 H23 H 0 1 N N N N N N 71.842 23.769 24.760 3.405 -3.369 -0.435 H23 7CA 60
7CA HO7 HO7 H 0 1 N N N N N N 71.018 24.503 22.148 3.226 -3.858 1.794 HO7 7CA 61
7CA H24 H24 H 0 1 N N N N N N 69.653 22.707 24.868 4.154 -1.133 -1.084 H24 7CA 62
7CA HO8 HO8 H 0 1 N N N N N N 70.727 22.088 22.307 5.759 -2.736 -0.753 HO8 7CA 63
7CA H25 H25 H 0 1 N N N N N N 69.168 23.768 22.041 4.690 -0.683 1.890 H25 7CA 64
7CA HO9 HO9 H 0 1 N N N N N N 67.604 22.356 22.085 5.030 1.454 1.126 HO9 7CA 65
7CA H26 H26 H 0 1 N N N N N N 67.866 24.534 24.706 2.499 0.410 0.066 H26 7CA 66
7CA H271 1H27 H 0 0 N N N N N N 66.929 24.650 21.998 3.137 0.951 3.001 H271 7CA 67
7CA H272 2H27 H 0 0 N N N N N N 67.443 26.323 22.405 3.378 2.095 1.659 H272 7CA 68
7CA H273 3H27 H 0 0 N N N N N N 66.221 25.487 23.421 1.733 1.585 2.109 H273 7CA 69
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
7CA C1 O1 SING N N 1
7CA C1 H11 SING N N 2
7CA C1 H12 SING N N 3
7CA C1 H13 SING N N 4
7CA O1 C2 SING N N 5
7CA C2 C3 DOUB Y N 6
7CA C2 C5 SING Y N 7
7CA C3 C4 SING Y N 8
7CA C3 H3 SING N N 9
7CA C4 C7 DOUB Y N 10
7CA C4 H4 SING N N 11
7CA C5 C6 DOUB Y N 12
7CA C5 H5 SING N N 13
7CA C6 C7 SING Y N 14
7CA C6 H6 SING N N 15
7CA C7 C8 SING Y N 16
7CA C8 O2 SING Y N 17
7CA C8 C9 DOUB Y N 18
7CA O2 C12 SING Y N 19
7CA C9 C10 SING Y N 20
7CA C9 O5 SING N N 21
7CA C10 C11 SING Y N 22
7CA C10 O3 DOUB N N 23
7CA C11 C12 SING Y N 24
7CA C11 C13 DOUB Y N 25
7CA C12 C16 DOUB Y N 26
7CA C13 C14 SING Y N 27
7CA C13 O4 SING N N 28
7CA C14 C15 DOUB Y N 29
7CA C14 H14 SING N N 30
7CA C15 C16 SING Y N 31
7CA C15 O10 SING N N 32
7CA C16 C17 SING N N 33
7CA O4 HO4 SING N N 34
7CA O10 HO10 SING N N 35
7CA C17 C18 SING N N 36
7CA C17 H171 SING N N 37
7CA C17 H172 SING N N 38
7CA C18 C19 SING N N 39
7CA C18 H181 SING N N 40
7CA C18 H182 SING N N 41
7CA C19 C20 SING N N 42
7CA C19 C21 SING N N 43
7CA C19 H19 SING N N 44
7CA C20 H201 SING N N 45
7CA C20 H202 SING N N 46
7CA C20 H203 SING N N 47
7CA C21 H211 SING N N 48
7CA C21 H212 SING N N 49
7CA C21 H213 SING N N 50
7CA O5 C22 SING N N 51
7CA C22 O6 SING N N 52
7CA C22 C23 SING N N 53
7CA C22 H22 SING N N 54
7CA O6 C26 SING N N 55
7CA C23 O7 SING N N 56
7CA C23 C24 SING N N 57
7CA C23 H23 SING N N 58
7CA O7 HO7 SING N N 59
7CA C24 O8 SING N N 60
7CA C24 C25 SING N N 61
7CA C24 H24 SING N N 62
7CA O8 HO8 SING N N 63
7CA C25 O9 SING N N 64
7CA C25 C26 SING N N 65
7CA C25 H25 SING N N 66
7CA O9 HO9 SING N N 67
7CA C26 C27 SING N N 68
7CA C26 H26 SING N N 69
7CA C27 H271 SING N N 70
7CA C27 H272 SING N N 71
7CA C27 H273 SING N N 72
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
7CA SMILES ACDLabs 10.04 O=C2C(OC1OC(C(O)C(O)C1O)C)=C(Oc3c(c(O)cc(O)c23)CCC(C)C)c4ccc(OC)cc4
7CA SMILES_CANONICAL CACTVS 3.341 COc1ccc(cc1)C2=C(O[C@@H]3O[C@@H](C)[C@H](O)[C@@H](O)[C@H]3O)C(=O)c4c(O)cc(O)c(CCC(C)C)c4O2
7CA SMILES CACTVS 3.341 COc1ccc(cc1)C2=C(O[CH]3O[CH](C)[CH](O)[CH](O)[CH]3O)C(=O)c4c(O)cc(O)c(CCC(C)C)c4O2
7CA SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 C[C@H]1[C@@H]([C@H]([C@H]([C@@H](O1)OC2=C(Oc3c(c(cc(c3C2=O)O)O)CCC(C)C)c4ccc(cc4)OC)O)O)O
7CA SMILES "OpenEye OEToolkits" 1.5.0 CC1C(C(C(C(O1)OC2=C(Oc3c(c(cc(c3C2=O)O)O)CCC(C)C)c4ccc(cc4)OC)O)O)O
7CA InChI InChI 1.03 InChI=1S/C27H32O10/c1-12(2)5-10-16-17(28)11-18(29)19-21(31)26(37-27-23(33)22(32)20(30)13(3)35-27)24(36-25(16)19)14-6-8-15(34-4)9-7-14/h6-9,11-13,20,22-23,27-30,32-33H,5,10H2,1-4H3/t13-,20-,22+,23+,27-/m0/s1
7CA InChIKey InChI 1.03 PFVZUXQCELCLBL-LVKFHIPRSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
7CA "SYSTEMATIC NAME" ACDLabs 10.04 "5,7-dihydroxy-2-(4-methoxyphenyl)-8-(3-methylbutyl)-4-oxo-4H-chromen-3-yl 6-deoxy-alpha-L-mannopyranoside"
7CA "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 5,7-dihydroxy-2-(4-methoxyphenyl)-8-(3-methylbutyl)-3-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyl-oxan-2-yl]oxy-chromen-4-one
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
7CA 'Create component' 2006-05-26 RCSB
7CA 'Modify aromatic_flag' 2011-06-04 RCSB
7CA 'Modify descriptor' 2011-06-04 RCSB
7CA 'Modify synonyms' 2021-03-01 PDBE
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id 7CA
_pdbx_chem_comp_synonyms.name "ICARISID II"
_pdbx_chem_comp_synonyms.provenance ?
_pdbx_chem_comp_synonyms.type ?
#
_pdbe_chem_comp_synonyms.comp_id 7CA
_pdbe_chem_comp_synonyms.name 'ICARISID II'
_pdbe_chem_comp_synonyms.provenance wwPDB
_pdbe_chem_comp_synonyms.type ?
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
7CA C1 C 16.796 -2.783 1
7CA O1 O 15.497 -3.533 2
7CA C2 C 14.198 -2.783 3
7CA C3 C 14.198 -1.283 4
7CA C4 C 12.899 -0.533 5
7CA C5 C 12.899 -3.533 6
7CA C6 C 11.600 -2.783 7
7CA C7 C 11.600 -1.283 8
7CA C8 C 10.301 -0.533 9
7CA O2 O 10.301 0.967 10
7CA C9 C 9.002 -1.283 11
7CA C10 C 7.702 -0.533 12
7CA C11 C 7.702 0.967 13
7CA C12 C 9.002 1.717 14
7CA O3 O 6.404 -1.283 15
7CA C13 C 6.338 1.727 16
7CA C14 C 6.325 3.289 17
7CA C15 C 7.679 4.070 18
7CA C16 C 9.026 3.279 19
7CA O4 O 5.047 0.962 20
7CA O10 O 7.684 5.570 21
7CA C17 C 10.333 4.014 22
7CA C18 C 10.351 5.514 23
7CA C19 C 11.658 6.248 24
7CA C20 C 11.675 7.748 25
7CA C21 C 12.948 5.484 26
7CA O5 O 9.002 -2.783 27
7CA C22 C 7.702 -3.533 28
7CA O6 O 6.404 -2.783 29
7CA C23 C 7.702 -5.033 30
7CA O7 O 9.002 -5.783 31
7CA C24 C 6.404 -5.783 32
7CA O8 O 6.404 -7.283 33
7CA C25 C 5.104 -5.033 34
7CA O9 O 3.805 -5.783 35
7CA C26 C 5.104 -3.533 36
7CA C27 C 3.805 -2.783 37
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
7CA C1 O1 SINGLE NONE 1
7CA O1 C2 SINGLE NONE 2
7CA C2 C3 DOUBLE NONE 3
7CA C2 C5 SINGLE NONE 4
7CA C3 C4 SINGLE NONE 5
7CA C4 C7 DOUBLE NONE 6
7CA C5 C6 DOUBLE NONE 7
7CA C6 C7 SINGLE NONE 8
7CA C7 C8 SINGLE NONE 9
7CA C8 O2 SINGLE NONE 10
7CA C8 C9 DOUBLE NONE 11
7CA O2 C12 SINGLE NONE 12
7CA C9 C10 SINGLE NONE 13
7CA C9 O5 SINGLE NONE 14
7CA C10 C11 SINGLE NONE 15
7CA C10 O3 DOUBLE NONE 16
7CA C11 C12 DOUBLE NONE 17
7CA C11 C13 SINGLE NONE 18
7CA C12 C16 SINGLE NONE 19
7CA C13 C14 DOUBLE NONE 20
7CA C13 O4 SINGLE NONE 21
7CA C14 C15 SINGLE NONE 22
7CA C15 C16 DOUBLE NONE 23
7CA C15 O10 SINGLE NONE 24
7CA C16 C17 SINGLE NONE 25
7CA C17 C18 SINGLE NONE 26
7CA C18 C19 SINGLE NONE 27
7CA C19 C20 SINGLE NONE 28
7CA C19 C21 SINGLE NONE 29
7CA C22 O5 SINGLE BEGINWEDGE 30
7CA C22 O6 SINGLE NONE 31
7CA C22 C23 SINGLE NONE 32
7CA O6 C26 SINGLE NONE 33
7CA C23 O7 SINGLE BEGINDASH 34
7CA C23 C24 SINGLE NONE 35
7CA C24 O8 SINGLE BEGINDASH 36
7CA C24 C25 SINGLE NONE 37
7CA C25 O9 SINGLE BEGINWEDGE 38
7CA C25 C26 SINGLE NONE 39
7CA C26 C27 SINGLE BEGINDASH 40
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
7CA MurckoScaffold S1 scaffold 'O=c1c(O[C@H]2CCCCO2)c(-c2ccccc2)oc2ccccc12' InChI=1S/C20H18O4/c21-18-15-10-4-5-11-16(15)23-19(14-8-2-1-3-9-14)20(18)24-17-12-6-7-13-22-17/h1-5,8-11,17H,6-7,12-13H2/t17-/m0/s1 MJAAADNHPZZOGV-KRWDZBQOSA-N
7CA phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
7CA pyranose F2 fragment OC1CCCCO1 InChI=1S/C5H10O2/c6-5-3-1-2-4-7-5/h5-6H,1-4H2 CELWCAITJAEQNL-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
7CA C2 S1 1
7CA C3 S1 1
7CA C4 S1 1
7CA C5 S1 1
7CA C6 S1 1
7CA C7 S1 1
7CA C8 S1 1
7CA O2 S1 1
7CA C9 S1 1
7CA C10 S1 1
7CA C11 S1 1
7CA C12 S1 1
7CA O3 S1 1
7CA C13 S1 1
7CA C14 S1 1
7CA C15 S1 1
7CA C16 S1 1
7CA O5 S1 1
7CA C22 S1 1
7CA O6 S1 1
7CA C23 S1 1
7CA C24 S1 1
7CA C25 S1 1
7CA C26 S1 1
7CA C2 F1 1
7CA C3 F1 1
7CA C4 F1 1
7CA C7 F1 1
7CA C6 F1 1
7CA C5 F1 1
7CA C11 F1 2
7CA C12 F1 2
7CA C16 F1 2
7CA C15 F1 2
7CA C14 F1 2
7CA C13 F1 2
7CA C25 F2 1
7CA C26 F2 1
7CA O6 F2 1
7CA C22 F2 1
7CA C23 F2 1
7CA C24 F2 1
7CA O5 F2 1
#
_pdbe_chem_comp_rdkit_properties.comp_id 7CA
_pdbe_chem_comp_rdkit_properties.exactmw 516.200
_pdbe_chem_comp_rdkit_properties.amw 516.543
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 10
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 5
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 16
_pdbe_chem_comp_rdkit_properties.NumHBD 5
_pdbe_chem_comp_rdkit_properties.NumHBA 10
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 37
_pdbe_chem_comp_rdkit_properties.NumAtoms 69
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 10
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.444
_pdbe_chem_comp_rdkit_properties.NumRings 4
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 5
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 258.214
_pdbe_chem_comp_rdkit_properties.tpsa 159.050
_pdbe_chem_comp_rdkit_properties.CrippenClogP 0.862
_pdbe_chem_comp_rdkit_properties.CrippenMR 127.818
_pdbe_chem_comp_rdkit_properties.chi0v 17.582
_pdbe_chem_comp_rdkit_properties.chi1v 9.358
_pdbe_chem_comp_rdkit_properties.chi2v 4.416
_pdbe_chem_comp_rdkit_properties.chi3v 4.416
_pdbe_chem_comp_rdkit_properties.chi4v 2.838
_pdbe_chem_comp_rdkit_properties.chi0n 49.582
_pdbe_chem_comp_rdkit_properties.chi1n 24.899
_pdbe_chem_comp_rdkit_properties.chi2n 4.416
_pdbe_chem_comp_rdkit_properties.chi3n 4.416
_pdbe_chem_comp_rdkit_properties.chi4n 2.838
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.310
_pdbe_chem_comp_rdkit_properties.kappa1 7.630
_pdbe_chem_comp_rdkit_properties.kappa2 10.585
_pdbe_chem_comp_rdkit_properties.kappa3 5.101
_pdbe_chem_comp_rdkit_properties.Phi 2.183
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
7CA UniChem ZINC ZINC000014958362
7CA UniChem PubChem 6852214
7CA UniChem NMRShiftDB 70070740
7CA UniChem BindingDb 15338
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
7CA C1 0.692 5.734 3.164 ETKDGv3 1
7CA O1 1.350 4.482 3.321 ETKDGv3 2
7CA C2 1.021 3.329 2.594 ETKDGv3 3
7CA C3 1.709 2.204 2.827 ETKDGv3 4
7CA C4 1.397 0.965 2.086 ETKDGv3 5
7CA C5 -0.067 3.317 1.579 ETKDGv3 6
7CA C6 -0.342 2.197 0.900 ETKDGv3 7
7CA C7 0.436 0.958 1.142 ETKDGv3 8
7CA C8 0.072 -0.271 0.400 ETKDGv3 9
7CA O2 -1.292 -0.501 0.168 ETKDGv3 10
7CA C9 0.982 -1.156 -0.058 ETKDGv3 11
7CA C10 0.510 -2.394 -0.704 ETKDGv3 12
7CA C11 -0.942 -2.606 -0.899 ETKDGv3 13
7CA C12 -1.788 -1.649 -0.469 ETKDGv3 14
7CA O3 1.348 -3.252 -1.089 ETKDGv3 15
7CA C13 -1.487 -3.833 -1.541 ETKDGv3 16
7CA C14 -2.814 -3.978 -1.676 ETKDGv3 17
7CA C15 -3.743 -2.927 -1.205 ETKDGv3 18
7CA C16 -3.255 -1.799 -0.649 ETKDGv3 19
7CA O4 -0.625 -4.830 -1.999 ETKDGv3 20
7CA O10 -5.118 -3.115 -1.341 ETKDGv3 21
7CA C17 -4.168 -0.704 -0.148 ETKDGv3 22
7CA C18 -4.421 -0.863 1.362 ETKDGv3 23
7CA C19 -5.109 0.352 2.027 ETKDGv3 24
7CA C20 -6.463 0.684 1.386 ETKDGv3 25
7CA C21 -4.200 1.590 2.065 ETKDGv3 26
7CA O5 2.358 -0.932 0.049 ETKDGv3 27
7CA C22 3.032 0.039 -0.752 ETKDGv3 28
7CA O6 2.927 -0.313 -2.128 ETKDGv3 29
7CA C23 4.494 0.207 -0.251 ETKDGv3 30
7CA O7 4.554 1.238 0.701 ETKDGv3 31
7CA C24 5.457 0.493 -1.423 ETKDGv3 32
7CA O8 5.267 1.796 -1.923 ETKDGv3 33
7CA C25 5.304 -0.571 -2.547 ETKDGv3 34
7CA O9 6.327 -1.534 -2.471 ETKDGv3 35
7CA C26 3.913 -1.258 -2.495 ETKDGv3 36
7CA C27 3.544 -1.857 -3.851 ETKDGv3 37
7CA H11 0.811 6.100 2.123 ETKDGv3 38
7CA H12 1.147 6.472 3.856 ETKDGv3 39
7CA H13 -0.386 5.632 3.413 ETKDGv3 40
7CA H3 2.500 2.193 3.566 ETKDGv3 41
7CA H4 1.944 0.064 2.334 ETKDGv3 42
7CA H5 -0.647 4.207 1.380 ETKDGv3 43
7CA H6 -1.137 2.203 0.164 ETKDGv3 44
7CA H14 -3.217 -4.871 -2.137 ETKDGv3 45
7CA HO4 -0.969 -5.676 -2.439 ETKDGv3 46
7CA HO10 -5.496 -3.958 -1.756 ETKDGv3 47
7CA H171 -3.693 0.275 -0.364 ETKDGv3 48
7CA H172 -5.133 -0.714 -0.697 ETKDGv3 49
7CA H181 -5.051 -1.765 1.522 ETKDGv3 50
7CA H182 -3.457 -1.049 1.886 ETKDGv3 51
7CA H19 -5.309 0.065 3.084 ETKDGv3 52
7CA H201 -7.100 -0.225 1.341 ETKDGv3 53
7CA H202 -6.330 1.086 0.359 ETKDGv3 54
7CA H203 -6.991 1.449 1.994 ETKDGv3 55
7CA H211 -3.205 1.328 2.485 ETKDGv3 56
7CA H212 -4.653 2.369 2.715 ETKDGv3 57
7CA H213 -4.061 2.024 1.053 ETKDGv3 58
7CA H22 2.522 1.020 -0.638 ETKDGv3 59
7CA H23 4.811 -0.751 0.226 ETKDGv3 60
7CA HO7 5.418 1.136 1.180 ETKDGv3 61
7CA H24 6.496 0.450 -1.029 ETKDGv3 62
7CA HO8 4.367 1.839 -2.339 ETKDGv3 63
7CA H25 5.417 -0.052 -3.525 ETKDGv3 64
7CA HO9 6.272 -1.961 -1.576 ETKDGv3 65
7CA H26 3.929 -2.102 -1.765 ETKDGv3 66
7CA H271 2.561 -2.369 -3.779 ETKDGv3 67
7CA H272 4.307 -2.601 -4.164 ETKDGv3 68
7CA H273 3.472 -1.060 -4.623 ETKDGv3 69
#