data_6VM
#
_chem_comp.id 6VM
_chem_comp.name (4~{S})-3-(2,2-dimethylpropyl)-4,7,7-trimethyl-4-phenyl-2,6,8,9-tetrahydropyrazolo[3,4-b]quinolin-5-one
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C24 H31 N3 O"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2016-07-05
_chem_comp.pdbx_modified_date 2018-03-09
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 377.522
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 6VM
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 5KPM
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
6VM C1 C1 C 0 1 N N N N N N 12.133 -4.874 -2.360 -3.912 -1.139 0.918 C1 6VM 1
6VM C2 C2 C 0 1 N N N N N N 11.202 -3.689 -2.143 -2.941 -1.892 1.829 C2 6VM 2
6VM C3 C3 C 0 1 N N N N N N 11.279 -6.050 -2.824 -5.019 -0.506 1.763 C3 6VM 3
6VM C4 C4 C 0 1 N N N N N N 13.262 -4.578 -3.352 -3.157 -0.042 0.163 C4 6VM 4
6VM C5 C5 C 0 1 Y N N N N N 12.800 -4.241 -4.732 -2.134 -0.672 -0.746 C5 6VM 5
6VM C6 C6 C 0 1 Y N N N N N 12.338 -3.170 -6.751 -0.216 -1.262 -1.717 C6 6VM 6
6VM C12 C7 C 0 1 N N N N N N 13.788 1.788 -9.781 5.527 -1.482 0.336 C12 6VM 7
6VM C13 C8 C 0 1 N N N N N N 15.299 0.152 -8.842 3.328 -2.317 1.190 C13 6VM 8
6VM C14 C9 C 0 1 N N N N N N 12.758 -0.023 -8.590 3.439 -1.085 -0.984 C14 6VM 9
6VM C24 C10 C 0 1 Y N N N N N 13.274 -0.853 -2.630 -0.784 2.672 0.755 C24 6VM 10
6VM C25 C11 C 0 1 Y N N N N N 12.462 -0.336 -1.600 -0.941 4.005 0.424 C25 6VM 11
6VM C26 C12 C 0 1 Y N N N N N 11.123 -0.014 -1.848 -0.472 4.475 -0.789 C26 6VM 12
6VM C27 C13 C 0 1 Y N N N N N 10.639 -0.219 -3.142 0.153 3.613 -1.670 C27 6VM 13
6VM O O1 O 0 1 N N N N N N 14.440 1.093 -4.944 1.863 1.131 2.029 O 6VM 14
6VM C9 C14 C 0 1 N N N N N N 14.072 0.725 -6.053 2.329 0.452 1.135 C9 6VM 15
6VM C8 C15 C 0 1 N N N N N N 13.547 -0.682 -6.195 1.478 -0.022 0.119 C8 6VM 16
6VM C7 C16 C 0 1 N N N N N N 12.851 -1.036 -7.471 1.963 -0.765 -0.898 C7 6VM 17
6VM C11 C17 C 0 1 N N N N N N 13.986 0.895 -8.583 4.027 -1.193 0.424 C11 6VM 18
6VM C10 C18 C 0 1 N N N N N N 14.038 1.666 -7.258 3.799 0.142 1.141 C10 6VM 19
6VM C15 C19 C 0 1 N N S N N N 13.635 -1.650 -5.053 0.017 0.358 0.239 C15 6VM 20
6VM C29 C20 C 0 1 N N N N N N 15.131 -1.882 -4.818 -0.450 0.135 1.678 C29 6VM 21
6VM C30 C21 C 0 1 Y N N N N N 12.793 -1.073 -3.922 -0.154 1.811 -0.123 C30 6VM 22
6VM C28 C22 C 0 1 Y N N N N N 11.456 -0.727 -4.170 0.310 2.280 -1.338 C28 6VM 23
6VM C23 C23 C 0 1 Y N N N N N 12.989 -2.959 -5.457 -0.806 -0.488 -0.690 C23 6VM 24
6VM C C24 C 0 1 N N N N N N 12.780 -5.201 -1.011 -4.531 -2.114 -0.085 C 6VM 25
6VM N N1 N 0 1 Y N N N N N 12.142 -5.018 -5.608 -2.388 -1.530 -1.762 N 6VM 26
6VM N1 N2 N 0 1 Y N N N N N 11.842 -4.411 -6.850 -1.165 -1.881 -2.355 N1 6VM 27
6VM N2 N3 N 0 1 N N N N N N 12.300 -2.226 -7.673 1.170 -1.271 -1.897 N2 6VM 28
6VM H1 H1 H 0 1 N N N N N N 10.417 -3.966 -1.424 -2.152 -2.342 1.227 H1 6VM 29
6VM H2 H2 H 0 1 N N N N N N 11.777 -2.838 -1.749 -2.500 -1.197 2.544 H2 6VM 30
6VM H3 H3 H 0 1 N N N N N N 10.739 -3.407 -3.100 -3.479 -2.673 2.367 H3 6VM 31
6VM H4 H4 H 0 1 N N N N N N 10.480 -6.235 -2.091 -4.578 0.189 2.478 H4 6VM 32
6VM H5 H5 H 0 1 N N N N N N 10.833 -5.816 -3.802 -5.711 0.031 1.114 H5 6VM 33
6VM H6 H6 H 0 1 N N N N N N 11.909 -6.947 -2.914 -5.557 -1.287 2.301 H6 6VM 34
6VM H7 H7 H 0 1 N N N N N N 13.908 -5.466 -3.413 -3.861 0.541 -0.431 H7 6VM 35
6VM H8 H8 H 0 1 N N N N N N 13.844 -3.728 -2.967 -2.655 0.611 0.877 H8 6VM 36
6VM H9 H9 H 0 1 N N N N N N 12.855 2.358 -9.664 5.685 -2.427 -0.184 H9 6VM 37
6VM H10 H10 H 0 1 N N N N N N 14.635 2.485 -9.863 6.021 -0.679 -0.210 H10 6VM 38
6VM H11 H11 H 0 1 N N N N N N 13.730 1.173 -10.691 5.943 -1.547 1.341 H11 6VM 39
6VM H12 H12 H 0 1 N N N N N N 15.510 -0.525 -8.001 3.742 -2.384 2.196 H12 6VM 40
6VM H13 H13 H 0 1 N N N N N N 15.213 -0.432 -9.770 2.260 -2.107 1.250 H13 6VM 41
6VM H14 H14 H 0 1 N N N N N N 16.118 0.879 -8.942 3.484 -3.263 0.670 H14 6VM 42
6VM H15 H15 H 0 1 N N N N N N 11.851 0.584 -8.455 3.575 -2.032 -1.507 H15 6VM 43
6VM H16 H16 H 0 1 N N N N N N 12.706 -0.551 -9.554 3.951 -0.293 -1.531 H16 6VM 44
6VM H17 H17 H 0 1 N N N N N N 14.305 -1.087 -2.412 -1.150 2.305 1.703 H17 6VM 45
6VM H18 H18 H 0 1 N N N N N N 12.876 -0.188 -0.614 -1.429 4.679 1.112 H18 6VM 46
6VM H19 H19 H 0 1 N N N N N N 10.488 0.378 -1.068 -0.595 5.516 -1.048 H19 6VM 47
6VM H20 H20 H 0 1 N N N N N N 9.608 0.019 -3.360 0.519 3.980 -2.617 H20 6VM 48
6VM H22 H22 H 0 1 N N N N N N 14.942 2.292 -7.246 4.341 0.933 0.623 H22 6VM 49
6VM H23 H23 H 0 1 N N N N N N 13.147 2.307 -7.184 4.152 0.069 2.170 H23 6VM 50
6VM H24 H24 H 0 1 N N N N N N 15.267 -2.589 -3.986 -0.177 0.997 2.287 H24 6VM 51
6VM H25 H25 H 0 1 N N N N N N 15.585 -2.297 -5.730 -1.533 0.009 1.693 H25 6VM 52
6VM H26 H26 H 0 1 N N N N N N 15.616 -0.926 -4.570 0.026 -0.759 2.081 H26 6VM 53
6VM H27 H27 H 0 1 N N N N N N 11.048 -0.852 -5.162 0.794 1.605 -2.028 H27 6VM 54
6VM H28 H28 H 0 1 N N N N N N 11.996 -5.420 -0.271 -5.203 -2.795 0.437 H28 6VM 55
6VM H29 H29 H 0 1 N N N N N N 13.435 -6.078 -1.121 -5.090 -1.557 -0.836 H29 6VM 56
6VM H30 H30 H 0 1 N N N N N N 13.375 -4.340 -0.671 -3.740 -2.686 -0.571 H30 6VM 57
6VM H31 H31 H 0 1 N N N N N N 11.882 -5.960 -5.397 -3.264 -1.847 -2.033 H31 6VM 58
6VM H21 H21 H 0 1 N N N N N N 11.845 -2.412 -8.544 1.563 -1.627 -2.710 H21 6VM 59
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
6VM C12 C11 SING N N 1
6VM C13 C11 SING N N 2
6VM C14 C11 SING N N 3
6VM C14 C7 SING N N 4
6VM C11 C10 SING N N 5
6VM N2 C7 SING N N 6
6VM N2 C6 SING N N 7
6VM C7 C8 DOUB N N 8
6VM C10 C9 SING N N 9
6VM N1 C6 DOUB Y N 10
6VM N1 N SING Y N 11
6VM C6 C23 SING Y N 12
6VM C8 C9 SING N N 13
6VM C8 C15 SING N N 14
6VM C9 O DOUB N N 15
6VM N C5 SING Y N 16
6VM C23 C15 SING N N 17
6VM C23 C5 DOUB Y N 18
6VM C15 C29 SING N N 19
6VM C15 C30 SING N N 20
6VM C5 C4 SING N N 21
6VM C28 C30 DOUB Y N 22
6VM C28 C27 SING Y N 23
6VM C30 C24 SING Y N 24
6VM C4 C1 SING N N 25
6VM C27 C26 DOUB Y N 26
6VM C3 C1 SING N N 27
6VM C24 C25 DOUB Y N 28
6VM C1 C2 SING N N 29
6VM C1 C SING N N 30
6VM C26 C25 SING Y N 31
6VM C2 H1 SING N N 32
6VM C2 H2 SING N N 33
6VM C2 H3 SING N N 34
6VM C3 H4 SING N N 35
6VM C3 H5 SING N N 36
6VM C3 H6 SING N N 37
6VM C4 H7 SING N N 38
6VM C4 H8 SING N N 39
6VM C12 H9 SING N N 40
6VM C12 H10 SING N N 41
6VM C12 H11 SING N N 42
6VM C13 H12 SING N N 43
6VM C13 H13 SING N N 44
6VM C13 H14 SING N N 45
6VM C14 H15 SING N N 46
6VM C14 H16 SING N N 47
6VM C24 H17 SING N N 48
6VM C25 H18 SING N N 49
6VM C26 H19 SING N N 50
6VM C27 H20 SING N N 51
6VM C10 H22 SING N N 52
6VM C10 H23 SING N N 53
6VM C29 H24 SING N N 54
6VM C29 H25 SING N N 55
6VM C29 H26 SING N N 56
6VM C28 H27 SING N N 57
6VM C H28 SING N N 58
6VM C H29 SING N N 59
6VM C H30 SING N N 60
6VM N H31 SING N N 61
6VM N2 H21 SING N N 62
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
6VM InChI InChI 1.03 InChI=1S/C24H31N3O/c1-22(2,3)12-17-20-21(27-26-17)25-16-13-23(4,5)14-18(28)19(16)24(20,6)15-10-8-7-9-11-15/h7-11H,12-14H2,1-6H3,(H2,25,26,27)/t24-/m1/s1
6VM InChIKey InChI 1.03 YZRXTIGAQRIAEX-XMMPIXPASA-N
6VM SMILES_CANONICAL CACTVS 3.385 CC(C)(C)Cc1[nH]nc2NC3=C(C(=O)CC(C)(C)C3)[C@@](C)(c4ccccc4)c12
6VM SMILES CACTVS 3.385 CC(C)(C)Cc1[nH]nc2NC3=C(C(=O)CC(C)(C)C3)[C](C)(c4ccccc4)c12
6VM SMILES_CANONICAL "OpenEye OEToolkits" 2.0.5 C[C@@]1(c2c([nH]nc2NC3=C1C(=O)CC(C3)(C)C)CC(C)(C)C)c4ccccc4
6VM SMILES "OpenEye OEToolkits" 2.0.5 CC1(CC2=C(C(=O)C1)C(c3c([nH]nc3N2)CC(C)(C)C)(C)c4ccccc4)C
#
_pdbx_chem_comp_identifier.comp_id 6VM
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.5
_pdbx_chem_comp_identifier.identifier
(4~{S})-3-(2,2-dimethylpropyl)-4,7,7-trimethyl-4-phenyl-2,6,8,9-tetrahydropyrazolo[3,4-b]quinolin-5-one
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
6VM 'Create component' 2016-07-05 RCSB
6VM 'Other modification' 2016-07-05 RCSB
6VM 'Initial release' 2018-03-14 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
6VM C1 C 13.151 1.289 1
6VM C2 C 12.842 2.757 2
6VM C3 C 14.619 1.599 3
6VM C4 C 11.683 0.980 4
6VM C5 C 11.217 -0.446 5
6VM C6 C 9.798 -2.403 6
6VM C12 C 3.000 -2.440 7
6VM C13 C 3.755 -3.736 8
6VM C14 C 5.859 -3.205 9
6VM C24 C 8.499 2.445 10
6VM C25 C 9.249 3.744 11
6VM C26 C 10.749 3.744 12
6VM C27 C 11.499 2.445 13
6VM O O 5.876 1.399 14
6VM C9 C 5.859 -0.101 15
6VM C8 C 7.200 -0.903 16
6VM C7 C 7.200 -2.403 17
6VM C11 C 4.500 -2.434 18
6VM C10 C 4.500 -0.872 19
6VM C15 C 8.499 -0.153 20
6VM C29 C 7.749 1.146 21
6VM C30 C 9.249 1.146 22
6VM C28 C 10.749 1.146 23
6VM C23 C 9.798 -0.903 24
6VM C C 13.460 -0.178 25
6VM N N 12.093 -1.653 26
6VM N1 N 11.217 -2.860 27
6VM N2 N 8.499 -3.153 28
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
6VM C12 C11 SINGLE NONE 1
6VM C13 C11 SINGLE NONE 2
6VM C14 C11 SINGLE NONE 3
6VM C14 C7 SINGLE NONE 4
6VM C11 C10 SINGLE NONE 5
6VM N2 C7 SINGLE NONE 6
6VM N2 C6 SINGLE NONE 7
6VM C7 C8 DOUBLE NONE 8
6VM C10 C9 SINGLE NONE 9
6VM N1 C6 DOUBLE NONE 10
6VM N1 N SINGLE NONE 11
6VM C6 C23 SINGLE NONE 12
6VM C8 C9 SINGLE NONE 13
6VM C8 C15 SINGLE NONE 14
6VM C9 O DOUBLE NONE 15
6VM N C5 SINGLE NONE 16
6VM C23 C15 SINGLE NONE 17
6VM C23 C5 DOUBLE NONE 18
6VM C15 C29 SINGLE BEGINDASH 19
6VM C15 C30 SINGLE NONE 20
6VM C5 C4 SINGLE NONE 21
6VM C28 C30 SINGLE NONE 22
6VM C28 C27 DOUBLE NONE 23
6VM C30 C24 DOUBLE NONE 24
6VM C4 C1 SINGLE NONE 25
6VM C27 C26 SINGLE NONE 26
6VM C3 C1 SINGLE NONE 27
6VM C24 C25 SINGLE NONE 28
6VM C1 C2 SINGLE NONE 29
6VM C1 C SINGLE NONE 30
6VM C26 C25 DOUBLE NONE 31
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
6VM MurckoScaffold S1 scaffold 'O=C1CCCC2=C1C(c1ccccc1)c1c[nH]nc1N2' InChI=1S/C16H15N3O/c20-13-8-4-7-12-15(13)14(10-5-2-1-3-6-10)11-9-17-19-16(11)18-12/h1-3,5-6,9,14H,4,7-8H2,(H2,17,18,19)/t14-/m0/s1 VQQDWKKCRQUERU-AWEZNQCLSA-N
6VM phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
6VM pyrazole F2 fragment 'c1cn[nH]c1' InChI=1S/C3H4N2/c1-2-4-5-3-1/h1-3H,(H,4,5) WTKZEGDFNFYCGP-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
6VM C5 S1 1
6VM C6 S1 1
6VM C14 S1 1
6VM C24 S1 1
6VM C25 S1 1
6VM C26 S1 1
6VM C27 S1 1
6VM O S1 1
6VM C9 S1 1
6VM C8 S1 1
6VM C7 S1 1
6VM C11 S1 1
6VM C10 S1 1
6VM C15 S1 1
6VM C30 S1 1
6VM C28 S1 1
6VM C23 S1 1
6VM N S1 1
6VM N1 S1 1
6VM N2 S1 1
6VM C24 F1 1
6VM C30 F1 1
6VM C28 F1 1
6VM C27 F1 1
6VM C26 F1 1
6VM C25 F1 1
6VM C5 F2 1
6VM C23 F2 1
6VM C6 F2 1
6VM N1 F2 1
6VM N F2 1
#
_pdbe_chem_comp_rdkit_properties.comp_id 6VM
_pdbe_chem_comp_rdkit_properties.exactmw 377.247
_pdbe_chem_comp_rdkit_properties.amw 377.532
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 4
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 5
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 3
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 28
_pdbe_chem_comp_rdkit_properties.NumAtoms 59
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 4
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.500
_pdbe_chem_comp_rdkit_properties.NumRings 4
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 1
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 211.040
_pdbe_chem_comp_rdkit_properties.tpsa 57.780
_pdbe_chem_comp_rdkit_properties.CrippenClogP 4.828
_pdbe_chem_comp_rdkit_properties.CrippenMR 111.691
_pdbe_chem_comp_rdkit_properties.chi0v 13.750
_pdbe_chem_comp_rdkit_properties.chi1v 7.549
_pdbe_chem_comp_rdkit_properties.chi2v 3.925
_pdbe_chem_comp_rdkit_properties.chi3v 3.925
_pdbe_chem_comp_rdkit_properties.chi4v 2.954
_pdbe_chem_comp_rdkit_properties.chi0n 44.750
_pdbe_chem_comp_rdkit_properties.chi1n 22.943
_pdbe_chem_comp_rdkit_properties.chi2n 3.925
_pdbe_chem_comp_rdkit_properties.chi3n 3.925
_pdbe_chem_comp_rdkit_properties.chi4n 2.954
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.360
_pdbe_chem_comp_rdkit_properties.kappa1 4.376
_pdbe_chem_comp_rdkit_properties.kappa2 6.067
_pdbe_chem_comp_rdkit_properties.kappa3 2.992
_pdbe_chem_comp_rdkit_properties.Phi 0.948
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
6VM UniChem PubChem 135567205
6VM UniChem MedChemExpress HY-124607B
6VM UniChem 'Probes And Drugs' PD127885
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
6VM C1 4.131 -0.543 0.148 ETKDGv3 1
6VM C2 3.711 0.050 -1.211 ETKDGv3 2
6VM C3 4.918 -1.846 -0.109 ETKDGv3 3
6VM C4 2.879 -0.893 1.010 ETKDGv3 4
6VM C5 1.982 0.278 1.343 ETKDGv3 5
6VM C6 0.293 1.638 1.731 ETKDGv3 6
6VM C12 -5.799 1.926 0.151 ETKDGv3 7
6VM C13 -4.763 0.246 1.698 ETKDGv3 8
6VM C14 -3.356 2.126 0.723 ETKDGv3 9
6VM C24 0.341 0.207 -1.978 ETKDGv3 10
6VM C25 0.773 -0.093 -3.358 ETKDGv3 11
6VM C26 1.020 -1.355 -3.723 ETKDGv3 12
6VM C27 0.866 -2.448 -2.745 ETKDGv3 13
6VM O -2.572 -1.441 -1.220 ETKDGv3 14
6VM C9 -2.790 -0.358 -0.614 ETKDGv3 15
6VM C8 -1.711 0.293 0.199 ETKDGv3 16
6VM C7 -2.010 1.450 0.873 ETKDGv3 17
6VM C11 -4.511 1.135 0.457 ETKDGv3 18
6VM C10 -4.144 0.272 -0.766 ETKDGv3 19
6VM C15 -0.337 -0.432 0.335 ETKDGv3 20
6VM C29 -0.576 -1.663 1.244 ETKDGv3 21
6VM C30 0.184 -0.779 -1.067 ETKDGv3 22
6VM C28 0.472 -2.183 -1.494 ETKDGv3 23
6VM C23 0.689 0.452 1.027 ETKDGv3 24
6VM C 5.062 0.453 0.870 ETKDGv3 25
6VM N 2.358 1.325 2.238 ETKDGv3 26
6VM N1 1.243 2.142 2.440 ETKDGv3 27
6VM N2 -1.032 2.131 1.679 ETKDGv3 28
6VM H1 3.114 -0.687 -1.783 ETKDGv3 29
6VM H2 4.605 0.310 -1.818 ETKDGv3 30
6VM H3 3.108 0.973 -1.074 ETKDGv3 31
6VM H4 5.260 -2.291 0.850 ETKDGv3 32
6VM H5 5.813 -1.651 -0.740 ETKDGv3 33
6VM H6 4.284 -2.593 -0.634 ETKDGv3 34
6VM H7 3.207 -1.347 1.970 ETKDGv3 35
6VM H8 2.302 -1.673 0.480 ETKDGv3 36
6VM H9 -6.642 1.233 -0.060 ETKDGv3 37
6VM H10 -5.659 2.583 -0.735 ETKDGv3 38
6VM H11 -6.080 2.566 1.016 ETKDGv3 39
6VM H12 -5.030 0.872 2.577 ETKDGv3 40
6VM H13 -5.599 -0.461 1.508 ETKDGv3 41
6VM H14 -3.864 -0.350 1.963 ETKDGv3 42
6VM H15 -3.582 2.714 1.640 ETKDGv3 43
6VM H16 -3.277 2.849 -0.119 ETKDGv3 44
6VM H17 0.138 1.238 -1.715 ETKDGv3 45
6VM H18 0.889 0.711 -4.072 ETKDGv3 46
6VM H19 1.338 -1.576 -4.734 ETKDGv3 47
6VM H20 1.073 -3.467 -3.045 ETKDGv3 48
6VM H22 -4.911 -0.519 -0.917 ETKDGv3 49
6VM H23 -4.123 0.900 -1.684 ETKDGv3 50
6VM H24 0.358 -2.223 1.448 ETKDGv3 51
6VM H25 -0.986 -1.339 2.225 ETKDGv3 52
6VM H26 -1.305 -2.368 0.793 ETKDGv3 53
6VM H27 0.372 -3.010 -0.805 ETKDGv3 54
6VM H28 5.274 0.112 1.906 ETKDGv3 55
6VM H29 4.616 1.468 0.902 ETKDGv3 56
6VM H30 6.031 0.545 0.331 ETKDGv3 57
6VM H31 3.232 1.384 2.805 ETKDGv3 58
6VM H21 -1.279 3.003 2.198 ETKDGv3 59
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