data_62S
#
_chem_comp.id 62S
_chem_comp.name
"[(2~{S})-3-[[(2~{S})-1-azanyl-1-oxidanylidene-3-phenyl-propan-2-yl]amino]-2-[[3-(2-hydroxyphenyl)-1,2-oxazol-5-yl]methyl]-3-oxidanylidene-propyl]-[(1~{R})-1-azanyl-3-phenyl-propyl]phosphinic acid"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C31 H35 N4 O6 P"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2021-07-23
_chem_comp.pdbx_modified_date 2022-01-21
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 590.607
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 62S
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 7P7P
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBE
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
62S C15 C1 C 0 1 N N S N N N 21.080 2.146 2.977 0.019 -1.659 -0.781 C15 62S 1
62S C17 C2 C 0 1 Y N N N N N 23.328 1.793 2.025 2.488 -1.888 -0.794 C17 62S 2
62S C22 C3 C 0 1 Y N N N N N 26.945 1.331 2.582 5.357 -1.114 1.298 C22 62S 3
62S C24 C4 C 0 1 Y N N N N N 28.863 0.043 2.434 7.420 -0.103 2.020 C24 62S 4
62S C26 C5 C 0 1 Y N N N N N 29.027 2.381 3.118 6.293 -1.677 3.436 C26 62S 5
62S C01 C6 C 0 1 Y N N N N N 15.341 2.628 3.165 -6.655 0.239 0.546 C01 62S 6
62S C02 C7 C 0 1 Y N N N N N 14.900 2.740 4.494 -6.399 0.916 1.724 C02 62S 7
62S C03 C8 C 0 1 Y N N N N N 14.028 1.776 5.007 -7.434 1.519 2.414 C03 62S 8
62S C04 C9 C 0 1 Y N N N N N 13.576 0.713 4.153 -8.725 1.444 1.927 C04 62S 9
62S C05 C10 C 0 1 Y N N N N N 14.007 0.642 2.800 -8.982 0.767 0.749 C05 62S 10
62S C06 C11 C 0 1 Y N N N N N 14.881 1.599 2.289 -7.947 0.165 0.059 C06 62S 11
62S C07 C12 C 0 1 N N N N N N 16.194 3.699 2.642 -5.526 -0.412 -0.210 C07 62S 12
62S C08 C13 C 0 1 N N N N N N 17.713 3.601 2.424 -5.348 -1.851 0.279 C08 62S 13
62S C09 C14 C 0 1 N N R N N N 18.306 4.931 1.932 -4.201 -2.512 -0.488 C09 62S 14
62S C14 C15 C 0 1 N N N N N N 20.973 3.632 3.042 -1.295 -2.366 -1.118 C14 62S 15
62S C16 C16 C 0 1 N N N N N N 21.837 1.716 1.675 1.195 -2.526 -1.235 C16 62S 16
62S C18 C17 C 0 1 Y N N N N N 24.442 1.012 1.701 3.137 -2.102 0.373 C18 62S 17
62S C19 C18 C 0 1 Y N N N N N 25.495 1.609 2.493 4.288 -1.270 0.282 C19 62S 18
62S C23 C19 C 0 1 Y N N N N N 27.499 0.130 2.317 6.429 -0.247 1.063 C23 62S 19
62S C25 C20 C 0 1 Y N N N N N 29.620 1.185 2.843 7.349 -0.814 3.203 C25 62S 20
62S C27 C21 C 0 1 Y N N N N N 27.679 2.470 2.969 5.295 -1.826 2.494 C27 62S 21
62S C29 C22 C 0 1 N N N N N N 21.379 1.259 4.166 0.070 -0.331 -1.491 C29 62S 22
62S C32 C23 C 0 1 N N S N N N 22.263 -1.041 4.942 1.193 1.763 -2.032 C32 62S 23
62S C33 C24 C 0 1 N N N N N N 23.637 -1.653 4.903 1.717 1.565 -3.431 C33 62S 24
62S C36 C25 C 0 1 N N N N N N 21.245 -2.144 4.709 2.119 2.713 -1.270 C36 62S 25
62S C37 C26 C 0 1 Y N N N N N 19.814 -1.572 4.483 1.531 3.008 0.086 C37 62S 26
62S C38 C27 C 0 1 Y N N N N N 19.363 -1.345 3.172 0.671 4.079 0.248 C38 62S 27
62S C39 C28 C 0 1 Y N N N N N 18.113 -0.777 2.922 0.132 4.350 1.492 C39 62S 28
62S C40 C29 C 0 1 Y N N N N N 17.269 -0.411 3.978 0.452 3.550 2.573 C40 62S 29
62S C41 C30 C 0 1 Y N N N N N 17.697 -0.622 5.292 1.311 2.479 2.410 C41 62S 30
62S C42 C31 C 0 1 Y N N N N N 18.970 -1.200 5.557 1.847 2.205 1.166 C42 62S 31
62S N10 N1 N 0 1 N N N N N N 17.610 5.712 0.921 -4.030 -3.894 -0.019 N10 62S 32
62S N20 N2 N 0 1 Y N N N N N 25.035 2.606 3.295 4.212 -0.670 -0.880 N20 62S 33
62S N31 N3 N 0 1 N N N N N N 22.041 -0.059 3.918 1.143 0.472 -1.342 N31 62S 34
62S N35 N4 N 0 1 N N N N N N 24.284 -1.794 6.210 1.850 2.622 -4.257 N35 62S 35
62S O12 O1 O 0 1 N N N N N N 20.768 5.615 1.158 -2.348 -1.573 1.243 O12 62S 36
62S O13 O2 O 0 1 N N N N N N 19.633 3.491 0.333 -2.849 -0.065 -0.718 O13 62S 37
62S O21 O3 O 0 1 Y N N N N N 23.717 2.636 2.976 3.220 -1.003 -1.486 O21 62S 38
62S O28 O4 O 0 1 N N N N N N 26.687 -0.951 1.900 6.498 0.451 -0.100 O28 62S 39
62S O30 O5 O 0 1 N N N N N N 20.919 1.606 5.248 -0.853 0.016 -2.197 O30 62S 40
62S O34 O6 O 0 1 N N N N N N 24.115 -2.031 3.818 2.019 0.455 -3.814 O34 62S 41
62S P11 P1 P 0 1 N N N N N N 20.011 4.402 1.560 -2.661 -1.579 -0.204 P11 62S 42
62S H151 H1 H 0 0 N N N N N N 20.048 1.854 2.734 0.079 -1.498 0.295 H151 62S 43
62S H241 H2 H 0 0 N N N N N N 29.365 -0.888 2.217 8.248 0.568 1.843 H241 62S 44
62S H261 H3 H 0 0 N N N N N N 29.609 3.230 3.444 6.244 -2.230 4.363 H261 62S 45
62S H021 H4 H 0 0 N N N N N N 15.231 3.561 5.112 -5.390 0.974 2.105 H021 62S 46
62S H031 H5 H 0 0 N N N N N N 13.698 1.830 6.034 -7.234 2.047 3.335 H031 62S 47
62S H041 H6 H 0 0 N N N N N N 12.904 -0.038 4.542 -9.534 1.914 2.467 H041 62S 48
62S H051 H7 H 0 0 N N N N N N 13.655 -0.158 2.165 -9.991 0.708 0.369 H051 62S 49
62S H061 H8 H 0 0 N N N N N N 15.202 1.563 1.258 -8.147 -0.364 -0.861 H061 62S 50
62S H072 H9 H 0 0 N N N N N N 16.052 4.546 3.329 -5.757 -0.416 -1.275 H072 62S 51
62S H071 H10 H 0 0 N N N N N N 15.774 3.951 1.657 -4.605 0.146 -0.040 H071 62S 52
62S H081 H11 H 0 0 N N N N N N 17.916 2.822 1.674 -5.117 -1.847 1.344 H081 62S 53
62S H082 H12 H 0 0 N N N N N N 18.192 3.328 3.376 -6.268 -2.409 0.109 H082 62S 54
62S H091 H13 H 0 0 N N N N N N 18.418 5.569 2.821 -4.432 -2.516 -1.554 H091 62S 55
62S H142 H14 H 0 0 N N N N N N 21.989 4.054 3.054 -1.484 -2.292 -2.189 H142 62S 56
62S H141 H15 H 0 0 N N N N N N 20.453 3.903 3.973 -1.226 -3.417 -0.834 H141 62S 57
62S H161 H16 H 0 0 N N N N N N 21.600 2.402 0.848 1.109 -3.517 -0.790 H161 62S 58
62S H162 H17 H 0 0 N N N N N N 21.561 0.690 1.391 1.185 -2.613 -2.321 H162 62S 59
62S H181 H18 H 0 0 N N N N N N 24.501 0.171 1.026 2.848 -2.753 1.185 H181 62S 60
62S H251 H19 H 0 0 N N N N N N 30.692 1.097 2.937 8.122 -0.696 3.948 H251 62S 61
62S H271 H20 H 0 0 N N N N N N 27.174 3.408 3.146 4.468 -2.493 2.684 H271 62S 62
62S H321 H21 H 0 0 N N N N N N 22.092 -0.599 5.935 0.191 2.191 -2.076 H321 62S 63
62S H362 H22 H 0 0 N N N N N N 21.229 -2.806 5.588 3.097 2.247 -1.148 H362 62S 64
62S H361 H23 H 0 0 N N N N N N 21.542 -2.721 3.821 2.227 3.642 -1.829 H361 62S 65
62S H381 H24 H 0 0 N N N N N N 19.997 -1.616 2.340 0.421 4.703 -0.597 H381 62S 66
62S H391 H25 H 0 0 N N N N N N 17.793 -0.618 1.903 -0.539 5.187 1.619 H391 62S 67
62S H401 H26 H 0 0 N N N N N N 16.302 0.028 3.780 0.032 3.762 3.545 H401 62S 68
62S H411 H27 H 0 0 N N N N N N 17.055 -0.343 6.114 1.561 1.855 3.255 H411 62S 69
62S H421 H28 H 0 0 N N N N N N 19.292 -1.355 6.576 2.514 1.366 1.038 H421 62S 70
62S H101 H29 H 0 0 N N N N N N 16.691 5.936 1.246 -3.816 -3.916 0.967 H101 62S 71
62S H1 H30 H 0 1 N N N N N N 18.116 6.556 0.745 -4.847 -4.449 -0.224 H1 62S 72
62S H311 H32 H 0 0 N N N N N N 22.346 -0.268 2.989 1.881 0.195 -0.777 H311 62S 73
62S H352 H33 H 0 0 N N N N N N 25.184 -2.224 6.278 1.609 3.510 -3.950 H352 62S 74
62S H351 H34 H 0 0 N N N N N N 23.825 -1.460 7.034 2.188 2.494 -5.157 H351 62S 75
62S H131 H35 H 0 0 N N N N N N 19.962 3.884 -0.467 -3.057 0.008 -1.660 H131 62S 76
62S H281 H36 H 0 0 N N N N N N 25.777 -0.678 1.888 6.971 -0.008 -0.807 H281 62S 77
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
62S O13 P11 SING N N 1
62S N10 C09 SING N N 2
62S O12 P11 DOUB N N 3
62S P11 C09 SING N N 4
62S P11 C14 SING N N 5
62S C16 C17 SING N N 6
62S C16 C15 SING N N 7
62S C18 C17 DOUB Y N 8
62S C18 C19 SING Y N 9
62S O28 C23 SING N N 10
62S C09 C08 SING N N 11
62S C17 O21 SING Y N 12
62S C06 C05 DOUB Y N 13
62S C06 C01 SING Y N 14
62S C23 C24 DOUB Y N 15
62S C23 C22 SING Y N 16
62S C08 C07 SING N N 17
62S C24 C25 SING Y N 18
62S C19 C22 SING N N 19
62S C19 N20 DOUB Y N 20
62S C22 C27 DOUB Y N 21
62S C07 C01 SING N N 22
62S C05 C04 SING Y N 23
62S C25 C26 DOUB Y N 24
62S C39 C38 DOUB Y N 25
62S C39 C40 SING Y N 26
62S C27 C26 SING Y N 27
62S O21 N20 SING Y N 28
62S C15 C14 SING N N 29
62S C15 C29 SING N N 30
62S C01 C02 DOUB Y N 31
62S C38 C37 SING Y N 32
62S O34 C33 DOUB N N 33
62S N31 C29 SING N N 34
62S N31 C32 SING N N 35
62S C40 C41 DOUB Y N 36
62S C04 C03 DOUB Y N 37
62S C29 O30 DOUB N N 38
62S C37 C36 SING N N 39
62S C37 C42 DOUB Y N 40
62S C02 C03 SING Y N 41
62S C36 C32 SING N N 42
62S C33 C32 SING N N 43
62S C33 N35 SING N N 44
62S C41 C42 SING Y N 45
62S C15 H151 SING N N 46
62S C24 H241 SING N N 47
62S C26 H261 SING N N 48
62S C02 H021 SING N N 49
62S C03 H031 SING N N 50
62S C04 H041 SING N N 51
62S C05 H051 SING N N 52
62S C06 H061 SING N N 53
62S C07 H072 SING N N 54
62S C07 H071 SING N N 55
62S C08 H081 SING N N 56
62S C08 H082 SING N N 57
62S C09 H091 SING N N 58
62S C14 H142 SING N N 59
62S C14 H141 SING N N 60
62S C16 H161 SING N N 61
62S C16 H162 SING N N 62
62S C18 H181 SING N N 63
62S C25 H251 SING N N 64
62S C27 H271 SING N N 65
62S C32 H321 SING N N 66
62S C36 H362 SING N N 67
62S C36 H361 SING N N 68
62S C38 H381 SING N N 69
62S C39 H391 SING N N 70
62S C40 H401 SING N N 71
62S C41 H411 SING N N 72
62S C42 H421 SING N N 73
62S N10 H101 SING N N 74
62S N10 H1 SING N N 75
62S N31 H311 SING N N 76
62S N35 H352 SING N N 77
62S N35 H351 SING N N 78
62S O13 H131 SING N N 79
62S O28 H281 SING N N 80
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
62S InChI InChI 1.03 InChI=1S/C31H35N4O6P/c32-29(16-15-21-9-3-1-4-10-21)42(39,40)20-23(18-24-19-26(35-41-24)25-13-7-8-14-28(25)36)31(38)34-27(30(33)37)17-22-11-5-2-6-12-22/h1-14,19,23,27,29,36H,15-18,20,32H2,(H2,33,37)(H,34,38)(H,39,40)/t23-,27+,29-/m1/s1
62S InChIKey InChI 1.03 GSWUIYHGTPVQDP-FNHKZSGOSA-N
62S SMILES_CANONICAL CACTVS 3.385 N[C@@H](CCc1ccccc1)[P](O)(=O)C[C@@H](Cc2onc(c2)c3ccccc3O)C(=O)N[C@@H](Cc4ccccc4)C(N)=O
62S SMILES CACTVS 3.385 N[CH](CCc1ccccc1)[P](O)(=O)C[CH](Cc2onc(c2)c3ccccc3O)C(=O)N[CH](Cc4ccccc4)C(N)=O
62S SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 c1ccc(cc1)CC[C@H](N)P(=O)(C[C@@H](Cc2cc(no2)c3ccccc3O)C(=O)N[C@@H](Cc4ccccc4)C(=O)N)O
62S SMILES "OpenEye OEToolkits" 2.0.7 c1ccc(cc1)CCC(N)P(=O)(CC(Cc2cc(no2)c3ccccc3O)C(=O)NC(Cc4ccccc4)C(=O)N)O
#
_pdbx_chem_comp_identifier.comp_id 62S
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.7
_pdbx_chem_comp_identifier.identifier
"[(2~{S})-3-[[(2~{S})-1-azanyl-1-oxidanylidene-3-phenyl-propan-2-yl]amino]-2-[[3-(2-hydroxyphenyl)-1,2-oxazol-5-yl]methyl]-3-oxidanylidene-propyl]-[(1~{R})-1-azanyl-3-phenyl-propyl]phosphinic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
62S 'Create component' 2021-07-23 PDBE
62S 'Initial release' 2022-01-26 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
62S C15 C 7.750 0.057 1
62S C17 C 7.479 -2.527 2
62S C22 C 6.729 -6.335 3
62S C24 C 5.430 -8.585 4
62S C26 C 8.028 -8.585 5
62S C01 C 6.192 6.752 6
62S C02 C 5.582 8.122 7
62S C03 C 6.463 9.335 8
62S C04 C 7.955 9.178 9
62S C05 C 8.565 7.808 10
62S C06 C 7.684 6.595 11
62S C07 C 5.310 5.538 12
62S C08 C 5.920 4.168 13
62S C09 C 5.038 2.954 14
62S C14 C 6.259 0.214 15
62S C16 C 8.361 -1.313 16
62S C18 C 7.942 -3.954 17
62S C19 C 6.729 -4.835 18
62S C23 C 5.430 -7.085 19
62S C25 C 6.729 -9.335 20
62S C27 C 8.028 -7.085 21
62S C29 C 8.632 1.270 22
62S C32 C 11.005 2.327 23
62S C33 C 10.396 3.697 24
62S C36 C 12.497 2.170 25
62S C37 C 13.107 0.800 26
62S C38 C 12.226 -0.414 27
62S C39 C 12.836 -1.784 28
62S C40 C 14.328 -1.941 29
62S C41 C 15.209 -0.727 30
62S C42 C 14.599 0.643 31
62S N10 N 3.547 3.111 32
62S N20 N 5.515 -3.954 33
62S N31 N 10.124 1.113 34
62S N35 N 11.277 4.911 35
62S O12 O 7.019 2.194 36
62S O13 O 4.278 0.974 37
62S O21 O 5.979 -2.527 38
62S O28 O 4.131 -6.335 39
62S O30 O 8.022 2.641 40
62S O34 O 8.904 3.854 41
62S P11 P 5.649 1.584 42
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
62S P11 O13 SINGLE BEGINDASH 1
62S C09 N10 SINGLE BEGINWEDGE 2
62S O12 P11 DOUBLE NONE 3
62S P11 C09 SINGLE NONE 4
62S P11 C14 SINGLE NONE 5
62S C16 C17 SINGLE NONE 6
62S C15 C16 SINGLE BEGINDASH 7
62S C18 C17 DOUBLE NONE 8
62S C18 C19 SINGLE NONE 9
62S O28 C23 SINGLE NONE 10
62S C09 C08 SINGLE NONE 11
62S C17 O21 SINGLE NONE 12
62S C06 C05 DOUBLE NONE 13
62S C06 C01 SINGLE NONE 14
62S C23 C24 DOUBLE NONE 15
62S C23 C22 SINGLE NONE 16
62S C08 C07 SINGLE NONE 17
62S C24 C25 SINGLE NONE 18
62S C19 C22 SINGLE NONE 19
62S C19 N20 DOUBLE NONE 20
62S C22 C27 DOUBLE NONE 21
62S C07 C01 SINGLE NONE 22
62S C05 C04 SINGLE NONE 23
62S C25 C26 DOUBLE NONE 24
62S C39 C38 DOUBLE NONE 25
62S C39 C40 SINGLE NONE 26
62S C27 C26 SINGLE NONE 27
62S O21 N20 SINGLE NONE 28
62S C15 C14 SINGLE NONE 29
62S C15 C29 SINGLE NONE 30
62S C01 C02 DOUBLE NONE 31
62S C38 C37 SINGLE NONE 32
62S O34 C33 DOUBLE NONE 33
62S N31 C29 SINGLE NONE 34
62S N31 C32 SINGLE NONE 35
62S C40 C41 DOUBLE NONE 36
62S C04 C03 DOUBLE NONE 37
62S C29 O30 DOUBLE NONE 38
62S C37 C36 SINGLE NONE 39
62S C37 C42 DOUBLE NONE 40
62S C02 C03 SINGLE NONE 41
62S C32 C36 SINGLE BEGINDASH 42
62S C33 C32 SINGLE NONE 43
62S C33 N35 SINGLE NONE 44
62S C41 C42 SINGLE NONE 45
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
62S MurckoScaffold S1 scaffold 'O=C(NCCc1ccccc1)[C@H](Cc1cc(-c2ccccc2)no1)C[PH](=O)CCCc1ccccc1' InChI=1S/C30H33N2O3P/c33-30(31-19-18-25-13-6-2-7-14-25)27(23-36(34)20-10-15-24-11-4-1-5-12-24)21-28-22-29(32-35-28)26-16-8-3-9-17-26/h1-9,11-14,16-17,22,27,36H,10,15,18-21,23H2,(H,31,33)/t27-/m1/s1 KHIBTLJCUJKUST-HHHXNRCGSA-N
62S amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
62S isoxazole F2 fragment c1cnoc1 InChI=1S/C3H3NO/c1-2-4-5-3-1/h1-3H CTAPFRYPJLPFDF-UHFFFAOYSA-N
62S peptide F3 fragment NCC=O InChI=1S/C2H5NO/c3-1-2-4/h2H,1,3H2 LYIIBVSRGJSHAV-UHFFFAOYSA-N
62S phenyl F4 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
62S C15 S1 1
62S C17 S1 1
62S C22 S1 1
62S C24 S1 1
62S C26 S1 1
62S C01 S1 1
62S C02 S1 1
62S C03 S1 1
62S C04 S1 1
62S C05 S1 1
62S C06 S1 1
62S C07 S1 1
62S C08 S1 1
62S C09 S1 1
62S C14 S1 1
62S C16 S1 1
62S C18 S1 1
62S C19 S1 1
62S C23 S1 1
62S C25 S1 1
62S C27 S1 1
62S C29 S1 1
62S C32 S1 1
62S C36 S1 1
62S C37 S1 1
62S C38 S1 1
62S C39 S1 1
62S C40 S1 1
62S C41 S1 1
62S C42 S1 1
62S N20 S1 1
62S N31 S1 1
62S O12 S1 1
62S O21 S1 1
62S O30 S1 1
62S P11 S1 1
62S N31 F1 1
62S C29 F1 1
62S O30 F1 1
62S C15 F1 1
62S N35 F1 2
62S C33 F1 2
62S O34 F1 2
62S C32 F1 2
62S C17 F2 1
62S C18 F2 1
62S C19 F2 1
62S N20 F2 1
62S O21 F2 1
62S O34 F3 1
62S C33 F3 1
62S C32 F3 1
62S N31 F3 1
62S C22 F4 1
62S C23 F4 1
62S C24 F4 1
62S C25 F4 1
62S C26 F4 1
62S C27 F4 1
62S C01 F4 2
62S C06 F4 2
62S C05 F4 2
62S C04 F4 2
62S C03 F4 2
62S C02 F4 2
62S C37 F4 3
62S C38 F4 3
62S C39 F4 3
62S C40 F4 3
62S C41 F4 3
62S C42 F4 3
#
_pdbe_chem_comp_rdkit_properties.comp_id 62S
_pdbe_chem_comp_rdkit_properties.exactmw 590.229
_pdbe_chem_comp_rdkit_properties.amw 590.617
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 10
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 7
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 17
_pdbe_chem_comp_rdkit_properties.NumHBD 5
_pdbe_chem_comp_rdkit_properties.NumHBA 8
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 42
_pdbe_chem_comp_rdkit_properties.NumAtoms 77
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 11
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 2
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.258
_pdbe_chem_comp_rdkit_properties.NumRings 4
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 4
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 4
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 293.372
_pdbe_chem_comp_rdkit_properties.tpsa 181.770
_pdbe_chem_comp_rdkit_properties.CrippenClogP 2.600
_pdbe_chem_comp_rdkit_properties.CrippenMR 156.770
_pdbe_chem_comp_rdkit_properties.chi0v 21.080
_pdbe_chem_comp_rdkit_properties.chi1v 12.304
_pdbe_chem_comp_rdkit_properties.chi2v 5.486
_pdbe_chem_comp_rdkit_properties.chi3v 5.486
_pdbe_chem_comp_rdkit_properties.chi4v 3.294
_pdbe_chem_comp_rdkit_properties.chi0n 55.186
_pdbe_chem_comp_rdkit_properties.chi1n 27.732
_pdbe_chem_comp_rdkit_properties.chi2n 4.299
_pdbe_chem_comp_rdkit_properties.chi3n 4.299
_pdbe_chem_comp_rdkit_properties.chi4n 2.539
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -4.240
_pdbe_chem_comp_rdkit_properties.kappa1 8.890
_pdbe_chem_comp_rdkit_properties.kappa2 14.090
_pdbe_chem_comp_rdkit_properties.kappa3 8.391
_pdbe_chem_comp_rdkit_properties.Phi 2.982
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
62S UniChem PubChem 137650040
62S UniChem BindingDb 50245390
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
62S C15 0.570 1.204 -0.092 ETKDGv3 1
62S C17 -1.419 2.749 -0.239 ETKDGv3 2
62S C22 -4.550 2.858 1.619 ETKDGv3 3
62S C24 -6.874 3.383 2.219 ETKDGv3 4
62S C26 -5.531 1.988 3.695 ETKDGv3 5
62S C01 6.798 -0.708 -0.749 ETKDGv3 6
62S C02 6.286 -1.760 -1.413 ETKDGv3 7
62S C03 6.524 -1.912 -2.864 ETKDGv3 8
62S C04 7.244 -0.998 -3.525 ETKDGv3 9
62S C05 7.803 0.164 -2.805 ETKDGv3 10
62S C06 7.593 0.303 -1.490 ETKDGv3 11
62S C07 6.534 -0.527 0.724 ETKDGv3 12
62S C08 5.120 0.012 0.995 ETKDGv3 13
62S C09 4.905 1.442 0.460 ETKDGv3 14
62S C14 2.068 1.020 -0.418 ETKDGv3 15
62S C16 0.053 2.605 -0.488 ETKDGv3 16
62S C18 -2.015 2.775 0.943 ETKDGv3 17
62S C19 -3.444 2.890 0.637 ETKDGv3 18
62S C23 -5.854 3.553 1.364 ETKDGv3 19
62S C25 -6.706 2.566 3.435 ETKDGv3 20
62S C27 -4.408 2.136 2.748 ETKDGv3 21
62S C29 -0.229 0.129 -0.793 ETKDGv3 22
62S C32 -1.963 -1.721 -0.666 ETKDGv3 23
62S C33 -3.252 -1.007 -0.980 ETKDGv3 24
62S C36 -2.202 -2.935 0.253 ETKDGv3 25
62S C37 -3.058 -3.981 -0.414 ETKDGv3 26
62S C38 -4.521 -4.012 -0.163 ETKDGv3 27
62S C39 -5.293 -4.916 -0.781 ETKDGv3 28
62S C40 -4.691 -5.886 -1.717 ETKDGv3 29
62S C41 -3.374 -5.860 -1.954 ETKDGv3 30
62S C42 -2.519 -4.861 -1.278 ETKDGv3 31
62S N10 5.818 2.373 1.127 ETKDGv3 32
62S N20 -3.622 2.911 -0.645 ETKDGv3 33
62S N31 -1.030 -0.786 -0.031 ETKDGv3 34
62S N35 -3.996 -0.354 0.049 ETKDGv3 35
62S O12 3.066 3.444 0.351 ETKDGv3 36
62S O13 2.708 1.750 2.308 ETKDGv3 37
62S O21 -2.381 2.837 -1.230 ETKDGv3 38
62S O28 -6.040 4.410 0.279 ETKDGv3 39
62S O30 -0.204 0.055 -2.052 ETKDGv3 40
62S O34 -3.684 -0.993 -2.163 ETKDGv3 41
62S P11 3.165 1.975 0.693 ETKDGv3 42
62S H151 0.438 1.084 1.006 ETKDGv3 43
62S H241 -7.820 3.880 2.043 ETKDGv3 44
62S H261 -5.404 1.394 4.591 ETKDGv3 45
62S H021 5.692 -2.504 -0.897 ETKDGv3 46
62S H031 6.112 -2.763 -3.391 ETKDGv3 47
62S H041 7.418 -1.108 -4.588 ETKDGv3 48
62S H051 8.381 0.904 -3.344 ETKDGv3 49
62S H061 8.001 1.161 -0.971 ETKDGv3 50
62S H072 7.293 0.151 1.172 ETKDGv3 51
62S H071 6.646 -1.507 1.237 ETKDGv3 52
62S H081 4.382 -0.681 0.540 ETKDGv3 53
62S H082 4.948 0.003 2.093 ETKDGv3 54
62S H091 5.109 1.459 -0.632 ETKDGv3 55
62S H142 2.278 1.308 -1.471 ETKDGv3 56
62S H141 2.328 -0.053 -0.305 ETKDGv3 57
62S H161 0.573 3.386 0.102 ETKDGv3 58
62S H162 0.257 2.798 -1.564 ETKDGv3 59
62S H181 -1.536 2.711 1.912 ETKDGv3 60
62S H251 -7.533 2.450 4.124 ETKDGv3 61
62S H271 -3.488 1.606 2.960 ETKDGv3 62
62S H321 -1.509 -2.098 -1.610 ETKDGv3 63
62S H362 -2.676 -2.610 1.205 ETKDGv3 64
62S H361 -1.221 -3.383 0.524 ETKDGv3 65
62S H381 -4.971 -3.300 0.518 ETKDGv3 66
62S H391 -6.359 -4.936 -0.597 ETKDGv3 67
62S H401 -5.318 -6.616 -2.213 ETKDGv3 68
62S H411 -2.931 -6.569 -2.642 ETKDGv3 69
62S H421 -1.458 -4.846 -1.492 ETKDGv3 70
62S H101 5.529 2.484 2.126 ETKDGv3 71
62S H1 5.737 3.309 0.668 ETKDGv3 72
62S H311 -1.046 -0.691 1.010 ETKDGv3 73
62S H352 -3.651 -0.341 1.034 ETKDGv3 74
62S H351 -4.896 0.126 -0.175 ETKDGv3 75
62S H131 2.582 0.773 2.405 ETKDGv3 76
62S H281 -5.285 4.704 -0.325 ETKDGv3 77
#