data_62P
#
_chem_comp.id 62P
_chem_comp.name 6-[(5-CHLORO-3-METHYL-1-BENZOFURAN-2-YL)SULFONYL]PYRIDAZIN-3(2H)-ONE
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C13 H9 Cl N2 O4 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2005-04-04
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 324.740
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 62P
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1Z89
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
62P C2 C2 C 0 1 Y N N N N N 17.579 -7.214 17.610 -2.949 0.480 1.227 C2 62P 1
62P C3 C3 C 0 1 Y N N N N N 16.977 -7.003 16.275 -2.696 -0.219 0.036 C3 62P 2
62P S8 S8 S 0 1 N N N N N N 17.748 -7.788 14.888 -1.613 -1.609 0.050 S8 62P 3
62P O19 O19 O 0 1 N N N N N N 19.177 -7.583 15.068 -1.687 -2.143 1.365 O19 62P 4
62P O18 O18 O 0 1 N N N N N N 17.081 -9.042 14.641 -1.889 -2.326 -1.145 O18 62P 5
62P C9 C9 C 0 1 Y N N N N N 17.254 -6.713 13.548 0.030 -0.998 -0.126 C9 62P 6
62P O13 O13 O 0 1 Y N N N N N 16.003 -6.845 13.079 0.660 -0.811 -1.299 O13 62P 7
62P C12 C12 C 0 1 Y N N N N N 15.932 -5.840 12.130 1.906 -0.334 -1.105 C12 62P 8
62P C17 C17 C 0 1 Y N N N N N 14.766 -5.620 11.378 2.940 0.013 -1.966 C17 62P 9
62P C16 C16 C 0 1 Y N N N N N 14.853 -4.564 10.458 4.131 0.484 -1.456 C16 62P 10
62P C15 C15 C 0 1 Y N N N N N 16.049 -3.847 10.364 4.313 0.617 -0.087 C15 62P 11
62P CL21 CL21 CL 0 0 N N N N N N 16.079 -2.551 9.213 5.822 1.211 0.532 CL21 62P 12
62P C14 C14 C 0 1 Y N N N N N 17.211 -4.068 11.107 3.299 0.278 0.784 C14 62P 13
62P C11 C11 C 0 1 Y N N N N N 17.093 -5.121 12.015 2.090 -0.199 0.281 C11 62P 14
62P C10 C10 C 0 1 Y N N N N N 18.009 -5.749 13.025 0.830 -0.644 0.889 C10 62P 15
62P C20 C20 C 0 1 N N N N N N 19.430 -5.345 13.324 0.504 -0.697 2.359 C20 62P 16
62P N4 N4 N 0 1 Y N N N N N 15.883 -6.400 16.114 -3.262 0.149 -1.080 N4 62P 17
62P N5 N5 N 0 1 Y N N N N N 15.213 -5.906 17.166 -4.059 1.153 -1.149 N5 62P 18
62P C6 C6 C 0 1 Y N N N N N 15.627 -6.026 18.396 -4.362 1.892 -0.065 C6 62P 19
62P O7 O7 O 0 1 N N N N N N 15.017 -5.583 19.362 -5.124 2.841 -0.158 O7 62P 20
62P C1 C1 C 0 1 Y N N N N N 16.903 -6.726 18.661 -3.790 1.556 1.181 C1 62P 21
62P H2 H2 H 0 1 N N N N N N 18.517 -7.735 17.732 -2.485 0.180 2.155 H2 62P 22
62P H17 H17 H 0 1 N N N N N N 13.874 -6.216 11.498 2.810 -0.086 -3.033 H17 62P 23
62P H16 H16 H 0 1 N N N N N N 14.010 -4.310 9.833 4.932 0.752 -2.130 H16 62P 24
62P H14 H14 H 0 1 N N N N N N 18.111 -3.482 10.990 3.441 0.382 1.850 H14 62P 25
62P H201 1H20 H 0 0 N N N N N N 19.904 -6.112 13.954 0.064 0.251 2.668 H201 62P 26
62P H202 2H20 H 0 0 N N N N N N 19.433 -4.381 13.855 -0.205 -1.504 2.545 H202 62P 27
62P H203 3H20 H 0 0 N N N N N N 19.990 -5.247 12.382 1.416 -0.877 2.927 H203 62P 28
62P HN5 HN5 H 0 1 N N N N N N 14.354 -5.422 16.998 -4.454 1.385 -2.005 HN5 62P 29
62P H1 H1 H 0 1 N N N N N N 17.278 -6.840 19.667 -4.012 2.129 2.070 H1 62P 30
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
62P C2 C3 SING Y N 1
62P C2 C1 DOUB Y N 2
62P C2 H2 SING N N 3
62P C3 S8 SING N N 4
62P C3 N4 DOUB Y N 5
62P S8 O19 DOUB N N 6
62P S8 O18 DOUB N N 7
62P S8 C9 SING N N 8
62P C9 O13 SING Y N 9
62P C9 C10 DOUB Y N 10
62P O13 C12 SING Y N 11
62P C12 C17 DOUB Y N 12
62P C12 C11 SING Y N 13
62P C17 C16 SING Y N 14
62P C17 H17 SING N N 15
62P C16 C15 DOUB Y N 16
62P C16 H16 SING N N 17
62P C15 CL21 SING N N 18
62P C15 C14 SING Y N 19
62P C14 C11 DOUB Y N 20
62P C14 H14 SING N N 21
62P C11 C10 SING Y N 22
62P C10 C20 SING N N 23
62P C20 H201 SING N N 24
62P C20 H202 SING N N 25
62P C20 H203 SING N N 26
62P N4 N5 SING Y N 27
62P N5 C6 SING Y N 28
62P N5 HN5 SING N N 29
62P C6 O7 DOUB N N 30
62P C6 C1 SING Y N 31
62P C1 H1 SING N N 32
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
62P SMILES ACDLabs 10.04 O=C1C=CC(=NN1)S(=O)(=O)c3oc2ccc(Cl)cc2c3C
62P SMILES_CANONICAL CACTVS 3.341 Cc1c2cc(Cl)ccc2oc1[S](=O)(=O)C3=NNC(=O)C=C3
62P SMILES CACTVS 3.341 Cc1c2cc(Cl)ccc2oc1[S](=O)(=O)C3=NNC(=O)C=C3
62P SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 Cc1c2cc(ccc2oc1S(=O)(=O)C3=NNC(=O)C=C3)Cl
62P SMILES "OpenEye OEToolkits" 1.5.0 Cc1c2cc(ccc2oc1S(=O)(=O)C3=NNC(=O)C=C3)Cl
62P InChI InChI 1.03 InChI=1S/C13H9ClN2O4S/c1-7-9-6-8(14)2-3-10(9)20-13(7)21(18,19)12-5-4-11(17)15-16-12/h2-6H,1H3,(H,15,17)
62P InChIKey InChI 1.03 FXFPQPNUMWQRAO-UHFFFAOYSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
62P "SYSTEMATIC NAME" ACDLabs 10.04 6-[(5-chloro-3-methyl-1-benzofuran-2-yl)sulfonyl]pyridazin-3(2H)-one
62P "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 6-[(5-chloro-3-methyl-1-benzofuran-2-yl)sulfonyl]-2H-pyridazin-3-one
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
62P 'Create component' 2005-04-04 RCSB
62P 'Modify descriptor' 2011-06-04 RCSB
#
_pdbe_chem_comp_drugbank_details.comp_id 62P
_pdbe_chem_comp_drugbank_details.drugbank_id DB07187
_pdbe_chem_comp_drugbank_details.type 'small molecule'
_pdbe_chem_comp_drugbank_details.name CP-744809
_pdbe_chem_comp_drugbank_details.description ?
_pdbe_chem_comp_drugbank_details.cas_number 463976-07-0
_pdbe_chem_comp_drugbank_details.mechanism_of_action ?
#
_pdbe_chem_comp_drugbank_classification.comp_id 62P
_pdbe_chem_comp_drugbank_classification.drugbank_id DB07187
_pdbe_chem_comp_drugbank_classification.parent Benzofurans
_pdbe_chem_comp_drugbank_classification.kingdom 'Organic compounds'
_pdbe_chem_comp_drugbank_classification.class Benzofurans
_pdbe_chem_comp_drugbank_classification.superclass 'Organoheterocyclic compounds'
_pdbe_chem_comp_drugbank_classification.description
'This compound belongs to the class of organic compounds known as benzofurans. These are organic compounds containing a benzene ring fused to a furan. Furan is a five-membered aromatic ring with four carbon atoms and one oxygen atom.'
#
_pdbe_chem_comp_drugbank_targets.comp_id 62P
_pdbe_chem_comp_drugbank_targets.drugbank_id DB07187
_pdbe_chem_comp_drugbank_targets.name 'Aldo-keto reductase family 1 member B1'
_pdbe_chem_comp_drugbank_targets.organism Humans
_pdbe_chem_comp_drugbank_targets.uniprot_id P15121
_pdbe_chem_comp_drugbank_targets.pharmacologically_active yes
_pdbe_chem_comp_drugbank_targets.ordinal 1
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
62P C2 C 12.942 -1.563 1
62P C3 C 12.192 -0.264 2
62P S8 S 10.692 -0.264 3
62P O19 O 10.692 -1.764 4
62P O18 O 10.692 1.236 5
62P C9 C 9.192 -0.264 6
62P O13 O 8.316 -1.471 7
62P C12 C 6.897 -1.014 8
62P C17 C 5.598 -1.764 9
62P C16 C 4.299 -1.014 10
62P C15 C 4.299 0.486 11
62P CL21 Cl 3.000 1.236 12
62P C14 C 5.598 1.236 13
62P C11 C 6.897 0.486 14
62P C10 C 8.316 0.943 15
62P C20 C 8.783 2.369 16
62P N4 N 12.942 1.035 17
62P N5 N 14.442 1.035 18
62P C6 C 15.192 -0.264 19
62P O7 O 16.692 -0.264 20
62P C1 C 14.442 -1.563 21
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
62P C2 C3 SINGLE NONE 1
62P C2 C1 DOUBLE NONE 2
62P C3 S8 SINGLE NONE 3
62P C3 N4 DOUBLE NONE 4
62P S8 O19 DOUBLE NONE 5
62P S8 O18 DOUBLE NONE 6
62P S8 C9 SINGLE NONE 7
62P C9 O13 SINGLE NONE 8
62P C9 C10 DOUBLE NONE 9
62P O13 C12 SINGLE NONE 10
62P C12 C17 DOUBLE NONE 11
62P C12 C11 SINGLE NONE 12
62P C17 C16 SINGLE NONE 13
62P C16 C15 DOUBLE NONE 14
62P C15 CL21 SINGLE NONE 15
62P C15 C14 SINGLE NONE 16
62P C14 C11 DOUBLE NONE 17
62P C11 C10 SINGLE NONE 18
62P C10 C20 SINGLE NONE 19
62P N4 N5 SINGLE NONE 20
62P N5 C6 SINGLE NONE 21
62P C6 O7 DOUBLE NONE 22
62P C6 C1 SINGLE NONE 23
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
62P MurckoScaffold S1 scaffold 'O=c1ccc(S(=O)(=O)c2cc3ccccc3o2)n[nH]1' InChI=1S/C12H8N2O4S/c15-10-5-6-11(14-13-10)19(16,17)12-7-8-3-1-2-4-9(8)18-12/h1-7H,(H,13,15) RBZSSTPBYFHRSR-UHFFFAOYSA-N
62P furan F1 fragment c1ccoc1 InChI=1S/C4H4O/c1-2-4-5-3-1/h1-4H YLQBMQCUIZJEEH-UHFFFAOYSA-N
62P phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
62P pyridazine F3 fragment c1ccnnc1 InChI=1S/C4H4N2/c1-2-4-6-5-3-1/h1-4H PBMFSQRYOILNGV-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
62P C2 S1 1
62P C3 S1 1
62P S8 S1 1
62P O19 S1 1
62P O18 S1 1
62P C9 S1 1
62P O13 S1 1
62P C12 S1 1
62P C17 S1 1
62P C16 S1 1
62P C15 S1 1
62P C14 S1 1
62P C11 S1 1
62P C10 S1 1
62P N4 S1 1
62P N5 S1 1
62P C6 S1 1
62P O7 S1 1
62P C1 S1 1
62P C9 F1 1
62P C10 F1 1
62P C11 F1 1
62P C12 F1 1
62P O13 F1 1
62P C12 F2 1
62P C17 F2 1
62P C16 F2 1
62P C15 F2 1
62P C14 F2 1
62P C11 F2 1
62P C2 F3 1
62P C3 F3 1
62P N4 F3 1
62P N5 F3 1
62P C6 F3 1
62P C1 F3 1
#
_pdbe_chem_comp_rdkit_properties.comp_id 62P
_pdbe_chem_comp_rdkit_properties.exactmw 323.997
_pdbe_chem_comp_rdkit_properties.amw 324.745
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 6
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 1
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 3
_pdbe_chem_comp_rdkit_properties.NumHBD 1
_pdbe_chem_comp_rdkit_properties.NumHBA 5
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 21
_pdbe_chem_comp_rdkit_properties.NumAtoms 30
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 8
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.077
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 136.530
_pdbe_chem_comp_rdkit_properties.tpsa 93.030
_pdbe_chem_comp_rdkit_properties.CrippenClogP 2.511
_pdbe_chem_comp_rdkit_properties.CrippenMR 75.047
_pdbe_chem_comp_rdkit_properties.chi0v 11.386
_pdbe_chem_comp_rdkit_properties.chi1v 7.051
_pdbe_chem_comp_rdkit_properties.chi2v 4.060
_pdbe_chem_comp_rdkit_properties.chi3v 4.060
_pdbe_chem_comp_rdkit_properties.chi4v 2.731
_pdbe_chem_comp_rdkit_properties.chi0n 18.814
_pdbe_chem_comp_rdkit_properties.chi1n 9.637
_pdbe_chem_comp_rdkit_properties.chi2n 2.403
_pdbe_chem_comp_rdkit_properties.chi3n 2.403
_pdbe_chem_comp_rdkit_properties.chi4n 1.516
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.120
_pdbe_chem_comp_rdkit_properties.kappa1 6.760
_pdbe_chem_comp_rdkit_properties.kappa2 4.712
_pdbe_chem_comp_rdkit_properties.kappa3 2.239
_pdbe_chem_comp_rdkit_properties.Phi 1.517
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
62P UniChem DrugBank DB07187
62P UniChem fdasrs U63F8E95J1
62P UniChem SureChEMBL SCHEMBL690925
62P UniChem 'PubChem TPHARMA' 14924049
62P UniChem 'PubChem TPHARMA' 14944063
62P UniChem BindingDb 16315
62P UniChem 'EPA CompTox Dashboard' DTXSID70196828
62P UniChem BRENDA 132027
62P UniChem BRENDA 212516
62P UniChem BRENDA 60477
62P UniChem 'Probes And Drugs' PD005646
62P UniChem Nikkaji J2.282.363I
62P UniChem PubChem 6420118
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
62P C2 -2.622 0.656 -0.163 ETKDGv3 1
62P C3 -2.378 -0.589 -0.928 ETKDGv3 2
62P S8 -1.073 -0.650 -2.098 ETKDGv3 3
62P O19 -1.414 0.244 -3.256 ETKDGv3 4
62P O18 -0.891 -2.054 -2.602 ETKDGv3 5
62P C9 0.425 -0.105 -1.356 ETKDGv3 6
62P O13 1.182 0.949 -1.884 ETKDGv3 7
62P C12 2.250 1.128 -1.025 ETKDGv3 8
62P C17 3.235 2.023 -1.101 ETKDGv3 9
62P C16 4.262 2.008 -0.024 ETKDGv3 10
62P C15 4.180 1.113 0.989 ETKDGv3 11
62P CL21 5.392 1.105 2.256 ETKDGv3 12
62P C14 3.062 0.130 1.035 ETKDGv3 13
62P C11 2.164 0.172 0.047 ETKDGv3 14
62P C10 0.966 -0.612 -0.234 ETKDGv3 15
62P C20 0.384 -1.681 0.640 ETKDGv3 16
62P N4 -3.114 -1.645 -0.727 ETKDGv3 17
62P N5 -4.162 -1.646 0.212 ETKDGv3 18
62P C6 -4.432 -0.468 0.976 ETKDGv3 19
62P O7 -5.362 -0.450 1.825 ETKDGv3 20
62P C1 -3.599 0.716 0.746 ETKDGv3 21
62P H2 -2.001 1.525 -0.338 ETKDGv3 22
62P H17 3.282 2.736 -1.913 ETKDGv3 23
62P H16 5.075 2.722 -0.057 ETKDGv3 24
62P H14 2.982 -0.589 1.839 ETKDGv3 25
62P H201 -0.072 -2.482 0.022 ETKDGv3 26
62P H202 -0.391 -1.239 1.300 ETKDGv3 27
62P H203 1.176 -2.139 1.267 ETKDGv3 28
62P HN5 -4.734 -2.508 0.349 ETKDGv3 29
62P H1 -3.772 1.628 1.304 ETKDGv3 30
#