data_5KW
#
_chem_comp.id 5KW
_chem_comp.name '2-chloro-N-{2-[(5-chloro-2-{[4-(4-methylpiperazin-1-yl)phenyl]amino}pyrimidin-4-yl)oxy]phenyl}acetamide'
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula 'C23 H24 Cl2 N6 O2'
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2015-10-15
_chem_comp.pdbx_modified_date 2024-09-27
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 487.382
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 5KW
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 5E7R
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
_chem_comp.pdbx_pcm Y
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
5KW C01 C1 C 0 1 N N N N N N -21.293 -51.884 -20.797 7.826 1.724 -1.339 C01 5KW 1
5KW N02 N1 N 0 1 N N N N N N -20.538 -51.457 -21.766 8.265 0.647 -0.442 N02 5KW 2
5KW C03 C2 C 0 1 N N N N N N -20.639 -50.076 -21.940 7.898 0.939 0.951 C03 5KW 3
5KW C04 C3 C 0 1 N N N N N N -20.017 -49.316 -20.751 6.373 0.967 1.079 C04 5KW 4
5KW C05 C4 C 0 1 N N N N N N -19.223 -51.892 -21.638 7.717 -0.648 -0.868 C05 5KW 5
5KW C06 C5 C 0 1 N N N N N N -18.529 -51.228 -20.432 6.192 -0.621 -0.739 C06 5KW 6
5KW N07 N2 N 0 1 N N N N N N -18.656 -49.765 -20.445 5.825 -0.329 0.653 N07 5KW 7
5KW C08 C6 C 0 1 Y N N N N N -17.769 -48.928 -19.578 4.437 -0.367 0.825 C08 5KW 8
5KW C09 C7 C 0 1 Y N N N N N -18.330 -48.035 -18.663 3.725 -1.508 0.481 C09 5KW 9
5KW C10 C8 C 0 1 Y N N N N N -17.498 -47.250 -17.849 2.356 -1.546 0.650 C10 5KW 10
5KW C11 C9 C 0 1 Y N N N N N -16.393 -49.038 -19.684 3.771 0.736 1.345 C11 5KW 11
5KW C12 C10 C 0 1 Y N N N N N -15.561 -48.252 -18.869 2.401 0.698 1.515 C12 5KW 12
5KW C13 C11 C 0 1 Y N N N N N -16.121 -47.360 -17.955 1.689 -0.442 1.165 C13 5KW 13
5KW N14 N3 N 0 1 N N N N N N -15.240 -46.527 -17.092 0.300 -0.479 1.337 N14 5KW 14
5KW C15 C12 C 0 1 Y N N N N N -13.903 -47.024 -16.700 -0.493 -1.159 0.426 C15 5KW 15
5KW N16 N4 N 0 1 Y N N N N N -13.006 -46.154 -16.277 0.086 -1.834 -0.556 N16 5KW 16
5KW C17 C13 C 0 1 Y N N N N N -11.786 -46.559 -15.912 -0.638 -2.496 -1.445 C17 5KW 17
5KW C18 C14 C 0 1 Y N N N N N -11.494 -47.926 -15.993 -2.018 -2.478 -1.342 C18 5KW 18
5KW CL1 CL1 CL 0 0 N N N N N N -9.882 -48.525 -15.520 -3.005 -3.333 -2.486 CL1 5KW 19
5KW C20 C15 C 0 1 Y N N N N N -12.465 -48.817 -16.444 -2.597 -1.758 -0.297 C20 5KW 20
5KW O21 O1 O 0 1 N N N N N N -12.190 -50.210 -16.534 -3.944 -1.714 -0.157 O21 5KW 21
5KW C22 C16 C 0 1 Y N N N N N -12.402 -50.649 -17.866 -4.459 -0.913 0.813 C22 5KW 22
5KW C23 C17 C 0 1 Y N N N N N -13.648 -51.117 -18.251 -4.860 -1.458 2.023 C23 5KW 23
5KW C24 C18 C 0 1 Y N N N N N -13.857 -51.548 -19.559 -5.384 -0.643 3.009 C24 5KW 24
5KW C25 C19 C 0 1 Y N N N N N -12.812 -51.509 -20.482 -5.510 0.717 2.792 C25 5KW 25
5KW C26 C20 C 0 1 Y N N N N N -11.565 -51.041 -20.098 -5.113 1.268 1.589 C26 5KW 26
5KW C27 C21 C 0 1 Y N N N N N -11.356 -50.609 -18.789 -4.581 0.458 0.597 C27 5KW 27
5KW N28 N5 N 0 1 N N N N N N -10.047 -50.117 -18.384 -4.177 1.014 -0.624 N28 5KW 28
5KW C29 C22 C 0 1 N N N N N N -8.839 -50.744 -18.906 -3.656 2.257 -0.659 C29 5KW 29
5KW C30 C23 C 0 1 N N N N N N -7.465 -50.226 -18.480 -3.344 2.906 -1.982 C30 5KW 30
5KW O31 O2 O 0 1 N N N N N N -8.922 -51.656 -19.662 -3.439 2.852 0.375 O31 5KW 31
5KW N32 N6 N 0 1 Y N N N N N -13.658 -48.333 -16.789 -1.810 -1.122 0.562 N32 5KW 32
5KW H1 H1 H 0 1 N N N N N N -21.181 -52.974 -20.697 6.738 1.785 -1.329 H1 5KW 33
5KW H2 H2 H 0 1 N N N N N N -20.993 -51.397 -19.857 8.246 2.672 -1.002 H2 5KW 34
5KW H3 H3 H 0 1 N N N N N N -22.343 -51.642 -21.017 8.169 1.516 -2.353 H3 5KW 35
5KW H5 H5 H 0 1 N N N N N N -20.112 -49.791 -22.863 8.304 0.166 1.603 H5 5KW 36
5KW H6 H6 H 0 1 N N N N N N -21.701 -49.802 -22.025 8.305 1.909 1.238 H6 5KW 37
5KW H7 H7 H 0 1 N N N N N N -19.988 -48.244 -20.995 6.099 1.154 2.117 H7 5KW 38
5KW H8 H8 H 0 1 N N N N N N -20.648 -49.473 -19.864 5.970 1.758 0.447 H8 5KW 39
5KW H9 H9 H 0 1 N N N N N N -19.218 -52.983 -21.498 7.991 -0.836 -1.906 H9 5KW 40
5KW H10 H10 H 0 1 N N N N N N -18.670 -51.637 -22.554 8.121 -1.439 -0.236 H10 5KW 41
5KW H11 H11 H 0 1 N N N N N N -18.984 -51.613 -19.507 5.786 0.152 -1.392 H11 5KW 42
5KW H12 H12 H 0 1 N N N N N N -17.461 -51.489 -20.452 5.785 -1.590 -1.027 H12 5KW 43
5KW H13 H13 H 0 1 N N N N N N -19.403 -47.948 -18.581 4.244 -2.367 0.080 H13 5KW 44
5KW H14 H14 H 0 1 N N N N N N -17.931 -46.560 -17.140 1.802 -2.434 0.383 H14 5KW 45
5KW H15 H15 H 0 1 N N N N N N -15.959 -49.728 -20.393 4.325 1.622 1.617 H15 5KW 46
5KW H16 H16 H 0 1 N N N N N N -14.488 -48.339 -18.950 1.884 1.555 1.919 H16 5KW 47
5KW H17 H17 H 0 1 N N N N N N -15.552 -45.631 -16.777 -0.108 -0.030 2.093 H17 5KW 48
5KW H18 H18 H 0 1 N N N N N N -11.047 -45.852 -15.565 -0.158 -3.044 -2.243 H18 5KW 49
5KW H19 H19 H 0 1 N N N N N N -14.457 -51.148 -17.537 -4.763 -2.520 2.196 H19 5KW 50
5KW H20 H20 H 0 1 N N N N N N -14.829 -51.912 -19.859 -5.696 -1.069 3.951 H20 5KW 51
5KW H21 H21 H 0 1 N N N N N N -12.974 -51.843 -21.496 -5.924 1.349 3.564 H21 5KW 52
5KW H22 H22 H 0 1 N N N N N N -10.756 -51.011 -20.813 -5.212 2.331 1.422 H22 5KW 53
5KW H23 H23 H 0 1 N N N N N N -9.977 -49.349 -17.748 -4.272 0.505 -1.444 H23 5KW 54
5KW H24 H24 H 0 1 N N N N N N -7.116 -50.785 -17.599 -2.616 2.300 -2.522 H24 5KW 55
5KW H25 H25 H 0 1 N N N N N N -6.749 -50.356 -19.305 -4.258 2.987 -2.572 H25 5KW 56
5KW CL2 CL2 CL 0 0 N Y N N N N -7.595 -48.618 -18.104 -2.664 4.552 -1.698 CL2 5KW 57
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
5KW C03 N02 SING N N 1
5KW C03 C04 SING N N 2
5KW N02 C05 SING N N 3
5KW N02 C01 SING N N 4
5KW C05 C06 SING N N 5
5KW C04 N07 SING N N 6
5KW C25 C26 DOUB Y N 7
5KW C25 C24 SING Y N 8
5KW N07 C06 SING N N 9
5KW N07 C08 SING N N 10
5KW C26 C27 SING Y N 11
5KW C11 C08 DOUB Y N 12
5KW C11 C12 SING Y N 13
5KW O31 C29 DOUB N N 14
5KW C08 C09 SING Y N 15
5KW C24 C23 DOUB Y N 16
5KW C29 C30 SING N N 17
5KW C29 N28 SING N N 18
5KW C12 C13 DOUB Y N 19
5KW C27 N28 SING N N 20
5KW C27 C22 DOUB Y N 21
5KW C09 C10 DOUB Y N 22
5KW C23 C22 SING Y N 23
5KW C13 C10 SING Y N 24
5KW C13 N14 SING N N 25
5KW C22 O21 SING N N 26
5KW N14 C15 SING N N 27
5KW N32 C15 DOUB Y N 28
5KW N32 C20 SING Y N 29
5KW C15 N16 SING Y N 30
5KW O21 C20 SING N N 31
5KW C20 C18 DOUB Y N 32
5KW N16 C17 DOUB Y N 33
5KW C18 C17 SING Y N 34
5KW C18 CL1 SING N N 35
5KW C01 H1 SING N N 36
5KW C01 H2 SING N N 37
5KW C01 H3 SING N N 38
5KW C03 H5 SING N N 39
5KW C03 H6 SING N N 40
5KW C04 H7 SING N N 41
5KW C04 H8 SING N N 42
5KW C05 H9 SING N N 43
5KW C05 H10 SING N N 44
5KW C06 H11 SING N N 45
5KW C06 H12 SING N N 46
5KW C09 H13 SING N N 47
5KW C10 H14 SING N N 48
5KW C11 H15 SING N N 49
5KW C12 H16 SING N N 50
5KW N14 H17 SING N N 51
5KW C17 H18 SING N N 52
5KW C23 H19 SING N N 53
5KW C24 H20 SING N N 54
5KW C25 H21 SING N N 55
5KW C26 H22 SING N N 56
5KW N28 H23 SING N N 57
5KW C30 H24 SING N N 58
5KW C30 H25 SING N N 59
5KW C30 CL2 SING N N 60
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
5KW SMILES ACDLabs 12.01 'CN1CCN(CC1)c2ccc(cc2)Nc4ncc(Cl)c(Oc3ccccc3NC(CCl)=O)n4'
5KW InChI InChI 1.03 'InChI=1S/C23H24Cl2N6O2/c1-30-10-12-31(13-11-30)17-8-6-16(7-9-17)27-23-26-15-18(25)22(29-23)33-20-5-3-2-4-19(20)28-21(32)14-24/h2-9,15H,10-14H2,1H3,(H,28,32)(H,26,27,29)'
5KW InChIKey InChI 1.03 NQUKOQARFOAHTI-UHFFFAOYSA-N
5KW SMILES_CANONICAL CACTVS 3.385 'CN1CCN(CC1)c2ccc(Nc3ncc(Cl)c(Oc4ccccc4NC(=O)CCl)n3)cc2'
5KW SMILES CACTVS 3.385 'CN1CCN(CC1)c2ccc(Nc3ncc(Cl)c(Oc4ccccc4NC(=O)CCl)n3)cc2'
5KW SMILES_CANONICAL 'OpenEye OEToolkits' 1.9.2 'CN1CCN(CC1)c2ccc(cc2)Nc3ncc(c(n3)Oc4ccccc4NC(=O)CCl)Cl'
5KW SMILES 'OpenEye OEToolkits' 1.9.2 'CN1CCN(CC1)c2ccc(cc2)Nc3ncc(c(n3)Oc4ccccc4NC(=O)CCl)Cl'
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
5KW 'SYSTEMATIC NAME' ACDLabs 12.01 '2-chloro-N-{2-[(5-chloro-2-{[4-(4-methylpiperazin-1-yl)phenyl]amino}pyrimidin-4-yl)oxy]phenyl}acetamide'
5KW 'SYSTEMATIC NAME' 'OpenEye OEToolkits' 1.9.2 '2-chloranyl-N-[2-[5-chloranyl-2-[[4-(4-methylpiperazin-1-yl)phenyl]amino]pyrimidin-4-yl]oxyphenyl]ethanamide'
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
5KW 'Create component' 2015-10-15 RCSB
5KW 'Initial release' 2016-09-21 RCSB
5KW 'Modify PCM' 2024-09-27 PDBE
#
_pdbx_chem_comp_pcm.pcm_id 1
_pdbx_chem_comp_pcm.comp_id 5KW
_pdbx_chem_comp_pcm.modified_residue_id CYS
_pdbx_chem_comp_pcm.type None
_pdbx_chem_comp_pcm.category 'Covalent chemical modification'
_pdbx_chem_comp_pcm.position 'Amino-acid side chain'
_pdbx_chem_comp_pcm.polypeptide_position 'Any position'
_pdbx_chem_comp_pcm.comp_id_linking_atom C30
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ?
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ?
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
5KW C01 C 23.785 4.875 1
5KW N02 N 22.486 4.125 2
5KW C03 C 21.187 4.875 3
5KW C04 C 19.887 4.125 4
5KW C05 C 22.486 2.625 5
5KW C06 C 21.187 1.875 6
5KW N07 N 19.887 2.625 7
5KW C08 C 18.588 1.875 8
5KW C09 C 17.290 2.625 9
5KW C10 C 15.990 1.875 10
5KW C11 C 18.588 0.375 11
5KW C12 C 17.290 -0.375 12
5KW C13 C 15.990 0.375 13
5KW N14 N 14.691 -0.375 14
5KW C15 C 13.392 0.375 15
5KW N16 N 13.392 1.875 16
5KW C17 C 12.093 2.625 17
5KW C18 C 10.794 1.875 18
5KW CL1 Cl 9.495 2.625 19
5KW C20 C 10.794 0.375 20
5KW O21 O 9.495 -0.375 21
5KW C22 C 9.495 -1.875 22
5KW C23 C 10.794 -2.625 23
5KW C24 C 10.794 -4.125 24
5KW C25 C 9.495 -4.875 25
5KW C26 C 8.196 -4.125 26
5KW C27 C 8.196 -2.625 27
5KW N28 N 6.897 -1.875 28
5KW C29 C 5.598 -2.625 29
5KW C30 C 4.299 -1.875 30
5KW O31 O 5.598 -4.125 31
5KW N32 N 12.093 -0.375 32
5KW CL2 Cl 3.000 -2.625 33
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
5KW C03 N02 SINGLE NONE 1
5KW C03 C04 SINGLE NONE 2
5KW N02 C05 SINGLE NONE 3
5KW N02 C01 SINGLE NONE 4
5KW C05 C06 SINGLE NONE 5
5KW C04 N07 SINGLE NONE 6
5KW C25 C26 DOUBLE NONE 7
5KW C25 C24 SINGLE NONE 8
5KW N07 C06 SINGLE NONE 9
5KW N07 C08 SINGLE NONE 10
5KW C26 C27 SINGLE NONE 11
5KW C11 C08 SINGLE NONE 12
5KW C11 C12 DOUBLE NONE 13
5KW O31 C29 DOUBLE NONE 14
5KW C08 C09 DOUBLE NONE 15
5KW C24 C23 DOUBLE NONE 16
5KW C29 C30 SINGLE NONE 17
5KW C29 N28 SINGLE NONE 18
5KW C12 C13 SINGLE NONE 19
5KW C27 N28 SINGLE NONE 20
5KW C27 C22 DOUBLE NONE 21
5KW C09 C10 SINGLE NONE 22
5KW C23 C22 SINGLE NONE 23
5KW C13 C10 DOUBLE NONE 24
5KW C13 N14 SINGLE NONE 25
5KW C22 O21 SINGLE NONE 26
5KW N14 C15 SINGLE NONE 27
5KW N32 C15 SINGLE NONE 28
5KW N32 C20 DOUBLE NONE 29
5KW C15 N16 DOUBLE NONE 30
5KW O21 C20 SINGLE NONE 31
5KW C20 C18 SINGLE NONE 32
5KW N16 C17 SINGLE NONE 33
5KW C18 C17 DOUBLE NONE 34
5KW C18 CL1 SINGLE NONE 35
5KW C30 CL2 SINGLE NONE 36
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
5KW MurckoScaffold S1 scaffold c1ccc(Oc2ccnc(Nc3ccc(N4CCNCC4)cc3)n2)cc1 InChI=1S/C20H21N5O/c1-2-4-18(5-3-1)26-19-10-11-22-20(24-19)23-16-6-8-17(9-7-16)25-14-12-21-13-15-25/h1-11,21H,12-15H2,(H,22,23,24) WNCNQTOSMNPRSG-UHFFFAOYSA-N
5KW amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
5KW phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
5KW piperazine F3 fragment C1CNCCN1 InChI=1S/C4H10N2/c1-2-6-4-3-5-1/h5-6H,1-4H2 GLUUGHFHXGJENI-UHFFFAOYSA-N
5KW pyrimidine F4 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N
5KW Z57040482 F5 fragment CC(=O)Nc1ccccc1O InChI=1S/C8H9NO2/c1-6(10)9-7-4-2-3-5-8(7)11/h2-5,11H,1H3,(H,9,10) ADVGKWPZRIDURE-UHFFFAOYSA-N
5KW Z281802060 F6 fragment CNc1nccc(OC)n1 InChI=1S/C6H9N3O/c1-7-6-8-4-3-5(9-6)10-2/h3-4H,1-2H3,(H,7,8,9) OPBJFWASRUHSHW-UHFFFAOYSA-N
5KW Z54628578 F7 fragment CNc1ncccn1 InChI=1S/C5H7N3/c1-6-5-7-3-2-4-8-5/h2-4H,1H3,(H,6,7,8) BQNXHDSGGRTFNX-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
5KW N02 S1 1
5KW C03 S1 1
5KW C04 S1 1
5KW C05 S1 1
5KW C06 S1 1
5KW N07 S1 1
5KW C08 S1 1
5KW C09 S1 1
5KW C10 S1 1
5KW C11 S1 1
5KW C12 S1 1
5KW C13 S1 1
5KW N14 S1 1
5KW C15 S1 1
5KW N16 S1 1
5KW C17 S1 1
5KW C18 S1 1
5KW C20 S1 1
5KW O21 S1 1
5KW C22 S1 1
5KW C23 S1 1
5KW C24 S1 1
5KW C25 S1 1
5KW C26 S1 1
5KW C27 S1 1
5KW N32 S1 1
5KW N28 F1 1
5KW C29 F1 1
5KW O31 F1 1
5KW C30 F1 1
5KW C08 F2 1
5KW C11 F2 1
5KW C12 F2 1
5KW C13 F2 1
5KW C10 F2 1
5KW C09 F2 1
5KW C22 F2 2
5KW C27 F2 2
5KW C26 F2 2
5KW C25 F2 2
5KW C24 F2 2
5KW C23 F2 2
5KW N02 F3 1
5KW C03 F3 1
5KW C04 F3 1
5KW N07 F3 1
5KW C06 F3 1
5KW C05 F3 1
5KW C18 F4 1
5KW C20 F4 1
5KW N32 F4 1
5KW C15 F4 1
5KW N16 F4 1
5KW C17 F4 1
5KW C30 F5 1
5KW C29 F5 1
5KW O31 F5 1
5KW N28 F5 1
5KW C27 F5 1
5KW C26 F5 1
5KW C25 F5 1
5KW C24 F5 1
5KW C23 F5 1
5KW C22 F5 1
5KW O21 F5 1
5KW C13 F6 1
5KW N14 F6 1
5KW C15 F6 1
5KW N16 F6 1
5KW C17 F6 1
5KW C18 F6 1
5KW C20 F6 1
5KW O21 F6 1
5KW C22 F6 1
5KW N32 F6 1
5KW C13 F7 1
5KW N14 F7 1
5KW C15 F7 1
5KW N32 F7 1
5KW C20 F7 1
5KW C18 F7 1
5KW C17 F7 1
5KW N16 F7 1
#
_pdbe_chem_comp_rdkit_properties.comp_id 5KW
_pdbe_chem_comp_rdkit_properties.exactmw 486.134
_pdbe_chem_comp_rdkit_properties.amw 487.391
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 8
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 8
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 7
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 33
_pdbe_chem_comp_rdkit_properties.NumAtoms 57
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 10
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 1
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.261
_pdbe_chem_comp_rdkit_properties.NumRings 4
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 235.870
_pdbe_chem_comp_rdkit_properties.tpsa 82.620
_pdbe_chem_comp_rdkit_properties.CrippenClogP 2.148
_pdbe_chem_comp_rdkit_properties.CrippenMR 127.826
_pdbe_chem_comp_rdkit_properties.chi0v 17.268
_pdbe_chem_comp_rdkit_properties.chi1v 9.127
_pdbe_chem_comp_rdkit_properties.chi2v 3.760
_pdbe_chem_comp_rdkit_properties.chi3v 3.760
_pdbe_chem_comp_rdkit_properties.chi4v 2.196
_pdbe_chem_comp_rdkit_properties.chi0n 39.756
_pdbe_chem_comp_rdkit_properties.chi1n 20.265
_pdbe_chem_comp_rdkit_properties.chi2n 3.352
_pdbe_chem_comp_rdkit_properties.chi3n 3.352
_pdbe_chem_comp_rdkit_properties.chi4n 2.031
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.070
_pdbe_chem_comp_rdkit_properties.kappa1 7.729
_pdbe_chem_comp_rdkit_properties.kappa2 10.698
_pdbe_chem_comp_rdkit_properties.kappa3 6.042
_pdbe_chem_comp_rdkit_properties.Phi 2.506
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
5KW UniChem ZINC ZINC000584904819
5KW UniChem PubChem 132819860
5KW UniChem Nikkaji J3.609.768J
5KW UniChem BindingDb 50209656
5KW UniChem 'Probes And Drugs' PD138575
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
5KW C01 8.654 1.207 1.249 ETKDGv3 1
5KW N02 7.408 1.282 0.473 ETKDGv3 2
5KW C03 6.470 2.222 1.117 ETKDGv3 3
5KW C04 5.202 2.364 0.273 ETKDGv3 4
5KW C05 6.798 -0.058 0.370 ETKDGv3 5
5KW C06 5.538 -0.003 -0.497 ETKDGv3 6
5KW N07 4.634 1.040 0.000 ETKDGv3 7
5KW C08 3.205 0.878 -0.088 ETKDGv3 8
5KW C09 2.636 0.340 -1.182 ETKDGv3 9
5KW C10 1.169 0.185 -1.264 ETKDGv3 10
5KW C11 2.339 1.312 1.036 ETKDGv3 11
5KW C12 1.011 1.165 0.963 ETKDGv3 12
5KW C13 0.386 0.558 -0.235 ETKDGv3 13
5KW N14 -1.046 0.449 -0.297 ETKDGv3 14
5KW C15 -1.755 -0.638 -0.910 ETKDGv3 15
5KW N16 -1.133 -1.727 -1.267 ETKDGv3 16
5KW C17 -1.845 -2.833 -1.842 ETKDGv3 17
5KW C18 -3.171 -2.765 -1.998 ETKDGv3 18
5KW CL1 -4.061 -4.115 -2.679 ETKDGv3 19
5KW C20 -3.868 -1.536 -1.570 ETKDGv3 20
5KW O21 -5.257 -1.440 -1.725 ETKDGv3 21
5KW C22 -6.042 -0.417 -1.174 ETKDGv3 22
5KW C23 -6.949 0.324 -2.079 ETKDGv3 23
5KW C24 -7.675 1.350 -1.621 ETKDGv3 24
5KW C25 -7.581 1.746 -0.204 ETKDGv3 25
5KW C26 -6.788 1.064 0.631 ETKDGv3 26
5KW C27 -6.003 -0.096 0.143 ETKDGv3 27
5KW N28 -5.221 -0.840 1.090 ETKDGv3 28
5KW C29 -5.324 -2.263 1.249 ETKDGv3 29
5KW C30 -4.487 -2.963 2.271 ETKDGv3 30
5KW O31 -6.119 -2.933 0.534 ETKDGv3 31
5KW N32 -3.180 -0.550 -1.067 ETKDGv3 32
5KW H1 9.375 0.524 0.750 ETKDGv3 33
5KW H2 9.134 2.208 1.301 ETKDGv3 34
5KW H3 8.466 0.842 2.284 ETKDGv3 35
5KW H5 6.196 1.872 2.139 ETKDGv3 36
5KW H6 6.940 3.226 1.209 ETKDGv3 37
5KW H7 5.452 2.858 -0.691 ETKDGv3 38
5KW H8 4.478 3.012 0.812 ETKDGv3 39
5KW H9 7.513 -0.767 -0.103 ETKDGv3 40
5KW H10 6.534 -0.452 1.379 ETKDGv3 41
5KW H11 5.040 -0.998 -0.466 ETKDGv3 42
5KW H12 5.817 0.222 -1.549 ETKDGv3 43
5KW H13 3.240 0.033 -2.026 ETKDGv3 44
5KW H14 0.740 -0.205 -2.178 ETKDGv3 45
5KW H15 2.781 1.735 1.928 ETKDGv3 46
5KW H16 0.391 1.481 1.792 ETKDGv3 47
5KW H17 -1.612 1.154 0.227 ETKDGv3 48
5KW H18 -1.302 -3.721 -2.138 ETKDGv3 49
5KW H19 -7.013 0.042 -3.123 ETKDGv3 50
5KW H20 -8.329 1.895 -2.290 ETKDGv3 51
5KW H21 -8.159 2.585 0.160 ETKDGv3 52
5KW H22 -6.732 1.352 1.673 ETKDGv3 53
5KW H23 -4.704 -0.302 1.822 ETKDGv3 54
5KW H24 -4.861 -3.996 2.437 ETKDGv3 55
5KW H25 -4.531 -2.413 3.233 ETKDGv3 56
5KW CL2 -2.797 -3.042 1.718 ETKDGv3 57
#