data_5DG
#
_chem_comp.id 5DG
_chem_comp.name "4,4'-(2-{3-[(4-fluorophenyl)amino]phenyl}prop-1-ene-1,1-diyl)diphenol"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C27 H22 F N O2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2015-09-09
_chem_comp.pdbx_modified_date 2016-04-29
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 411.467
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 5DG
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 5DMF
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
5DG C01 C1 C 0 1 N N N N N N -17.136 -27.883 -5.185 -0.376 1.954 1.329 C01 5DG 1
5DG C02 C2 C 0 1 N N N N N N -18.256 -26.936 -5.572 -0.665 0.535 0.910 C02 5DG 2
5DG C03 C3 C 0 1 Y N N N N N -18.858 -27.074 -6.958 0.308 -0.529 1.196 C03 5DG 3
5DG C04 C4 C 0 1 Y N N N N N -19.211 -25.950 -7.688 -0.010 -1.548 2.101 C04 5DG 4
5DG C05 C5 C 0 1 Y N N N N N -19.758 -26.090 -8.954 0.906 -2.545 2.366 C05 5DG 5
5DG C06 C6 C 0 1 Y N N N N N -19.947 -27.352 -9.495 2.139 -2.542 1.742 C06 5DG 6
5DG C07 C7 C 0 1 Y N N N N N -19.596 -28.480 -8.767 2.467 -1.534 0.842 C07 5DG 7
5DG N08 N1 N 0 1 N N N N N N -19.781 -29.783 -9.309 3.716 -1.537 0.215 N08 5DG 8
5DG C09 C8 C 0 1 Y N N N N N -20.988 -30.179 -9.951 4.338 -0.327 -0.111 C09 5DG 9
5DG C10 C9 C 0 1 Y N N N N N -22.141 -29.417 -9.834 4.081 0.812 0.642 C10 5DG 10
5DG C11 C10 C 0 1 Y N N N N N -23.307 -29.820 -10.466 4.696 2.005 0.319 C11 5DG 11
5DG C12 C11 C 0 1 Y N N N N N -23.324 -30.988 -11.213 5.568 2.067 -0.755 C12 5DG 12
5DG F13 F1 F 0 1 N N N N N N -24.451 -31.376 -11.822 6.168 3.236 -1.070 F13 5DG 13
5DG C14 C12 C 0 1 Y N N N N N -22.174 -31.753 -11.327 5.825 0.934 -1.507 C14 5DG 14
5DG C15 C13 C 0 1 Y N N N N N -21.008 -31.349 -10.697 5.217 -0.264 -1.184 C15 5DG 15
5DG C16 C14 C 0 1 Y N N N N N -19.048 -28.337 -7.501 1.554 -0.530 0.562 C16 5DG 16
5DG C17 C15 C 0 1 N N N N N N -18.882 -26.187 -4.630 -1.824 0.240 0.270 C17 5DG 17
5DG C18 C16 C 0 1 Y N N N N N -18.173 -25.717 -3.375 -2.857 1.283 0.092 C18 5DG 18
5DG C19 C17 C 0 1 Y N N N N N -18.890 -25.648 -2.190 -3.190 1.728 -1.188 C19 5DG 19
5DG C20 C18 C 0 1 Y N N N N N -18.277 -25.216 -1.025 -4.154 2.700 -1.350 C20 5DG 20
5DG C21 C19 C 0 1 Y N N N N N -16.942 -24.848 -1.044 -4.794 3.237 -0.240 C21 5DG 21
5DG O22 O1 O 0 1 N N N N N N -16.320 -24.410 0.137 -5.743 4.195 -0.403 O22 5DG 22
5DG C23 C20 C 0 1 Y N N N N N -16.223 -24.912 -2.229 -4.466 2.796 1.035 C23 5DG 23
5DG C24 C21 C 0 1 Y N N N N N -16.839 -25.342 -3.395 -3.507 1.821 1.205 C24 5DG 24
5DG C25 C22 C 0 1 Y N N N N N -20.318 -25.738 -4.829 -2.054 -1.125 -0.251 C25 5DG 25
5DG C26 C23 C 0 1 Y N N N N N -20.613 -24.382 -4.854 -3.053 -1.927 0.303 C26 5DG 26
5DG C27 C24 C 0 1 Y N N N N N -21.922 -23.958 -5.031 -3.265 -3.198 -0.186 C27 5DG 27
5DG C28 C25 C 0 1 Y N N N N N -22.936 -24.891 -5.184 -2.485 -3.682 -1.228 C28 5DG 28
5DG O29 O2 O 0 1 N N N N N N -24.265 -24.462 -5.366 -2.693 -4.938 -1.704 O29 5DG 29
5DG C30 C26 C 0 1 Y N N N N N -22.642 -26.246 -5.158 -1.490 -2.888 -1.782 C30 5DG 30
5DG C31 C27 C 0 1 Y N N N N N -21.333 -26.670 -4.979 -1.276 -1.613 -1.303 C31 5DG 31
5DG H1 H1 H 0 1 N N N N N N -16.806 -27.662 -4.159 -0.762 2.122 2.334 H1 5DG 32
5DG H2 H2 H 0 1 N N N N N N -17.498 -28.920 -5.237 0.701 2.122 1.320 H2 5DG 33
5DG H3 H3 H 0 1 N N N N N N -16.291 -27.754 -5.878 -0.857 2.642 0.635 H3 5DG 34
5DG H5 H5 H 0 1 N N N N N N -19.060 -24.965 -7.271 -0.972 -1.554 2.591 H5 5DG 35
5DG H6 H6 H 0 1 N N N N N N -20.038 -25.214 -9.520 0.658 -3.331 3.065 H6 5DG 36
5DG H7 H7 H 0 1 N N N N N N -20.368 -27.458 -10.484 2.852 -3.326 1.956 H7 5DG 37
5DG H8 H8 H 0 1 N N N N N N -19.035 -30.445 -9.236 4.152 -2.378 0.006 H8 5DG 38
5DG H9 H9 H 0 1 N N N N N N -22.130 -28.509 -9.250 3.401 0.764 1.480 H9 5DG 39
5DG H10 H10 H 0 1 N N N N N N -24.203 -29.224 -10.376 4.496 2.891 0.904 H10 5DG 40
5DG H11 H11 H 0 1 N N N N N N -22.187 -32.664 -11.907 6.505 0.984 -2.345 H11 5DG 41
5DG H12 H12 H 0 1 N N N N N N -20.113 -31.946 -10.787 5.418 -1.148 -1.771 H12 5DG 42
5DG H13 H13 H 0 1 N N N N N N -18.768 -29.213 -6.935 1.807 0.253 -0.137 H13 5DG 43
5DG H15 H15 H 0 1 N N N N N N -19.932 -25.933 -2.175 -2.692 1.312 -2.052 H15 5DG 44
5DG H16 H16 H 0 1 N N N N N N -18.839 -25.166 -0.104 -4.411 3.045 -2.340 H16 5DG 45
5DG H17 H17 H 0 1 N N N N N N -16.947 -24.426 0.850 -6.640 3.846 -0.507 H17 5DG 46
5DG H18 H18 H 0 1 N N N N N N -15.182 -24.626 -2.243 -4.966 3.216 1.896 H18 5DG 47
5DG H19 H19 H 0 1 N N N N N N -16.279 -25.385 -4.318 -3.256 1.476 2.197 H19 5DG 48
5DG H20 H20 H 0 1 N N N N N N -19.822 -23.656 -4.735 -3.659 -1.551 1.114 H20 5DG 49
5DG H21 H21 H 0 1 N N N N N N -22.151 -22.903 -5.050 -4.037 -3.819 0.243 H21 5DG 50
5DG H22 H22 H 0 1 N N N N N N -24.295 -23.513 -5.360 -2.173 -5.619 -1.255 H22 5DG 51
5DG H23 H23 H 0 1 N N N N N N -23.433 -26.972 -5.277 -0.885 -3.268 -2.593 H23 5DG 52
5DG H24 H24 H 0 1 N N N N N N -21.105 -27.725 -4.957 -0.502 -0.996 -1.734 H24 5DG 53
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
5DG F13 C12 SING N N 1
5DG C14 C12 DOUB Y N 2
5DG C14 C15 SING Y N 3
5DG C12 C11 SING Y N 4
5DG C15 C09 DOUB Y N 5
5DG C11 C10 DOUB Y N 6
5DG C09 C10 SING Y N 7
5DG C09 N08 SING N N 8
5DG C06 C05 DOUB Y N 9
5DG C06 C07 SING Y N 10
5DG N08 C07 SING N N 11
5DG C05 C04 SING Y N 12
5DG C07 C16 DOUB Y N 13
5DG C04 C03 DOUB Y N 14
5DG C16 C03 SING Y N 15
5DG C03 C02 SING N N 16
5DG C02 C01 SING N N 17
5DG C02 C17 DOUB N N 18
5DG O29 C28 SING N N 19
5DG C28 C30 DOUB Y N 20
5DG C28 C27 SING Y N 21
5DG C30 C31 SING Y N 22
5DG C27 C26 DOUB Y N 23
5DG C31 C25 DOUB Y N 24
5DG C26 C25 SING Y N 25
5DG C25 C17 SING N N 26
5DG C17 C18 SING N N 27
5DG C24 C18 DOUB Y N 28
5DG C24 C23 SING Y N 29
5DG C18 C19 SING Y N 30
5DG C23 C21 DOUB Y N 31
5DG C19 C20 DOUB Y N 32
5DG C21 C20 SING Y N 33
5DG C21 O22 SING N N 34
5DG C01 H1 SING N N 35
5DG C01 H2 SING N N 36
5DG C01 H3 SING N N 37
5DG C04 H5 SING N N 38
5DG C05 H6 SING N N 39
5DG C06 H7 SING N N 40
5DG N08 H8 SING N N 41
5DG C10 H9 SING N N 42
5DG C11 H10 SING N N 43
5DG C14 H11 SING N N 44
5DG C15 H12 SING N N 45
5DG C16 H13 SING N N 46
5DG C19 H15 SING N N 47
5DG C20 H16 SING N N 48
5DG O22 H17 SING N N 49
5DG C23 H18 SING N N 50
5DG C24 H19 SING N N 51
5DG C26 H20 SING N N 52
5DG C27 H21 SING N N 53
5DG O29 H22 SING N N 54
5DG C30 H23 SING N N 55
5DG C31 H24 SING N N 56
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
5DG SMILES ACDLabs 12.01 C\C(=C(/c1ccc(O)cc1)c2ccc(cc2)O)c3cccc(c3)Nc4ccc(F)cc4
5DG InChI InChI 1.03 InChI=1S/C27H22FNO2/c1-18(21-3-2-4-24(17-21)29-23-11-9-22(28)10-12-23)27(19-5-13-25(30)14-6-19)20-7-15-26(31)16-8-20/h2-17,29-31H,1H3
5DG InChIKey InChI 1.03 VYLVDNORDIJWQC-UHFFFAOYSA-N
5DG SMILES_CANONICAL CACTVS 3.385 CC(c1cccc(Nc2ccc(F)cc2)c1)=C(c3ccc(O)cc3)c4ccc(O)cc4
5DG SMILES CACTVS 3.385 CC(c1cccc(Nc2ccc(F)cc2)c1)=C(c3ccc(O)cc3)c4ccc(O)cc4
5DG SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 CC(=C(c1ccc(cc1)O)c2ccc(cc2)O)c3cccc(c3)Nc4ccc(cc4)F
5DG SMILES "OpenEye OEToolkits" 1.9.2 CC(=C(c1ccc(cc1)O)c2ccc(cc2)O)c3cccc(c3)Nc4ccc(cc4)F
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
5DG "SYSTEMATIC NAME" ACDLabs 12.01 "4,4'-(2-{3-[(4-fluorophenyl)amino]phenyl}prop-1-ene-1,1-diyl)diphenol"
5DG "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 4-[2-[3-[(4-fluorophenyl)amino]phenyl]-1-(4-hydroxyphenyl)prop-1-enyl]phenol
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
5DG 'Create component' 2015-09-09 RCSB
5DG 'Initial release' 2016-05-04 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
5DG C01 C 5.598 2.393 1
5DG C02 C 6.897 1.643 2
5DG C03 C 6.897 0.142 3
5DG C04 C 8.196 -0.608 4
5DG C05 C 8.196 -2.107 5
5DG C06 C 6.897 -2.857 6
5DG C07 C 5.598 -2.107 7
5DG N08 N 4.299 -2.857 8
5DG C09 C 4.299 -4.357 9
5DG C10 C 5.598 -5.107 10
5DG C11 C 5.598 -6.607 11
5DG C12 C 4.299 -7.357 12
5DG F13 F 4.299 -8.857 13
5DG C14 C 3.000 -6.607 14
5DG C15 C 3.000 -5.107 15
5DG C16 C 5.598 -0.608 16
5DG C17 C 8.196 2.393 17
5DG C18 C 9.495 1.643 18
5DG C19 C 10.794 2.393 19
5DG C20 C 12.093 1.643 20
5DG C21 C 12.093 0.142 21
5DG O22 O 13.392 -0.608 22
5DG C23 C 10.794 -0.608 23
5DG C24 C 9.495 0.142 24
5DG C25 C 8.196 3.893 25
5DG C26 C 6.897 4.643 26
5DG C27 C 6.897 6.143 27
5DG C28 C 8.196 6.893 28
5DG O29 O 8.196 8.393 29
5DG C30 C 9.495 6.143 30
5DG C31 C 9.495 4.643 31
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
5DG F13 C12 SINGLE NONE 1
5DG C14 C12 DOUBLE NONE 2
5DG C14 C15 SINGLE NONE 3
5DG C12 C11 SINGLE NONE 4
5DG C15 C09 DOUBLE NONE 5
5DG C11 C10 DOUBLE NONE 6
5DG C09 C10 SINGLE NONE 7
5DG C09 N08 SINGLE NONE 8
5DG C06 C05 SINGLE NONE 9
5DG C06 C07 DOUBLE NONE 10
5DG N08 C07 SINGLE NONE 11
5DG C05 C04 DOUBLE NONE 12
5DG C07 C16 SINGLE NONE 13
5DG C04 C03 SINGLE NONE 14
5DG C16 C03 DOUBLE NONE 15
5DG C03 C02 SINGLE NONE 16
5DG C02 C01 SINGLE NONE 17
5DG C02 C17 DOUBLE NONE 18
5DG O29 C28 SINGLE NONE 19
5DG C28 C30 DOUBLE NONE 20
5DG C28 C27 SINGLE NONE 21
5DG C30 C31 SINGLE NONE 22
5DG C27 C26 DOUBLE NONE 23
5DG C31 C25 DOUBLE NONE 24
5DG C26 C25 SINGLE NONE 25
5DG C25 C17 SINGLE NONE 26
5DG C17 C18 SINGLE NONE 27
5DG C24 C18 SINGLE NONE 28
5DG C24 C23 DOUBLE NONE 29
5DG C18 C19 DOUBLE NONE 30
5DG C23 C21 SINGLE NONE 31
5DG C19 C20 SINGLE NONE 32
5DG C21 C20 DOUBLE NONE 33
5DG C21 O22 SINGLE NONE 34
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
5DG MurckoScaffold S1 scaffold C(=C(c1ccccc1)c1ccccc1)c1cccc(Nc2ccccc2)c1 InChI=1S/C26H21N/c1-4-12-22(13-5-1)26(23-14-6-2-7-15-23)20-21-11-10-18-25(19-21)27-24-16-8-3-9-17-24/h1-20,27H MCCSTYGRXIZGJN-UHFFFAOYSA-N
5DG phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
5DG C02 S1 1
5DG C03 S1 1
5DG C04 S1 1
5DG C05 S1 1
5DG C06 S1 1
5DG C07 S1 1
5DG N08 S1 1
5DG C09 S1 1
5DG C10 S1 1
5DG C11 S1 1
5DG C12 S1 1
5DG C14 S1 1
5DG C15 S1 1
5DG C16 S1 1
5DG C17 S1 1
5DG C18 S1 1
5DG C19 S1 1
5DG C20 S1 1
5DG C21 S1 1
5DG C23 S1 1
5DG C24 S1 1
5DG C25 S1 1
5DG C26 S1 1
5DG C27 S1 1
5DG C28 S1 1
5DG C30 S1 1
5DG C31 S1 1
5DG C03 F1 1
5DG C04 F1 1
5DG C05 F1 1
5DG C06 F1 1
5DG C07 F1 1
5DG C16 F1 1
5DG C09 F1 2
5DG C15 F1 2
5DG C14 F1 2
5DG C12 F1 2
5DG C11 F1 2
5DG C10 F1 2
5DG C18 F1 3
5DG C24 F1 3
5DG C23 F1 3
5DG C21 F1 3
5DG C20 F1 3
5DG C19 F1 3
5DG C25 F1 4
5DG C31 F1 4
5DG C30 F1 4
5DG C28 F1 4
5DG C27 F1 4
5DG C26 F1 4
#
_pdbe_chem_comp_rdkit_properties.comp_id 5DG
_pdbe_chem_comp_rdkit_properties.exactmw 411.163
_pdbe_chem_comp_rdkit_properties.amw 411.476
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 3
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 3
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 8
_pdbe_chem_comp_rdkit_properties.NumHBD 3
_pdbe_chem_comp_rdkit_properties.NumHBA 3
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 31
_pdbe_chem_comp_rdkit_properties.NumAtoms 53
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 4
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.037
_pdbe_chem_comp_rdkit_properties.NumRings 4
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 4
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 211.453
_pdbe_chem_comp_rdkit_properties.tpsa 52.490
_pdbe_chem_comp_rdkit_properties.CrippenClogP 5.109
_pdbe_chem_comp_rdkit_properties.CrippenMR 120.262
_pdbe_chem_comp_rdkit_properties.chi0v 15.142
_pdbe_chem_comp_rdkit_properties.chi1v 8.294
_pdbe_chem_comp_rdkit_properties.chi2v 3.621
_pdbe_chem_comp_rdkit_properties.chi3v 3.621
_pdbe_chem_comp_rdkit_properties.chi4v 2.325
_pdbe_chem_comp_rdkit_properties.chi0n 37.142
_pdbe_chem_comp_rdkit_properties.chi1n 19.058
_pdbe_chem_comp_rdkit_properties.chi2n 3.621
_pdbe_chem_comp_rdkit_properties.chi3n 3.621
_pdbe_chem_comp_rdkit_properties.chi4n 2.325
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -4.050
_pdbe_chem_comp_rdkit_properties.kappa1 6.725
_pdbe_chem_comp_rdkit_properties.kappa2 8.757
_pdbe_chem_comp_rdkit_properties.kappa3 4.755
_pdbe_chem_comp_rdkit_properties.Phi 1.900
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
5DG UniChem ZINC ZINC000584904970
5DG UniChem PubChem 118988375
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
5DG C01 -1.096 -3.227 -0.122 ETKDGv3 1
5DG C02 -0.947 -1.742 0.109 ETKDGv3 2
5DG C03 0.406 -1.244 0.463 ETKDGv3 3
5DG C04 1.092 -1.763 1.670 ETKDGv3 4
5DG C05 2.300 -1.301 2.010 ETKDGv3 5
5DG C06 2.962 -0.274 1.181 ETKDGv3 6
5DG C07 2.368 0.182 0.063 ETKDGv3 7
5DG N08 2.969 1.212 -0.740 ETKDGv3 8
5DG C09 4.384 1.357 -0.947 ETKDGv3 9
5DG C10 5.289 0.176 -0.934 ETKDGv3 10
5DG C11 6.601 0.329 -1.154 ETKDGv3 11
5DG C12 7.157 1.670 -1.422 ETKDGv3 12
5DG F13 8.486 1.820 -1.641 ETKDGv3 13
5DG C14 6.346 2.734 -1.459 ETKDGv3 14
5DG C15 4.896 2.570 -1.221 ETKDGv3 15
5DG C16 1.023 -0.323 -0.301 ETKDGv3 16
5DG C17 -1.999 -0.893 -0.048 ETKDGv3 17
5DG C18 -3.311 -1.366 -0.552 ETKDGv3 18
5DG C19 -3.440 -1.851 -1.800 ETKDGv3 19
5DG C20 -4.763 -2.285 -2.297 ETKDGv3 20
5DG C21 -5.845 -2.178 -1.514 ETKDGv3 21
5DG O22 -7.087 -2.588 -1.992 ETKDGv3 22
5DG C23 -5.712 -1.623 -0.148 ETKDGv3 23
5DG C24 -4.514 -1.235 0.306 ETKDGv3 24
5DG C25 -1.909 0.539 0.340 ETKDGv3 25
5DG C26 -1.450 0.922 1.700 ETKDGv3 26
5DG C27 -1.364 2.212 2.046 ETKDGv3 27
5DG C28 -1.739 3.267 1.078 ETKDGv3 28
5DG O29 -1.647 4.612 1.429 ETKDGv3 29
5DG C30 -2.172 2.926 -0.143 ETKDGv3 30
5DG C31 -2.268 1.503 -0.527 ETKDGv3 31
5DG H1 -2.019 -3.607 0.365 ETKDGv3 32
5DG H2 -1.136 -3.437 -1.211 ETKDGv3 33
5DG H3 -0.238 -3.790 0.300 ETKDGv3 34
5DG H5 0.608 -2.505 2.293 ETKDGv3 35
5DG H6 2.792 -1.671 2.900 ETKDGv3 36
5DG H7 3.919 0.117 1.502 ETKDGv3 37
5DG H8 2.328 1.882 -1.224 ETKDGv3 38
5DG H9 4.892 -0.816 -0.766 ETKDGv3 39
5DG H10 7.256 -0.533 -1.146 ETKDGv3 40
5DG H11 6.748 3.719 -1.662 ETKDGv3 41
5DG H12 4.254 3.441 -1.258 ETKDGv3 42
5DG H13 0.542 0.058 -1.194 ETKDGv3 43
5DG H15 -2.584 -1.915 -2.460 ETKDGv3 44
5DG H16 -4.851 -2.684 -3.299 ETKDGv3 45
5DG H17 -7.918 -2.516 -1.418 ETKDGv3 46
5DG H18 -6.585 -1.529 0.485 ETKDGv3 47
5DG H19 -4.425 -0.829 1.306 ETKDGv3 48
5DG H20 -1.189 0.158 2.422 ETKDGv3 49
5DG H21 -1.026 2.483 3.038 ETKDGv3 50
5DG H22 -1.323 4.893 2.346 ETKDGv3 51
5DG H23 -2.451 3.691 -0.856 ETKDGv3 52
5DG H24 -2.612 1.251 -1.523 ETKDGv3 53
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