data_4ZX
#
_chem_comp.id 4ZX
_chem_comp.name
6-chloranyl-2-oxidanylidene-N-[(1S,5R)-8-[4-[(phenylmethyl)amino]piperidin-1-yl]sulfonyl-8-azabicyclo[3.2.1]octan-3-yl]-1,3-dihydroindole-5-carboxamide
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C28 H34 Cl N5 O4 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2015-07-02
_chem_comp.pdbx_modified_date 2015-09-04
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 572.119
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 4ZX
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 5CCM
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
4ZX CL1 CL1 CL 0 0 N N N N N N 15.780 3.203 18.147 -5.607 3.830 0.045 CL01 4ZX 1
4ZX C02 C1 C 0 1 Y N N N N N 15.624 4.689 17.266 -6.085 2.162 -0.018 C02 4ZX 2
4ZX C03 C2 C 0 1 Y N N N N N 14.627 5.546 17.737 -7.421 1.833 -0.069 C03 4ZX 3
4ZX C05 C3 C 0 1 Y N N N N N 14.432 6.742 17.090 -7.815 0.495 -0.120 C05 4ZX 4
4ZX C06 C4 C 0 1 Y N N N N N 15.186 7.124 15.994 -6.842 -0.500 -0.118 C06 4ZX 5
4ZX C07 C5 C 0 1 N N N N N N 14.725 8.462 15.526 -7.582 -1.817 -0.180 C07 4ZX 6
4ZX C10 C6 C 0 1 N N N N N N 13.601 8.770 16.508 -9.041 -1.416 -0.215 C10 4ZX 7
4ZX O11 O1 O 0 1 N N N N N N 12.908 9.761 16.515 -9.993 -2.165 -0.268 O11 4ZX 8
4ZX N12 N1 N 0 1 N N N N N N 13.508 7.713 17.391 -9.084 -0.073 -0.177 N12 4ZX 9
4ZX C14 C7 C 0 1 Y N N N N N 16.184 6.297 15.512 -5.508 -0.184 -0.067 C14 4ZX 10
4ZX C16 C8 C 0 1 Y N N N N N 16.421 5.066 16.156 -5.112 1.157 -0.021 C16 4ZX 11
4ZX C17 C9 C 0 1 N N N N N N 17.467 4.210 15.548 -3.681 1.509 0.034 C17 4ZX 12
4ZX O18 O2 O 0 1 N N N N N N 17.560 4.189 14.330 -3.342 2.676 0.074 O18 4ZX 13
4ZX N19 N2 N 0 1 N N N N N N 18.294 3.380 16.235 -2.748 0.536 0.041 N19 4ZX 14
4ZX C21 C10 C 0 1 N N N N N N 19.312 2.493 15.662 -1.326 0.885 0.095 C21 4ZX 15
4ZX C23 C11 C 0 1 N N N N N N 18.656 1.280 14.940 -0.619 0.337 -1.148 C23 4ZX 16
4ZX C26 C12 C 0 1 N N S N N N 18.525 0.002 15.788 -0.644 -1.199 -1.099 C26 4ZX 17
4ZX C28 C13 C 0 1 N N N N N N 17.605 0.161 16.988 -2.088 -1.638 -0.763 C28 4ZX 18
4ZX C31 C14 C 0 1 N N N N N N 18.494 0.806 18.047 -2.138 -1.675 0.779 C31 4ZX 19
4ZX C34 C15 C 0 1 N N R N N N 19.919 0.813 17.480 -0.720 -1.255 1.230 C34 4ZX 20
4ZX C36 C16 C 0 1 N N N N N N 20.344 2.085 16.731 -0.701 0.277 1.354 C36 4ZX 21
4ZX N39 N3 N 0 1 N N N N N N 19.842 -0.190 16.420 0.149 -1.615 0.083 N39 4ZX 22
4ZX S40 S1 S 0 1 N N N N N N 20.433 -1.717 16.703 1.649 -2.316 0.115 S40 4ZX 23
4ZX O41 O3 O 0 1 N N N N N N 21.768 -1.524 17.240 1.742 -3.008 1.353 O41 4ZX 24
4ZX O42 O4 O 0 1 N N N N N N 19.333 -2.353 17.414 1.823 -2.948 -1.145 O42 4ZX 25
4ZX N43 N4 N 0 1 N N N N N N 20.596 -2.304 15.148 2.761 -1.090 0.181 N43 4ZX 26
4ZX C44 C17 C 0 1 N N N N N N 21.506 -1.571 14.244 3.222 -0.567 1.474 C44 4ZX 27
4ZX C47 C18 C 0 1 N N N N N N 22.926 -2.097 14.419 4.753 -0.618 1.509 C47 4ZX 28
4ZX C50 C19 C 0 1 N N N N N N 22.940 -3.618 14.244 5.312 0.125 0.294 C50 4ZX 29
4ZX C52 C20 C 0 1 N N N N N N 21.879 -4.373 15.070 4.835 -0.559 -0.989 C52 4ZX 30
4ZX C55 C21 C 0 1 N N N N N N 20.496 -3.759 14.937 3.309 -0.510 -1.052 C55 4ZX 31
4ZX N58 N5 N 0 1 N N N N N N 24.279 -4.144 14.413 6.780 0.107 0.342 N58 4ZX 32
4ZX C60 C22 C 0 1 N N N N N N 25.004 -4.089 15.675 7.346 1.241 -0.401 C60 4ZX 33
4ZX C63 C23 C 0 1 Y N N N N N 26.439 -4.422 15.377 8.850 1.189 -0.330 C63 4ZX 34
4ZX C64 C24 C 0 1 Y N N N N N 26.891 -5.750 15.479 9.564 0.501 -1.293 C64 4ZX 35
4ZX C66 C25 C 0 1 Y N N N N N 28.223 -6.050 15.184 10.944 0.452 -1.227 C66 4ZX 36
4ZX C68 C26 C 0 1 Y N N N N N 29.100 -5.040 14.780 11.610 1.091 -0.199 C68 4ZX 37
4ZX C70 C27 C 0 1 Y N N N N N 28.656 -3.719 14.670 10.896 1.779 0.765 C70 4ZX 38
4ZX C72 C28 C 0 1 Y N N N N N 27.326 -3.411 14.964 9.517 1.833 0.696 C72 4ZX 39
4ZX H1 H1 H 0 1 N N N N N N 14.023 5.275 18.590 -8.167 2.614 -0.070 H1 4ZX 40
4ZX H2 H2 H 0 1 N N N N N N 15.530 9.208 15.593 -7.314 -2.364 -1.085 H2 4ZX 41
4ZX H3 H3 H 0 1 N N N N N N 14.352 8.417 14.492 -7.371 -2.416 0.706 H3 4ZX 42
4ZX H4 H4 H 0 1 N N N N N N 12.856 7.661 18.148 -9.906 0.441 -0.188 H4 4ZX 43
4ZX H5 H5 H 0 1 N N N N N N 16.773 6.590 14.655 -4.765 -0.968 -0.066 H5 4ZX 44
4ZX H6 H6 H 0 1 N N N N N N 18.199 3.373 17.230 -3.018 -0.395 0.009 H6 4ZX 45
4ZX H7 H7 H 0 1 N N N N N N 19.857 3.061 14.893 -1.220 1.969 0.125 H7 4ZX 46
4ZX H8 H8 H 0 1 N N N N N N 17.647 1.580 14.620 -1.135 0.683 -2.043 H8 4ZX 47
4ZX H9 H9 H 0 1 N N N N N N 19.265 1.040 14.056 0.414 0.685 -1.163 H9 4ZX 48
4ZX H10 H10 H 0 1 N N N N N N 18.233 -0.858 15.168 -0.273 -1.645 -2.022 H10 4ZX 49
4ZX H11 H11 H 0 1 N N N N N N 16.752 0.811 16.744 -2.805 -0.913 -1.149 H11 4ZX 50
4ZX H12 H12 H 0 1 N N N N N N 17.235 -0.817 17.330 -2.289 -2.627 -1.173 H12 4ZX 51
4ZX H13 H13 H 0 1 N N N N N N 18.160 1.835 18.247 -2.880 -0.968 1.152 H13 4ZX 52
4ZX H14 H14 H 0 1 N N N N N N 18.459 0.222 18.978 -2.366 -2.682 1.127 H14 4ZX 53
4ZX H15 H15 H 0 1 N N N N N N 20.654 0.545 18.253 -0.416 -1.754 2.150 H15 4ZX 54
4ZX H16 H16 H 0 1 N N N N N N 21.311 1.902 16.240 0.329 0.622 1.454 H16 4ZX 55
4ZX H17 H17 H 0 1 N N N N N N 20.449 2.906 17.455 -1.275 0.579 2.230 H17 4ZX 56
4ZX H18 H18 H 0 1 N N N N N N 21.479 -0.499 14.487 2.889 0.464 1.591 H18 4ZX 57
4ZX H19 H19 H 0 1 N N N N N N 21.186 -1.719 13.202 2.818 -1.178 2.281 H19 4ZX 58
4ZX H20 H20 H 0 1 N N N N N N 23.289 -1.842 15.426 5.112 -0.144 2.422 H20 4ZX 59
4ZX H21 H21 H 0 1 N N N N N N 23.582 -1.636 13.665 5.083 -1.657 1.484 H21 4ZX 60
4ZX H22 H22 H 0 1 N N N N N N 22.669 -3.794 13.193 4.962 1.158 0.307 H22 4ZX 61
4ZX H23 H23 H 0 1 N N N N N N 21.837 -5.416 14.723 5.253 -0.043 -1.854 H23 4ZX 62
4ZX H24 H24 H 0 1 N N N N N N 22.175 -4.351 16.129 5.165 -1.598 -0.992 H24 4ZX 63
4ZX H25 H25 H 0 1 N N N N N N 20.098 -3.960 13.931 2.961 -1.082 -1.913 H25 4ZX 64
4ZX H26 H26 H 0 1 N N N N N N 19.824 -4.196 15.691 2.980 0.525 -1.141 H26 4ZX 65
4ZX H27 H27 H 0 1 N N N N N N 24.227 -5.112 14.168 7.111 0.097 1.295 H27 4ZX 66
4ZX H29 H29 H 0 1 N N N N N N 24.933 -3.080 16.107 7.029 1.188 -1.442 H29 4ZX 67
4ZX H30 H30 H 0 1 N N N N N N 24.586 -4.821 16.382 6.994 2.175 0.038 H30 4ZX 68
4ZX H31 H31 H 0 1 N N N N N N 26.212 -6.533 15.784 9.044 0.001 -2.097 H31 4ZX 69
4ZX H32 H32 H 0 1 N N N N N N 28.577 -7.067 15.269 11.502 -0.086 -1.980 H32 4ZX 70
4ZX H33 H33 H 0 1 N N N N N N 30.128 -5.281 14.551 12.688 1.052 -0.147 H33 4ZX 71
4ZX H34 H34 H 0 1 N N N N N N 29.338 -2.941 14.359 11.417 2.278 1.569 H34 4ZX 72
4ZX H35 H35 H 0 1 N N N N N N 26.977 -2.393 14.874 8.959 2.370 1.449 H35 4ZX 73
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
4ZX C50 N58 SING N N 1
4ZX C50 C47 SING N N 2
4ZX C50 C52 SING N N 3
4ZX C44 C47 SING N N 4
4ZX C44 N43 SING N N 5
4ZX O18 C17 DOUB N N 6
4ZX N58 C60 SING N N 7
4ZX C70 C68 DOUB Y N 8
4ZX C70 C72 SING Y N 9
4ZX C68 C66 SING Y N 10
4ZX C55 C52 SING N N 11
4ZX C55 N43 SING N N 12
4ZX C23 C21 SING N N 13
4ZX C23 C26 SING N N 14
4ZX C72 C63 DOUB Y N 15
4ZX N43 S40 SING N N 16
4ZX C66 C64 DOUB Y N 17
4ZX C63 C64 SING Y N 18
4ZX C63 C60 SING N N 19
4ZX C14 C06 DOUB Y N 20
4ZX C14 C16 SING Y N 21
4ZX C07 C06 SING N N 22
4ZX C07 C10 SING N N 23
4ZX C17 C16 SING N N 24
4ZX C17 N19 SING N N 25
4ZX C21 N19 SING N N 26
4ZX C21 C36 SING N N 27
4ZX C26 N39 SING N N 28
4ZX C26 C28 SING N N 29
4ZX C06 C05 SING Y N 30
4ZX C16 C02 DOUB Y N 31
4ZX N39 S40 SING N N 32
4ZX N39 C34 SING N N 33
4ZX C10 O11 DOUB N N 34
4ZX C10 N12 SING N N 35
4ZX S40 O41 DOUB N N 36
4ZX S40 O42 DOUB N N 37
4ZX C36 C34 SING N N 38
4ZX C28 C31 SING N N 39
4ZX C05 N12 SING N N 40
4ZX C05 C03 DOUB Y N 41
4ZX C02 C03 SING Y N 42
4ZX C02 CL1 SING N N 43
4ZX C34 C31 SING N N 44
4ZX C03 H1 SING N N 45
4ZX C07 H2 SING N N 46
4ZX C07 H3 SING N N 47
4ZX N12 H4 SING N N 48
4ZX C14 H5 SING N N 49
4ZX N19 H6 SING N N 50
4ZX C21 H7 SING N N 51
4ZX C23 H8 SING N N 52
4ZX C23 H9 SING N N 53
4ZX C26 H10 SING N N 54
4ZX C28 H11 SING N N 55
4ZX C28 H12 SING N N 56
4ZX C31 H13 SING N N 57
4ZX C31 H14 SING N N 58
4ZX C34 H15 SING N N 59
4ZX C36 H16 SING N N 60
4ZX C36 H17 SING N N 61
4ZX C44 H18 SING N N 62
4ZX C44 H19 SING N N 63
4ZX C47 H20 SING N N 64
4ZX C47 H21 SING N N 65
4ZX C50 H22 SING N N 66
4ZX C52 H23 SING N N 67
4ZX C52 H24 SING N N 68
4ZX C55 H25 SING N N 69
4ZX C55 H26 SING N N 70
4ZX N58 H27 SING N N 71
4ZX C60 H29 SING N N 72
4ZX C60 H30 SING N N 73
4ZX C64 H31 SING N N 74
4ZX C66 H32 SING N N 75
4ZX C68 H33 SING N N 76
4ZX C70 H34 SING N N 77
4ZX C72 H35 SING N N 78
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
4ZX InChI InChI 1.03 InChI=1S/C28H34ClN5O4S/c29-25-16-26-19(13-27(35)32-26)12-24(25)28(36)31-21-14-22-6-7-23(15-21)34(22)39(37,38)33-10-8-20(9-11-33)30-17-18-4-2-1-3-5-18/h1-5,12,16,20-23,30H,6-11,13-15,17H2,(H,31,36)(H,32,35)/t21-,22+,23-
4ZX InChIKey InChI 1.03 SSDPURPCLGSTBN-NUNAXRQHSA-N
4ZX SMILES_CANONICAL CACTVS 3.385 Clc1cc2NC(=O)Cc2cc1C(=O)N[C@@H]3C[C@@H]4CC[C@H](C3)N4[S](=O)(=O)N5CC[C@H](CC5)NCc6ccccc6
4ZX SMILES CACTVS 3.385 Clc1cc2NC(=O)Cc2cc1C(=O)N[CH]3C[CH]4CC[CH](C3)N4[S](=O)(=O)N5CC[CH](CC5)NCc6ccccc6
4ZX SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 c1ccc(cc1)CNC2CCN(CC2)S(=O)(=O)N3[C@@H]4CC[C@H]3CC(C4)NC(=O)c5cc6c(cc5Cl)NC(=O)C6
4ZX SMILES "OpenEye OEToolkits" 1.9.2 c1ccc(cc1)CNC2CCN(CC2)S(=O)(=O)N3C4CCC3CC(C4)NC(=O)c5cc6c(cc5Cl)NC(=O)C6
#
_pdbx_chem_comp_identifier.comp_id 4ZX
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 1.9.2
_pdbx_chem_comp_identifier.identifier
6-chloranyl-2-oxidanylidene-N-[(1S,5R)-8-[4-[(phenylmethyl)amino]piperidin-1-yl]sulfonyl-8-azabicyclo[3.2.1]octan-3-yl]-1,3-dihydroindole-5-carboxamide
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
4ZX 'Create component' 2015-07-02 RCSB
4ZX 'Initial release' 2015-09-09 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
4ZX CL1 Cl 1.568 1.803 1
4ZX C02 C 2.861 1.046 2
4ZX C03 C 4.166 1.785 3
4ZX C05 C 5.455 1.034 4
4ZX C06 C 5.453 -0.465 5
4ZX C07 C 6.877 -0.936 6
4ZX C10 C 7.765 0.278 7
4ZX O11 O 9.263 0.274 8
4ZX N12 N 6.885 1.489 9
4ZX C14 C 4.143 -1.213 10
4ZX C16 C 2.849 -0.451 11
4ZX C17 C 1.763 -0.863 12
4ZX O18 O 0.640 0.004 13
4ZX N19 N 1.655 -1.872 14
4ZX C21 C 2.704 -2.603 15
4ZX C23 C 4.500 -2.412 16
4ZX C26 C 4.958 -3.696 17
4ZX C28 C 5.761 -4.963 18
4ZX C31 C 4.642 -5.998 19
4ZX C34 C 3.428 -5.089 20
4ZX C36 C 2.224 -4.486 21
4ZX N39 N 3.910 -4.127 22
4ZX S40 S -0.853 -2.120 23
4ZX O41 O -1.838 -3.328 24
4ZX O42 O -0.277 -0.767 25
4ZX N43 N -2.701 -0.509 26
4ZX C44 C -4.085 -1.076 27
4ZX C47 C -5.269 -0.156 28
4ZX C50 C -5.074 1.331 29
4ZX C52 C -3.685 1.900 30
4ZX C55 C -2.494 0.981 31
4ZX N58 N -6.346 2.116 32
4ZX C60 C -6.415 3.527 33
4ZX C63 C -7.764 4.197 34
4ZX C64 C -7.782 5.696 35
4ZX C66 C -9.092 6.425 36
4ZX C68 C -10.383 5.659 37
4ZX C70 C -10.360 4.160 38
4ZX C72 C -9.052 3.425 39
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
4ZX C50 N58 SINGLE NONE 1
4ZX C50 C47 SINGLE NONE 2
4ZX C50 C52 SINGLE NONE 3
4ZX C44 C47 SINGLE NONE 4
4ZX C44 N43 SINGLE NONE 5
4ZX O18 C17 DOUBLE NONE 6
4ZX N58 C60 SINGLE NONE 7
4ZX C70 C68 DOUBLE NONE 8
4ZX C70 C72 SINGLE NONE 9
4ZX C68 C66 SINGLE NONE 10
4ZX C55 C52 SINGLE NONE 11
4ZX C55 N43 SINGLE NONE 12
4ZX C23 C21 SINGLE NONE 13
4ZX C23 C26 SINGLE NONE 14
4ZX C72 C63 DOUBLE NONE 15
4ZX N43 S40 SINGLE NONE 16
4ZX C66 C64 DOUBLE NONE 17
4ZX C63 C64 SINGLE NONE 18
4ZX C63 C60 SINGLE NONE 19
4ZX C14 C06 DOUBLE NONE 20
4ZX C14 C16 SINGLE NONE 21
4ZX C07 C06 SINGLE NONE 22
4ZX C07 C10 SINGLE NONE 23
4ZX C17 C16 SINGLE NONE 24
4ZX C17 N19 SINGLE NONE 25
4ZX C21 N19 SINGLE BEGINDASH 26
4ZX C21 C36 SINGLE NONE 27
4ZX C26 N39 SINGLE NONE 28
4ZX C26 C28 SINGLE NONE 29
4ZX C06 C05 SINGLE NONE 30
4ZX C16 C02 DOUBLE NONE 31
4ZX N39 S40 SINGLE NONE 32
4ZX N39 C34 SINGLE NONE 33
4ZX C10 O11 DOUBLE NONE 34
4ZX C10 N12 SINGLE NONE 35
4ZX S40 O41 DOUBLE NONE 36
4ZX S40 O42 DOUBLE NONE 37
4ZX C36 C34 SINGLE NONE 38
4ZX C28 C31 SINGLE NONE 39
4ZX C05 N12 SINGLE NONE 40
4ZX C05 C03 DOUBLE NONE 41
4ZX C02 C03 SINGLE NONE 42
4ZX C02 CL1 SINGLE NONE 43
4ZX C34 C31 SINGLE NONE 44
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
4ZX MurckoScaffold S1 scaffold 'O=C1Cc2cc(C(=O)N[C@H]3C[C@H]4CC[C@@H](C3)N4S(=O)(=O)N3CCC(NCc4ccccc4)CC3)ccc2N1' InChI=1S/C28H35N5O4S/c34-27-15-21-14-20(6-9-26(21)31-27)28(35)30-23-16-24-7-8-25(17-23)33(24)38(36,37)32-12-10-22(11-13-32)29-18-19-4-2-1-3-5-19/h1-6,9,14,22-25,29H,7-8,10-13,15-18H2,(H,30,35)(H,31,34)/t23-,24+,25- NGLURTUNOTUWMZ-QEIWAGNOSA-N
4ZX amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
4ZX phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
4ZX Z237754566 F3 fragment CCNS(=O)(=O)N(CC)CC InChI=1S/C6H16N2O2S/c1-4-7-11(9,10)8(5-2)6-3/h7H,4-6H2,1-3H3 FEGBCVVJGMDIML-UHFFFAOYSA-N
4ZX Z278081414 F4 fragment CC(=O)NC1CCNCC1.Cl 'InChI=1S/C7H14N2O.ClH/c1-6(10)9-7-2-4-8-5-3-7;/h7-8H,2-5H2,1H3,(H,9,10);1H' PWMUODAZHNQADN-UHFFFAOYSA-N
4ZX Z2434225559 F5 fragment Cl.NC(=O)c1ccc2c(c1)CCN2 'InChI=1S/C9H10N2O.ClH/c10-9(12)7-1-2-8-6(5-7)3-4-11-8;/h1-2,5,11H,3-4H2,(H2,10,12);1H' BYBPMNCMIPWXRE-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
4ZX C02 S1 1
4ZX C03 S1 1
4ZX C05 S1 1
4ZX C06 S1 1
4ZX C07 S1 1
4ZX C10 S1 1
4ZX O11 S1 1
4ZX N12 S1 1
4ZX C14 S1 1
4ZX C16 S1 1
4ZX C17 S1 1
4ZX O18 S1 1
4ZX N19 S1 1
4ZX C21 S1 1
4ZX C23 S1 1
4ZX C26 S1 1
4ZX C28 S1 1
4ZX C31 S1 1
4ZX C34 S1 1
4ZX C36 S1 1
4ZX N39 S1 1
4ZX S40 S1 1
4ZX O41 S1 1
4ZX O42 S1 1
4ZX N43 S1 1
4ZX C44 S1 1
4ZX C47 S1 1
4ZX C50 S1 1
4ZX C52 S1 1
4ZX C55 S1 1
4ZX N58 S1 1
4ZX C60 S1 1
4ZX C63 S1 1
4ZX C64 S1 1
4ZX C66 S1 1
4ZX C68 S1 1
4ZX C70 S1 1
4ZX C72 S1 1
4ZX N12 F1 1
4ZX C10 F1 1
4ZX O11 F1 1
4ZX C07 F1 1
4ZX N19 F1 2
4ZX C17 F1 2
4ZX O18 F1 2
4ZX C16 F1 2
4ZX C02 F2 1
4ZX C16 F2 1
4ZX C14 F2 1
4ZX C06 F2 1
4ZX C05 F2 1
4ZX C03 F2 1
4ZX C63 F2 2
4ZX C72 F2 2
4ZX C70 F2 2
4ZX C68 F2 2
4ZX C66 F2 2
4ZX C64 F2 2
4ZX C23 F3 1
4ZX C26 F3 1
4ZX N39 F3 1
4ZX S40 F3 1
4ZX O41 F3 1
4ZX O42 F3 1
4ZX N43 F3 1
4ZX C44 F3 1
4ZX C47 F3 1
4ZX C55 F3 1
4ZX C52 F3 1
4ZX C28 F3 2
4ZX C26 F3 2
4ZX N39 F3 2
4ZX S40 F3 2
4ZX O41 F3 2
4ZX O42 F3 2
4ZX N43 F3 2
4ZX C44 F3 2
4ZX C47 F3 2
4ZX C55 F3 2
4ZX C52 F3 2
4ZX C31 F3 3
4ZX C34 F3 3
4ZX N39 F3 3
4ZX S40 F3 3
4ZX O41 F3 3
4ZX O42 F3 3
4ZX N43 F3 3
4ZX C44 F3 3
4ZX C47 F3 3
4ZX C55 F3 3
4ZX C52 F3 3
4ZX C36 F3 4
4ZX C34 F3 4
4ZX N39 F3 4
4ZX S40 F3 4
4ZX O41 F3 4
4ZX O42 F3 4
4ZX N43 F3 4
4ZX C44 F3 4
4ZX C47 F3 4
4ZX C55 F3 4
4ZX C52 F3 4
4ZX C47 F3 5
4ZX C44 F3 5
4ZX N43 F3 5
4ZX S40 F3 5
4ZX O41 F3 5
4ZX O42 F3 5
4ZX N39 F3 5
4ZX C26 F3 5
4ZX C23 F3 5
4ZX C34 F3 5
4ZX C36 F3 5
4ZX C47 F3 6
4ZX C44 F3 6
4ZX N43 F3 6
4ZX S40 F3 6
4ZX O41 F3 6
4ZX O42 F3 6
4ZX N39 F3 6
4ZX C26 F3 6
4ZX C23 F3 6
4ZX C34 F3 6
4ZX C31 F3 6
4ZX C47 F3 7
4ZX C44 F3 7
4ZX N43 F3 7
4ZX S40 F3 7
4ZX O41 F3 7
4ZX O42 F3 7
4ZX N39 F3 7
4ZX C26 F3 7
4ZX C28 F3 7
4ZX C34 F3 7
4ZX C36 F3 7
4ZX C47 F3 8
4ZX C44 F3 8
4ZX N43 F3 8
4ZX S40 F3 8
4ZX O41 F3 8
4ZX O42 F3 8
4ZX N39 F3 8
4ZX C26 F3 8
4ZX C28 F3 8
4ZX C34 F3 8
4ZX C31 F3 8
4ZX C52 F3 9
4ZX C55 F3 9
4ZX N43 F3 9
4ZX S40 F3 9
4ZX O41 F3 9
4ZX O42 F3 9
4ZX N39 F3 9
4ZX C26 F3 9
4ZX C23 F3 9
4ZX C34 F3 9
4ZX C36 F3 9
4ZX C52 F3 10
4ZX C55 F3 10
4ZX N43 F3 10
4ZX S40 F3 10
4ZX O41 F3 10
4ZX O42 F3 10
4ZX N39 F3 10
4ZX C26 F3 10
4ZX C23 F3 10
4ZX C34 F3 10
4ZX C31 F3 10
4ZX C52 F3 11
4ZX C55 F3 11
4ZX N43 F3 11
4ZX S40 F3 11
4ZX O41 F3 11
4ZX O42 F3 11
4ZX N39 F3 11
4ZX C26 F3 11
4ZX C28 F3 11
4ZX C34 F3 11
4ZX C36 F3 11
4ZX C52 F3 12
4ZX C55 F3 12
4ZX N43 F3 12
4ZX S40 F3 12
4ZX O41 F3 12
4ZX O42 F3 12
4ZX N39 F3 12
4ZX C26 F3 12
4ZX C28 F3 12
4ZX C34 F3 12
4ZX C31 F3 12
4ZX CL1 F4 1
4ZX C16 F4 1
4ZX C17 F4 1
4ZX O18 F4 1
4ZX N19 F4 1
4ZX C21 F4 1
4ZX C23 F4 1
4ZX C26 F4 1
4ZX N39 F4 1
4ZX C34 F4 1
4ZX C36 F4 1
4ZX CL1 F5 1
4ZX N19 F5 1
4ZX C17 F5 1
4ZX O18 F5 1
4ZX C16 F5 1
4ZX C02 F5 1
4ZX C03 F5 1
4ZX C05 F5 1
4ZX N12 F5 1
4ZX C10 F5 1
4ZX C07 F5 1
4ZX C06 F5 1
4ZX C14 F5 1
#
_pdbe_chem_comp_rdkit_properties.comp_id 4ZX
_pdbe_chem_comp_rdkit_properties.exactmw 571.202
_pdbe_chem_comp_rdkit_properties.amw 572.131
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 9
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 3
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 7
_pdbe_chem_comp_rdkit_properties.NumHBD 3
_pdbe_chem_comp_rdkit_properties.NumHBA 5
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 39
_pdbe_chem_comp_rdkit_properties.NumAtoms 73
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 11
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 2
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.500
_pdbe_chem_comp_rdkit_properties.NumRings 6
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 4
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 3
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 4
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 4
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 2
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 3
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 281.939
_pdbe_chem_comp_rdkit_properties.tpsa 110.850
_pdbe_chem_comp_rdkit_properties.CrippenClogP 2.514
_pdbe_chem_comp_rdkit_properties.CrippenMR 148.097
_pdbe_chem_comp_rdkit_properties.chi0v 20.228
_pdbe_chem_comp_rdkit_properties.chi1v 12.057
_pdbe_chem_comp_rdkit_properties.chi2v 6.533
_pdbe_chem_comp_rdkit_properties.chi3v 6.533
_pdbe_chem_comp_rdkit_properties.chi4v 4.506
_pdbe_chem_comp_rdkit_properties.chi0n 52.655
_pdbe_chem_comp_rdkit_properties.chi1n 27.123
_pdbe_chem_comp_rdkit_properties.chi2n 4.779
_pdbe_chem_comp_rdkit_properties.chi3n 4.779
_pdbe_chem_comp_rdkit_properties.chi4n 3.159
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.500
_pdbe_chem_comp_rdkit_properties.kappa1 8.070
_pdbe_chem_comp_rdkit_properties.kappa2 10.817
_pdbe_chem_comp_rdkit_properties.kappa3 5.450
_pdbe_chem_comp_rdkit_properties.Phi 2.238
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
4ZX UniChem ZINC ZINC000263621057
4ZX UniChem SureChEMBL SCHEMBL17591904
4ZX UniChem BindingDb 378459
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
4ZX CL1 -6.917 0.915 -2.041 ETKDGv3 1
4ZX C02 -7.183 -0.153 -0.665 ETKDGv3 2
4ZX C03 -8.540 -0.156 -0.055 ETKDGv3 3
4ZX C05 -8.787 -1.018 0.931 ETKDGv3 4
4ZX C06 -7.783 -1.940 1.413 ETKDGv3 5
4ZX C07 -8.355 -2.780 2.507 ETKDGv3 6
4ZX C10 -9.754 -2.227 2.570 ETKDGv3 7
4ZX O11 -10.633 -2.641 3.372 ETKDGv3 8
4ZX N12 -10.004 -1.182 1.632 ETKDGv3 9
4ZX C14 -6.555 -1.965 0.892 ETKDGv3 10
4ZX C16 -6.224 -1.007 -0.205 ETKDGv3 11
4ZX C17 -4.860 -1.040 -0.767 ETKDGv3 12
4ZX O18 -4.337 -2.153 -1.045 ETKDGv3 13
4ZX N19 -4.109 0.172 -0.945 ETKDGv3 14
4ZX C21 -2.796 0.191 -1.603 ETKDGv3 15
4ZX C23 -1.705 -0.377 -0.647 ETKDGv3 16
4ZX C26 -0.866 0.718 0.057 ETKDGv3 17
4ZX C28 -1.769 1.563 0.970 ETKDGv3 18
4ZX C31 -2.193 2.747 0.089 ETKDGv3 19
4ZX C34 -1.541 2.457 -1.265 ETKDGv3 20
4ZX C36 -2.479 1.611 -2.167 ETKDGv3 21
4ZX N39 -0.350 1.702 -0.894 ETKDGv3 22
4ZX S40 0.678 1.170 -2.217 ETKDGv3 23
4ZX O41 0.870 2.328 -3.156 ETKDGv3 24
4ZX O42 0.068 0.040 -2.997 ETKDGv3 25
4ZX N43 2.256 0.700 -1.631 ETKDGv3 26
4ZX C44 2.275 -0.722 -1.232 ETKDGv3 27
4ZX C47 3.489 -1.073 -0.344 ETKDGv3 28
4ZX C50 4.648 -0.078 -0.547 ETKDGv3 29
4ZX C52 4.171 1.362 -0.226 ETKDGv3 30
4ZX C55 2.680 1.581 -0.534 ETKDGv3 31
4ZX N58 5.790 -0.449 0.312 ETKDGv3 32
4ZX C60 7.028 0.215 -0.118 ETKDGv3 33
4ZX C63 8.142 -0.127 0.833 ETKDGv3 34
4ZX C64 9.056 -1.256 0.529 ETKDGv3 35
4ZX C66 10.025 -1.590 1.391 ETKDGv3 36
4ZX C68 10.184 -0.839 2.653 ETKDGv3 37
4ZX C70 9.355 0.172 2.939 ETKDGv3 38
4ZX C72 8.281 0.541 1.993 ETKDGv3 39
4ZX H1 -9.311 0.518 -0.406 ETKDGv3 40
4ZX H2 -7.817 -2.609 3.464 ETKDGv3 41
4ZX H3 -8.365 -3.854 2.222 ETKDGv3 42
4ZX H4 -10.895 -0.655 1.492 ETKDGv3 43
4ZX H5 -5.815 -2.661 1.267 ETKDGv3 44
4ZX H6 -4.524 1.061 -0.590 ETKDGv3 45
4ZX H7 -2.858 -0.488 -2.484 ETKDGv3 46
4ZX H8 -1.035 -1.064 -1.199 ETKDGv3 47
4ZX H9 -2.169 -1.022 0.131 ETKDGv3 48
4ZX H10 -0.045 0.263 0.649 ETKDGv3 49
4ZX H11 -1.183 1.933 1.840 ETKDGv3 50
4ZX H12 -2.650 1.001 1.351 ETKDGv3 51
4ZX H13 -3.295 2.860 0.028 ETKDGv3 52
4ZX H14 -1.773 3.689 0.507 ETKDGv3 53
4ZX H15 -1.263 3.405 -1.775 ETKDGv3 54
4ZX H16 -3.419 2.175 -2.353 ETKDGv3 55
4ZX H17 -2.008 1.509 -3.168 ETKDGv3 56
4ZX H18 2.322 -1.340 -2.154 ETKDGv3 57
4ZX H19 1.349 -1.005 -0.690 ETKDGv3 58
4ZX H20 3.180 -1.055 0.725 ETKDGv3 59
4ZX H21 3.823 -2.107 -0.579 ETKDGv3 60
4ZX H22 4.945 -0.133 -1.621 ETKDGv3 61
4ZX H23 4.769 2.079 -0.830 ETKDGv3 62
4ZX H24 4.349 1.595 0.847 ETKDGv3 63
4ZX H25 2.080 1.378 0.382 ETKDGv3 64
4ZX H26 2.527 2.648 -0.811 ETKDGv3 65
4ZX H27 5.953 -1.480 0.220 ETKDGv3 66
4ZX H29 7.302 -0.106 -1.148 ETKDGv3 67
4ZX H30 6.897 1.319 -0.134 ETKDGv3 68
4ZX H31 8.943 -1.815 -0.391 ETKDGv3 69
4ZX H32 10.692 -2.412 1.167 ETKDGv3 70
4ZX H33 10.969 -1.110 3.346 ETKDGv3 71
4ZX H34 9.466 0.721 3.866 ETKDGv3 72
4ZX H35 7.609 1.351 2.248 ETKDGv3 73
#