data_43F
#
_chem_comp.id 43F
_chem_comp.name 2,4-DICHLORO-1-[4-(CHLOROMETHYL)-2-METHOXYPHENOXY]BENZENE
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C14 H11 Cl3 O2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2011-12-12
_chem_comp.pdbx_modified_date 2014-09-05
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 317.595
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 43F
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 4AC2
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site EBI
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
43F C1 C1 C 0 1 Y N N N N N -0.182 -0.537 24.759 0.907 -0.608 -0.419 C1 43F 1
43F C2 C2 C 0 1 Y N N N N N -0.869 -0.276 23.580 1.481 -0.211 0.785 C2 43F 2
43F C3 C3 C 0 1 Y N N N N N -0.178 -0.238 22.398 2.712 0.424 0.785 C3 43F 3
43F C4 C4 C 0 1 Y N N N N N 1.197 -0.457 22.430 3.367 0.663 -0.409 C4 43F 4
43F C5 C5 C 0 1 Y N N N N N 1.894 -0.716 23.604 2.797 0.269 -1.604 C5 43F 5
43F C6 C6 C 0 1 Y N N N N N 1.189 -0.762 24.786 1.569 -0.366 -1.612 C6 43F 6
43F O7 O7 O 0 1 N N N N N N -0.871 -0.573 25.918 -0.299 -1.237 -0.424 O7 43F 7
43F C8 C8 C 0 1 Y N N N N N -0.275 0.177 26.890 -1.418 -0.471 -0.329 C8 43F 8
43F C9 C9 C 0 1 Y N N N N N -0.521 -0.161 28.210 -2.664 -1.073 -0.207 C9 43F 9
43F C10 C10 C 0 1 Y N N N N N 0.050 0.548 29.245 -3.800 -0.293 -0.110 C10 43F 10
43F C11 C11 C 0 1 Y N N N N N 0.874 1.618 28.972 -3.697 1.087 -0.135 C11 43F 11
43F C12 C12 C 0 1 Y N N N N N 1.142 1.973 27.652 -2.457 1.688 -0.257 C12 43F 12
43F C13 C13 C 0 1 Y N N N N N 0.563 1.253 26.606 -1.317 0.912 -0.347 C13 43F 13
43F C14 C14 C 0 1 N N N N N N 1.966 -0.409 21.149 4.706 1.355 -0.407 C14 43F 14
43F CL1 CL1 CL 0 0 N N N N N N 3.125 0.914 21.288 6.018 0.125 -0.280 CL1 43F 15
43F CL2 CL2 CL 0 0 N N N N N N 1.543 2.458 30.326 -5.126 2.065 -0.014 CL2 43F 16
43F CL3 CL3 CL 0 0 N N N N N N -1.543 -1.489 28.598 -2.793 -2.804 -0.176 CL3 43F 17
43F O18 O18 O 0 1 N N N N N N -2.215 -0.057 23.582 0.835 -0.445 1.959 O18 43F 18
43F CAA CAA C 0 1 N N N N N N -2.725 -0.097 22.246 1.485 -0.010 3.155 CAA 43F 19
43F H6 H6 H 0 1 N N N N N N 1.693 -0.969 25.718 1.125 -0.673 -2.547 H6 43F 20
43F H3 H3 H 0 1 N N N N N N -0.686 -0.043 21.465 3.160 0.734 1.718 H3 43F 21
43F H5 H5 H 0 1 N N N N N N 2.962 -0.877 23.590 3.312 0.457 -2.535 H5 43F 22
43F H141 H141 H 0 0 N N N N N N 2.496 -1.360 20.991 4.825 1.919 -1.332 H141 43F 23
43F H142 H142 H 0 0 N N N N N N 1.284 -0.226 20.306 4.762 2.035 0.444 H142 43F 24
43F H13 H13 H 0 1 N N N N N N 0.764 1.529 25.581 -0.349 1.382 -0.437 H13 43F 25
43F H10 H10 H 0 1 N N N N N N -0.148 0.265 30.268 -4.769 -0.760 -0.015 H10 43F 26
43F H12 H12 H 0 1 N N N N N N 1.797 2.805 27.438 -2.379 2.765 -0.276 H12 43F 27
43F HAA1 HAA1 H 0 0 N N N N N N -3.810 0.081 22.262 0.864 -0.258 4.016 HAA1 43F 28
43F HAA2 HAA2 H 0 0 N N N N N N -2.235 0.682 21.643 2.449 -0.509 3.247 HAA2 43F 29
43F HAA3 HAA3 H 0 0 N N N N N N -2.522 -1.084 21.805 1.636 1.069 3.115 HAA3 43F 30
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
43F C1 C2 SING Y N 1
43F C1 C6 DOUB Y N 2
43F C1 O7 SING N N 3
43F C2 C3 DOUB Y N 4
43F C2 O18 SING N N 5
43F C3 C4 SING Y N 6
43F C4 C5 DOUB Y N 7
43F C4 C14 SING N N 8
43F C5 C6 SING Y N 9
43F O7 C8 SING N N 10
43F C8 C9 SING Y N 11
43F C8 C13 DOUB Y N 12
43F C9 C10 DOUB Y N 13
43F C9 CL3 SING N N 14
43F C10 C11 SING Y N 15
43F C11 C12 DOUB Y N 16
43F C11 CL2 SING N N 17
43F C12 C13 SING Y N 18
43F C14 CL1 SING N N 19
43F O18 CAA SING N N 20
43F C6 H6 SING N N 21
43F C3 H3 SING N N 22
43F C5 H5 SING N N 23
43F C14 H141 SING N N 24
43F C14 H142 SING N N 25
43F C13 H13 SING N N 26
43F C10 H10 SING N N 27
43F C12 H12 SING N N 28
43F CAA HAA1 SING N N 29
43F CAA HAA2 SING N N 30
43F CAA HAA3 SING N N 31
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
43F SMILES ACDLabs 12.01 Clc2cc(Cl)ccc2Oc1ccc(cc1OC)CCl
43F InChI InChI 1.03 InChI=1S/C14H11Cl3O2/c1-18-14-6-9(8-15)2-4-13(14)19-12-5-3-10(16)7-11(12)17/h2-7H,8H2,1H3
43F InChIKey InChI 1.03 KGFZDWAEBKKPMK-UHFFFAOYSA-N
43F SMILES_CANONICAL CACTVS 3.385 COc1cc(CCl)ccc1Oc2ccc(Cl)cc2Cl
43F SMILES CACTVS 3.385 COc1cc(CCl)ccc1Oc2ccc(Cl)cc2Cl
43F SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 COc1cc(ccc1Oc2ccc(cc2Cl)Cl)CCl
43F SMILES "OpenEye OEToolkits" 1.9.2 COc1cc(ccc1Oc2ccc(cc2Cl)Cl)CCl
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
43F "SYSTEMATIC NAME" ACDLabs 12.01 "2,4-dichloro-1-[4-(chloromethyl)-2-methoxyphenoxy]benzene (non-preferred name)"
43F "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 2,4-bis(chloranyl)-1-[4-(chloromethyl)-2-methoxy-phenoxy]benzene
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
43F 'Create component' 2011-12-12 EBI
43F 'Initial release' 2012-09-21 RCSB
43F 'Modify descriptor' 2014-09-05 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
43F C1 C 6.897 0.375 1
43F C2 C 5.598 -0.375 2
43F C3 C 5.598 -1.875 3
43F C4 C 6.897 -2.625 4
43F C5 C 8.196 -1.875 5
43F C6 C 8.196 -0.375 6
43F O7 O 6.897 1.875 7
43F C8 C 8.196 2.625 8
43F C9 C 9.495 1.875 9
43F C10 C 10.794 2.625 10
43F C11 C 10.794 4.125 11
43F C12 C 9.495 4.875 12
43F C13 C 8.196 4.125 13
43F C14 C 6.897 -4.125 14
43F CL1 Cl 8.196 -4.875 15
43F CL2 Cl 12.093 4.875 16
43F CL3 Cl 9.495 0.375 17
43F O18 O 4.299 0.375 18
43F CAA C 3.000 -0.375 19
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
43F C1 C2 DOUBLE NONE 1
43F C1 C6 SINGLE NONE 2
43F C1 O7 SINGLE NONE 3
43F C2 C3 SINGLE NONE 4
43F C2 O18 SINGLE NONE 5
43F C3 C4 DOUBLE NONE 6
43F C4 C5 SINGLE NONE 7
43F C4 C14 SINGLE NONE 8
43F C5 C6 DOUBLE NONE 9
43F O7 C8 SINGLE NONE 10
43F C8 C9 DOUBLE NONE 11
43F C8 C13 SINGLE NONE 12
43F C9 C10 SINGLE NONE 13
43F C9 CL3 SINGLE NONE 14
43F C10 C11 DOUBLE NONE 15
43F C11 C12 SINGLE NONE 16
43F C11 CL2 SINGLE NONE 17
43F C12 C13 DOUBLE NONE 18
43F C14 CL1 SINGLE NONE 19
43F O18 CAA SINGLE NONE 20
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
43F MurckoScaffold S1 scaffold c1ccc(Oc2ccccc2)cc1 InChI=1S/C12H10O/c1-3-7-11(8-4-1)13-12-9-5-2-6-10-12/h1-10H USIUVYZYUHIAEV-UHFFFAOYSA-N
43F phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
43F C1 S1 1
43F C2 S1 1
43F C3 S1 1
43F C4 S1 1
43F C5 S1 1
43F C6 S1 1
43F O7 S1 1
43F C8 S1 1
43F C9 S1 1
43F C10 S1 1
43F C11 S1 1
43F C12 S1 1
43F C13 S1 1
43F C1 F1 1
43F C2 F1 1
43F C3 F1 1
43F C4 F1 1
43F C5 F1 1
43F C6 F1 1
43F C8 F1 2
43F C9 F1 2
43F C10 F1 2
43F C11 F1 2
43F C12 F1 2
43F C13 F1 2
#
_pdbe_chem_comp_rdkit_properties.comp_id 43F
_pdbe_chem_comp_rdkit_properties.exactmw 315.982
_pdbe_chem_comp_rdkit_properties.amw 317.599
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 2
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 0
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 5
_pdbe_chem_comp_rdkit_properties.NumHBD 0
_pdbe_chem_comp_rdkit_properties.NumHBA 2
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 19
_pdbe_chem_comp_rdkit_properties.NumAtoms 30
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 5
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.143
_pdbe_chem_comp_rdkit_properties.NumRings 2
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 141.810
_pdbe_chem_comp_rdkit_properties.tpsa 18.460
_pdbe_chem_comp_rdkit_properties.CrippenClogP 4.091
_pdbe_chem_comp_rdkit_properties.CrippenMR 76.991
_pdbe_chem_comp_rdkit_properties.chi0v 11.218
_pdbe_chem_comp_rdkit_properties.chi1v 5.767
_pdbe_chem_comp_rdkit_properties.chi2v 2.495
_pdbe_chem_comp_rdkit_properties.chi3v 2.495
_pdbe_chem_comp_rdkit_properties.chi4v 1.557
_pdbe_chem_comp_rdkit_properties.chi0n 19.950
_pdbe_chem_comp_rdkit_properties.chi1n 10.133
_pdbe_chem_comp_rdkit_properties.chi2n 1.851
_pdbe_chem_comp_rdkit_properties.chi3n 1.851
_pdbe_chem_comp_rdkit_properties.chi4n 1.092
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.090
_pdbe_chem_comp_rdkit_properties.kappa1 5.725
_pdbe_chem_comp_rdkit_properties.kappa2 6.376
_pdbe_chem_comp_rdkit_properties.kappa3 3.471
_pdbe_chem_comp_rdkit_properties.Phi 1.921
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
43F UniChem ZINC ZINC000028869363
43F UniChem SureChEMBL SCHEMBL13236279
43F UniChem 'PubChem TPHARMA' 46528903
43F UniChem BindingDb 50225227
43F UniChem 'Probes And Drugs' PD144537
43F UniChem PubChem 23656592
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
43F C1 0.515 -0.864 -0.798 ETKDGv3 1
43F C2 0.871 0.378 -0.405 ETKDGv3 2
43F C3 2.251 0.612 0.105 ETKDGv3 3
43F C4 3.150 -0.386 0.127 ETKDGv3 4
43F C5 2.751 -1.736 -0.332 ETKDGv3 5
43F C6 1.510 -1.957 -0.775 ETKDGv3 6
43F O7 -0.771 -1.149 -1.275 ETKDGv3 7
43F C8 -1.965 -0.779 -0.636 ETKDGv3 8
43F C9 -3.105 -0.724 -1.346 ETKDGv3 9
43F C10 -4.373 -0.338 -0.690 ETKDGv3 10
43F C11 -4.396 -0.054 0.618 ETKDGv3 11
43F C12 -3.153 -0.134 1.411 ETKDGv3 12
43F C13 -2.003 -0.482 0.822 ETKDGv3 13
43F C14 4.531 -0.162 0.672 ETKDGv3 14
43F CL1 4.533 -0.427 2.433 ETKDGv3 15
43F CL2 -5.899 0.406 1.397 ETKDGv3 16
43F CL3 -3.113 -1.085 -3.066 ETKDGv3 17
43F O18 -0.061 1.422 -0.505 ETKDGv3 18
43F CAA 0.192 2.762 -0.098 ETKDGv3 19
43F H6 1.225 -2.947 -1.109 ETKDGv3 20
43F H3 2.537 1.594 0.460 ETKDGv3 21
43F H5 3.465 -2.550 -0.310 ETKDGv3 22
43F H141 4.876 0.872 0.459 ETKDGv3 23
43F H142 5.250 -0.865 0.201 ETKDGv3 24
43F H13 -1.104 -0.556 1.420 ETKDGv3 25
43F H10 -5.283 -0.284 -1.275 ETKDGv3 26
43F H12 -3.174 0.080 2.472 ETKDGv3 27
43F HAA1 -0.716 3.372 -0.281 ETKDGv3 28
43F HAA2 0.428 2.792 0.987 ETKDGv3 29
43F HAA3 1.032 3.187 -0.686 ETKDGv3 30
#