data_316
#
_chem_comp.id 316
_chem_comp.name
"N'-[(1S,2S)-2-[(2S)-4-benzyl-3-oxopiperazin-2-yl]-1-(3,5-difluorobenzyl)-2-hydroxyethyl]-5-methyl-N,N-dipropylbenzene-1,3-dicarboxamide"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C35 H42 F2 N4 O4"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2008-04-08
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 620.729
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 316
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 3CIC
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
316 C1 C1 C 0 1 Y N N N N N 27.046 15.556 24.308 -4.210 1.844 -1.312 C1 316 1
316 C2 C2 C 0 1 Y N N N N N 27.180 14.339 23.583 -4.350 0.856 -0.335 C2 316 2
316 C3 C3 C 0 1 Y N N N N N 26.017 13.565 23.274 -3.249 0.087 0.036 C3 316 3
316 C4 C4 C 0 1 Y N N N N N 24.730 14.016 23.684 -2.015 0.310 -0.570 C4 316 4
316 C5 C5 C 0 1 Y N N N N N 24.601 15.242 24.403 -1.889 1.301 -1.546 C5 316 5
316 C6 C6 C 0 1 Y N N N N N 25.763 16.010 24.716 -2.984 2.060 -1.910 C6 316 6
316 C7 C7 C 0 1 N N N N N N 28.515 13.871 23.184 -5.663 0.627 0.305 C7 316 7
316 N1 N1 N 0 1 N N N N N N 28.756 13.649 21.854 -6.384 1.673 0.757 N1 316 8
316 O1 O1 O 0 1 N N N N N N 29.393 13.674 24.020 -6.093 -0.504 0.423 O1 316 9
316 C8 C8 C 0 1 N N N N N N 30.087 13.176 21.497 -7.628 1.440 1.495 C8 316 10
316 C9 C9 C 0 1 N N N N N N 27.774 13.865 20.789 -5.923 3.041 0.511 C9 316 11
316 C10 C10 C 0 1 N N N N N N 28.322 14.873 19.784 -6.679 3.626 -0.684 C10 316 12
316 C11 C11 C 0 1 N N N N N N 28.895 16.117 20.472 -6.096 4.997 -1.035 C11 316 13
316 C12 C12 C 0 1 N N N N N N 30.043 11.703 21.034 -7.307 1.193 2.970 C12 316 14
316 C13 C13 C 0 1 N N N N N N 29.220 10.797 21.956 -8.606 0.951 3.741 C13 316 15
316 C14 C14 C 0 1 N N N N N N 25.636 17.273 25.462 -2.840 3.128 -2.963 C14 316 16
316 C15 C15 C 0 1 N N N N N N 23.537 13.236 23.349 -0.841 -0.502 -0.182 C15 316 17
316 O2 O2 O 0 1 N N N N N N 22.467 13.761 23.078 -0.953 -1.364 0.667 O2 316 18
316 N2 N2 N 0 1 N N N N N N 23.707 11.888 23.354 0.352 -0.285 -0.771 N2 316 19
316 C16 C16 C 0 1 N N S N N N 22.568 11.022 23.004 1.515 -1.089 -0.386 C16 316 20
316 C17 C17 C 0 1 N N S N N N 22.043 10.176 24.204 2.796 -0.305 -0.678 C17 316 21
316 O3 O3 O 0 1 N N N N N N 21.035 9.269 23.736 2.922 -0.106 -2.087 O3 316 22
316 C18 C18 C 0 1 N N N N N N 22.974 10.080 21.866 1.521 -2.392 -1.187 C18 316 23
316 C19 C19 C 0 1 Y N N N N N 23.668 10.825 20.747 0.321 -3.221 -0.808 C19 316 24
316 C20 C20 C 0 1 Y N N N N N 22.977 11.845 20.028 -0.867 -3.072 -1.499 C20 316 25
316 C21 C21 C 0 1 Y N N N N N 23.638 12.539 18.974 -1.970 -3.833 -1.152 C21 316 26
316 C22 C22 C 0 1 Y N N N N N 24.980 12.218 18.635 -1.884 -4.743 -0.112 C22 316 27
316 C23 C23 C 0 1 Y N N N N N 25.669 11.205 19.347 -0.694 -4.891 0.579 C23 316 28
316 C24 C24 C 0 1 Y N N N N N 25.018 10.504 20.406 0.410 -4.133 0.226 C24 316 29
316 F1 F1 F 0 1 N N N N N N 23.006 13.493 18.295 -3.132 -3.687 -1.827 F1 316 30
316 F2 F2 F 0 1 N N N N N N 26.927 10.915 19.019 -0.608 -5.778 1.594 F2 316 31
316 C25 C25 C 0 1 N N S N N N 21.445 10.997 25.354 4.003 -1.090 -0.162 C25 316 32
316 C26 C26 C 0 1 N N N N N N 20.143 11.717 24.936 5.260 -0.319 -0.449 C26 316 33
316 N4 N4 N 0 1 N N N N N N 19.101 11.642 25.812 6.253 -0.198 0.438 N4 316 34
316 C28 C28 C 0 1 N N N N N N 19.091 10.939 27.104 6.194 -0.773 1.778 C28 316 35
316 C29 C29 C 0 1 N N N N N N 20.461 10.580 27.599 5.113 -1.853 1.838 C29 316 36
316 N3 N3 N 0 1 N N N N N N 21.278 10.118 26.499 3.865 -1.304 1.285 N3 316 37
316 O4 O4 O 0 1 N N N N N N 20.078 12.317 23.870 5.378 0.217 -1.531 O4 316 38
316 C27 C27 C 0 1 N N N N N N 17.842 12.304 25.463 7.454 0.545 0.047 C27 316 39
316 C31 C31 C 0 1 Y N N N N N 16.786 11.283 25.104 7.283 2.000 0.401 C31 316 40
316 C32 C32 C 0 1 Y N N N N N 16.947 10.467 23.947 7.683 2.460 1.642 C32 316 41
316 C33 C33 C 0 1 Y N N N N N 15.954 9.503 23.612 7.526 3.794 1.967 C33 316 42
316 C34 C34 C 0 1 Y N N N N N 14.800 9.356 24.434 6.970 4.668 1.052 C34 316 43
316 C35 C35 C 0 1 Y N N N N N 14.638 10.173 25.594 6.570 4.208 -0.189 C35 316 44
316 C36 C36 C 0 1 Y N N N N N 15.632 11.137 25.927 6.731 2.874 -0.516 C36 316 45
316 H1 H1 H 0 1 N N N N N N 27.924 16.137 24.549 -5.063 2.438 -1.604 H1 316 46
316 H3 H3 H 0 1 N N N N N N 26.115 12.638 22.729 -3.352 -0.678 0.792 H3 316 47
316 H5 H5 H 0 1 N N N N N N 23.625 15.588 24.710 -0.933 1.475 -2.018 H5 316 48
316 H8 H8 H 0 1 N N N N N N 30.480 13.797 20.678 -8.273 2.314 1.405 H8 316 49
316 H8A H8A H 0 1 N N N N N N 30.735 13.247 22.383 -8.137 0.569 1.083 H8A 316 50
316 H9 H9 H 0 1 N N N N N N 27.573 12.912 20.278 -6.111 3.652 1.393 H9 316 51
316 H9A H9A H 0 1 N N N N N N 26.842 14.254 21.225 -4.855 3.032 0.296 H9A 316 52
316 H10 H10 H 0 1 N N N N N N 29.123 14.391 19.205 -6.577 2.959 -1.540 H10 316 53
316 H10A H10A H 0 0 N N N N N N 27.493 15.193 19.136 -7.733 3.734 -0.430 H10A 316 54
316 H11 H11 H 0 1 N N N N N N 29.032 15.913 21.544 -6.635 5.414 -1.886 H11 316 55
316 H11A H11A H 0 0 N N N N N N 29.865 16.372 20.020 -6.198 5.664 -0.179 H11A 316 56
316 H11B H11B H 0 0 N N N N N N 28.199 16.959 20.345 -5.042 4.890 -1.288 H11B 316 57
316 H12 H12 H 0 1 N N N N N N 29.592 11.672 20.031 -6.662 0.319 3.061 H12 316 58
316 H12A H12A H 0 0 N N N N N N 31.077 11.327 21.045 -6.798 2.065 3.382 H12A 316 59
316 H13 H13 H 0 1 N N N N N N 29.023 9.840 21.450 -8.378 0.775 4.792 H13 316 60
316 H13A H13A H 0 0 N N N N N N 29.781 10.612 22.884 -9.251 1.825 3.651 H13A 316 61
316 H13B H13B H 0 0 N N N N N N 28.265 11.288 22.196 -9.116 0.079 3.330 H13B 316 62
316 H14 H14 H 0 1 N N N N N N 25.604 17.061 26.541 -2.572 4.072 -2.490 H14 316 63
316 H14A H14A H 0 0 N N N N N N 26.499 17.918 25.241 -2.060 2.840 -3.668 H14A 316 64
316 H14B H14B H 0 0 N N N N N N 24.709 17.784 25.162 -3.785 3.243 -3.494 H14B 316 65
316 HN2 HN2 H 0 1 N N N N N N 24.593 11.489 23.592 0.440 0.403 -1.449 HN2 316 66
316 H16 H16 H 0 1 N N N N N N 21.748 11.687 22.695 1.462 -1.317 0.678 H16 316 67
316 H17 H17 H 0 1 N N N N N N 22.924 9.657 24.608 2.751 0.663 -0.177 H17 316 68
316 HO3 HO3 H 0 1 N N N N N N 20.435 9.068 24.445 2.968 -0.927 -2.597 HO3 316 69
316 H18 H18 H 0 1 N N N N N N 23.662 9.319 22.264 1.483 -2.164 -2.253 H18 316 70
316 H18A H18A H 0 0 N N N N N N 22.063 9.617 21.459 2.431 -2.950 -0.967 H18A 316 71
316 H20 H20 H 0 1 N N N N N N 21.956 12.090 20.282 -0.934 -2.362 -2.310 H20 316 72
316 H22 H22 H 0 1 N N N N N N 25.475 12.747 17.834 -2.744 -5.337 0.159 H22 316 73
316 H24 H24 H 0 1 N N N N N N 25.544 9.733 20.948 1.340 -4.251 0.762 H24 316 74
316 H25 H25 H 0 1 N N N N N N 22.130 11.811 25.634 4.048 -2.056 -0.666 H25 316 75
316 H28 H28 H 0 1 N N N N N N 18.619 11.597 27.849 7.160 -1.214 2.025 H28 316 76
316 H28A H28A H 0 0 N N N N N N 18.539 9.998 26.960 5.962 0.012 2.498 H28A 316 77
316 H29 H29 H 0 1 N N N N N N 20.928 11.467 28.052 5.425 -2.716 1.250 H29 316 78
316 H29A H29A H 0 0 N N N N N N 20.377 9.779 28.348 4.952 -2.153 2.874 H29A 316 79
316 HN3 HN3 H 0 1 N N N N N N 20.853 9.280 26.158 3.607 -0.448 1.753 HN3 316 80
316 H27 H27 H 0 1 N N N N N N 17.495 12.894 26.324 8.318 0.141 0.574 H27 316 81
316 H27A H27A H 0 0 N N N N N N 18.013 12.958 24.596 7.607 0.449 -1.028 H27A 316 82
316 H32 H32 H 0 1 N N N N N N 17.822 10.580 23.324 8.118 1.777 2.357 H32 316 83
316 H33 H33 H 0 1 N N N N N N 16.076 8.884 22.735 7.838 4.154 2.937 H33 316 84
316 H34 H34 H 0 1 N N N N N N 14.046 8.625 24.180 6.847 5.710 1.307 H34 316 85
316 H35 H35 H 0 1 N N N N N N 13.763 10.060 26.218 6.135 4.891 -0.904 H35 316 86
316 H36 H36 H 0 1 N N N N N N 15.511 11.757 26.803 6.423 2.516 -1.487 H36 316 87
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
316 C1 C2 DOUB Y N 1
316 C1 C6 SING Y N 2
316 C2 C3 SING Y N 3
316 C2 C7 SING N N 4
316 C3 C4 DOUB Y N 5
316 C4 C5 SING Y N 6
316 C4 C15 SING N N 7
316 C5 C6 DOUB Y N 8
316 C6 C14 SING N N 9
316 C7 N1 SING N N 10
316 C7 O1 DOUB N N 11
316 N1 C8 SING N N 12
316 N1 C9 SING N N 13
316 C8 C12 SING N N 14
316 C9 C10 SING N N 15
316 C10 C11 SING N N 16
316 C12 C13 SING N N 17
316 C15 O2 DOUB N N 18
316 C15 N2 SING N N 19
316 N2 C16 SING N N 20
316 C16 C17 SING N N 21
316 C16 C18 SING N N 22
316 C17 O3 SING N N 23
316 C17 C25 SING N N 24
316 C18 C19 SING N N 25
316 C19 C20 DOUB Y N 26
316 C19 C24 SING Y N 27
316 C20 C21 SING Y N 28
316 C21 C22 DOUB Y N 29
316 C21 F1 SING N N 30
316 C22 C23 SING Y N 31
316 C23 C24 DOUB Y N 32
316 C23 F2 SING N N 33
316 C25 C26 SING N N 34
316 C25 N3 SING N N 35
316 C26 N4 SING N N 36
316 C26 O4 DOUB N N 37
316 N4 C28 SING N N 38
316 N4 C27 SING N N 39
316 C28 C29 SING N N 40
316 C29 N3 SING N N 41
316 C27 C31 SING N N 42
316 C31 C32 DOUB Y N 43
316 C31 C36 SING Y N 44
316 C32 C33 SING Y N 45
316 C33 C34 DOUB Y N 46
316 C34 C35 SING Y N 47
316 C35 C36 DOUB Y N 48
316 C1 H1 SING N N 49
316 C3 H3 SING N N 50
316 C5 H5 SING N N 51
316 C8 H8 SING N N 52
316 C8 H8A SING N N 53
316 C9 H9 SING N N 54
316 C9 H9A SING N N 55
316 C10 H10 SING N N 56
316 C10 H10A SING N N 57
316 C11 H11 SING N N 58
316 C11 H11A SING N N 59
316 C11 H11B SING N N 60
316 C12 H12 SING N N 61
316 C12 H12A SING N N 62
316 C13 H13 SING N N 63
316 C13 H13A SING N N 64
316 C13 H13B SING N N 65
316 C14 H14 SING N N 66
316 C14 H14A SING N N 67
316 C14 H14B SING N N 68
316 N2 HN2 SING N N 69
316 C16 H16 SING N N 70
316 C17 H17 SING N N 71
316 O3 HO3 SING N N 72
316 C18 H18 SING N N 73
316 C18 H18A SING N N 74
316 C20 H20 SING N N 75
316 C22 H22 SING N N 76
316 C24 H24 SING N N 77
316 C25 H25 SING N N 78
316 C28 H28 SING N N 79
316 C28 H28A SING N N 80
316 C29 H29 SING N N 81
316 C29 H29A SING N N 82
316 N3 HN3 SING N N 83
316 C27 H27 SING N N 84
316 C27 H27A SING N N 85
316 C32 H32 SING N N 86
316 C33 H33 SING N N 87
316 C34 H34 SING N N 88
316 C35 H35 SING N N 89
316 C36 H36 SING N N 90
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
316 SMILES ACDLabs 10.04 O=C(N(CCC)CCC)c1cc(cc(c1)C)C(=O)NC(Cc2cc(F)cc(F)c2)C(O)C4C(=O)N(Cc3ccccc3)CCN4
316 SMILES_CANONICAL CACTVS 3.341 CCCN(CCC)C(=O)c1cc(C)cc(c1)C(=O)N[C@@H](Cc2cc(F)cc(F)c2)[C@H](O)[C@@H]3NCCN(Cc4ccccc4)C3=O
316 SMILES CACTVS 3.341 CCCN(CCC)C(=O)c1cc(C)cc(c1)C(=O)N[CH](Cc2cc(F)cc(F)c2)[CH](O)[CH]3NCCN(Cc4ccccc4)C3=O
316 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 CCCN(CCC)C(=O)c1cc(cc(c1)C(=O)N[C@@H](Cc2cc(cc(c2)F)F)[C@@H]([C@H]3C(=O)N(CCN3)Cc4ccccc4)O)C
316 SMILES "OpenEye OEToolkits" 1.5.0 CCCN(CCC)C(=O)c1cc(cc(c1)C(=O)NC(Cc2cc(cc(c2)F)F)C(C3C(=O)N(CCN3)Cc4ccccc4)O)C
316 InChI InChI 1.03 InChI=1S/C35H42F2N4O4/c1-4-12-40(13-5-2)34(44)27-16-23(3)15-26(20-27)33(43)39-30(19-25-17-28(36)21-29(37)18-25)32(42)31-35(45)41(14-11-38-31)22-24-9-7-6-8-10-24/h6-10,15-18,20-21,30-32,38,42H,4-5,11-14,19,22H2,1-3H3,(H,39,43)/t30-,31-,32-/m0/s1
316 InChIKey InChI 1.03 XKXGRRZAMDHVGR-CPCREDONSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
316 "SYSTEMATIC NAME" ACDLabs 10.04 "N'-[(1S,2S)-2-[(2S)-4-benzyl-3-oxopiperazin-2-yl]-1-(3,5-difluorobenzyl)-2-hydroxyethyl]-5-methyl-N,N-dipropylbenzene-1,3-dicarboxamide"
316 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "N-[(1S,2S)-3-(3,5-difluorophenyl)-1-hydroxy-1-[(2S)-3-oxo-4-(phenylmethyl)piperazin-2-yl]propan-2-yl]-5-methyl-N',N'-dipropyl-benzene-1,3-dicarboxamide"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
316 'Create component' 2008-04-08 RCSB
316 'Modify aromatic_flag' 2011-06-04 RCSB
316 'Modify descriptor' 2011-06-04 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
316 C1 C 6.897 2.250 1
316 C2 C 8.196 3.000 2
316 C3 C 9.495 2.250 3
316 C4 C 9.495 0.750 4
316 C5 C 8.196 0.000 5
316 C6 C 6.897 0.750 6
316 C7 C 8.196 4.500 7
316 N1 N 6.897 5.250 8
316 O1 O 9.495 5.250 9
316 C8 C 6.897 6.750 10
316 C9 C 5.598 4.500 11
316 C10 C 4.299 5.250 12
316 C11 C 3.000 4.500 13
316 C12 C 5.598 7.500 14
316 C13 C 5.598 9.000 15
316 C14 C 5.598 0.000 16
316 C15 C 10.794 0.000 17
316 O2 O 10.794 -1.500 18
316 N2 N 12.093 0.750 19
316 C16 C 13.392 0.000 20
316 C17 C 13.392 -1.500 21
316 O3 O 12.093 -2.250 22
316 C18 C 14.691 0.750 23
316 C19 C 14.691 2.250 24
316 C20 C 13.392 3.000 25
316 C21 C 13.392 4.500 26
316 C22 C 14.691 5.250 27
316 C23 C 15.990 4.500 28
316 C24 C 15.990 3.000 29
316 F1 F 12.093 5.250 30
316 F2 F 17.290 5.250 31
316 C25 C 14.691 -2.250 32
316 C26 C 14.691 -3.750 33
316 N4 N 15.990 -4.500 34
316 C28 C 17.290 -3.750 35
316 C29 C 17.290 -2.250 36
316 N3 N 15.990 -1.500 37
316 O4 O 13.392 -4.500 38
316 C27 C 15.990 -6.000 39
316 C31 C 17.290 -6.750 40
316 C32 C 17.290 -8.250 41
316 C33 C 18.588 -9.000 42
316 C34 C 19.887 -8.250 43
316 C35 C 19.887 -6.750 44
316 C36 C 18.588 -6.000 45
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
316 C1 C2 DOUBLE NONE 1
316 C1 C6 SINGLE NONE 2
316 C2 C3 SINGLE NONE 3
316 C2 C7 SINGLE NONE 4
316 C3 C4 DOUBLE NONE 5
316 C4 C5 SINGLE NONE 6
316 C4 C15 SINGLE NONE 7
316 C5 C6 DOUBLE NONE 8
316 C6 C14 SINGLE NONE 9
316 C7 N1 SINGLE NONE 10
316 C7 O1 DOUBLE NONE 11
316 N1 C8 SINGLE NONE 12
316 N1 C9 SINGLE NONE 13
316 C8 C12 SINGLE NONE 14
316 C9 C10 SINGLE NONE 15
316 C10 C11 SINGLE NONE 16
316 C12 C13 SINGLE NONE 17
316 C15 O2 DOUBLE NONE 18
316 C15 N2 SINGLE NONE 19
316 N2 C16 SINGLE NONE 20
316 C16 C17 SINGLE NONE 21
316 C16 C18 SINGLE BEGINWEDGE 22
316 C17 O3 SINGLE BEGINWEDGE 23
316 C17 C25 SINGLE NONE 24
316 C18 C19 SINGLE NONE 25
316 C19 C20 DOUBLE NONE 26
316 C19 C24 SINGLE NONE 27
316 C20 C21 SINGLE NONE 28
316 C21 C22 DOUBLE NONE 29
316 C21 F1 SINGLE NONE 30
316 C22 C23 SINGLE NONE 31
316 C23 C24 DOUBLE NONE 32
316 C23 F2 SINGLE NONE 33
316 C25 C26 SINGLE NONE 34
316 C25 N3 SINGLE BEGINDASH 35
316 C26 N4 SINGLE NONE 36
316 C26 O4 DOUBLE NONE 37
316 N4 C28 SINGLE NONE 38
316 N4 C27 SINGLE NONE 39
316 C28 C29 SINGLE NONE 40
316 C29 N3 SINGLE NONE 41
316 C27 C31 SINGLE NONE 42
316 C31 C32 DOUBLE NONE 43
316 C31 C36 SINGLE NONE 44
316 C32 C33 SINGLE NONE 45
316 C33 C34 DOUBLE NONE 46
316 C34 C35 SINGLE NONE 47
316 C35 C36 DOUBLE NONE 48
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
316 MurckoScaffold S1 scaffold 'O=C(N[C@@H](Cc1ccccc1)C[C@@H]1NCCN(Cc2ccccc2)C1=O)c1ccccc1' InChI=1S/C27H29N3O2/c31-26(23-14-8-3-9-15-23)29-24(18-21-10-4-1-5-11-21)19-25-27(32)30(17-16-28-25)20-22-12-6-2-7-13-22/h1-15,24-25,28H,16-20H2,(H,29,31)/t24-,25-/m0/s1 PTAIKHADXCQYSP-DQEYMECFSA-N
316 amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
316 peptide F2 fragment NCC=O InChI=1S/C2H5NO/c3-1-2-4/h2H,1,3H2 LYIIBVSRGJSHAV-UHFFFAOYSA-N
316 phenyl F3 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
316 piperazine F4 fragment C1CNCCN1 InChI=1S/C4H10N2/c1-2-6-4-3-5-1/h5-6H,1-4H2 GLUUGHFHXGJENI-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
316 C1 S1 1
316 C2 S1 1
316 C3 S1 1
316 C4 S1 1
316 C5 S1 1
316 C6 S1 1
316 C15 S1 1
316 O2 S1 1
316 N2 S1 1
316 C16 S1 1
316 C17 S1 1
316 C18 S1 1
316 C19 S1 1
316 C20 S1 1
316 C21 S1 1
316 C22 S1 1
316 C23 S1 1
316 C24 S1 1
316 C25 S1 1
316 C26 S1 1
316 N4 S1 1
316 C28 S1 1
316 C29 S1 1
316 N3 S1 1
316 O4 S1 1
316 C27 S1 1
316 C31 S1 1
316 C32 S1 1
316 C33 S1 1
316 C34 S1 1
316 C35 S1 1
316 C36 S1 1
316 N1 F1 1
316 C7 F1 1
316 O1 F1 1
316 C2 F1 1
316 N2 F1 2
316 C15 F1 2
316 O2 F1 2
316 C4 F1 2
316 N4 F1 3
316 C26 F1 3
316 O4 F1 3
316 C25 F1 3
316 O4 F2 1
316 C26 F2 1
316 C25 F2 1
316 N3 F2 1
316 C1 F3 1
316 C2 F3 1
316 C3 F3 1
316 C4 F3 1
316 C5 F3 1
316 C6 F3 1
316 C19 F3 2
316 C20 F3 2
316 C21 F3 2
316 C22 F3 2
316 C23 F3 2
316 C24 F3 2
316 C31 F3 3
316 C32 F3 3
316 C33 F3 3
316 C34 F3 3
316 C35 F3 3
316 C36 F3 3
316 N4 F4 1
316 C26 F4 1
316 C25 F4 1
316 N3 F4 1
316 C29 F4 1
316 C28 F4 1
#
_pdbe_chem_comp_rdkit_properties.comp_id 316
_pdbe_chem_comp_rdkit_properties.exactmw 620.317
_pdbe_chem_comp_rdkit_properties.amw 620.741
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 8
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 3
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 17
_pdbe_chem_comp_rdkit_properties.NumHBD 3
_pdbe_chem_comp_rdkit_properties.NumHBA 5
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 45
_pdbe_chem_comp_rdkit_properties.NumAtoms 87
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 10
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 3
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.400
_pdbe_chem_comp_rdkit_properties.NumRings 4
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 3
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 322.185
_pdbe_chem_comp_rdkit_properties.tpsa 101.980
_pdbe_chem_comp_rdkit_properties.CrippenClogP 3.964
_pdbe_chem_comp_rdkit_properties.CrippenMR 167.307
_pdbe_chem_comp_rdkit_properties.chi0v 21.678
_pdbe_chem_comp_rdkit_properties.chi1v 11.431
_pdbe_chem_comp_rdkit_properties.chi2v 4.751
_pdbe_chem_comp_rdkit_properties.chi3v 4.751
_pdbe_chem_comp_rdkit_properties.chi4v 3.011
_pdbe_chem_comp_rdkit_properties.chi0n 63.678
_pdbe_chem_comp_rdkit_properties.chi1n 32.233
_pdbe_chem_comp_rdkit_properties.chi2n 4.751
_pdbe_chem_comp_rdkit_properties.chi3n 4.751
_pdbe_chem_comp_rdkit_properties.chi4n 3.011
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -4.150
_pdbe_chem_comp_rdkit_properties.kappa1 8.802
_pdbe_chem_comp_rdkit_properties.kappa2 15.723
_pdbe_chem_comp_rdkit_properties.kappa3 8.954
_pdbe_chem_comp_rdkit_properties.Phi 3.075
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
316 UniChem ZINC ZINC000024975929
316 UniChem SureChEMBL SCHEMBL12854796
316 UniChem PubChem 24808497
316 UniChem BindingDb 50271626
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
316 C1 5.472 -1.373 -0.286 ETKDGv3 1
316 C2 4.453 -0.559 0.036 ETKDGv3 2
316 C3 3.082 -1.115 0.138 ETKDGv3 3
316 C4 2.844 -2.417 -0.116 ETKDGv3 4
316 C5 3.979 -3.289 -0.515 ETKDGv3 5
316 C6 5.229 -2.804 -0.576 ETKDGv3 6
316 C7 4.714 0.865 0.342 ETKDGv3 7
316 N1 3.918 1.932 -0.226 ETKDGv3 8
316 O1 5.680 1.144 1.104 ETKDGv3 9
316 C8 3.865 3.245 0.441 ETKDGv3 10
316 C9 3.253 1.774 -1.532 ETKDGv3 11
316 C10 4.268 1.579 -2.667 ETKDGv3 12
316 C11 5.191 2.785 -2.830 ETKDGv3 13
316 C12 2.537 3.451 1.178 ETKDGv3 14
316 C13 2.354 2.467 2.331 ETKDGv3 15
316 C14 6.366 -3.684 -1.005 ETKDGv3 16
316 C15 1.479 -2.997 -0.026 ETKDGv3 17
316 O2 1.249 -4.103 -0.585 ETKDGv3 18
316 N2 0.433 -2.346 0.719 ETKDGv3 19
316 C16 -0.966 -2.803 0.695 ETKDGv3 20
316 C17 -1.693 -2.412 -0.631 ETKDGv3 21
316 O3 -1.060 -3.079 -1.695 ETKDGv3 22
316 C18 -1.701 -2.344 1.981 ETKDGv3 23
316 C19 -3.060 -2.979 2.176 ETKDGv3 24
316 C20 -3.204 -4.317 2.246 ETKDGv3 25
316 C21 -4.538 -4.916 2.462 ETKDGv3 26
316 C22 -5.609 -4.130 2.623 ETKDGv3 27
316 C23 -5.455 -2.662 2.600 ETKDGv3 28
316 C24 -4.249 -2.117 2.400 ETKDGv3 29
316 F1 -4.674 -6.265 2.499 ETKDGv3 30
316 F2 -6.535 -1.867 2.799 ETKDGv3 31
316 C25 -1.791 -0.893 -0.982 ETKDGv3 32
316 C26 -2.924 -0.172 -0.273 ETKDGv3 33
316 N4 -2.734 1.140 0.285 ETKDGv3 34
316 C28 -1.465 1.821 0.048 ETKDGv3 35
316 C29 -0.335 0.809 0.131 ETKDGv3 36
316 N3 -0.467 -0.228 -0.902 ETKDGv3 37
316 O4 -4.072 -0.695 -0.270 ETKDGv3 38
316 C27 -3.850 1.873 0.897 ETKDGv3 39
316 C31 -4.603 2.645 -0.151 ETKDGv3 40
316 C32 -5.705 2.133 -0.729 ETKDGv3 41
316 C33 -6.411 2.888 -1.785 ETKDGv3 42
316 C34 -5.950 4.081 -2.180 ETKDGv3 43
316 C35 -4.735 4.646 -1.558 ETKDGv3 44
316 C36 -4.095 3.967 -0.598 ETKDGv3 45
316 H1 6.481 -0.982 -0.355 ETKDGv3 46
316 H3 2.279 -0.450 0.415 ETKDGv3 47
316 H5 3.798 -4.332 -0.748 ETKDGv3 48
316 H8 3.980 4.050 -0.317 ETKDGv3 49
316 H8A 4.707 3.375 1.154 ETKDGv3 50
316 H9 2.561 0.910 -1.511 ETKDGv3 51
316 H9A 2.626 2.664 -1.762 ETKDGv3 52
316 H10 4.879 0.670 -2.486 ETKDGv3 53
316 H10A 3.712 1.426 -3.617 ETKDGv3 54
316 H11 5.821 2.917 -1.925 ETKDGv3 55
316 H11A 5.859 2.625 -3.702 ETKDGv3 56
316 H11B 4.596 3.707 -3.003 ETKDGv3 57
316 H12 1.690 3.362 0.467 ETKDGv3 58
316 H12A 2.517 4.484 1.590 ETKDGv3 59
316 H13 1.402 2.687 2.857 ETKDGv3 60
316 H13A 3.191 2.560 3.055 ETKDGv3 61
316 H13B 2.311 1.425 1.954 ETKDGv3 62
316 H14 6.259 -4.700 -0.567 ETKDGv3 63
316 H14A 6.375 -3.763 -2.112 ETKDGv3 64
316 H14B 7.337 -3.264 -0.666 ETKDGv3 65
316 HN2 0.716 -1.655 1.448 ETKDGv3 66
316 H16 -0.942 -3.913 0.728 ETKDGv3 67
316 H17 -2.729 -2.818 -0.551 ETKDGv3 68
316 HO3 -1.731 -3.186 -2.420 ETKDGv3 69
316 H18 -1.079 -2.612 2.863 ETKDGv3 70
316 H18A -1.791 -1.240 1.987 ETKDGv3 71
316 H20 -2.351 -4.976 2.155 ETKDGv3 72
316 H22 -6.586 -4.566 2.782 ETKDGv3 73
316 H24 -4.142 -1.041 2.414 ETKDGv3 74
316 H25 -2.109 -0.860 -2.050 ETKDGv3 75
316 H28 -1.478 2.292 -0.959 ETKDGv3 76
316 H28A -1.296 2.614 0.808 ETKDGv3 77
316 H29 0.630 1.334 -0.006 ETKDGv3 78
316 H29A -0.323 0.353 1.141 ETKDGv3 79
316 HN3 -0.244 0.209 -1.828 ETKDGv3 80
316 H27 -3.467 2.575 1.669 ETKDGv3 81
316 H27A -4.525 1.173 1.435 ETKDGv3 82
316 H32 -6.089 1.165 -0.431 ETKDGv3 83
316 H33 -7.300 2.472 -2.241 ETKDGv3 84
316 H34 -6.465 4.634 -2.954 ETKDGv3 85
316 H35 -4.363 5.609 -1.882 ETKDGv3 86
316 H36 -3.204 4.386 -0.148 ETKDGv3 87
#