data_2IU
#
_chem_comp.id 2IU
_chem_comp.name
"[[(2R,3S,5R)-5-[5-(1-benzofuran-2-yl)-2,4-bis(oxidanylidene)pyrimidin-1-yl]-3-oxidanyl-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C17 H19 N2 O15 P3"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms BFdUTP
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2021-06-21
_chem_comp.pdbx_modified_date 2022-06-24
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 584.258
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 2IU
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 7OWF
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBE
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
2IU C10 C1 C 0 1 Y N N N N N 19.830 -14.857 -5.747 6.094 2.165 0.562 C10 2IU 1
2IU C13 C2 C 0 1 Y N N N N N 21.961 -13.689 -8.392 9.022 1.727 -1.502 C13 2IU 2
2IU C15 C3 C 0 1 Y N N N N N 21.737 -11.775 -6.954 9.135 4.026 -0.806 C15 2IU 3
2IU C12 C4 C 0 1 Y N N N N N 21.092 -14.366 -7.549 7.844 1.565 -0.785 C12 2IU 4
2IU C14 C5 C 0 1 Y N N N N N 22.283 -12.380 -8.074 9.659 2.950 -1.509 C14 2IU 5
2IU C16 C6 C 0 1 Y N N N N N 20.841 -12.463 -6.140 7.977 3.889 -0.093 C16 2IU 6
2IU N N1 N 0 1 N N N N N N 19.172 -19.573 -7.070 3.027 -1.395 0.126 N 2IU 7
2IU C C7 C 0 1 N N S N N N 17.588 -19.499 -10.062 0.793 -3.983 -1.149 C 2IU 8
2IU O O1 O 0 1 N N N N N N 16.598 -19.784 -11.054 0.673 -4.673 -2.395 O 2IU 9
2IU C1 C8 C 0 1 N N N N N N 17.446 -20.347 -8.793 2.238 -3.477 -0.948 C1 2IU 10
2IU C11 C9 C 0 1 Y N N N N N 20.504 -13.781 -6.441 7.318 2.659 -0.073 C11 2IU 11
2IU C2 C10 C 0 1 N N R N N N 18.890 -20.442 -8.262 2.089 -1.942 -0.858 C2 2IU 12
2IU C3 C11 C 0 1 N N R N N N 18.956 -19.947 -10.552 -0.059 -2.695 -1.157 C3 2IU 13
2IU C4 C12 C 0 1 N N N N N N 19.601 -19.044 -11.575 -1.396 -2.935 -0.453 C4 2IU 14
2IU C5 C13 C 0 1 N N N N N N 19.623 -18.275 -7.231 4.022 -0.560 -0.292 C5 2IU 15
2IU C6 C14 C 0 1 N N N N N N 19.686 -17.370 -6.204 4.895 -0.044 0.623 C6 2IU 16
2IU C7 C15 C 0 1 N N N N N N 19.330 -17.820 -4.875 4.723 -0.414 2.036 C7 2IU 17
2IU C8 C16 C 0 1 N N N N N N 18.820 -20.058 -5.820 2.886 -1.722 1.421 C8 2IU 18
2IU C9 C17 C 0 1 Y N N N N N 20.055 -15.976 -6.458 5.984 0.862 0.205 C9 2IU 19
2IU N1 N2 N 0 1 N N N N N N 18.924 -19.147 -4.791 3.713 -1.246 2.368 N1 2IU 20
2IU O1 O2 O 0 1 N N N N N N 19.739 -20.022 -9.332 0.727 -1.728 -0.426 O1 2IU 21
2IU O10 O3 O 0 1 N N N N N N 17.572 -12.582 -12.944 -8.421 2.093 -1.028 O10 2IU 22
2IU O11 O4 O 0 1 N N N N N N 15.984 -13.508 -14.653 -7.410 3.392 0.885 O11 2IU 23
2IU O12 O5 O 0 1 N N N N N N 19.390 -17.106 -3.885 5.476 0.020 2.888 O12 2IU 24
2IU O13 O6 O 0 1 N N N N N N 18.431 -21.214 -5.645 1.981 -2.465 1.747 O13 2IU 25
2IU O14 O7 O 0 1 Y N N N N N 20.813 -15.716 -7.592 7.016 0.518 -0.589 O14 2IU 26
2IU O2 O8 O 0 1 N N N N N N 19.772 -17.765 -10.943 -2.214 -1.770 -0.572 O2 2IU 27
2IU O3 O9 O 0 1 N N N N N N 20.061 -16.447 -13.050 -3.639 -1.977 1.501 O3 2IU 28
2IU O4 O10 O 0 1 N N N N N N 20.477 -15.296 -10.778 -4.661 -2.725 -0.683 O4 2IU 29
2IU O5 O11 O 0 1 N N N N N N 18.133 -16.050 -11.408 -4.266 -0.180 -0.157 O5 2IU 30
2IU O6 O12 O 0 1 N N N N N N 17.223 -17.258 -13.525 -6.601 -0.192 0.802 O6 2IU 31
2IU O7 O13 O 0 1 N N N N N N 15.792 -17.102 -11.541 -4.894 1.282 1.936 O7 2IU 32
2IU O8 O14 O 0 1 N N N N N N 16.429 -14.918 -12.735 -5.870 1.886 -0.430 O8 2IU 33
2IU O9 O15 O 0 1 N N N N N N 18.263 -14.554 -14.428 -6.802 4.120 -1.454 O9 2IU 34
2IU P P1 P 0 1 N N N N N N 19.696 -16.320 -11.524 -3.694 -1.670 0.054 P 2IU 35
2IU P1 P2 P 0 1 N N N N N N 16.839 -16.386 -12.276 -5.433 0.680 0.543 P1 2IU 36
2IU P2 P3 P 0 1 N N N N N N 17.065 -13.843 -13.731 -7.132 2.884 -0.477 P2 2IU 37
2IU H1 H1 H 0 1 N N N N N N 19.257 -14.777 -4.835 5.419 2.725 1.193 H1 2IU 38
2IU H2 H2 H 0 1 N N N N N N 22.373 -14.167 -9.268 9.438 0.897 -2.053 H2 2IU 39
2IU H3 H3 H 0 1 N N N N N N 22.009 -10.759 -6.709 9.646 4.977 -0.822 H3 2IU 40
2IU H4 H4 H 0 1 N N N N N N 22.964 -11.827 -8.704 10.575 3.072 -2.068 H4 2IU 41
2IU H5 H5 H 0 1 N N N N N N 20.409 -11.977 -5.278 7.573 4.729 0.453 H5 2IU 42
2IU H6 H6 H 0 1 N N N N N N 17.607 -18.430 -9.803 0.497 -4.632 -0.325 H6 2IU 43
2IU H7 H7 H 0 1 N N N N N N 15.746 -19.502 -10.742 1.233 -5.458 -2.465 H7 2IU 44
2IU H8 H8 H 0 1 N N N N N N 16.789 -19.853 -8.061 2.657 -3.875 -0.024 H8 2IU 45
2IU H9 H9 H 0 1 N N N N N N 17.047 -21.345 -9.029 2.861 -3.750 -1.799 H9 2IU 46
2IU H10 H10 H 0 1 N N N N N N 19.100 -21.490 -8.001 2.256 -1.486 -1.834 H10 2IU 47
2IU H11 H11 H 0 1 N N N N N N 18.858 -20.954 -10.985 -0.224 -2.355 -2.180 H11 2IU 48
2IU H12 H12 H 0 1 N N N N N N 18.953 -18.947 -12.458 -1.902 -3.783 -0.914 H12 2IU 49
2IU H13 H13 H 0 1 N N N N N N 20.577 -19.451 -11.879 -1.218 -3.148 0.601 H13 2IU 50
2IU H14 H14 H 0 1 N N N N N N 19.941 -17.960 -8.214 4.119 -0.310 -1.339 H14 2IU 51
2IU H15 H15 H 0 1 N N N N N N 18.679 -19.478 -3.880 3.584 -1.501 3.295 H15 2IU 52
2IU H16 H16 H 0 1 N N N N N N 17.076 -11.819 -13.215 -8.310 1.731 -1.918 H16 2IU 53
2IU H17 H17 H 0 1 N N N N N N 21.089 -14.872 -11.368 -4.744 -2.584 -1.636 H17 2IU 54
2IU H18 H18 H 0 1 N N N N N N 15.592 -17.917 -11.987 -4.128 1.865 1.842 H18 2IU 55
2IU H19 H19 H 0 1 N N N N N N 18.079 -14.649 -15.355 -7.520 4.763 -1.531 H19 2IU 56
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
2IU O11 P2 DOUB N N 1
2IU O9 P2 SING N N 2
2IU P2 O10 SING N N 3
2IU P2 O8 SING N N 4
2IU O6 P1 DOUB N N 5
2IU O3 P DOUB N N 6
2IU O8 P1 SING N N 7
2IU P1 O7 SING N N 8
2IU P1 O5 SING N N 9
2IU C4 O2 SING N N 10
2IU C4 C3 SING N N 11
2IU P O5 SING N N 12
2IU P O2 SING N N 13
2IU P O4 SING N N 14
2IU O C SING N N 15
2IU C3 C SING N N 16
2IU C3 O1 SING N N 17
2IU C C1 SING N N 18
2IU O1 C2 SING N N 19
2IU C1 C2 SING N N 20
2IU C13 C14 DOUB Y N 21
2IU C13 C12 SING Y N 22
2IU C2 N SING N N 23
2IU C14 C15 SING Y N 24
2IU O14 C12 SING Y N 25
2IU O14 C9 SING Y N 26
2IU C12 C11 DOUB Y N 27
2IU C5 N SING N N 28
2IU C5 C6 DOUB N N 29
2IU N C8 SING N N 30
2IU C15 C16 DOUB Y N 31
2IU C9 C6 SING N N 32
2IU C9 C10 DOUB Y N 33
2IU C11 C16 SING Y N 34
2IU C11 C10 SING Y N 35
2IU C6 C7 SING N N 36
2IU C8 O13 DOUB N N 37
2IU C8 N1 SING N N 38
2IU C7 N1 SING N N 39
2IU C7 O12 DOUB N N 40
2IU C10 H1 SING N N 41
2IU C13 H2 SING N N 42
2IU C15 H3 SING N N 43
2IU C14 H4 SING N N 44
2IU C16 H5 SING N N 45
2IU C H6 SING N N 46
2IU O H7 SING N N 47
2IU C1 H8 SING N N 48
2IU C1 H9 SING N N 49
2IU C2 H10 SING N N 50
2IU C3 H11 SING N N 51
2IU C4 H12 SING N N 52
2IU C4 H13 SING N N 53
2IU C5 H14 SING N N 54
2IU N1 H15 SING N N 55
2IU O10 H16 SING N N 56
2IU O4 H17 SING N N 57
2IU O7 H18 SING N N 58
2IU O9 H19 SING N N 59
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
2IU InChI InChI 1.03 InChI=1S/C17H19N2O15P3/c20-11-6-15(32-14(11)8-30-36(26,27)34-37(28,29)33-35(23,24)25)19-7-10(16(21)18-17(19)22)13-5-9-3-1-2-4-12(9)31-13/h1-5,7,11,14-15,20H,6,8H2,(H,26,27)(H,28,29)(H,18,21,22)(H2,23,24,25)/t11-,14+,15+/m0/s1
2IU InChIKey InChI 1.03 VGLLIBLXYZHTBF-NILFDRSVSA-N
2IU SMILES_CANONICAL CACTVS 3.385 O[C@H]1C[C@@H](O[C@@H]1CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)N2C=C(C(=O)NC2=O)c3oc4ccccc4c3
2IU SMILES CACTVS 3.385 O[CH]1C[CH](O[CH]1CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)N2C=C(C(=O)NC2=O)c3oc4ccccc4c3
2IU SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 c1ccc2c(c1)cc(o2)C3=CN(C(=O)NC3=O)[C@H]4C[C@@H]([C@H](O4)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O
2IU SMILES "OpenEye OEToolkits" 2.0.7 c1ccc2c(c1)cc(o2)C3=CN(C(=O)NC3=O)C4CC(C(O4)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O
#
_pdbx_chem_comp_identifier.comp_id 2IU
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.7
_pdbx_chem_comp_identifier.identifier
"[[(2~{R},3~{S},5~{R})-5-[5-(1-benzofuran-2-yl)-2,4-bis(oxidanylidene)pyrimidin-1-yl]-3-oxidanyl-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
2IU 'Create component' 2021-06-21 PDBE
2IU 'Modify synonyms' 2022-06-22 PDBE
2IU 'Initial release' 2022-06-29 RCSB
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id 2IU
_pdbx_chem_comp_synonyms.name BFdUTP
_pdbx_chem_comp_synonyms.provenance AUTHOR
_pdbx_chem_comp_synonyms.type ?
#
_pdbe_chem_comp_synonyms.comp_id 2IU
_pdbe_chem_comp_synonyms.name BFdUTP
_pdbe_chem_comp_synonyms.provenance wwPDB
_pdbe_chem_comp_synonyms.type ?
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
2IU C10 C 7.018 3.329 1
2IU C13 C 4.299 0.622 2
2IU C15 C 3.000 2.872 3
2IU C12 C 5.598 1.372 4
2IU C14 C 3.000 1.372 5
2IU C16 C 4.299 3.622 6
2IU N N 11.643 0.823 7
2IU C C 12.897 -2.850 8
2IU O O 12.741 -4.342 9
2IU C1 C 11.783 -1.846 10
2IU C11 C 5.598 2.872 11
2IU C2 C 12.393 -0.476 12
2IU C3 C 14.196 -2.100 13
2IU C4 C 15.567 -2.710 14
2IU C5 C 10.143 0.823 15
2IU C6 C 9.393 2.122 16
2IU C7 C 10.143 3.421 17
2IU C8 C 12.393 2.122 18
2IU C9 C 7.893 2.122 19
2IU N1 N 11.643 3.421 20
2IU O1 O 13.885 -0.633 21
2IU O10 O 22.708 -3.266 22
2IU O11 O 24.689 -2.506 23
2IU O12 O 9.393 4.720 24
2IU O13 O 13.893 2.122 25
2IU O14 O 7.018 0.915 26
2IU O2 O 16.780 -1.829 27
2IU O3 O 18.761 -1.068 28
2IU O4 O 17.541 -3.809 29
2IU O5 O 19.521 -3.049 30
2IU O6 O 21.616 -3.381 31
2IU O7 O 19.853 -0.954 32
2IU O8 O 21.948 -1.285 33
2IU O9 O 23.928 -0.525 34
2IU P P 18.151 -2.438 35
2IU P1 P 20.735 -2.167 36
2IU P2 P 23.318 -1.895 37
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
2IU O11 P2 DOUBLE NONE 1
2IU O9 P2 SINGLE NONE 2
2IU P2 O10 SINGLE NONE 3
2IU P2 O8 SINGLE NONE 4
2IU O6 P1 DOUBLE NONE 5
2IU O3 P DOUBLE NONE 6
2IU O8 P1 SINGLE NONE 7
2IU P1 O7 SINGLE BEGINDASH 8
2IU P1 O5 SINGLE NONE 9
2IU C4 O2 SINGLE NONE 10
2IU C3 C4 SINGLE BEGINDASH 11
2IU P O5 SINGLE NONE 12
2IU P O2 SINGLE NONE 13
2IU P O4 SINGLE BEGINDASH 14
2IU C O SINGLE BEGINWEDGE 15
2IU C3 C SINGLE NONE 16
2IU C3 O1 SINGLE NONE 17
2IU C C1 SINGLE NONE 18
2IU O1 C2 SINGLE NONE 19
2IU C1 C2 SINGLE NONE 20
2IU C13 C14 DOUBLE NONE 21
2IU C13 C12 SINGLE NONE 22
2IU C2 N SINGLE BEGINDASH 23
2IU C14 C15 SINGLE NONE 24
2IU O14 C12 SINGLE NONE 25
2IU O14 C9 SINGLE NONE 26
2IU C12 C11 DOUBLE NONE 27
2IU C5 N SINGLE NONE 28
2IU C5 C6 DOUBLE NONE 29
2IU N C8 SINGLE NONE 30
2IU C15 C16 DOUBLE NONE 31
2IU C9 C6 SINGLE NONE 32
2IU C9 C10 DOUBLE NONE 33
2IU C11 C16 SINGLE NONE 34
2IU C11 C10 SINGLE NONE 35
2IU C6 C7 SINGLE NONE 36
2IU C8 O13 DOUBLE NONE 37
2IU C8 N1 SINGLE NONE 38
2IU C7 N1 SINGLE NONE 39
2IU C7 O12 DOUBLE NONE 40
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
2IU MurckoScaffold S1 scaffold 'O=c1[nH]c(=O)n([C@H]2CCCO2)cc1-c1cc2ccccc2o1' InChI=1S/C16H14N2O4/c19-15-11(13-8-10-4-1-2-5-12(10)22-13)9-18(16(20)17-15)14-6-3-7-21-14/h1-2,4-5,8-9,14H,3,6-7H2,(H,17,19,20)/t14-/m1/s1 DKNGYTUOOWISCX-CQSZACIVSA-N
2IU deoxyribose F1 fragment 'OCC1OC[CH2]C1O' InChI=1S/C5H10O3/c6-3-5-4(7)1-2-8-5/h4-7H,1-3H2 NSMOSDAEGJTOIQ-UHFFFAOYSA-N
2IU furan F2 fragment c1ccoc1 InChI=1S/C4H4O/c1-2-4-5-3-1/h1-4H YLQBMQCUIZJEEH-UHFFFAOYSA-N
2IU phenyl F3 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
2IU phosphate F4 fragment O=P(O)(O)O InChI=1S/H3O4P/c1-5(2,3)4/h(H3,1,2,3,4) NBIIXXVUZAFLBC-UHFFFAOYSA-N
2IU pyrimidine F5 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
2IU C10 S1 1
2IU C13 S1 1
2IU C15 S1 1
2IU C12 S1 1
2IU C14 S1 1
2IU C16 S1 1
2IU N S1 1
2IU C S1 1
2IU C1 S1 1
2IU C11 S1 1
2IU C2 S1 1
2IU C3 S1 1
2IU C5 S1 1
2IU C6 S1 1
2IU C7 S1 1
2IU C8 S1 1
2IU C9 S1 1
2IU N1 S1 1
2IU O1 S1 1
2IU O12 S1 1
2IU O13 S1 1
2IU O14 S1 1
2IU C2 F1 1
2IU C1 F1 1
2IU C F1 1
2IU O F1 1
2IU C3 F1 1
2IU O1 F1 1
2IU C4 F1 1
2IU O2 F1 1
2IU C12 F2 1
2IU C11 F2 1
2IU C10 F2 1
2IU C9 F2 1
2IU O14 F2 1
2IU C13 F3 1
2IU C14 F3 1
2IU C15 F3 1
2IU C16 F3 1
2IU C11 F3 1
2IU C12 F3 1
2IU O10 F4 1
2IU P2 F4 1
2IU O11 F4 1
2IU O9 F4 1
2IU O8 F4 1
2IU O2 F4 2
2IU P F4 2
2IU O3 F4 2
2IU O5 F4 2
2IU O4 F4 2
2IU O5 F4 3
2IU P1 F4 3
2IU O6 F4 3
2IU O8 F4 3
2IU O7 F4 3
2IU C6 F5 1
2IU C5 F5 1
2IU N F5 1
2IU C8 F5 1
2IU N1 F5 1
2IU C7 F5 1
#
_pdbe_chem_comp_rdkit_properties.comp_id 2IU
_pdbe_chem_comp_rdkit_properties.exactmw 584.000
_pdbe_chem_comp_rdkit_properties.amw 584.260
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 17
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 6
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 14
_pdbe_chem_comp_rdkit_properties.NumHBD 6
_pdbe_chem_comp_rdkit_properties.NumHBA 16
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 37
_pdbe_chem_comp_rdkit_properties.NumAtoms 56
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 20
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.294
_pdbe_chem_comp_rdkit_properties.NumRings 4
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 5
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 232.016
_pdbe_chem_comp_rdkit_properties.tpsa 257.280
_pdbe_chem_comp_rdkit_properties.CrippenClogP 1.933
_pdbe_chem_comp_rdkit_properties.CrippenMR 117.569
_pdbe_chem_comp_rdkit_properties.chi0v 19.543
_pdbe_chem_comp_rdkit_properties.chi1v 13.074
_pdbe_chem_comp_rdkit_properties.chi2v 7.142
_pdbe_chem_comp_rdkit_properties.chi3v 7.142
_pdbe_chem_comp_rdkit_properties.chi4v 5.046
_pdbe_chem_comp_rdkit_properties.chi0n 35.860
_pdbe_chem_comp_rdkit_properties.chi1n 17.680
_pdbe_chem_comp_rdkit_properties.chi2n 3.627
_pdbe_chem_comp_rdkit_properties.chi3n 3.627
_pdbe_chem_comp_rdkit_properties.chi4n 2.371
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.230
_pdbe_chem_comp_rdkit_properties.kappa1 12.304
_pdbe_chem_comp_rdkit_properties.kappa2 10.151
_pdbe_chem_comp_rdkit_properties.kappa3 6.806
_pdbe_chem_comp_rdkit_properties.Phi 3.376
#
_pdbe_chem_comp_external_mappings.comp_id 2IU
_pdbe_chem_comp_external_mappings.source UniChem
_pdbe_chem_comp_external_mappings.resource PubChem
_pdbe_chem_comp_external_mappings.resource_id 163410055
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
2IU C10 -6.408 0.739 0.491 ETKDGv3 1
2IU C13 -7.097 3.381 2.920 ETKDGv3 2
2IU C15 -9.221 3.003 1.728 ETKDGv3 3
2IU C12 -6.531 2.327 2.064 ETKDGv3 4
2IU C14 -8.393 3.704 2.755 ETKDGv3 5
2IU C16 -8.680 2.042 0.958 ETKDGv3 6
2IU N -1.541 -0.026 0.662 ETKDGv3 7
2IU C 1.696 -0.503 1.819 ETKDGv3 8
2IU O 2.689 -0.199 2.763 ETKDGv3 9
2IU C1 0.335 -0.040 2.276 ETKDGv3 10
2IU C11 -7.261 1.708 1.161 ETKDGv3 11
2IU C2 -0.268 0.615 1.033 ETKDGv3 12
2IU C3 1.912 0.289 0.536 ETKDGv3 13
2IU C4 2.800 -0.463 -0.458 ETKDGv3 14
2IU C5 -2.780 0.637 0.991 ETKDGv3 15
2IU C6 -3.980 0.096 0.714 ETKDGv3 16
2IU C7 -4.043 -1.253 0.095 ETKDGv3 17
2IU C8 -1.577 -1.330 0.049 ETKDGv3 18
2IU C9 -5.205 0.857 1.066 ETKDGv3 19
2IU N1 -2.835 -1.930 -0.252 ETKDGv3 20
2IU O1 0.649 0.531 -0.036 ETKDGv3 21
2IU O10 9.946 -1.817 -0.878 ETKDGv3 22
2IU O11 7.895 -0.217 -0.974 ETKDGv3 23
2IU O12 -5.146 -1.830 -0.095 ETKDGv3 24
2IU O13 -0.513 -1.951 -0.216 ETKDGv3 25
2IU O14 -5.234 1.843 2.056 ETKDGv3 26
2IU O2 2.999 0.341 -1.597 ETKDGv3 27
2IU O3 4.200 0.348 -3.913 ETKDGv3 28
2IU O4 3.063 -1.905 -3.217 ETKDGv3 29
2IU O5 5.400 -1.004 -1.980 ETKDGv3 30
2IU O6 5.592 -2.926 -3.782 ETKDGv3 31
2IU O7 6.827 -0.706 -4.370 ETKDGv3 32
2IU O8 7.734 -2.454 -2.394 ETKDGv3 33
2IU O9 9.390 -0.332 -3.124 ETKDGv3 34
2IU P 3.934 -0.540 -2.717 ETKDGv3 35
2IU P1 6.362 -1.787 -3.151 ETKDGv3 36
2IU P2 8.702 -1.172 -1.825 ETKDGv3 37
2IU H1 -6.687 0.095 -0.331 ETKDGv3 38
2IU H2 -6.487 3.883 3.661 ETKDGv3 39
2IU H3 -10.262 3.273 1.605 ETKDGv3 40
2IU H4 -8.841 4.475 3.369 ETKDGv3 41
2IU H5 -9.271 1.528 0.210 ETKDGv3 42
2IU H6 1.672 -1.599 1.610 ETKDGv3 43
2IU H7 2.583 -0.853 3.502 ETKDGv3 44
2IU H8 0.420 0.709 3.095 ETKDGv3 45
2IU H9 -0.269 -0.901 2.641 ETKDGv3 46
2IU H10 -0.435 1.696 1.243 ETKDGv3 47
2IU H11 2.388 1.269 0.772 ETKDGv3 48
2IU H12 2.297 -1.420 -0.731 ETKDGv3 49
2IU H13 3.773 -0.680 0.038 ETKDGv3 50
2IU H14 -2.738 1.614 1.459 ETKDGv3 51
2IU H15 -2.872 -2.876 -0.694 ETKDGv3 52
2IU H16 10.409 -2.460 -1.473 ETKDGv3 53
2IU H17 2.196 -1.548 -3.537 ETKDGv3 54
2IU H18 6.884 0.177 -3.925 ETKDGv3 55
2IU H19 9.829 -1.030 -3.672 ETKDGv3 56
#