data_2H0
#
_chem_comp.id 2H0
_chem_comp.name
"P-((((benzyloxy)carbonyl)amino)methyl)-N-((S)-1-(isopentylamino)-4-methyl-1-oxopentan-2-yl)phosphonamidic acid"
_chem_comp.type peptide-like
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C20 H34 N3 O5 P"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms
N~2~-[(S)-({[(benzyloxy)carbonyl]amino}methyl)(hydroxy)phosphoryl]-N-(3-methylbutyl)-L-leucinamide
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2013-10-17
_chem_comp.pdbx_modified_date 2021-03-01
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 427.475
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 2H0
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 4N5P
_chem_comp.pdbx_subcomponent_list "PHQ PGL LEU LEN"
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
2H0 C4 C4 C 0 1 N N N N N N 13.649 -41.658 10.855 -5.372 -1.324 0.278 C4 PHQ 1
2H0 C5 C5 C 0 1 Y N N N N N 15.015 -41.203 11.393 -6.723 -1.069 -0.339 C5 PHQ 2
2H0 C6 C6 C 0 1 Y N N N N N 16.166 -41.327 10.607 -7.832 -0.904 0.470 C6 PHQ 3
2H0 C7 C7 C 0 1 Y N N N N N 17.407 -40.920 11.103 -9.071 -0.669 -0.095 C7 PHQ 4
2H0 C8 C8 C 0 1 Y N N N N N 17.512 -40.372 12.388 -9.202 -0.599 -1.470 C8 PHQ 5
2H0 C9 C9 C 0 1 Y N N N N N 16.361 -40.245 13.175 -8.093 -0.762 -2.279 C9 PHQ 6
2H0 C10 C10 C 0 1 Y N N N N N 15.121 -40.661 12.679 -6.853 -0.993 -1.713 C10 PHQ 7
2H0 C3 C3 C 0 1 N N N N N N 12.901 -40.796 8.748 -3.480 -0.111 1.081 C3 PHQ 8
2H0 O21 O21 O 0 1 N N N N N N 13.669 -41.602 8.229 -2.980 -1.186 1.347 O21 PHQ 9
2H0 O4 O4 O 0 1 N N N N N N 13.029 -40.628 10.068 -4.707 -0.058 0.528 O4 PHQ 10
2H0 N2 N2 N 0 1 N N N N N N 12.072 -40.002 8.039 -2.808 1.028 1.339 N PGL 11
2H0 C22 C22 C 0 1 N N N N N N 11.988 -40.113 6.599 -1.473 0.971 1.941 C PGL 12
2H0 P P P 0 1 N N N N N N 11.508 -38.473 5.953 -0.211 1.037 0.627 P PGL 13
2H0 O2 O2 O 0 1 N N N N N N 12.592 -37.478 6.198 -0.356 2.298 -0.133 O1 PGL 14
2H0 O3 O3 O 0 1 N N N N N N 10.179 -38.062 6.521 -0.406 -0.214 -0.367 O3 PGL 15
2H0 N N N 0 1 N N N N N N 11.327 -38.853 4.192 1.322 0.971 1.318 N LEU 16
2H0 C2 C2 C 0 1 N N S N N N 10.092 -38.391 3.569 2.363 0.906 0.284 CA LEU 17
2H0 C21 C21 C 0 1 N N N N N N 8.922 -39.303 3.861 3.500 0.043 0.768 C LEU 18
2H0 O1 O1 O 0 1 N N N N N N 7.783 -38.842 3.869 3.575 -0.259 1.941 O LEU 19
2H0 C23 C23 C 0 1 N N N N N N 10.415 -38.419 2.062 2.882 2.316 -0.006 CB LEU 20
2H0 C24 C24 C 0 1 N N N N N N 9.292 -37.884 1.157 3.864 2.267 -1.178 CG LEU 21
2H0 C25 C25 C 0 1 N N N N N N 9.123 -36.350 1.295 3.114 1.887 -2.456 CD1 LEU 22
2H0 C26 C26 C 0 1 N N N N N N 9.556 -38.297 -0.312 4.513 3.641 -1.357 CD2 LEU 23
2H0 C31 C31 C 0 1 N N N N N N 9.295 -42.137 1.247 8.334 -3.056 -1.557 CD2 LEN 24
2H0 C29 C29 C 0 1 N N N N N N 8.401 -42.979 2.199 7.486 -2.623 -0.358 CG LEN 25
2H0 C30 C30 C 0 1 N N N N N N 7.590 -44.019 1.374 8.378 -1.928 0.672 CD1 LEN 26
2H0 C28 C28 C 0 1 N N N N N N 7.493 -42.034 3.039 6.398 -1.656 -0.826 CB LEN 27
2H0 C27 C27 C 0 1 N N N N N N 8.131 -41.554 4.371 5.475 -1.320 0.347 CA LEN 28
2H0 N21 N21 N 0 1 N N N N N N 9.202 -40.603 4.084 4.432 -0.394 -0.101 N LEN 29
2H0 H16 H16 H 0 1 N N N N N N 12.994 -41.904 11.703 -5.497 -1.861 1.218 H16 PHQ 30
2H0 H17 H17 H 0 1 N N N N N N 13.790 -42.551 10.229 -4.769 -1.923 -0.405 H17 PHQ 31
2H0 H18 H18 H 0 1 N N N N N N 16.095 -41.740 9.611 -7.730 -0.959 1.544 H18 PHQ 32
2H0 H19 H19 H 0 1 N N N N N N 18.291 -41.029 10.492 -9.938 -0.541 0.536 H19 PHQ 33
2H0 H20 H20 H 0 1 N N N N N N 18.471 -40.051 12.768 -10.170 -0.416 -1.912 H20 PHQ 34
2H0 H21 H21 H 0 1 N N N N N N 16.431 -39.825 14.167 -8.195 -0.708 -3.352 H21 PHQ 35
2H0 H22 H22 H 0 1 N N N N N N 14.238 -40.563 13.293 -5.985 -1.117 -2.345 H22 PHQ 36
2H0 H23 H23 H 0 1 N N N N N N 11.508 -39.328 8.515 -3.208 1.886 1.127 HN1 PGL 37
2H0 H14 H14 H 0 1 N N N N N N 11.231 -40.862 6.323 -1.342 1.817 2.614 H1 PGL 38
2H0 H15 H15 H 0 1 N N N N N N 12.964 -40.409 6.187 -1.367 0.041 2.501 H2 PGL 39
2H0 H13 H13 H 0 1 N N N N N N 10.264 -37.218 6.948 -0.324 -1.076 0.064 H6 PGL 40
2H0 H1 H1 H 0 1 N N N N N N 11.372 -39.846 4.086 1.398 0.193 1.957 H LEU 41
2H0 H2 H2 H 0 1 N N N N N N 9.857 -37.362 3.879 1.945 0.478 -0.627 HA LEU 42
2H0 H3 H3 H 0 1 N N N N N N 10.621 -39.461 1.774 2.044 2.966 -0.261 HB2 LEU 43
2H0 H4 H4 H 0 1 N N N N N N 11.313 -37.807 1.892 3.389 2.706 0.877 HB3 LEU 44
2H0 H5 H5 H 0 1 N N N N N N 8.350 -38.355 1.474 4.635 1.524 -0.975 HG LEU 45
2H0 H6 H6 H 0 1 N N N N N N 8.938 -36.094 2.349 3.825 1.779 -3.276 HD11 LEU 46
2H0 H7 H7 H 0 1 N N N N N N 10.040 -35.848 0.952 2.591 0.943 -2.303 HD12 LEU 47
2H0 H8 H8 H 0 1 N N N N N N 8.272 -36.018 0.682 2.393 2.667 -2.701 HD13 LEU 48
2H0 H9 H9 H 0 1 N N N N N N 9.670 -39.389 -0.371 3.742 4.384 -1.561 HD21 LEU 49
2H0 H10 H10 H 0 1 N N N N N N 8.709 -37.983 -0.939 5.047 3.912 -0.447 HD22 LEU 50
2H0 H11 H11 H 0 1 N N N N N N 10.476 -37.812 -0.669 5.213 3.606 -2.192 HD23 LEU 51
2H0 H32 H32 H 0 1 N N N N N N 9.867 -41.403 1.834 8.797 -2.179 -2.010 HD21 LEN 52
2H0 H33 H33 H 0 1 N N N N N N 9.991 -42.802 0.714 9.109 -3.745 -1.223 HD22 LEN 53
2H0 H34 H34 H 0 1 N N N N N N 8.661 -41.610 0.519 7.698 -3.551 -2.291 HD23 LEN 54
2H0 H28 H28 H 0 1 N N N N N N 9.058 -43.527 2.891 7.023 -3.500 0.095 HG LEN 55
2H0 H29 H29 H 0 1 N N N N N N 6.959 -44.613 2.051 8.841 -1.051 0.219 HD11 LEN 56
2H0 H30 H30 H 0 1 N N N N N N 6.954 -43.494 0.646 7.775 -1.620 1.526 HD12 LEN 57
2H0 H31 H31 H 0 1 N N N N N N 8.284 -44.686 0.841 9.154 -2.617 1.006 HD13 LEN 58
2H0 H26 H26 H 0 1 N N N N N N 7.260 -41.148 2.430 6.860 -0.741 -1.198 HB1 LEN 59
2H0 H27 H27 H 0 1 N N N N N N 6.563 -42.571 3.276 5.817 -2.120 -1.624 HB2 LEN 60
2H0 H24 H24 H 0 1 N N N N N N 7.364 -41.066 4.990 5.013 -2.235 0.719 HA1 LEN 61
2H0 H25 H25 H 0 1 N N N N N N 8.544 -42.418 4.912 6.055 -0.856 1.145 HA2 LEN 62
2H0 H12 H12 H 0 1 N N N N N N 10.150 -40.919 4.053 4.413 -0.094 -1.023 HN1 LEN 63
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
2H0 C26 C24 SING N N 1
2H0 C24 C25 SING N N 2
2H0 C24 C23 SING N N 3
2H0 C31 C29 SING N N 4
2H0 C30 C29 SING N N 5
2H0 C23 C2 SING N N 6
2H0 C29 C28 SING N N 7
2H0 C28 C27 SING N N 8
2H0 C2 C21 SING N N 9
2H0 C2 N SING N N 10
2H0 C21 O1 DOUB N N 11
2H0 C21 N21 SING N N 12
2H0 N21 C27 SING N N 13
2H0 N P SING N N 14
2H0 P O2 DOUB N N 15
2H0 P O3 SING N N 16
2H0 P C22 SING N N 17
2H0 C22 N2 SING N N 18
2H0 N2 C3 SING N N 19
2H0 O21 C3 DOUB N N 20
2H0 C3 O4 SING N N 21
2H0 O4 C4 SING N N 22
2H0 C6 C7 DOUB Y N 23
2H0 C6 C5 SING Y N 24
2H0 C4 C5 SING N N 25
2H0 C7 C8 SING Y N 26
2H0 C5 C10 DOUB Y N 27
2H0 C8 C9 DOUB Y N 28
2H0 C10 C9 SING Y N 29
2H0 N H1 SING N N 30
2H0 C2 H2 SING N N 31
2H0 C23 H3 SING N N 32
2H0 C23 H4 SING N N 33
2H0 C24 H5 SING N N 34
2H0 C25 H6 SING N N 35
2H0 C25 H7 SING N N 36
2H0 C25 H8 SING N N 37
2H0 C26 H9 SING N N 38
2H0 C26 H10 SING N N 39
2H0 C26 H11 SING N N 40
2H0 N21 H12 SING N N 41
2H0 O3 H13 SING N N 42
2H0 C22 H14 SING N N 43
2H0 C22 H15 SING N N 44
2H0 C4 H16 SING N N 45
2H0 C4 H17 SING N N 46
2H0 C6 H18 SING N N 47
2H0 C7 H19 SING N N 48
2H0 C8 H20 SING N N 49
2H0 C9 H21 SING N N 50
2H0 C10 H22 SING N N 51
2H0 N2 H23 SING N N 52
2H0 C27 H24 SING N N 53
2H0 C27 H25 SING N N 54
2H0 C28 H26 SING N N 55
2H0 C28 H27 SING N N 56
2H0 C29 H28 SING N N 57
2H0 C30 H29 SING N N 58
2H0 C30 H30 SING N N 59
2H0 C30 H31 SING N N 60
2H0 C31 H32 SING N N 61
2H0 C31 H33 SING N N 62
2H0 C31 H34 SING N N 63
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
2H0 SMILES ACDLabs 12.01 O=C(NCCC(C)C)C(NP(=O)(O)CNC(=O)OCc1ccccc1)CC(C)C
2H0 InChI InChI 1.03 InChI=1S/C20H34N3O5P/c1-15(2)10-11-21-19(24)18(12-16(3)4)23-29(26,27)14-22-20(25)28-13-17-8-6-5-7-9-17/h5-9,15-16,18H,10-14H2,1-4H3,(H,21,24)(H,22,25)(H2,23,26,27)/t18-/m0/s1
2H0 InChIKey InChI 1.03 HVPXEVZYFZOOTH-SFHVURJKSA-N
2H0 SMILES_CANONICAL CACTVS 3.385 CC(C)CCNC(=O)[C@H](CC(C)C)N[P](O)(=O)CNC(=O)OCc1ccccc1
2H0 SMILES CACTVS 3.385 CC(C)CCNC(=O)[CH](CC(C)C)N[P](O)(=O)CNC(=O)OCc1ccccc1
2H0 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 CC(C)CCNC(=O)[C@H](CC(C)C)NP(=O)(CNC(=O)OCc1ccccc1)O
2H0 SMILES "OpenEye OEToolkits" 1.7.6 CC(C)CCNC(=O)C(CC(C)C)NP(=O)(CNC(=O)OCc1ccccc1)O
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
2H0 "SYSTEMATIC NAME" ACDLabs 12.01 N~2~-[(S)-({[(benzyloxy)carbonyl]amino}methyl)(hydroxy)phosphoryl]-N-(3-methylbutyl)-L-leucinamide
2H0 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "N-[(2S)-4-methyl-1-(3-methylbutylamino)-1-oxidanylidene-pentan-2-yl]-(phenylmethoxycarbonylaminomethyl)phosphonamidic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
2H0 'Create component' 2013-10-17 RCSB
2H0 'Modify synonyms' 2013-11-12 RCSB
2H0 'Initial release' 2014-04-02 RCSB
2H0 'Modify synonyms' 2021-03-01 PDBE
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id 2H0
_pdbx_chem_comp_synonyms.name
N~2~-[(S)-({[(benzyloxy)carbonyl]amino}methyl)(hydroxy)phosphoryl]-N-(3-methylbutyl)-L-leucinamide
_pdbx_chem_comp_synonyms.provenance ?
_pdbx_chem_comp_synonyms.type ?
#
_pdbe_chem_comp_synonyms.comp_id 2H0
_pdbe_chem_comp_synonyms.name
'N~2~-[(S)-({[(benzyloxy)carbonyl]amino}methyl)(hydroxy)phosphoryl]-N-(3-methylbutyl)-L-leucinamide'
_pdbe_chem_comp_synonyms.provenance wwPDB
_pdbe_chem_comp_synonyms.type ?
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
2H0 C4 C 4.299 -3.000 1
2H0 C5 C 4.299 -4.500 2
2H0 C6 C 3.000 -5.250 3
2H0 C7 C 3.000 -6.750 4
2H0 C8 C 4.299 -7.500 5
2H0 C9 C 5.598 -6.750 6
2H0 C10 C 5.598 -5.250 7
2H0 C3 C 5.598 -0.750 8
2H0 O21 O 4.299 0.000 9
2H0 O4 O 5.598 -2.250 10
2H0 N2 N 6.897 0.000 11
2H0 C22 C 6.897 1.500 12
2H0 P P 8.196 2.250 13
2H0 O2 O 7.446 3.549 14
2H0 O3 O 8.946 0.951 15
2H0 N N 9.495 3.000 16
2H0 C2 C 9.495 4.500 17
2H0 C21 C 10.794 5.250 18
2H0 O1 O 10.794 6.750 19
2H0 C23 C 8.196 5.250 20
2H0 C24 C 8.196 6.750 21
2H0 C25 C 9.495 7.500 22
2H0 C26 C 6.897 7.500 23
2H0 C31 C 17.290 4.500 24
2H0 C29 C 15.990 5.250 25
2H0 C30 C 15.990 6.750 26
2H0 C28 C 14.691 4.500 27
2H0 C27 C 13.392 5.250 28
2H0 N21 N 12.093 4.500 29
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
2H0 C26 C24 SINGLE NONE 1
2H0 C24 C25 SINGLE NONE 2
2H0 C24 C23 SINGLE NONE 3
2H0 C31 C29 SINGLE NONE 4
2H0 C30 C29 SINGLE NONE 5
2H0 C2 C23 SINGLE BEGINWEDGE 6
2H0 C29 C28 SINGLE NONE 7
2H0 C28 C27 SINGLE NONE 8
2H0 C2 C21 SINGLE NONE 9
2H0 C2 N SINGLE NONE 10
2H0 C21 O1 DOUBLE NONE 11
2H0 C21 N21 SINGLE NONE 12
2H0 N21 C27 SINGLE NONE 13
2H0 N P SINGLE NONE 14
2H0 P O2 DOUBLE NONE 15
2H0 P O3 SINGLE BEGINDASH 16
2H0 P C22 SINGLE NONE 17
2H0 C22 N2 SINGLE NONE 18
2H0 N2 C3 SINGLE NONE 19
2H0 O21 C3 DOUBLE NONE 20
2H0 C3 O4 SINGLE NONE 21
2H0 O4 C4 SINGLE NONE 22
2H0 C6 C7 SINGLE NONE 23
2H0 C6 C5 DOUBLE NONE 24
2H0 C4 C5 SINGLE NONE 25
2H0 C7 C8 DOUBLE NONE 26
2H0 C5 C10 SINGLE NONE 27
2H0 C8 C9 SINGLE NONE 28
2H0 C10 C9 DOUBLE NONE 29
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
2H0 MurckoScaffold S1 scaffold c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
2H0 amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
2H0 peptide F2 fragment NCC=O InChI=1S/C2H5NO/c3-1-2-4/h2H,1,3H2 LYIIBVSRGJSHAV-UHFFFAOYSA-N
2H0 phenyl F3 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
2H0 C5 S1 1
2H0 C6 S1 1
2H0 C7 S1 1
2H0 C8 S1 1
2H0 C9 S1 1
2H0 C10 S1 1
2H0 N21 F1 1
2H0 C21 F1 1
2H0 O1 F1 1
2H0 C2 F1 1
2H0 O1 F2 1
2H0 C21 F2 1
2H0 C2 F2 1
2H0 N F2 1
2H0 C5 F3 1
2H0 C6 F3 1
2H0 C7 F3 1
2H0 C8 F3 1
2H0 C9 F3 1
2H0 C10 F3 1
#
_pdbe_chem_comp_rdkit_properties.comp_id 2H0
_pdbe_chem_comp_rdkit_properties.exactmw 427.224
_pdbe_chem_comp_rdkit_properties.amw 427.482
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 8
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 4
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 17
_pdbe_chem_comp_rdkit_properties.NumHBD 4
_pdbe_chem_comp_rdkit_properties.NumHBA 5
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 29
_pdbe_chem_comp_rdkit_properties.NumAtoms 63
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 9
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 2
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.600
_pdbe_chem_comp_rdkit_properties.NumRings 1
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 2
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 220.883
_pdbe_chem_comp_rdkit_properties.tpsa 116.760
_pdbe_chem_comp_rdkit_properties.CrippenClogP 3.168
_pdbe_chem_comp_rdkit_properties.CrippenMR 113.032
_pdbe_chem_comp_rdkit_properties.chi0v 14.725
_pdbe_chem_comp_rdkit_properties.chi1v 8.301
_pdbe_chem_comp_rdkit_properties.chi2v 2.840
_pdbe_chem_comp_rdkit_properties.chi3v 2.840
_pdbe_chem_comp_rdkit_properties.chi4v 1.755
_pdbe_chem_comp_rdkit_properties.chi0n 47.830
_pdbe_chem_comp_rdkit_properties.chi1n 23.473
_pdbe_chem_comp_rdkit_properties.chi2n 2.024
_pdbe_chem_comp_rdkit_properties.chi3n 2.024
_pdbe_chem_comp_rdkit_properties.chi4n 1.104
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.890
_pdbe_chem_comp_rdkit_properties.kappa1 4.949
_pdbe_chem_comp_rdkit_properties.kappa2 12.625
_pdbe_chem_comp_rdkit_properties.kappa3 11.640
_pdbe_chem_comp_rdkit_properties.Phi 2.155
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
2H0 UniChem ZINC ZINC000098208172
2H0 UniChem PubChem 73386668
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
2H0 C4 4.561 1.371 -2.124 ETKDGv3 1
2H0 C5 5.977 1.865 -2.115 ETKDGv3 2
2H0 C6 6.290 3.042 -1.545 ETKDGv3 3
2H0 C7 7.694 3.501 -1.506 ETKDGv3 4
2H0 C8 8.664 2.737 -2.022 ETKDGv3 5
2H0 C9 8.332 1.432 -2.630 ETKDGv3 6
2H0 C10 7.060 1.016 -2.672 ETKDGv3 7
2H0 C3 3.053 0.115 -0.616 ETKDGv3 8
2H0 O21 2.110 0.180 -1.453 ETKDGv3 9
2H0 O4 4.294 0.688 -0.904 ETKDGv3 10
2H0 N2 2.864 -0.554 0.636 ETKDGv3 11
2H0 C22 1.591 -1.150 1.029 ETKDGv3 12
2H0 P 0.458 0.136 1.648 ETKDGv3 13
2H0 O2 0.132 1.111 0.538 ETKDGv3 14
2H0 O3 1.214 0.976 2.907 ETKDGv3 15
2H0 N -1.036 -0.580 2.253 ETKDGv3 16
2H0 C2 -1.734 -1.363 1.212 ETKDGv3 17
2H0 C21 -3.199 -1.023 1.271 ETKDGv3 18
2H0 O1 -3.808 -1.080 2.375 ETKDGv3 19
2H0 C23 -1.521 -2.886 1.412 ETKDGv3 20
2H0 C24 -2.099 -3.761 0.272 ETKDGv3 21
2H0 C25 -2.109 -5.235 0.699 ETKDGv3 22
2H0 C26 -1.302 -3.606 -1.033 ETKDGv3 23
2H0 C31 -4.382 3.612 0.797 ETKDGv3 24
2H0 C29 -4.371 2.286 0.025 ETKDGv3 25
2H0 C30 -4.742 2.534 -1.445 ETKDGv3 26
2H0 C28 -5.327 1.274 0.700 ETKDGv3 27
2H0 C27 -5.270 -0.139 0.097 ETKDGv3 28
2H0 N21 -3.904 -0.657 0.076 ETKDGv3 29
2H0 H16 4.406 0.681 -2.981 ETKDGv3 30
2H0 H17 3.857 2.225 -2.238 ETKDGv3 31
2H0 H18 5.520 3.666 -1.108 ETKDGv3 32
2H0 H19 7.936 4.455 -1.055 ETKDGv3 33
2H0 H20 9.693 3.070 -1.992 ETKDGv3 34
2H0 H21 9.120 0.813 -3.038 ETKDGv3 35
2H0 H22 6.825 0.055 -3.114 ETKDGv3 36
2H0 H23 3.686 -0.662 1.271 ETKDGv3 37
2H0 H14 1.136 -1.685 0.170 ETKDGv3 38
2H0 H15 1.766 -1.882 1.846 ETKDGv3 39
2H0 H13 1.403 0.287 3.593 ETKDGv3 40
2H0 H1 -0.795 -1.173 3.080 ETKDGv3 41
2H0 H2 -1.365 -1.077 0.205 ETKDGv3 42
2H0 H3 -0.436 -3.099 1.515 ETKDGv3 43
2H0 H4 -1.994 -3.181 2.376 ETKDGv3 44
2H0 H5 -3.153 -3.467 0.076 ETKDGv3 45
2H0 H6 -2.726 -5.366 1.613 ETKDGv3 46
2H0 H7 -1.076 -5.588 0.909 ETKDGv3 47
2H0 H8 -2.549 -5.866 -0.102 ETKDGv3 48
2H0 H9 -1.416 -2.585 -1.450 ETKDGv3 49
2H0 H10 -1.679 -4.315 -1.800 ETKDGv3 50
2H0 H11 -0.223 -3.810 -0.861 ETKDGv3 51
2H0 H32 -3.669 4.330 0.339 ETKDGv3 52
2H0 H33 -5.399 4.061 0.789 ETKDGv3 53
2H0 H34 -4.071 3.446 1.850 ETKDGv3 54
2H0 H28 -3.332 1.892 0.062 ETKDGv3 55
2H0 H29 -4.589 1.614 -2.046 ETKDGv3 56
2H0 H30 -5.802 2.857 -1.533 ETKDGv3 57
2H0 H31 -4.091 3.323 -1.878 ETKDGv3 58
2H0 H26 -6.373 1.647 0.634 ETKDGv3 59
2H0 H27 -5.077 1.203 1.781 ETKDGv3 60
2H0 H24 -5.677 -0.123 -0.937 ETKDGv3 61
2H0 H25 -5.918 -0.822 0.688 ETKDGv3 62
2H0 H12 -3.431 -0.765 -0.849 ETKDGv3 63
#