data_1UN
#
_chem_comp.id 1UN
_chem_comp.name
"2-[2-HYDROXY-3-(3-HYDROXY-2-METHYL-BENZOYLAMINO)-4-PHENYL SULFANYL-BUTYL]-DECAHYDRO-ISOQUINOLINE-3-CARBOXYLIC ACID TERT-BUTYLAMIDE"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C32 H45 N3 O4 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms "NELFINAVIR MESYLATE AG1343"
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 1999-07-08
_chem_comp.pdbx_modified_date 2021-03-01
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 567.782
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 1UN
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1OHR
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
1UN C1 C1 C 0 1 N N S N N N 2.645 -4.153 16.315 -1.954 -2.151 -4.031 C1 1UN 1
1UN C2 C2 C 0 1 N N S N N N 3.461 -5.453 16.593 -1.101 -1.808 -5.255 C2 1UN 2
1UN C3 C3 C 0 1 N N N N N N 2.685 -6.686 16.166 -1.912 -2.013 -6.533 C3 1UN 3
1UN C4 C4 C 0 1 N N N N N N 2.272 -6.548 14.711 -3.178 -1.155 -6.507 C4 1UN 4
1UN C5 C5 C 0 1 N N N N N N 1.434 -5.277 14.506 -4.026 -1.544 -5.294 C5 1UN 5
1UN C6 C6 C 0 1 N N N N N N 2.293 -4.012 14.826 -3.224 -1.298 -4.015 C6 1UN 6
1UN N7 N7 N 0 1 N N N N N N 4.738 -2.846 16.041 -0.823 -0.423 -2.714 N7 1UN 7
1UN C8 C8 C 0 1 N N S N N N 5.578 -4.031 16.322 0.073 -0.129 -3.836 C8 1UN 8
1UN C9 C9 C 0 1 N N N N N N 4.828 -5.323 15.889 -0.669 -0.344 -5.137 C9 1UN 9
1UN C10 C10 C 0 1 N N N N N N 3.483 -2.959 16.821 -1.140 -1.854 -2.766 C10 1UN 10
1UN C11 C11 C 0 1 N N N N N N 6.848 -3.955 15.521 0.514 1.309 -3.744 C11 1UN 11
1UN N12 N12 N 0 1 N N N N N N 7.886 -4.465 16.233 1.716 1.678 -4.231 N12 1UN 12
1UN C13 C13 C 0 1 N N N N N N 9.289 -4.534 15.760 2.144 3.076 -4.141 C13 1UN 13
1UN C14 C14 C 0 1 N N N N N N 9.834 -3.158 15.420 3.534 3.224 -4.763 C14 1UN 14
1UN C15 C15 C 0 1 N N N N N N 9.334 -5.409 14.470 1.151 3.963 -4.895 C15 1UN 15
1UN C16 C16 C 0 1 N N N N N N 10.121 -5.118 16.937 2.194 3.501 -2.672 C16 1UN 16
1UN O17 O17 O 0 1 N N N N N N 6.830 -3.538 14.345 -0.211 2.134 -3.231 O17 1UN 17
1UN C18 C18 C 0 1 N N N N N N 5.338 -1.596 16.518 -0.046 -0.207 -1.485 C18 1UN 18
1UN C19 C19 C 0 1 N N R N N N 4.820 -0.446 15.641 -0.941 -0.451 -0.268 C19 1UN 19
1UN C20 C20 C 0 1 N N R N N N 5.512 -0.302 14.283 -0.226 0.034 0.994 C20 1UN 20
1UN O21 O21 O 0 1 N N N N N N 5.032 0.729 16.433 -1.216 -1.848 -0.151 O21 1UN 21
1UN N22 N22 N 0 1 N N N N N N 4.758 0.743 13.606 -1.082 -0.198 2.160 N22 1UN 22
1UN C23 C23 C 0 1 N N N N N N 6.932 0.183 14.310 1.086 -0.732 1.164 C23 1UN 23
1UN C24 C24 C 0 1 N N N N N N 3.879 0.393 12.645 -1.004 0.620 3.227 C24 1UN 24
1UN O25 O25 O 0 1 N N N N N N 3.710 -0.787 12.306 -0.223 1.551 3.223 O25 1UN 25
1UN C29 C29 C 0 1 Y N N N N N 3.198 1.488 11.992 -1.868 0.384 4.404 C29 1UN 26
1UN C30 C30 C 0 1 Y N N N N N 3.939 2.596 11.522 -2.610 -0.793 4.504 C30 1UN 27
1UN C31 C31 C 0 1 Y N N N N N 3.324 3.687 10.918 -3.416 -1.009 5.603 C31 1UN 28
1UN C32 C32 C 0 1 Y N N N N N 1.951 3.659 10.753 -3.486 -0.065 6.611 C32 1UN 29
1UN C33 C33 C 0 1 Y N N N N N 1.206 2.570 11.229 -2.746 1.105 6.524 C33 1UN 30
1UN C34 C34 C 0 1 Y N N N N N 1.806 1.460 11.829 -1.935 1.333 5.424 C34 1UN 31
1UN O38 O38 O 0 1 N N N N N N -0.164 2.619 11.201 -2.818 2.030 7.518 O38 1UN 32
1UN C39 C39 C 0 1 N N N N N N 0.935 0.343 12.334 -1.131 2.604 5.328 C39 1UN 33
1UN S74 S74 S 0 1 N N N N N N 7.747 -0.242 12.758 1.933 -0.156 2.661 S74 1UN 34
1UN C77 C77 C 0 1 Y N N N N N 7.704 1.203 11.820 3.369 -1.176 2.612 C77 1UN 35
1UN C78 C78 C 0 1 Y N N N N N 7.968 1.062 10.464 4.334 -1.068 3.606 C78 1UN 36
1UN C79 C79 C 0 1 Y N N N N N 7.972 2.204 9.686 5.458 -1.869 3.564 C79 1UN 37
1UN C80 C80 C 0 1 Y N N N N N 7.714 3.451 10.264 5.624 -2.777 2.534 C80 1UN 38
1UN C81 C81 C 0 1 Y N N N N N 7.443 3.580 11.630 4.666 -2.886 1.542 C81 1UN 39
1UN C82 C82 C 0 1 Y N N N N N 7.436 2.428 12.412 3.537 -2.093 1.581 C82 1UN 40
1UN H1 H1 H 0 1 N N N N N N 1.670 -4.189 16.854 -2.222 -3.208 -4.055 H1 1UN 41
1UN H2 H2 H 0 1 N N N N N N 3.638 -5.579 17.686 -0.217 -2.444 -5.282 H2 1UN 42
1UN H31A 1H3 H 0 0 N N N N N N 3.252 -7.626 16.355 -2.189 -3.065 -6.608 H31A 1UN 43
1UN H32A 2H3 H 0 0 N N N N N N 1.814 -6.887 16.833 -1.305 -1.737 -7.395 H32A 1UN 44
1UN H41 1H4 H 0 1 N N N N N N 3.151 -6.579 14.026 -3.750 -1.321 -7.419 H41 1UN 45
1UN H42 2H4 H 0 1 N N N N N N 1.742 -7.457 14.343 -2.903 -0.103 -6.436 H42 1UN 46
1UN H51 1H5 H 0 1 N N N N N N 0.987 -5.231 13.485 -4.292 -2.599 -5.359 H51 1UN 47
1UN H52 2H5 H 0 1 N N N N N N 0.488 -5.300 15.096 -4.934 -0.940 -5.276 H52 1UN 48
1UN H61 1H6 H 0 1 N N N N N N 1.798 -3.047 14.564 -3.830 -1.566 -3.150 H61 1UN 49
1UN H62 2H6 H 0 1 N N N N N N 3.177 -3.881 14.159 -2.953 -0.244 -3.955 H62 1UN 50
1UN H8 H8 H 0 1 N N N N N N 5.801 -4.053 17.414 0.948 -0.778 -3.807 H8 1UN 51
1UN H91 1H9 H 0 1 N N N N N N 5.455 -6.230 16.049 -0.009 -0.091 -5.967 H91 1UN 52
1UN H92 2H9 H 0 1 N N N N N N 4.721 -5.378 14.780 -1.549 0.298 -5.161 H92 1UN 53
1UN H101 1H10 H 0 0 N N N N N N 2.900 -2.008 16.812 -0.216 -2.431 -2.785 H101 1UN 54
1UN H102 2H10 H 0 0 N N N N N N 3.678 -3.022 17.916 -1.723 -2.129 -1.887 H102 1UN 55
1UN HNC HNC H 0 1 N N N N N N 7.720 -4.933 17.075 2.296 1.018 -4.641 HNC 1UN 56
1UN H141 1H14 H 0 0 N N N N N N 10.889 -3.209 15.064 3.853 4.264 -4.696 H141 1UN 57
1UN H142 2H14 H 0 0 N N N N N N 9.181 -2.632 14.684 4.242 2.592 -4.226 H142 1UN 58
1UN H143 3H14 H 0 0 N N N N N N 9.728 -2.454 16.278 3.498 2.921 -5.810 H143 1UN 59
1UN H151 1H15 H 0 0 N N N N N N 10.389 -5.460 14.114 1.115 3.660 -5.942 H151 1UN 60
1UN H152 2H15 H 0 0 N N N N N N 8.883 -6.417 14.621 0.161 3.857 -4.452 H152 1UN 61
1UN H153 3H15 H 0 0 N N N N N N 8.634 -5.045 13.681 1.470 5.003 -4.828 H153 1UN 62
1UN H161 1H16 H 0 0 N N N N N N 11.176 -5.169 16.581 2.902 2.869 -2.135 H161 1UN 63
1UN H162 2H16 H 0 0 N N N N N N 10.002 -4.547 17.887 2.513 4.541 -2.606 H162 1UN 64
1UN H163 3H16 H 0 0 N N N N N N 9.732 -6.093 17.311 1.204 3.395 -2.229 H163 1UN 65
1UN H181 1H18 H 0 0 N N N N N N 5.158 -1.421 17.604 0.323 0.817 -1.465 H181 1UN 66
1UN H182 2H18 H 0 0 N N N N N N 6.451 -1.640 16.553 0.795 -0.899 -1.462 H182 1UN 67
1UN H19 H19 H 0 1 N N N N N N 3.754 -0.634 15.372 -1.876 0.095 -0.389 H19 1UN 68
1UN H20 H20 H 0 1 N N N N N N 5.537 -1.312 13.813 -0.016 1.100 0.905 H20 1UN 69
1UN HOL HOL H 0 1 N N N N N N 5.974 0.772 16.537 -0.365 -2.293 -0.046 HOL 1UN 70
1UN HNM HNM H 0 1 N N N N N N 4.879 1.681 13.867 -1.705 -0.942 2.163 HNM 1UN 71
1UN H231 1H23 H 0 0 N N N N N N 6.999 1.272 14.535 0.876 -1.797 1.253 H231 1UN 72
1UN H232 2H23 H 0 0 N N N N N N 7.490 -0.199 15.196 1.723 -0.558 0.296 H232 1UN 73
1UN H30 H30 H 0 1 N N N N N N 5.036 2.609 11.630 -2.558 -1.533 3.719 H30 1UN 74
1UN H31 H31 H 0 1 N N N N N N 3.912 4.555 10.577 -3.993 -1.919 5.676 H31 1UN 75
1UN H32 H32 H 0 1 N N N N N N 1.452 4.501 10.244 -4.118 -0.240 7.469 H32 1UN 76
1UN HO HO H 0 1 N N N N N N -0.438 3.374 10.694 -3.538 2.633 7.287 HO 1UN 77
1UN H391 1H39 H 0 0 N N N N N N -0.172 0.320 12.204 -0.110 2.415 5.659 H391 1UN 78
1UN H392 2H39 H 0 0 N N N N N N 1.336 -0.607 11.910 -1.120 2.949 4.294 H392 1UN 79
1UN H393 3H39 H 0 0 N N N N N N 1.142 0.228 13.423 -1.583 3.368 5.961 H393 1UN 80
1UN H78 H78 H 0 1 N N N N N N 8.168 0.073 10.018 4.205 -0.359 4.410 H78 1UN 81
1UN H79 H79 H 0 1 N N N N N N 8.180 2.120 8.606 6.209 -1.786 4.336 H79 1UN 82
1UN H80 H80 H 0 1 N N N N N N 7.724 4.352 9.628 6.505 -3.402 2.503 H80 1UN 83
1UN H81 H81 H 0 1 N N N N N N 7.239 4.566 12.079 4.800 -3.596 0.739 H81 1UN 84
1UN H82 H82 H 0 1 N N N N N N 7.219 2.485 13.492 2.789 -2.179 0.807 H82 1UN 85
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
1UN C1 C2 SING N N 1
1UN C1 C6 SING N N 2
1UN C1 C10 SING N N 3
1UN C1 H1 SING N N 4
1UN C2 C3 SING N N 5
1UN C2 C9 SING N N 6
1UN C2 H2 SING N N 7
1UN C3 C4 SING N N 8
1UN C3 H31A SING N N 9
1UN C3 H32A SING N N 10
1UN C4 C5 SING N N 11
1UN C4 H41 SING N N 12
1UN C4 H42 SING N N 13
1UN C5 C6 SING N N 14
1UN C5 H51 SING N N 15
1UN C5 H52 SING N N 16
1UN C6 H61 SING N N 17
1UN C6 H62 SING N N 18
1UN N7 C8 SING N N 19
1UN N7 C10 SING N N 20
1UN N7 C18 SING N N 21
1UN C8 C9 SING N N 22
1UN C8 C11 SING N N 23
1UN C8 H8 SING N N 24
1UN C9 H91 SING N N 25
1UN C9 H92 SING N N 26
1UN C10 H101 SING N N 27
1UN C10 H102 SING N N 28
1UN C11 N12 SING N N 29
1UN C11 O17 DOUB N N 30
1UN N12 C13 SING N N 31
1UN N12 HNC SING N N 32
1UN C13 C14 SING N N 33
1UN C13 C15 SING N N 34
1UN C13 C16 SING N N 35
1UN C14 H141 SING N N 36
1UN C14 H142 SING N N 37
1UN C14 H143 SING N N 38
1UN C15 H151 SING N N 39
1UN C15 H152 SING N N 40
1UN C15 H153 SING N N 41
1UN C16 H161 SING N N 42
1UN C16 H162 SING N N 43
1UN C16 H163 SING N N 44
1UN C18 C19 SING N N 45
1UN C18 H181 SING N N 46
1UN C18 H182 SING N N 47
1UN C19 C20 SING N N 48
1UN C19 O21 SING N N 49
1UN C19 H19 SING N N 50
1UN C20 N22 SING N N 51
1UN C20 C23 SING N N 52
1UN C20 H20 SING N N 53
1UN O21 HOL SING N N 54
1UN N22 C24 SING N N 55
1UN N22 HNM SING N N 56
1UN C23 S74 SING N N 57
1UN C23 H231 SING N N 58
1UN C23 H232 SING N N 59
1UN C24 O25 DOUB N N 60
1UN C24 C29 SING N N 61
1UN C29 C30 DOUB Y N 62
1UN C29 C34 SING Y N 63
1UN C30 C31 SING Y N 64
1UN C30 H30 SING N N 65
1UN C31 C32 DOUB Y N 66
1UN C31 H31 SING N N 67
1UN C32 C33 SING Y N 68
1UN C32 H32 SING N N 69
1UN C33 C34 DOUB Y N 70
1UN C33 O38 SING N N 71
1UN C34 C39 SING N N 72
1UN O38 HO SING N N 73
1UN C39 H391 SING N N 74
1UN C39 H392 SING N N 75
1UN C39 H393 SING N N 76
1UN S74 C77 SING N N 77
1UN C77 C78 DOUB Y N 78
1UN C77 C82 SING Y N 79
1UN C78 C79 SING Y N 80
1UN C78 H78 SING N N 81
1UN C79 C80 DOUB Y N 82
1UN C79 H79 SING N N 83
1UN C80 C81 SING Y N 84
1UN C80 H80 SING N N 85
1UN C81 C82 DOUB Y N 86
1UN C81 H81 SING N N 87
1UN C82 H82 SING N N 88
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
1UN SMILES ACDLabs 10.04 O=C(c1cccc(O)c1C)NC(CSc2ccccc2)C(O)CN4C(C(=O)NC(C)(C)C)CC3CCCCC3C4
1UN SMILES_CANONICAL CACTVS 3.341 Cc1c(O)cccc1C(=O)N[C@@H](CSc2ccccc2)[C@H](O)CN3C[C@H]4CCCC[C@H]4C[C@H]3C(=O)NC(C)(C)C
1UN SMILES CACTVS 3.341 Cc1c(O)cccc1C(=O)N[CH](CSc2ccccc2)[CH](O)CN3C[CH]4CCCC[CH]4C[CH]3C(=O)NC(C)(C)C
1UN SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 Cc1c(cccc1O)C(=O)N[C@@H](CSc2ccccc2)[C@@H](C[N@@]3C[C@H]4CCCC[C@H]4C[C@H]3C(=O)NC(C)(C)C)O
1UN SMILES "OpenEye OEToolkits" 1.5.0 Cc1c(cccc1O)C(=O)NC(CSc2ccccc2)C(CN3CC4CCCCC4CC3C(=O)NC(C)(C)C)O
1UN InChI InChI 1.03 InChI=1S/C32H45N3O4S/c1-21-25(15-10-16-28(21)36)30(38)33-26(20-40-24-13-6-5-7-14-24)29(37)19-35-18-23-12-9-8-11-22(23)17-27(35)31(39)34-32(2,3)4/h5-7,10,13-16,22-23,26-27,29,36-37H,8-9,11-12,17-20H2,1-4H3,(H,33,38)(H,34,39)/t22-,23+,26-,27-,29+/m0/s1
1UN InChIKey InChI 1.03 QAGYKUNXZHXKMR-HKWSIXNMSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
1UN "SYSTEMATIC NAME" ACDLabs 10.04 (3S,4aS,8aS)-N-tert-butyl-2-[(2R,3R)-2-hydroxy-3-{[(3-hydroxy-2-methylphenyl)carbonyl]amino}-4-(phenylsulfanyl)butyl]decahydroisoquinoline-3-carboxamide
1UN "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 (2S,3S,4aS,8aS)-N-tert-butyl-2-[(2R,3R)-2-hydroxy-3-[(3-hydroxy-2-methyl-phenyl)carbonylamino]-4-phenylsulfanyl-butyl]-3,4,4a,5,6,7,8,8a-octahydro-1H-isoquinoline-3-carboxamide
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
1UN 'Create component' 1999-07-08 RCSB
1UN 'Modify descriptor' 2011-06-04 RCSB
1UN 'Modify synonyms' 2021-03-01 PDBE
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id 1UN
_pdbx_chem_comp_synonyms.name "NELFINAVIR MESYLATE AG1343"
_pdbx_chem_comp_synonyms.provenance ?
_pdbx_chem_comp_synonyms.type ?
#
_pdbe_chem_comp_drugbank_details.comp_id 1UN
_pdbe_chem_comp_drugbank_details.drugbank_id DB00220
_pdbe_chem_comp_drugbank_details.type 'small molecule'
_pdbe_chem_comp_drugbank_details.name Nelfinavir
_pdbe_chem_comp_drugbank_details.description
'Nelfinavir is a potent HIV-1 protease inhibitor. It is used in combination with other antiviral drugs in the treatment of HIV in both adults and children. Nelfinavir inhibits the HIV viral proteinase enzyme which prevents cleavage of the gag-pol polyprotein, resulting in noninfectious, immature viral particles.[L36485]'
_pdbe_chem_comp_drugbank_details.cas_number 159989-64-7
_pdbe_chem_comp_drugbank_details.mechanism_of_action
'HIV viral protease is an important enzyme for HIV maturation and pathogenicity since HIV produces its structural and key proteins in the form of a polyprotein that needs to be cleaved by a protease.[A246853] HIV protease is synthesized as part of the Gag-pol polyprotein, where Gag encodes for the capsid and matrix protein to form the outer protein shell, and Pol encodes for the reverse transcriptase and integrase protein to synthesize and incorporate its genome into host cells.[A246853, A246858] The Gag-pol polyprotein undergoes proteolytic cleavage by HIV protease to produce 66 molecular species which will assume conformational changes to become fully active.[A246853] Inhibition of protease, therefore, prevents HIV virion from fully maturing and becoming infective.[A246853]  Nelfinavir is a competitive inhibitor of the HIV protease by reversibly binding to the active site of the enzyme, preventing it from interacting with its substrate to produce mature and infectious viral particles.[L36485, L41608]'
#
loop_
_pdbe_chem_comp_synonyms.comp_id
_pdbe_chem_comp_synonyms.name
_pdbe_chem_comp_synonyms.provenance
_pdbe_chem_comp_synonyms.type
1UN 'NELFINAVIR MESYLATE AG1343' wwPDB ?
1UN Nelfinavir DrugBank ?
#
_pdbe_chem_comp_drugbank_classification.comp_id 1UN
_pdbe_chem_comp_drugbank_classification.drugbank_id DB00220
_pdbe_chem_comp_drugbank_classification.parent 'Alpha amino acid amides'
_pdbe_chem_comp_drugbank_classification.kingdom 'Organic compounds'
_pdbe_chem_comp_drugbank_classification.class 'Carboxylic acids and derivatives'
_pdbe_chem_comp_drugbank_classification.superclass 'Organic acids and derivatives'
_pdbe_chem_comp_drugbank_classification.description
'This compound belongs to the class of organic compounds known as alpha amino acid amides. These are amide derivatives of alpha amino acids.'
#
_pdbe_chem_comp_drugbank_targets.comp_id 1UN
_pdbe_chem_comp_drugbank_targets.drugbank_id DB00220
_pdbe_chem_comp_drugbank_targets.name 'Gag-Pol polyprotein'
_pdbe_chem_comp_drugbank_targets.organism HIV-1
_pdbe_chem_comp_drugbank_targets.uniprot_id P03369
_pdbe_chem_comp_drugbank_targets.pharmacologically_active yes
_pdbe_chem_comp_drugbank_targets.ordinal 1
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
1UN C1 C 5.700 2.441 1
1UN C2 C 5.700 3.941 2
1UN C3 C 4.359 4.742 3
1UN C4 C 3.000 3.972 4
1UN C5 C 3.000 2.409 5
1UN C6 C 4.359 1.639 6
1UN N7 N 8.298 2.441 7
1UN C8 C 8.298 3.941 8
1UN C9 C 6.999 4.691 9
1UN C10 C 6.999 1.690 10
1UN C11 C 9.597 4.691 11
1UN N12 N 9.597 6.191 12
1UN C13 C 10.896 6.941 13
1UN C14 C 12.195 7.691 14
1UN C15 C 10.146 8.239 15
1UN C16 C 11.646 5.641 16
1UN O17 O 10.896 3.941 17
1UN C18 C 9.597 1.690 18
1UN C19 C 9.597 0.191 19
1UN C20 C 10.896 -0.559 20
1UN O21 O 8.298 -0.559 21
1UN N22 N 10.896 -2.059 22
1UN C23 C 12.195 0.191 23
1UN C24 C 12.195 -2.809 24
1UN O25 O 13.494 -2.059 25
1UN C29 C 12.195 -4.309 26
1UN C30 C 13.494 -5.059 27
1UN C31 C 13.494 -6.559 28
1UN C32 C 12.195 -7.309 29
1UN C33 C 10.896 -6.559 30
1UN C34 C 10.896 -5.059 31
1UN O38 O 9.597 -7.309 32
1UN C39 C 9.597 -4.309 33
1UN S74 S 13.494 -0.559 34
1UN C77 C 14.793 0.191 35
1UN C78 C 16.092 -0.559 36
1UN C79 C 17.391 0.191 37
1UN C80 C 17.391 1.690 38
1UN C81 C 16.092 2.441 39
1UN C82 C 14.793 1.690 40
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
1UN C1 C2 SINGLE NONE 1
1UN C1 C6 SINGLE NONE 2
1UN C1 C10 SINGLE NONE 3
1UN C2 C3 SINGLE NONE 4
1UN C2 C9 SINGLE NONE 5
1UN C3 C4 SINGLE NONE 6
1UN C4 C5 SINGLE NONE 7
1UN C5 C6 SINGLE NONE 8
1UN N7 C8 SINGLE NONE 9
1UN N7 C10 SINGLE NONE 10
1UN N7 C18 SINGLE NONE 11
1UN C8 C9 SINGLE NONE 12
1UN C8 C11 SINGLE BEGINWEDGE 13
1UN C11 N12 SINGLE NONE 14
1UN C11 O17 DOUBLE NONE 15
1UN N12 C13 SINGLE NONE 16
1UN C13 C14 SINGLE NONE 17
1UN C13 C15 SINGLE NONE 18
1UN C13 C16 SINGLE NONE 19
1UN C18 C19 SINGLE NONE 20
1UN C19 C20 SINGLE NONE 21
1UN C19 O21 SINGLE BEGINDASH 22
1UN C20 N22 SINGLE NONE 23
1UN C20 C23 SINGLE BEGINDASH 24
1UN N22 C24 SINGLE NONE 25
1UN C23 S74 SINGLE NONE 26
1UN C24 O25 DOUBLE NONE 27
1UN C24 C29 SINGLE NONE 28
1UN C29 C30 DOUBLE NONE 29
1UN C29 C34 SINGLE NONE 30
1UN C30 C31 SINGLE NONE 31
1UN C31 C32 DOUBLE NONE 32
1UN C32 C33 SINGLE NONE 33
1UN C33 C34 DOUBLE NONE 34
1UN C33 O38 SINGLE NONE 35
1UN C34 C39 SINGLE NONE 36
1UN S74 C77 SINGLE NONE 37
1UN C77 C78 DOUBLE NONE 38
1UN C77 C82 SINGLE NONE 39
1UN C78 C79 SINGLE NONE 40
1UN C79 C80 DOUBLE NONE 41
1UN C80 C81 SINGLE NONE 42
1UN C81 C82 DOUBLE NONE 43
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
1UN MurckoScaffold S1 scaffold 'O=C(N[C@H](CCN1CC[C@@H]2CCCC[C@@H]2C1)CSc1ccccc1)c1ccccc1' InChI=1S/C26H34N2OS/c29-26(22-10-3-1-4-11-22)27-24(20-30-25-13-5-2-6-14-25)16-18-28-17-15-21-9-7-8-12-23(21)19-28/h1-6,10-11,13-14,21,23-24H,7-9,12,15-20H2,(H,27,29)/t21-,23+,24+/m0/s1 DPDFUSQWMUEBFU-QPTUXGOLSA-N
1UN amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
1UN cyclohexane F2 fragment C1CCCCC1 InChI=1S/C6H12/c1-2-4-6-5-3-1/h1-6H2 XDTMQSROBMDMFD-UHFFFAOYSA-N
1UN peptide F3 fragment NCC=O InChI=1S/C2H5NO/c3-1-2-4/h2H,1,3H2 LYIIBVSRGJSHAV-UHFFFAOYSA-N
1UN phenyl F4 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
1UN Z1741785925 F5 fragment CC1CCNC(C(N)=O)C1 InChI=1S/C7H14N2O/c1-5-2-3-9-6(4-5)7(8)10/h5-6,9H,2-4H2,1H3,(H2,8,10) RIOBEGOHZRAHCD-UHFFFAOYSA-N
1UN Z2856434901 F6 fragment CNCCC1CCCCC1 InChI=1S/C9H19N/c1-10-8-7-9-5-3-2-4-6-9/h9-10H,2-8H2,1H3 KCYFTGSOYOWCJF-UHFFFAOYSA-N
1UN Z32016974 F7 fragment CNC(=O)CCC1CCCCC1 InChI=1S/C10H19NO/c1-11-10(12)8-7-9-5-3-2-4-6-9/h9H,2-8H2,1H3,(H,11,12) NKQAGLASNCWFIR-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
1UN C1 S1 1
1UN C2 S1 1
1UN C3 S1 1
1UN C4 S1 1
1UN C5 S1 1
1UN C6 S1 1
1UN N7 S1 1
1UN C8 S1 1
1UN C9 S1 1
1UN C10 S1 1
1UN C18 S1 1
1UN C19 S1 1
1UN C20 S1 1
1UN N22 S1 1
1UN C23 S1 1
1UN C24 S1 1
1UN O25 S1 1
1UN C29 S1 1
1UN C30 S1 1
1UN C31 S1 1
1UN C32 S1 1
1UN C33 S1 1
1UN C34 S1 1
1UN S74 S1 1
1UN C77 S1 1
1UN C78 S1 1
1UN C79 S1 1
1UN C80 S1 1
1UN C81 S1 1
1UN C82 S1 1
1UN N12 F1 1
1UN C11 F1 1
1UN O17 F1 1
1UN C8 F1 1
1UN N22 F1 2
1UN C24 F1 2
1UN O25 F1 2
1UN C29 F1 2
1UN C1 F2 1
1UN C2 F2 1
1UN C3 F2 1
1UN C4 F2 1
1UN C5 F2 1
1UN C6 F2 1
1UN O17 F3 1
1UN C11 F3 1
1UN C8 F3 1
1UN N7 F3 1
1UN C29 F4 1
1UN C30 F4 1
1UN C31 F4 1
1UN C32 F4 1
1UN C33 F4 1
1UN C34 F4 1
1UN C77 F4 2
1UN C78 F4 2
1UN C79 F4 2
1UN C80 F4 2
1UN C81 F4 2
1UN C82 F4 2
1UN C3 F5 1
1UN C2 F5 1
1UN C1 F5 1
1UN C10 F5 1
1UN N7 F5 1
1UN C8 F5 1
1UN C9 F5 1
1UN C11 F5 1
1UN O17 F5 1
1UN N12 F5 1
1UN C10 F6 1
1UN N7 F6 1
1UN C8 F6 1
1UN C9 F6 1
1UN C2 F6 1
1UN C1 F6 1
1UN C6 F6 1
1UN C5 F6 1
1UN C4 F6 1
1UN C3 F6 1
1UN C18 F6 2
1UN N7 F6 2
1UN C8 F6 2
1UN C9 F6 2
1UN C2 F6 2
1UN C1 F6 2
1UN C6 F6 2
1UN C5 F6 2
1UN C4 F6 2
1UN C3 F6 2
1UN C13 F7 1
1UN N12 F7 1
1UN C11 F7 1
1UN O17 F7 1
1UN C8 F7 1
1UN C9 F7 1
1UN C2 F7 1
1UN C1 F7 1
1UN C6 F7 1
1UN C5 F7 1
1UN C4 F7 1
1UN C3 F7 1
#
_pdbe_chem_comp_rdkit_properties.comp_id 1UN
_pdbe_chem_comp_rdkit_properties.exactmw 567.313
_pdbe_chem_comp_rdkit_properties.amw 567.796
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 7
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 4
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 12
_pdbe_chem_comp_rdkit_properties.NumHBD 4
_pdbe_chem_comp_rdkit_properties.NumHBA 6
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 40
_pdbe_chem_comp_rdkit_properties.NumAtoms 85
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 8
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 2
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.562
_pdbe_chem_comp_rdkit_properties.NumRings 4
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 2
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 5
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 306.183
_pdbe_chem_comp_rdkit_properties.tpsa 101.900
_pdbe_chem_comp_rdkit_properties.CrippenClogP 4.068
_pdbe_chem_comp_rdkit_properties.CrippenMR 160.020
_pdbe_chem_comp_rdkit_properties.chi0v 20.199
_pdbe_chem_comp_rdkit_properties.chi1v 11.106
_pdbe_chem_comp_rdkit_properties.chi2v 4.977
_pdbe_chem_comp_rdkit_properties.chi3v 4.977
_pdbe_chem_comp_rdkit_properties.chi4v 3.182
_pdbe_chem_comp_rdkit_properties.chi0n 64.383
_pdbe_chem_comp_rdkit_properties.chi1n 32.501
_pdbe_chem_comp_rdkit_properties.chi2n 4.273
_pdbe_chem_comp_rdkit_properties.chi3n 4.273
_pdbe_chem_comp_rdkit_properties.chi4n 2.641
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.550
_pdbe_chem_comp_rdkit_properties.kappa1 6.814
_pdbe_chem_comp_rdkit_properties.kappa2 13.408
_pdbe_chem_comp_rdkit_properties.kappa3 8.015
_pdbe_chem_comp_rdkit_properties.Phi 2.284
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
1UN UniChem DrugBank DB00220
1UN UniChem 'Guide to Pharmacology' 11090
1UN UniChem 'KEGG LIGAND' C07257
1UN UniChem ChEBI 7496
1UN UniChem ZINC ZINC000003833846
1UN UniChem fdasrs HO3OGH5D7I
1UN UniChem SureChEMBL SCHEMBL38218
1UN UniChem PharmGKB PA450606
1UN UniChem HMDB HMDB0014365
1UN UniChem 'PubChem TPHARMA' 14862000
1UN UniChem LINCS LSM-5819
1UN UniChem ACTor 159989-64-7
1UN UniChem BindingDb 50061306
1UN UniChem BindingDb 518
1UN UniChem 'EPA CompTox Dashboard' DTXSID5035080
1UN UniChem DrugCentral 1893
1UN UniChem BRENDA 1193
1UN UniChem BRENDA 229722
1UN UniChem BRENDA 229723
1UN UniChem ChemicalBook CB8213806
1UN UniChem DailyMed NELFINAVIR
1UN UniChem ClinicalTrials AG-1343
1UN UniChem ClinicalTrials AG1343
1UN UniChem ClinicalTrials NELFINAVIR
1UN UniChem ClinicalTrials 'NELFINAVIR MESILATE'
1UN UniChem ClinicalTrials 'NELFINAVIR MESYLATE'
1UN UniChem ClinicalTrials VIRACEPT
1UN UniChem rxnorm NELFINAVIR
1UN UniChem rxnorm 'NELFINAVIR MESYLATE'
1UN UniChem rxnorm VIRACEPT
1UN UniChem MedChemExpress HY-15287
1UN UniChem 'Probes And Drugs' PD008635
1UN UniChem Nikkaji J1.642.472B
1UN UniChem 'PubChem TPHARMA' 14886478
1UN UniChem PubChem 64143
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
1UN C1 2.590 1.473 3.258 ETKDGv3 1
1UN C2 3.797 1.615 2.276 ETKDGv3 2
1UN C3 5.158 1.725 3.001 ETKDGv3 3
1UN C4 5.038 2.602 4.250 ETKDGv3 4
1UN C5 4.051 2.013 5.279 ETKDGv3 5
1UN C6 3.034 1.032 4.667 ETKDGv3 6
1UN N7 1.290 0.687 1.264 ETKDGv3 7
1UN C8 2.508 0.428 0.442 ETKDGv3 8
1UN C9 3.826 0.469 1.253 ETKDGv3 9
1UN C10 1.508 0.509 2.715 ETKDGv3 10
1UN C11 2.370 -0.909 -0.238 ETKDGv3 11
1UN N12 2.682 -1.045 -1.637 ETKDGv3 12
1UN C13 2.440 -2.259 -2.442 ETKDGv3 13
1UN C14 2.866 -1.989 -3.899 ETKDGv3 14
1UN C15 0.941 -2.612 -2.430 ETKDGv3 15
1UN C16 3.272 -3.437 -1.899 ETKDGv3 16
1UN O17 2.010 -1.908 0.440 ETKDGv3 17
1UN C18 0.618 1.970 0.948 ETKDGv3 18
1UN C19 -0.397 1.824 -0.206 ETKDGv3 19
1UN C20 -1.628 0.947 0.167 ETKDGv3 20
1UN O21 0.242 1.347 -1.363 ETKDGv3 21
1UN N22 -2.771 1.341 -0.663 ETKDGv3 22
1UN C23 -1.371 -0.561 -0.008 ETKDGv3 23
1UN C24 -3.680 2.384 -0.280 ETKDGv3 24
1UN O25 -3.477 3.044 0.776 ETKDGv3 25
1UN C29 -4.828 2.732 -1.146 ETKDGv3 26
1UN C30 -5.059 4.027 -1.426 ETKDGv3 27
1UN C31 -6.134 4.415 -2.355 ETKDGv3 28
1UN C32 -6.890 3.479 -2.933 ETKDGv3 29
1UN C33 -6.682 2.049 -2.615 ETKDGv3 30
1UN C34 -5.723 1.681 -1.737 ETKDGv3 31
1UN O38 -7.495 1.091 -3.222 ETKDGv3 32
1UN C39 -5.567 0.228 -1.357 ETKDGv3 33
1UN S74 -2.790 -1.536 0.598 ETKDGv3 34
1UN C77 -2.089 -3.094 0.055 ETKDGv3 35
1UN C78 -1.267 -3.786 0.859 ETKDGv3 36
1UN C79 -0.670 -5.055 0.391 ETKDGv3 37
1UN C80 -0.954 -5.517 -0.833 ETKDGv3 38
1UN C81 -1.866 -4.761 -1.717 ETKDGv3 39
1UN C82 -2.405 -3.610 -1.296 ETKDGv3 40
1UN H1 2.119 2.476 3.366 ETKDGv3 41
1UN H2 3.657 2.562 1.706 ETKDGv3 42
1UN H31A 5.911 2.168 2.312 ETKDGv3 43
1UN H32A 5.527 0.719 3.300 ETKDGv3 44
1UN H41 6.039 2.717 4.719 ETKDGv3 45
1UN H42 4.694 3.615 3.945 ETKDGv3 46
1UN H51 4.619 1.481 6.073 ETKDGv3 47
1UN H52 3.504 2.848 5.769 ETKDGv3 48
1UN H61 2.151 0.960 5.339 ETKDGv3 49
1UN H62 3.494 0.020 4.609 ETKDGv3 50
1UN H8 2.609 1.200 -0.353 ETKDGv3 51
1UN H91 4.680 0.607 0.553 ETKDGv3 52
1UN H92 3.985 -0.494 1.789 ETKDGv3 53
1UN H101 0.554 0.654 3.270 ETKDGv3 54
1UN H102 1.806 -0.546 2.902 ETKDGv3 55
1UN HNC 3.080 -0.204 -2.116 ETKDGv3 56
1UN H141 2.689 -2.882 -4.538 ETKDGv3 57
1UN H142 2.290 -1.138 -4.322 ETKDGv3 58
1UN H143 3.947 -1.734 -3.946 ETKDGv3 59
1UN H151 0.739 -3.491 -3.079 ETKDGv3 60
1UN H152 0.340 -1.754 -2.800 ETKDGv3 61
1UN H153 0.596 -2.862 -1.407 ETKDGv3 62
1UN H161 2.917 -3.764 -0.901 ETKDGv3 63
1UN H162 4.341 -3.146 -1.815 ETKDGv3 64
1UN H163 3.198 -4.314 -2.578 ETKDGv3 65
1UN H181 1.362 2.756 0.691 ETKDGv3 66
1UN H182 0.064 2.366 1.829 ETKDGv3 67
1UN H19 -0.763 2.859 -0.404 ETKDGv3 68
1UN H20 -1.882 1.118 1.237 ETKDGv3 69
1UN HOL -0.350 1.564 -2.130 ETKDGv3 70
1UN HNM -2.825 0.975 -1.641 ETKDGv3 71
1UN H231 -1.197 -0.795 -1.080 ETKDGv3 72
1UN H232 -0.485 -0.876 0.572 ETKDGv3 73
1UN H30 -4.430 4.805 -1.010 ETKDGv3 74
1UN H31 -6.296 5.461 -2.584 ETKDGv3 75
1UN H32 -7.669 3.771 -3.626 ETKDGv3 76
1UN HO -8.220 1.355 -3.878 ETKDGv3 77
1UN H391 -4.870 -0.272 -2.061 ETKDGv3 78
1UN H392 -5.183 0.133 -0.321 ETKDGv3 79
1UN H393 -6.542 -0.303 -1.380 ETKDGv3 80
1UN H78 -1.024 -3.414 1.846 ETKDGv3 81
1UN H79 -0.001 -5.605 1.039 ETKDGv3 82
1UN H80 -0.515 -6.444 -1.179 ETKDGv3 83
1UN H81 -2.091 -5.136 -2.707 ETKDGv3 84
1UN H82 -3.067 -3.052 -1.946 ETKDGv3 85
#