data_1Q2
#
_chem_comp.id 1Q2
_chem_comp.name (4R,6Z)-6-(3-fluoro-4-hydroxyphenyl)-4-hydroxy-6-iminohexan-2-one
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C12 H14 F N O3"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2013-04-23
_chem_comp.pdbx_modified_date 2014-09-19
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 239.243
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 1Q2
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 4K9G
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
1Q2 C1 C1 C 0 1 Y N N N N N 43.293 -35.743 46.640 4.038 0.765 -0.002 C1 1Q2 1
1Q2 O1 O1 O 0 1 N N N N N N 42.245 -36.466 46.174 5.339 1.153 0.024 O1 1Q2 2
1Q2 C2 C2 C 0 1 Y N N N N N 43.236 -34.360 46.603 3.720 -0.585 -0.111 C2 1Q2 3
1Q2 F2 F2 F 0 1 N N N N N N 42.131 -33.770 46.115 4.704 -1.507 -0.196 F2 1Q2 4
1Q2 C3 C3 C 0 1 Y N N N N N 44.303 -33.593 47.063 2.399 -0.984 -0.132 C3 1Q2 5
1Q2 C4 C4 C 0 1 Y N N N N N 45.444 -34.228 47.557 1.383 -0.029 -0.045 C4 1Q2 6
1Q2 C5 C5 C 0 1 Y N N N N N 45.485 -35.619 47.604 1.708 1.326 0.064 C5 1Q2 7
1Q2 C6 C6 C 0 1 Y N N N N N 44.417 -36.384 47.139 3.030 1.715 0.085 C6 1Q2 8
1Q2 C7 C7 C 0 1 N N N N N N 46.506 -33.456 48.053 -0.030 -0.450 -0.067 C7 1Q2 9
1Q2 N8 N8 N 0 1 N N N N N N 46.721 -32.219 47.602 -0.330 -1.705 -0.168 N8 1Q2 10
1Q2 O9 O9 O 0 1 N N N N N N 48.123 -31.737 49.448 -2.641 -0.937 1.140 O9 1Q2 11
1Q2 C10 C10 C 0 1 N N R N N N 48.547 -33.102 49.517 -2.487 -0.115 -0.018 C10 1Q2 12
1Q2 C11 C11 C 0 1 N N N N N N 47.353 -34.020 49.211 -1.125 0.581 0.028 C11 1Q2 13
1Q2 C12 C12 C 0 1 N N N N N N 49.083 -33.389 50.922 -3.597 0.937 -0.048 C12 1Q2 14
1Q2 C13 C13 C 0 1 N N N N N N 50.277 -32.485 51.276 -4.931 0.256 -0.216 C13 1Q2 15
1Q2 O13 O13 O 0 1 N N N N N N 50.835 -31.797 50.417 -4.987 -0.947 -0.304 O13 1Q2 16
1Q2 C14 C14 C 0 1 N N N N N N 50.761 -32.447 52.722 -6.194 1.076 -0.276 C14 1Q2 17
1Q2 HO1 HO1 H 0 1 N N N N N N 42.433 -37.393 46.266 5.721 1.190 0.912 HO1 1Q2 18
1Q2 H3 H3 H 0 1 N N N N N N 44.248 -32.515 47.038 2.152 -2.032 -0.217 H3 1Q2 19
1Q2 H5 H5 H 0 1 N N N N N N 46.357 -36.112 48.007 0.925 2.066 0.133 H5 1Q2 20
1Q2 H6 H6 H 0 1 N N N N N N 44.464 -37.463 47.167 3.281 2.762 0.174 H6 1Q2 21
1Q2 HN8 HN8 H 0 1 N N N N N N 47.459 -31.762 48.099 -1.260 -1.982 -0.183 HN8 1Q2 22
1Q2 HO9 HO9 H 0 1 N N N N N N 48.829 -31.171 49.736 -2.596 -0.452 1.976 HO9 1Q2 23
1Q2 H10 H10 H 0 1 N N N N N N 49.343 -33.294 48.783 -2.549 -0.734 -0.914 H10 1Q2 24
1Q2 H11 H11 H 0 1 N N N N N N 46.724 -34.104 50.109 -1.028 1.129 0.965 H11 1Q2 25
1Q2 H11A H11A H 0 0 N N N N N N 47.727 -35.016 48.931 -1.044 1.276 -0.809 H11A 1Q2 26
1Q2 H12 H12 H 0 1 N N N N N N 48.278 -33.217 51.652 -3.591 1.498 0.887 H12 1Q2 27
1Q2 H12A H12A H 0 0 N N N N N N 49.405 -34.440 50.972 -3.429 1.619 -0.881 H12A 1Q2 28
1Q2 H14 H14 H 0 1 N N N N N N 51.611 -31.754 52.807 -5.945 2.133 -0.181 H14 1Q2 29
1Q2 H14A H14A H 0 0 N N N N N N 49.943 -32.105 53.373 -6.694 0.905 -1.229 H14A 1Q2 30
1Q2 H14B H14B H 0 0 N N N N N N 51.077 -33.455 53.029 -6.855 0.784 0.539 H14B 1Q2 31
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
1Q2 O1 C1 SING N N 1
1Q2 C2 C1 DOUB Y N 2
1Q2 C1 C6 SING Y N 3
1Q2 O1 HO1 SING N N 4
1Q2 F2 C2 SING N N 5
1Q2 C2 C3 SING Y N 6
1Q2 C3 C4 DOUB Y N 7
1Q2 C3 H3 SING N N 8
1Q2 C4 C5 SING Y N 9
1Q2 C4 C7 SING N N 10
1Q2 C6 C5 DOUB Y N 11
1Q2 C5 H5 SING N N 12
1Q2 C6 H6 SING N N 13
1Q2 N8 C7 DOUB N N 14
1Q2 C7 C11 SING N N 15
1Q2 N8 HN8 SING N N 16
1Q2 O9 C10 SING N N 17
1Q2 O9 HO9 SING N N 18
1Q2 C11 C10 SING N N 19
1Q2 C10 C12 SING N N 20
1Q2 C10 H10 SING N N 21
1Q2 C11 H11 SING N N 22
1Q2 C11 H11A SING N N 23
1Q2 C12 C13 SING N N 24
1Q2 C12 H12 SING N N 25
1Q2 C12 H12A SING N N 26
1Q2 O13 C13 DOUB N N 27
1Q2 C13 C14 SING N N 28
1Q2 C14 H14 SING N N 29
1Q2 C14 H14A SING N N 30
1Q2 C14 H14B SING N N 31
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
1Q2 SMILES ACDLabs 12.01 Fc1cc(C(=[N@H])CC(O)CC(=O)C)ccc1O
1Q2 InChI InChI 1.03 InChI=1S/C12H14FNO3/c1-7(15)4-9(16)6-11(14)8-2-3-12(17)10(13)5-8/h2-3,5,9,14,16-17H,4,6H2,1H3/b14-11-/t9-/m0/s1
1Q2 InChIKey InChI 1.03 DBWKEXPZAPNKOY-ZQQXWWNKSA-N
1Q2 SMILES_CANONICAL CACTVS 3.370 CC(=O)C[C@H](O)CC(=N)c1ccc(O)c(F)c1
1Q2 SMILES CACTVS 3.370 CC(=O)C[CH](O)CC(=N)c1ccc(O)c(F)c1
1Q2 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "[H]/N=C(/C[C@H](CC(=O)C)O)\c1ccc(c(c1)F)O"
1Q2 SMILES "OpenEye OEToolkits" 1.7.6 CC(=O)CC(CC(=N)c1ccc(c(c1)F)O)O
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
1Q2 "SYSTEMATIC NAME" ACDLabs 12.01 (4R,6Z)-6-(3-fluoro-4-hydroxyphenyl)-4-hydroxy-6-iminohexan-2-one
1Q2 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 (4R)-6-azanylidene-6-(3-fluoranyl-4-oxidanyl-phenyl)-4-oxidanyl-hexan-2-one
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
1Q2 'Create component' 2013-04-23 RCSB
1Q2 'Other modification' 2013-05-20 RCSB
1Q2 'Initial release' 2014-09-24 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
1Q2 C1 C 3.972 -1.680 1
1Q2 O1 O 5.270 -2.431 2
1Q2 C2 C 3.974 -0.180 3
1Q2 F2 F 5.273 0.569 4
1Q2 C3 C 2.675 0.571 5
1Q2 C4 C 1.375 -0.178 6
1Q2 C5 C 1.374 -1.678 7
1Q2 C6 C 2.672 -2.429 8
1Q2 C7 C 0.077 0.574 9
1Q2 N8 N 0.078 2.074 10
1Q2 O9 O -2.520 2.076 11
1Q2 C10 C -2.521 0.576 12
1Q2 C11 C -1.223 -0.176 13
1Q2 C12 C -3.821 -0.173 14
1Q2 C13 C -5.119 0.577 15
1Q2 O13 O -5.118 2.077 16
1Q2 C14 C -6.419 -0.171 17
1Q2 HN8 H -1.220 2.824 18
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
1Q2 O1 C1 SINGLE NONE 1
1Q2 C2 C1 DOUBLE NONE 2
1Q2 C1 C6 SINGLE NONE 3
1Q2 F2 C2 SINGLE NONE 4
1Q2 C2 C3 SINGLE NONE 5
1Q2 C3 C4 DOUBLE NONE 6
1Q2 C4 C5 SINGLE NONE 7
1Q2 C4 C7 SINGLE ENDDOWNRIGHT 8
1Q2 C6 C5 DOUBLE NONE 9
1Q2 N8 C7 DOUBLE NONE 10
1Q2 C7 C11 SINGLE ENDDOWNRIGHT 11
1Q2 C10 O9 SINGLE BEGINDASH 12
1Q2 C11 C10 SINGLE NONE 13
1Q2 C10 C12 SINGLE NONE 14
1Q2 C12 C13 SINGLE NONE 15
1Q2 O13 C13 DOUBLE NONE 16
1Q2 C13 C14 SINGLE NONE 17
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
1Q2 MurckoScaffold S1 scaffold c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
1Q2 phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
1Q2 C1 S1 1
1Q2 C2 S1 1
1Q2 C3 S1 1
1Q2 C4 S1 1
1Q2 C5 S1 1
1Q2 C6 S1 1
1Q2 C1 F1 1
1Q2 C2 F1 1
1Q2 C3 F1 1
1Q2 C4 F1 1
1Q2 C5 F1 1
1Q2 C6 F1 1
#
_pdbe_chem_comp_rdkit_properties.comp_id 1Q2
_pdbe_chem_comp_rdkit_properties.exactmw 239.096
_pdbe_chem_comp_rdkit_properties.amw 239.246
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 4
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 3
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 8
_pdbe_chem_comp_rdkit_properties.NumHBD 3
_pdbe_chem_comp_rdkit_properties.NumHBA 4
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 17
_pdbe_chem_comp_rdkit_properties.NumAtoms 31
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 5
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.333
_pdbe_chem_comp_rdkit_properties.NumRings 1
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 1
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 118.123
_pdbe_chem_comp_rdkit_properties.tpsa 81.380
_pdbe_chem_comp_rdkit_properties.CrippenClogP 1.112
_pdbe_chem_comp_rdkit_properties.CrippenMR 59.939
_pdbe_chem_comp_rdkit_properties.chi0v 8.050
_pdbe_chem_comp_rdkit_properties.chi1v 4.025
_pdbe_chem_comp_rdkit_properties.chi2v 1.431
_pdbe_chem_comp_rdkit_properties.chi3v 1.431
_pdbe_chem_comp_rdkit_properties.chi4v 0.795
_pdbe_chem_comp_rdkit_properties.chi0n 22.050
_pdbe_chem_comp_rdkit_properties.chi1n 10.789
_pdbe_chem_comp_rdkit_properties.chi2n 1.431
_pdbe_chem_comp_rdkit_properties.chi3n 1.431
_pdbe_chem_comp_rdkit_properties.chi4n 0.795
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.750
_pdbe_chem_comp_rdkit_properties.kappa1 3.619
_pdbe_chem_comp_rdkit_properties.kappa2 5.540
_pdbe_chem_comp_rdkit_properties.kappa3 3.956
_pdbe_chem_comp_rdkit_properties.Phi 1.180
#
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
1Q2 C1 -4.369 0.371 -0.708 ETKDGv3 1
1Q2 O1 -5.631 0.858 -1.046 ETKDGv3 2
1Q2 C2 -3.250 0.948 -1.175 ETKDGv3 3
1Q2 F2 -3.319 2.028 -1.994 ETKDGv3 4
1Q2 C3 -1.924 0.412 -0.800 ETKDGv3 5
1Q2 C4 -1.817 -0.661 0.013 ETKDGv3 6
1Q2 C5 -3.068 -1.289 0.524 ETKDGv3 7
1Q2 C6 -4.267 -0.801 0.183 ETKDGv3 8
1Q2 C7 -0.494 -1.223 0.416 ETKDGv3 9
1Q2 N8 -0.451 -2.110 1.363 ETKDGv3 10
1Q2 O9 1.847 0.139 1.767 ETKDGv3 11
1Q2 C10 1.372 0.478 0.488 ETKDGv3 12
1Q2 C11 0.803 -0.769 -0.220 ETKDGv3 13
1Q2 C12 2.507 1.130 -0.322 ETKDGv3 14
1Q2 C13 3.717 0.239 -0.452 ETKDGv3 15
1Q2 O13 3.761 -0.594 -1.345 ETKDGv3 16
1Q2 C14 4.873 0.357 0.495 ETKDGv3 17
1Q2 HO1 -5.756 1.659 -1.654 ETKDGv3 18
1Q2 H3 -1.054 0.919 -1.190 ETKDGv3 19
1Q2 H5 -3.023 -2.152 1.176 ETKDGv3 20
1Q2 H6 -5.167 -1.268 0.560 ETKDGv3 21
1Q2 HN8 0.445 -2.529 1.697 ETKDGv3 22
1Q2 HO9 1.065 0.144 2.379 ETKDGv3 23
1Q2 H10 0.567 1.245 0.578 ETKDGv3 24
1Q2 H11 0.641 -0.568 -1.300 ETKDGv3 25
1Q2 H11A 1.547 -1.594 -0.172 ETKDGv3 26
1Q2 H12 2.139 1.405 -1.335 ETKDGv3 27
1Q2 H12A 2.798 2.080 0.176 ETKDGv3 28
1Q2 H14 5.791 0.625 -0.069 ETKDGv3 29
1Q2 H14A 5.032 -0.614 1.009 ETKDGv3 30
1Q2 H14B 4.685 1.136 1.263 ETKDGv3 31
#