data_1C8
#
_chem_comp.id 1C8
_chem_comp.name
(7R)-8-cyclopentyl-7-ethyl-5-methyl-2-[2-(1,3-thiazol-4-yl)-1H-imidazol-1-yl]-7,8-dihydropteridin-6(5H)-one
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C20 H23 N7 O S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2012-12-03
_chem_comp.pdbx_modified_date 2013-08-09
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 409.508
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 1C8
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 4I6H
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
1C8 O12 O12 O 0 1 N N N N N N 13.719 4.117 10.156 4.104 -2.819 0.541 O12 1C8 1
1C8 C9 C9 C 0 1 N N N N N N 12.647 4.728 10.221 3.232 -2.039 0.220 C9 1C8 2
1C8 N10 N10 N 0 1 N N N N N N 11.429 4.022 10.057 1.982 -2.483 -0.038 N10 1C8 3
1C8 C11 C11 C 0 1 N N N N N N 11.448 2.590 9.782 1.687 -3.918 -0.059 C11 1C8 4
1C8 C2 C2 C 0 1 Y N N N N N 10.220 4.708 10.090 0.975 -1.541 -0.284 C2 1C8 5
1C8 C8 C8 C 0 1 N N R N N N 12.681 6.178 10.459 3.531 -0.566 0.110 C8 1C8 6
1C8 C13 C13 C 0 1 N N N N N N 13.464 6.879 9.350 3.828 -0.217 -1.349 C13 1C8 7
1C8 C14 C14 C 0 1 N N N N N N 12.811 6.868 7.996 5.072 -0.978 -1.813 C14 1C8 8
1C8 N7 N7 N 0 1 N N N N N N 11.400 6.847 10.522 2.385 0.220 0.574 N7 1C8 9
1C8 C15 C15 C 0 1 N N N N N N 11.359 8.261 10.826 2.608 1.656 0.354 C15 1C8 10
1C8 C19 C19 C 0 1 N N N N N N 11.343 9.351 9.766 3.985 2.068 0.914 C19 1C8 11
1C8 C18 C18 C 0 1 N N N N N N 11.991 10.547 10.444 3.747 3.480 1.504 C18 1C8 12
1C8 C17 C17 C 0 1 N N N N N N 12.649 10.087 11.740 2.332 3.359 2.123 C17 1C8 13
1C8 C16 C16 C 0 1 N N N N N N 12.345 8.621 11.915 1.557 2.476 1.123 C16 1C8 14
1C8 C3 C3 C 0 1 Y N N N N N 10.222 6.148 10.336 1.198 -0.189 -0.004 C3 1C8 15
1C8 N4 N4 N 0 1 Y N N N N N 9.065 6.785 10.383 0.237 0.688 -0.271 N4 1C8 16
1C8 C5 C5 C 0 1 Y N N N N N 7.915 6.118 10.240 -0.917 0.284 -0.778 C5 1C8 17
1C8 N6 N6 N 0 1 Y N N N N N 7.889 4.806 9.992 -1.163 -0.989 -1.038 N6 1C8 18
1C8 C1 C1 C 0 1 Y N N N N N 9.001 4.090 9.904 -0.248 -1.922 -0.808 C1 1C8 19
1C8 N20 N20 N 0 1 Y N N N N N 6.789 6.785 10.265 -1.905 1.231 -1.046 N20 1C8 20
1C8 C24 C24 C 0 1 Y N N N N N 5.823 6.494 9.443 -1.745 2.408 -1.739 C24 1C8 21
1C8 C23 C23 C 0 1 Y N N N N N 4.828 7.410 9.707 -2.946 3.016 -1.764 C23 1C8 22
1C8 N22 N22 N 0 1 Y N N N N N 5.238 8.235 10.663 -3.827 2.247 -1.111 N22 1C8 23
1C8 C21 C21 C 0 1 Y N N N N N 6.471 7.839 10.953 -3.221 1.164 -0.676 C21 1C8 24
1C8 C25 C25 C 0 1 Y N N N N N 7.261 8.514 12.013 -3.851 0.066 0.086 C25 1C8 25
1C8 C29 C29 C 0 1 Y N N N N N 7.853 7.713 12.962 -5.180 0.002 0.322 C29 1C8 26
1C8 S28 S28 S 0 1 Y N N N N N 8.583 8.901 13.933 -5.492 -1.458 1.257 S28 1C8 27
1C8 C27 C27 C 0 1 Y N N N N N 8.065 10.281 13.056 -3.826 -1.841 1.242 C27 1C8 28
1C8 N26 N26 N 0 1 Y N N N N N 7.337 9.864 12.033 -3.163 -0.949 0.594 N26 1C8 29
1C8 H1 H1 H 0 1 N N N N N N 12.486 2.227 9.797 1.831 -4.304 -1.068 H1 1C8 30
1C8 H2 H2 H 0 1 N N N N N N 10.864 2.062 10.550 2.356 -4.437 0.627 H2 1C8 31
1C8 H3 H3 H 0 1 N N N N N N 11.008 2.401 8.792 0.654 -4.081 0.248 H3 1C8 32
1C8 H4 H4 H 0 1 N N N N N N 13.215 6.358 11.404 4.402 -0.328 0.721 H4 1C8 33
1C8 H5 H5 H 0 1 N N N N N N 14.442 6.384 9.259 2.978 -0.497 -1.970 H5 1C8 34
1C8 H6 H6 H 0 1 N N N N N N 13.610 7.928 9.648 4.005 0.855 -1.437 H6 1C8 35
1C8 H7 H7 H 0 1 N N N N N N 13.453 7.395 7.275 5.340 -0.658 -2.820 H7 1C8 36
1C8 H8 H8 H 0 1 N N N N N N 12.667 5.828 7.667 5.899 -0.772 -1.133 H8 1C8 37
1C8 H9 H9 H 0 1 N N N N N N 11.835 7.372 8.056 4.863 -2.048 -1.816 H9 1C8 38
1C8 H10 H10 H 0 1 N N N N N N 10.386 8.389 11.323 2.553 1.883 -0.711 H10 1C8 39
1C8 H11 H11 H 0 1 N N N N N N 10.311 9.586 9.465 4.302 1.377 1.694 H11 1C8 40
1C8 H12 H12 H 0 1 N N N N N N 11.922 9.043 8.883 4.725 2.109 0.114 H12 1C8 41
1C8 H13 H13 H 0 1 N N N N N N 12.751 10.981 9.778 4.487 3.707 2.272 H13 1C8 42
1C8 H14 H14 H 0 1 N N N N N N 11.225 11.304 10.668 3.761 4.235 0.718 H14 1C8 43
1C8 H15 H15 H 0 1 N N N N N N 13.737 10.239 11.682 2.383 2.875 3.098 H15 1C8 44
1C8 H16 H16 H 0 1 N N N N N N 12.243 10.657 12.589 1.867 4.341 2.206 H16 1C8 45
1C8 H17 H17 H 0 1 N N N N N N 11.902 8.439 12.905 0.993 3.102 0.431 H17 1C8 46
1C8 H18 H18 H 0 1 N N N N N N 13.264 8.026 11.809 0.882 1.809 1.659 H18 1C8 47
1C8 H19 H19 H 0 1 N N N N N N 8.953 3.033 9.689 -0.454 -2.960 -1.024 H19 1C8 48
1C8 H20 H20 H 0 1 N N N N N N 5.805 5.702 8.709 -0.830 2.775 -2.178 H20 1C8 49
1C8 H21 H21 H 0 1 N N N N N N 3.868 7.450 9.215 -3.163 3.965 -2.233 H21 1C8 50
1C8 H22 H22 H 0 1 N N N N N N 7.854 6.638 13.061 -5.919 0.719 -0.003 H22 1C8 51
1C8 H23 H23 H 0 1 N N N N N N 8.293 11.309 13.296 -3.391 -2.713 1.708 H23 1C8 52
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
1C8 C14 C13 SING N N 1
1C8 C13 C8 SING N N 2
1C8 C24 C23 DOUB Y N 3
1C8 C24 N20 SING Y N 4
1C8 C23 N22 SING Y N 5
1C8 C19 C18 SING N N 6
1C8 C19 C15 SING N N 7
1C8 C11 N10 SING N N 8
1C8 C1 N6 DOUB Y N 9
1C8 C1 C2 SING Y N 10
1C8 N6 C5 SING Y N 11
1C8 N10 C2 SING N N 12
1C8 N10 C9 SING N N 13
1C8 C2 C3 DOUB Y N 14
1C8 O12 C9 DOUB N N 15
1C8 C9 C8 SING N N 16
1C8 C5 N20 SING N N 17
1C8 C5 N4 DOUB Y N 18
1C8 N20 C21 SING Y N 19
1C8 C3 N4 SING Y N 20
1C8 C3 N7 SING N N 21
1C8 C18 C17 SING N N 22
1C8 C8 N7 SING N N 23
1C8 N7 C15 SING N N 24
1C8 N22 C21 DOUB Y N 25
1C8 C15 C16 SING N N 26
1C8 C21 C25 SING N N 27
1C8 C17 C16 SING N N 28
1C8 C25 N26 SING Y N 29
1C8 C25 C29 DOUB Y N 30
1C8 N26 C27 DOUB Y N 31
1C8 C29 S28 SING Y N 32
1C8 C27 S28 SING Y N 33
1C8 C11 H1 SING N N 34
1C8 C11 H2 SING N N 35
1C8 C11 H3 SING N N 36
1C8 C8 H4 SING N N 37
1C8 C13 H5 SING N N 38
1C8 C13 H6 SING N N 39
1C8 C14 H7 SING N N 40
1C8 C14 H8 SING N N 41
1C8 C14 H9 SING N N 42
1C8 C15 H10 SING N N 43
1C8 C19 H11 SING N N 44
1C8 C19 H12 SING N N 45
1C8 C18 H13 SING N N 46
1C8 C18 H14 SING N N 47
1C8 C17 H15 SING N N 48
1C8 C17 H16 SING N N 49
1C8 C16 H17 SING N N 50
1C8 C16 H18 SING N N 51
1C8 C1 H19 SING N N 52
1C8 C24 H20 SING N N 53
1C8 C23 H21 SING N N 54
1C8 C29 H22 SING N N 55
1C8 C27 H23 SING N N 56
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
1C8 SMILES ACDLabs 12.01 O=C5N(c1c(nc(nc1)n2ccnc2c3ncsc3)N(C4CCCC4)C5CC)C
1C8 InChI InChI 1.03 InChI=1S/C20H23N7OS/c1-3-15-19(28)25(2)16-10-22-20(24-18(16)27(15)13-6-4-5-7-13)26-9-8-21-17(26)14-11-29-12-23-14/h8-13,15H,3-7H2,1-2H3/t15-/m1/s1
1C8 InChIKey InChI 1.03 HGHXLCCYGNWFLX-OAHLLOKOSA-N
1C8 SMILES_CANONICAL CACTVS 3.370 CC[C@H]1N(C2CCCC2)c3nc(ncc3N(C)C1=O)n4ccnc4c5cscn5
1C8 SMILES CACTVS 3.370 CC[CH]1N(C2CCCC2)c3nc(ncc3N(C)C1=O)n4ccnc4c5cscn5
1C8 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 CC[C@@H]1C(=O)N(c2cnc(nc2N1C3CCCC3)n4ccnc4c5cscn5)C
1C8 SMILES "OpenEye OEToolkits" 1.7.6 CCC1C(=O)N(c2cnc(nc2N1C3CCCC3)n4ccnc4c5cscn5)C
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
1C8 "SYSTEMATIC NAME" ACDLabs 12.01 (7R)-8-cyclopentyl-7-ethyl-5-methyl-2-[2-(1,3-thiazol-4-yl)-1H-imidazol-1-yl]-7,8-dihydropteridin-6(5H)-one
1C8 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 (7R)-8-cyclopentyl-7-ethyl-5-methyl-2-[2-(1,3-thiazol-4-yl)imidazol-1-yl]-7H-pteridin-6-one
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
1C8 'Create component' 2012-12-03 RCSB
1C8 'Initial release' 2013-08-14 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
1C8 O12 O 4.299 3.062 1
1C8 C9 C 5.598 2.312 2
1C8 N10 N 6.897 3.062 3
1C8 C11 C 6.897 4.562 4
1C8 C2 C 8.196 2.312 5
1C8 C8 C 5.598 0.812 6
1C8 C13 C 4.299 0.062 7
1C8 C14 C 3.000 0.812 8
1C8 N7 N 6.897 0.062 9
1C8 C15 C 6.897 -1.438 10
1C8 C19 C 5.684 -2.319 11
1C8 C18 C 6.147 -3.746 12
1C8 C17 C 7.647 -3.746 13
1C8 C16 C 8.111 -2.319 14
1C8 C3 C 8.196 0.812 15
1C8 N4 N 9.537 0.011 16
1C8 C5 C 10.896 0.781 17
1C8 N6 N 10.896 2.344 18
1C8 C1 C 9.537 3.115 19
1C8 N20 N 12.192 0.026 20
1C8 C24 C 13.565 0.631 21
1C8 C23 C 14.564 -0.487 22
1C8 N22 N 13.809 -1.784 23
1C8 C21 C 12.343 -1.466 24
1C8 C25 C 11.225 -2.465 25
1C8 C29 C 9.759 -2.148 26
1C8 S28 S 9.004 -3.444 27
1C8 C27 C 10.003 -4.562 28
1C8 N26 N 11.376 -3.958 29
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
1C8 C14 C13 SINGLE NONE 1
1C8 C8 C13 SINGLE BEGINDASH 2
1C8 C24 C23 DOUBLE NONE 3
1C8 C24 N20 SINGLE NONE 4
1C8 C23 N22 SINGLE NONE 5
1C8 C19 C18 SINGLE NONE 6
1C8 C19 C15 SINGLE NONE 7
1C8 C11 N10 SINGLE NONE 8
1C8 C1 N6 DOUBLE NONE 9
1C8 C1 C2 SINGLE NONE 10
1C8 N6 C5 SINGLE NONE 11
1C8 N10 C2 SINGLE NONE 12
1C8 N10 C9 SINGLE NONE 13
1C8 C2 C3 DOUBLE NONE 14
1C8 O12 C9 DOUBLE NONE 15
1C8 C9 C8 SINGLE NONE 16
1C8 C5 N20 SINGLE NONE 17
1C8 C5 N4 DOUBLE NONE 18
1C8 N20 C21 SINGLE NONE 19
1C8 C3 N4 SINGLE NONE 20
1C8 C3 N7 SINGLE NONE 21
1C8 C18 C17 SINGLE NONE 22
1C8 C8 N7 SINGLE NONE 23
1C8 N7 C15 SINGLE NONE 24
1C8 N22 C21 DOUBLE NONE 25
1C8 C15 C16 SINGLE NONE 26
1C8 C21 C25 SINGLE NONE 27
1C8 C17 C16 SINGLE NONE 28
1C8 C25 N26 SINGLE NONE 29
1C8 C25 C29 DOUBLE NONE 30
1C8 N26 C27 DOUBLE NONE 31
1C8 C29 S28 SINGLE NONE 32
1C8 C27 S28 SINGLE NONE 33
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
1C8 MurckoScaffold S1 scaffold O=C1CN(C2CCCC2)c2nc(-n3ccnc3-c3cscn3)ncc2N1 InChI=1S/C17H17N7OS/c25-14-8-24(11-3-1-2-4-11)16-12(21-14)7-19-17(22-16)23-6-5-18-15(23)13-9-26-10-20-13/h5-7,9-11H,1-4,8H2,(H,21,25) HFGXDTVZFUIRNF-UHFFFAOYSA-N
1C8 amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
1C8 cyclopentane F2 fragment C1CCCC1 InChI=1S/C5H10/c1-2-4-5-3-1/h1-5H2 RGSFGYAAUTVSQA-UHFFFAOYSA-N
1C8 imidazole F3 fragment 'c1c[nH]cn1' InChI=1S/C3H4N2/c1-2-5-3-4-1/h1-3H,(H,4,5) RAXXELZNTBOGNW-UHFFFAOYSA-N
1C8 peptide F4 fragment NCC=O InChI=1S/C2H5NO/c3-1-2-4/h2H,1,3H2 LYIIBVSRGJSHAV-UHFFFAOYSA-N
1C8 pyrimidine F5 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N
1C8 thiazole F6 fragment c1cscn1 InChI=1S/C3H3NS/c1-2-5-3-4-1/h1-3H FZWLAAWBMGSTSO-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
1C8 O12 S1 1
1C8 C9 S1 1
1C8 N10 S1 1
1C8 C2 S1 1
1C8 C8 S1 1
1C8 N7 S1 1
1C8 C15 S1 1
1C8 C19 S1 1
1C8 C18 S1 1
1C8 C17 S1 1
1C8 C16 S1 1
1C8 C3 S1 1
1C8 N4 S1 1
1C8 C5 S1 1
1C8 N6 S1 1
1C8 C1 S1 1
1C8 N20 S1 1
1C8 C24 S1 1
1C8 C23 S1 1
1C8 N22 S1 1
1C8 C21 S1 1
1C8 C25 S1 1
1C8 C29 S1 1
1C8 S28 S1 1
1C8 C27 S1 1
1C8 N26 S1 1
1C8 N10 F1 1
1C8 C9 F1 1
1C8 O12 F1 1
1C8 C8 F1 1
1C8 C15 F2 1
1C8 C19 F2 1
1C8 C18 F2 1
1C8 C17 F2 1
1C8 C16 F2 1
1C8 C24 F3 1
1C8 C23 F3 1
1C8 N22 F3 1
1C8 C21 F3 1
1C8 N20 F3 1
1C8 O12 F4 1
1C8 C9 F4 1
1C8 C8 F4 1
1C8 N7 F4 1
1C8 C2 F5 1
1C8 C1 F5 1
1C8 N6 F5 1
1C8 C5 F5 1
1C8 N4 F5 1
1C8 C3 F5 1
1C8 C29 F6 1
1C8 C25 F6 1
1C8 N26 F6 1
1C8 C27 F6 1
1C8 S28 F6 1
#
_pdbe_chem_comp_rdkit_properties.comp_id 1C8
_pdbe_chem_comp_rdkit_properties.exactmw 409.168
_pdbe_chem_comp_rdkit_properties.amw 409.519
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 8
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 0
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 6
_pdbe_chem_comp_rdkit_properties.NumHBD 0
_pdbe_chem_comp_rdkit_properties.NumHBA 8
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 29
_pdbe_chem_comp_rdkit_properties.NumAtoms 52
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 9
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 1
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.450
_pdbe_chem_comp_rdkit_properties.NumRings 5
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 4
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 1
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 205.117
_pdbe_chem_comp_rdkit_properties.tpsa 80.040
_pdbe_chem_comp_rdkit_properties.CrippenClogP 1.959
_pdbe_chem_comp_rdkit_properties.CrippenMR 108.855
_pdbe_chem_comp_rdkit_properties.chi0v 14.763
_pdbe_chem_comp_rdkit_properties.chi1v 8.480
_pdbe_chem_comp_rdkit_properties.chi2v 4.286
_pdbe_chem_comp_rdkit_properties.chi3v 4.286
_pdbe_chem_comp_rdkit_properties.chi4v 3.000
_pdbe_chem_comp_rdkit_properties.chi0n 36.947
_pdbe_chem_comp_rdkit_properties.chi1n 19.164
_pdbe_chem_comp_rdkit_properties.chi2n 3.809
_pdbe_chem_comp_rdkit_properties.chi3n 3.809
_pdbe_chem_comp_rdkit_properties.chi4n 2.584
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.810
_pdbe_chem_comp_rdkit_properties.kappa1 5.874
_pdbe_chem_comp_rdkit_properties.kappa2 7.218
_pdbe_chem_comp_rdkit_properties.kappa3 2.913
_pdbe_chem_comp_rdkit_properties.Phi 1.462
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
1C8 UniChem ZINC ZINC000095921025
1C8 UniChem SureChEMBL SCHEMBL2049807
1C8 UniChem PubChem 58405923
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
1C8 O12 -3.288 -1.589 -2.262 ETKDGv3 1
1C8 C9 -2.279 -1.247 -1.586 ETKDGv3 2
1C8 N10 -0.947 -1.369 -2.127 ETKDGv3 3
1C8 C11 -0.718 -2.063 -3.399 ETKDGv3 4
1C8 C2 0.162 -0.828 -1.371 ETKDGv3 5
1C8 C8 -2.461 -0.736 -0.183 ETKDGv3 6
1C8 C13 -2.349 -1.896 0.828 ETKDGv3 7
1C8 C14 -3.562 -2.824 0.788 ETKDGv3 8
1C8 N7 -1.417 0.268 0.096 ETKDGv3 9
1C8 C15 -1.752 1.627 0.571 ETKDGv3 10
1C8 C19 -2.595 2.400 -0.453 ETKDGv3 11
1C8 C18 -3.849 2.863 0.278 ETKDGv3 12
1C8 C17 -3.527 2.771 1.759 ETKDGv3 13
1C8 C16 -2.545 1.621 1.882 ETKDGv3 14
1C8 C3 -0.065 -0.025 -0.311 ETKDGv3 15
1C8 N4 1.043 0.543 0.406 ETKDGv3 16
1C8 C5 2.274 0.286 0.073 ETKDGv3 17
1C8 N6 2.541 -0.567 -1.051 ETKDGv3 18
1C8 C1 1.574 -1.100 -1.738 ETKDGv3 19
1C8 N20 3.351 0.897 0.797 ETKDGv3 20
1C8 C24 3.319 2.219 1.316 ETKDGv3 21
1C8 C23 4.558 2.644 1.481 ETKDGv3 22
1C8 N22 5.481 1.629 1.093 ETKDGv3 23
1C8 C21 4.754 0.632 0.696 ETKDGv3 24
1C8 C25 5.340 -0.669 0.319 ETKDGv3 25
1C8 C29 6.612 -0.807 -0.062 ETKDGv3 26
1C8 S28 6.942 -2.526 -0.378 ETKDGv3 27
1C8 C27 5.271 -2.938 0.064 ETKDGv3 28
1C8 N26 4.586 -1.892 0.398 ETKDGv3 29
1C8 H1 -0.227 -3.040 -3.208 ETKDGv3 30
1C8 H2 -0.072 -1.444 -4.057 ETKDGv3 31
1C8 H3 -1.665 -2.249 -3.947 ETKDGv3 32
1C8 H4 -3.469 -0.273 -0.097 ETKDGv3 33
1C8 H5 -2.262 -1.486 1.857 ETKDGv3 34
1C8 H6 -1.428 -2.490 0.634 ETKDGv3 35
1C8 H7 -3.636 -3.329 -0.198 ETKDGv3 36
1C8 H8 -3.458 -3.604 1.572 ETKDGv3 37
1C8 H9 -4.494 -2.252 0.980 ETKDGv3 38
1C8 H10 -0.822 2.213 0.753 ETKDGv3 39
1C8 H11 -2.866 1.783 -1.338 ETKDGv3 40
1C8 H12 -2.026 3.285 -0.816 ETKDGv3 41
1C8 H13 -4.129 3.900 -0.009 ETKDGv3 42
1C8 H14 -4.693 2.178 0.040 ETKDGv3 43
1C8 H15 -3.042 3.714 2.095 ETKDGv3 44
1C8 H16 -4.442 2.592 2.364 ETKDGv3 45
1C8 H17 -3.118 0.682 2.021 ETKDGv3 46
1C8 H18 -1.876 1.759 2.759 ETKDGv3 47
1C8 H19 1.820 -1.744 -2.570 ETKDGv3 48
1C8 H20 2.423 2.799 1.493 ETKDGv3 49
1C8 H21 4.842 3.623 1.842 ETKDGv3 50
1C8 H22 7.328 -0.002 -0.161 ETKDGv3 51
1C8 H23 4.854 -3.936 0.066 ETKDGv3 52
#