data_12F
#
_chem_comp.id 12F
_chem_comp.name
"[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl (2R,3S,4S)-5-[(1R,3R,3aS)-3-[2-(benzyloxy)-3-fluorophenyl]-1-hydroxy-10,11-dimethyl-4,6-dioxo-2,3,5,6-tetrahydro-1H-benzo[g]pyrrolo[2,1-e]pteridin-8(4H)-yl]-2,3,4-trihydroxypentyl dihydrogen diphosphate"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C43 H48 F N9 O17 P2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms
"[(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL]METHYL (2R,3S,4S)-5-[(1R,3R,3AS)-1-HYDROXY-10,11-DIMETHYL-4,6-DIOXO-3-(3-FLUORO-2-BENZYLOXYPHENYL)-2,3,5,6-TETRAHYDRO-1H-BENZO[G] PYRROLO[2,1-E]PTERIDIN-8(4H)-YL]-2,3,4-TRIHYDROXYPENTYL DIHYDROGEN DIPHOSPHATE"
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2010-01-06
_chem_comp.pdbx_modified_date 2021-03-13
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 1043.837
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 12F
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 3ABU
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBJ
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
12F C01 C01 C 0 1 Y N N N N N 33.733 53.423 42.267 -5.539 4.407 -1.992 C01 12F 1
12F O01 O01 O 0 1 N N N N N N 33.115 51.716 40.443 -6.715 2.345 -2.328 O01 12F 2
12F C02 C02 C 0 1 Y N N N N N 32.579 53.588 43.027 -5.306 4.733 -0.669 C02 12F 3
12F C03 C03 C 0 1 Y N N N N N 32.681 54.012 44.347 -5.394 6.049 -0.255 C03 12F 4
12F C04 C04 C 0 1 Y N N N N N 33.927 54.270 44.911 -5.715 7.039 -1.164 C04 12F 5
12F C05 C05 C 0 1 Y N N N N N 35.077 54.104 44.149 -5.948 6.714 -2.487 C05 12F 6
12F C06 C06 C 0 1 Y N N N N N 34.978 53.684 42.826 -5.861 5.398 -2.901 C06 12F 7
12F C07 C07 C 0 1 N N N N N N 33.652 52.909 40.827 -5.437 2.974 -2.444 C07 12F 8
12F "C1'" "C1'" C 0 1 N N R N N N 21.461 38.150 31.908 9.652 1.168 -1.106 "C1'" 12F 9
12F "C2'" "C2'" C 0 1 N N R N N N 21.483 39.668 32.078 10.689 0.334 -1.900 "C2'" 12F 10
12F "O2'" "O2'" O 0 1 N N N N N N 20.740 40.274 31.017 11.575 1.184 -2.631 "O2'" 12F 11
12F "C3'" "C3'" C 0 1 N N S N N N 22.981 39.906 31.882 9.786 -0.479 -2.859 "C3'" 12F 12
12F "O3'" "O3'" O 0 1 N N N N N N 23.290 39.993 30.488 9.729 0.147 -4.142 "O3'" 12F 13
12F "C4'" "C4'" C 0 1 N N R N N N 23.605 38.642 32.484 8.401 -0.454 -2.185 "C4'" 12F 14
12F "O4'" "O4'" O 0 1 N N N N N N 22.516 37.755 32.796 8.541 0.260 -0.945 "O4'" 12F 15
12F "C5'" "C5'" C 0 1 N N N N N N 24.359 38.964 33.775 7.931 -1.884 -1.911 "C5'" 12F 16
12F "O5'" "O5'" O 0 1 N N N N N N 25.472 39.825 33.526 6.599 -1.857 -1.393 "O5'" 12F 17
12F CAL CAL C 0 1 Y N N N N N 30.912 49.423 42.226 -6.718 -1.289 -2.136 CAL 12F 18
12F CAM CAM C 0 1 Y N N N N N 31.332 50.402 41.330 -6.633 0.037 -1.756 CAM 12F 19
12F CAN CAN C 0 1 Y N N N N N 31.777 48.885 43.173 -6.964 -1.617 -3.456 CAN 12F 20
12F CAO CAO C 0 1 Y N N N N N 32.650 50.857 41.391 -6.797 1.040 -2.700 CAO 12F 21
12F CAP CAP C 0 1 Y N N N N N 33.090 49.334 43.227 -7.128 -0.621 -4.400 CAP 12F 22
12F CAQ CAQ C 0 1 Y N N N N N 33.519 50.314 42.338 -7.044 0.708 -4.026 CAQ 12F 23
12F CAR CAR C 0 1 Y N N N N N 19.602 36.487 31.835 10.979 2.652 0.458 CAR 12F 24
12F CAS CAS C 0 1 Y N N N N N 19.188 34.451 30.400 12.216 4.581 0.282 CAS 12F 25
12F CAT CAT C 0 1 Y N N N N N 17.635 35.166 32.263 12.049 3.636 2.382 CAT 12F 26
12F CAU CAU C 0 1 Y N N N N N 18.429 36.272 32.547 11.251 2.616 1.836 CAU 12F 27
12F CAV CAV C 0 1 Y N N N N N 19.389 38.034 33.323 10.007 0.899 1.378 CAV 12F 28
12F CAW CAW C 0 1 N N N N N N 28.746 42.307 36.843 0.719 -3.314 1.170 CAW 12F 29
12F CAX CAX C 0 1 N N R N N N 29.305 43.698 36.534 -0.461 -2.387 0.875 CAX 12F 30
12F CAY CAY C 0 1 N N S N N N 29.004 44.616 37.721 -1.686 -2.853 1.665 CAY 12F 31
12F CAZ CAZ C 0 1 N N S N N N 29.356 46.089 37.495 -2.874 -1.943 1.348 CAZ 12F 32
12F CBA CBA C 0 1 N N N N N N 28.876 46.857 38.728 -4.081 -2.370 2.186 CBA 12F 33
12F CBB CBB C 0 1 N N N N N N 30.308 48.898 38.838 -6.143 -1.693 1.038 CBB 12F 34
12F CBC CBC C 0 1 N N N N N N 32.689 48.638 38.359 -7.275 -3.268 -0.229 CBC 12F 35
12F CBD CBD C 0 1 N N N N N N 31.745 50.879 38.226 -8.279 -1.159 -0.084 CBD 12F 36
12F CBE CBE C 0 1 N N S N N N 30.426 50.423 38.855 -7.077 -0.600 0.626 CBE 12F 37
12F CBF CBF C 0 1 Y N N N N N 27.968 49.152 38.325 -5.281 -0.245 2.701 CBF 12F 38
12F CBG CBG C 0 1 Y N N N N N 28.117 50.532 38.264 -6.411 0.559 2.598 CBG 12F 39
12F CBH CBH C 0 1 Y N N N N N 26.719 48.579 38.099 -4.235 0.126 3.533 CBH 12F 40
12F CBI CBI C 0 1 Y N N N N N 26.989 51.312 38.030 -6.477 1.741 3.330 CBI 12F 41
12F CBJ CBJ C 0 1 Y N N N N N 25.735 50.748 37.821 -5.431 2.106 4.154 CBJ 12F 42
12F CBK CBK C 0 1 N N N N N N 24.530 51.671 37.622 -5.510 3.387 4.944 CBK 12F 43
12F CBL CBL C 0 1 N N R N N N 30.292 50.885 40.311 -6.365 0.393 -0.316 CBL 12F 44
12F CBM CBM C 0 1 N N N N N N 30.209 52.395 40.110 -6.987 1.765 0.024 CBM 12F 45
12F CBN CBN C 0 1 N N R N N N 29.145 52.392 39.010 -8.004 1.472 1.150 CBN 12F 46
12F CBO CBO C 0 1 N N N N N N 24.398 48.745 37.511 -3.175 1.704 5.161 CBO 12F 47
12F CBP CBP C 0 1 Y N N N N N 25.603 49.363 37.832 -4.311 1.301 4.257 CBP 12F 48
12F FBR FBR F 0 1 N N N N N N 34.823 50.654 42.365 -7.204 1.682 -4.948 FBR 12F 49
12F NBS NBS N 0 1 Y N N N N N 20.168 37.578 32.343 10.193 1.558 0.199 NBS 12F 50
12F NBT NBT N 0 1 Y N N N N N 19.993 35.626 30.803 11.477 3.644 -0.273 NBT 12F 51
12F NBU NBU N 0 1 Y N N N N N 17.983 34.274 31.241 12.499 4.589 1.572 NBU 12F 52
12F NBV NBV N 0 1 N N N N N N 16.539 34.953 32.986 12.350 3.653 3.732 NBV 12F 53
12F NBW NBW N 0 1 Y N N N N N 18.328 37.240 33.453 10.628 1.522 2.337 NBW 12F 54
12F NBX NBX N 0 1 N N N N N N 29.046 48.327 38.670 -5.186 -1.433 1.963 NBX 12F 55
12F NBY NBY N 0 1 N N N N N N 31.437 48.091 38.662 -6.261 -2.908 0.566 NBY 12F 56
12F NBZ NBZ N 0 1 N N N N N N 32.840 50.011 38.135 -8.300 -2.440 -0.490 NBZ 12F 57
12F NCA NCA N 0 1 N N N N N N 29.302 51.145 38.237 -7.498 0.217 1.781 NCA 12F 58
12F OCF OCF O 0 1 N N N N N N 26.692 42.012 33.904 5.519 -4.071 -2.311 OCF 12F 59
12F OCG OCG O 0 1 N N N N N N 24.440 41.567 35.005 6.579 -3.976 -0.022 OCG 12F 60
12F OCH OCH O 0 1 N N N N N N 26.477 40.373 35.772 4.378 -2.777 -0.327 OCH 12F 61
12F OCI OCI O 0 1 N N N N N N 28.400 39.347 36.985 3.194 -4.947 0.181 OCI 12F 62
12F OCJ OCJ O 0 1 N N N N N N 28.354 39.344 34.446 3.846 -3.500 2.144 OCJ 12F 63
12F OCK OCK O 0 1 N N N N N N 28.775 41.465 35.690 1.892 -2.812 0.525 OCK 12F 64
12F OCL OCL O 0 1 N N N N N N 28.697 44.201 35.340 -0.756 -2.420 -0.523 OCL 12F 65
12F OCM OCM O 0 1 N N N N N N 29.703 44.141 38.874 -1.401 -2.794 3.064 OCM 12F 66
12F OCN OCN O 0 1 N N N N N N 28.688 46.588 36.333 -3.197 -2.048 -0.041 OCN 12F 67
12F OCO OCO O 0 1 N N N N N N 33.666 47.897 38.281 -7.268 -4.377 -0.730 OCO 12F 68
12F OCP OCP O 0 1 N N N N N N 31.911 52.067 37.957 -9.238 -0.447 -0.292 OCP 12F 69
12F OCQ OCQ O 0 1 N N N N N N 29.358 53.503 38.135 -9.309 1.268 0.605 OCQ 12F 70
12F PCR PCR P 0 1 N N N N N N 25.741 41.060 34.520 5.786 -3.188 -0.992 PCR 12F 71
12F PCS PCS P 0 1 N N N N N N 28.048 40.029 35.722 3.325 -3.540 0.621 PCS 12F 72
12F H02 H02 H 0 1 N N N N N N 31.610 53.388 42.594 -5.055 3.959 0.042 H02 12F 73
12F H03 H03 H 0 1 N N N N N N 31.787 54.142 44.939 -5.212 6.303 0.779 H03 12F 74
12F H04 H04 H 0 1 N N N N N N 34.000 54.598 45.937 -5.785 8.067 -0.840 H04 12F 75
12F H05 H05 H 0 1 N N N N N N 36.046 54.301 44.583 -6.200 7.488 -3.197 H05 12F 76
12F H06 H06 H 0 1 N N N N N N 35.871 53.561 42.232 -6.043 5.143 -3.934 H06 12F 77
12F H07 H07 H 0 1 N N N N N N 33.050 53.664 40.299 -5.110 2.943 -3.484 H07 12F 78
12F H07A H07A H 0 0 N N N N N N 34.699 52.859 40.494 -4.714 2.447 -1.821 H07A 12F 79
12F "H1'" "H1'" H 0 1 N N N N N N 21.587 37.813 30.868 9.350 2.047 -1.675 "H1'" 12F 80
12F "H2'" "H2'" H 0 1 N N N N N N 21.059 40.063 33.013 11.247 -0.327 -1.236 "H2'" 12F 81
12F "HO2'" "HO2'" H 0 0 N N N N N N 20.752 41.218 31.120 12.243 0.709 -3.144 "HO2'" 12F 82
12F "H3'" "H3'" H 0 1 N N N N N N 23.342 40.838 32.342 10.151 -1.502 -2.950 "H3'" 12F 83
12F "HO3'" "HO3'" H 0 0 N N N N N N 24.222 40.141 30.378 10.585 0.212 -4.587 "HO3'" 12F 84
12F "H4'" "H4'" H 0 1 N N N N N N 24.318 38.197 31.774 7.685 0.057 -2.828 "H4'" 12F 85
12F "H5'" "H5'" H 0 1 N N N N N N 23.672 39.464 34.473 7.948 -2.457 -2.838 "H5'" 12F 86
12F "H5'A" "H5'A" H 0 0 N N N N N N 24.727 38.026 34.215 8.594 -2.352 -1.183 "H5'A" 12F 87
12F HAL HAL H 0 1 N N N N N N 29.891 49.073 42.185 -6.586 -2.070 -1.401 HAL 12F 88
12F HAN HAN H 0 1 N N N N N N 31.431 48.126 43.859 -7.029 -2.655 -3.750 HAN 12F 89
12F HAP HAP H 0 1 N N N N N N 33.774 48.924 43.955 -7.320 -0.880 -5.431 HAP 12F 90
12F HAS HAS H 0 1 N N N N N N 19.451 33.796 29.583 12.606 5.372 -0.340 HAS 12F 91
12F HAV HAV H 0 1 N N N N N N 19.587 38.912 33.920 9.429 -0.005 1.498 HAV 12F 92
12F HAW HAW H 0 1 N N N N N N 29.356 41.847 37.634 0.887 -3.357 2.246 HAW 12F 93
12F HAWA HAWA H 0 0 N N N N N N 27.704 42.410 37.181 0.498 -4.314 0.796 HAWA 12F 94
12F HAX HAX H 0 1 N N N N N N 30.393 43.651 36.376 -0.206 -1.368 1.168 HAX 12F 95
12F HAY HAY H 0 1 N N N N N N 27.913 44.580 37.860 -1.929 -3.878 1.387 HAY 12F 96
12F HAZ HAZ H 0 1 N N N N N N 30.439 46.208 37.344 -2.615 -0.911 1.583 HAZ 12F 97
12F HBA HBA H 0 1 N N N N N N 27.802 46.653 38.848 -4.391 -3.373 1.893 HBA 12F 98
12F HBAA HBAA H 0 0 N N N N N N 29.452 46.491 39.591 -3.810 -2.367 3.241 HBAA 12F 99
12F HBH HBH H 0 1 N N N N N N 26.616 47.504 38.132 -3.360 -0.502 3.615 HBH 12F 100
12F HBI HBI H 0 1 N N N N N N 27.090 52.387 38.010 -7.348 2.374 3.253 HBI 12F 101
12F HBK HBK H 0 1 N N N N N N 24.402 51.882 36.550 -5.965 3.188 5.914 HBK 12F 102
12F HBKA HBKA H 0 0 N N N N N N 23.625 51.180 38.009 -4.506 3.787 5.089 HBKA 12F 103
12F HBKB HBKB H 0 0 N N N N N N 24.697 52.614 38.164 -6.115 4.113 4.400 HBKB 12F 104
12F HBL HBL H 0 1 N N N N N N 29.428 50.431 40.818 -5.293 0.401 -0.121 HBL 12F 105
12F HBM HBM H 0 1 N N N N N N 29.908 52.945 41.014 -6.219 2.453 0.377 HBM 12F 106
12F HBMA HBMA H 0 0 N N N N N N 31.161 52.853 39.803 -7.495 2.178 -0.847 HBMA 12F 107
12F HBO HBO H 0 1 N N N N N N 23.811 48.587 38.428 -2.462 2.309 4.601 HBO 12F 108
12F HBOA HBOA H 0 0 N N N N N N 23.831 49.385 36.818 -3.564 2.283 5.999 HBOA 12F 109
12F HBOB HBOB H 0 0 N N N N N N 24.600 47.775 37.033 -2.676 0.810 5.538 HBOB 12F 110
12F HNBV HNBV H 0 0 N N N N N N 16.087 34.120 32.669 12.009 2.956 4.314 HNBV 12F 111
12F HNBA HNBA H 0 0 N N N N N N 16.790 34.850 33.949 12.902 4.363 4.097 HNBA 12F 112
12F HNBZ HNBZ H 0 0 N N N N N N 33.742 50.377 37.907 -9.068 -2.773 -0.980 HNBZ 12F 113
12F HOCL HOCL H 0 0 N N N N N N 29.043 45.064 35.147 -0.992 -3.297 -0.854 HOCL 12F 114
12F HOCM HOCM H 0 0 N N N N N N 29.518 44.709 39.613 -1.176 -1.909 3.382 HOCM 12F 115
12F HOCN HOCN H 0 0 N N N N N N 28.915 47.502 36.205 -3.510 -2.924 -0.306 HOCN 12F 116
12F HOCF HOCF H 0 0 N N N N N N 26.313 42.883 33.902 5.004 -3.617 -2.992 HOCF 12F 117
12F HOCJ HOCJ H 0 0 N N N N N N 28.761 38.505 34.626 3.955 -2.607 2.499 HOCJ 12F 118
12F HOCQ HOCQ H 0 0 N N N N N N 30.232 53.453 37.766 -9.662 2.033 0.132 HOCQ 12F 119
12F HCBN HCBN H 0 0 N N N N N N 28.140 52.462 39.451 -8.016 2.286 1.875 HCBN 12F 120
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
12F C01 C02 DOUB Y N 1
12F C01 C06 SING Y N 2
12F C01 C07 SING N N 3
12F O01 C07 SING N N 4
12F O01 CAO SING N N 5
12F C02 C03 SING Y N 6
12F C03 C04 DOUB Y N 7
12F C04 C05 SING Y N 8
12F C05 C06 DOUB Y N 9
12F "C1'" "C2'" SING N N 10
12F "C1'" "O4'" SING N N 11
12F "C1'" NBS SING N N 12
12F "C2'" "O2'" SING N N 13
12F "C2'" "C3'" SING N N 14
12F "C3'" "O3'" SING N N 15
12F "C3'" "C4'" SING N N 16
12F "C4'" "O4'" SING N N 17
12F "C4'" "C5'" SING N N 18
12F "C5'" "O5'" SING N N 19
12F "O5'" PCR SING N N 20
12F CAL CAM DOUB Y N 21
12F CAL CAN SING Y N 22
12F CAM CAO SING Y N 23
12F CAM CBL SING N N 24
12F CAN CAP DOUB Y N 25
12F CAO CAQ DOUB Y N 26
12F CAP CAQ SING Y N 27
12F CAQ FBR SING N N 28
12F CAR CAU DOUB Y N 29
12F CAR NBS SING Y N 30
12F CAR NBT SING Y N 31
12F CAS NBT DOUB Y N 32
12F CAS NBU SING Y N 33
12F CAT CAU SING Y N 34
12F CAT NBU DOUB Y N 35
12F CAT NBV SING N N 36
12F CAU NBW SING Y N 37
12F CAV NBS SING Y N 38
12F CAV NBW DOUB Y N 39
12F CAW CAX SING N N 40
12F CAW OCK SING N N 41
12F CAX CAY SING N N 42
12F CAX OCL SING N N 43
12F CAY CAZ SING N N 44
12F CAY OCM SING N N 45
12F CAZ CBA SING N N 46
12F CAZ OCN SING N N 47
12F CBA NBX SING N N 48
12F CBB CBE SING N N 49
12F CBB NBX SING N N 50
12F CBB NBY DOUB N N 51
12F CBC NBY SING N N 52
12F CBC NBZ SING N N 53
12F CBC OCO DOUB N N 54
12F CBD CBE SING N N 55
12F CBD NBZ SING N N 56
12F CBD OCP DOUB N N 57
12F CBE CBL SING N N 58
12F CBE NCA SING N N 59
12F CBF CBG DOUB Y N 60
12F CBF CBH SING Y N 61
12F CBF NBX SING N N 62
12F CBG CBI SING Y N 63
12F CBG NCA SING N N 64
12F CBH CBP DOUB Y N 65
12F CBI CBJ DOUB Y N 66
12F CBJ CBK SING N N 67
12F CBJ CBP SING Y N 68
12F CBL CBM SING N N 69
12F CBM CBN SING N N 70
12F CBN NCA SING N N 71
12F CBN OCQ SING N N 72
12F CBO CBP SING N N 73
12F OCF PCR SING N N 74
12F OCG PCR DOUB N N 75
12F OCH PCR SING N N 76
12F OCH PCS SING N N 77
12F OCI PCS DOUB N N 78
12F OCJ PCS SING N N 79
12F OCK PCS SING N N 80
12F C02 H02 SING N N 81
12F C03 H03 SING N N 82
12F C04 H04 SING N N 83
12F C05 H05 SING N N 84
12F C06 H06 SING N N 85
12F C07 H07 SING N N 86
12F C07 H07A SING N N 87
12F "C1'" "H1'" SING N N 88
12F "C2'" "H2'" SING N N 89
12F "O2'" "HO2'" SING N N 90
12F "C3'" "H3'" SING N N 91
12F "O3'" "HO3'" SING N N 92
12F "C4'" "H4'" SING N N 93
12F "C5'" "H5'" SING N N 94
12F "C5'" "H5'A" SING N N 95
12F CAL HAL SING N N 96
12F CAN HAN SING N N 97
12F CAP HAP SING N N 98
12F CAS HAS SING N N 99
12F CAV HAV SING N N 100
12F CAW HAW SING N N 101
12F CAW HAWA SING N N 102
12F CAX HAX SING N N 103
12F CAY HAY SING N N 104
12F CAZ HAZ SING N N 105
12F CBA HBA SING N N 106
12F CBA HBAA SING N N 107
12F CBH HBH SING N N 108
12F CBI HBI SING N N 109
12F CBK HBK SING N N 110
12F CBK HBKA SING N N 111
12F CBK HBKB SING N N 112
12F CBL HBL SING N N 113
12F CBM HBM SING N N 114
12F CBM HBMA SING N N 115
12F CBO HBO SING N N 116
12F CBO HBOA SING N N 117
12F CBO HBOB SING N N 118
12F NBV HNBV SING N N 119
12F NBV HNBA SING N N 120
12F NBZ HNBZ SING N N 121
12F OCL HOCL SING N N 122
12F OCM HOCM SING N N 123
12F OCN HOCN SING N N 124
12F OCF HOCF SING N N 125
12F OCJ HOCJ SING N N 126
12F OCQ HOCQ SING N N 127
12F CBN HCBN SING N N 128
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
12F SMILES_CANONICAL CACTVS 3.352 Cc1cc2N(C[C@H](O)[C@H](O)[C@H](O)CO[P](O)(=O)O[P](O)(=O)OC[C@H]3O[C@H]([C@H](O)[C@@H]3O)n4cnc5c(N)ncnc45)C6=NC(=O)NC(=O)[C@]67[C@H](C[C@@H](O)N7c2cc1C)c8cccc(F)c8OCc9ccccc9
12F SMILES CACTVS 3.352 Cc1cc2N(C[CH](O)[CH](O)[CH](O)CO[P](O)(=O)O[P](O)(=O)OC[CH]3O[CH]([CH](O)[CH]3O)n4cnc5c(N)ncnc45)C6=NC(=O)NC(=O)[C]67[CH](C[CH](O)N7c2cc1C)c8cccc(F)c8OCc9ccccc9
12F SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 Cc1cc2c(cc1C)N(C3=NC(=O)NC(=O)[C@@]34[N@@]2[C@@H](C[C@@H]4c5cccc(c5OCc6ccccc6)F)O)C[C@@H]([C@@H]([C@@H](CO[P@](=O)(O)O[P@@](=O)(O)OC[C@@H]7[C@H]([C@H]([C@@H](O7)n8cnc9c8ncnc9N)O)O)O)O)O
12F SMILES "OpenEye OEToolkits" 1.7.0 Cc1cc2c(cc1C)N3C(CC(C34C(=O)NC(=O)N=C4N2CC(C(C(COP(=O)(O)OP(=O)(O)OCC5C(C(C(O5)n6cnc7c6ncnc7N)O)O)O)O)O)c8cccc(c8OCc9ccccc9)F)O
12F InChI InChI 1.03 InChI=1S/C43H48FN9O17P2/c1-20-11-26-27(12-21(20)2)53-31(56)13-24(23-9-6-10-25(44)36(23)66-15-22-7-4-3-5-8-22)43(53)40(49-42(61)50-41(43)60)51(26)14-28(54)33(57)29(55)16-67-71(62,63)70-72(64,65)68-17-30-34(58)35(59)39(69-30)52-19-48-32-37(45)46-18-47-38(32)52/h3-12,18-19,24,28-31,33-35,39,54-59H,13-17H2,1-2H3,(H,62,63)(H,64,65)(H2,45,46,47)(H,50,60,61)/t24-,28+,29-,30-,31-,33+,34-,35-,39-,43+/m1/s1
12F InChIKey InChI 1.03 MHNGLOZRWDKFEV-BJXRDEIQSA-N
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
12F 'Create component' 2010-01-06 PDBJ
12F 'Modify aromatic_flag' 2011-06-04 RCSB
12F 'Modify descriptor' 2011-06-04 RCSB
12F 'Modify synonyms' 2021-03-13 RCSB
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id 12F
_pdbx_chem_comp_synonyms.name
"[(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL]METHYL (2R,3S,4S)-5-[(1R,3R,3AS)-1-HYDROXY-10,11-DIMETHYL-4,6-DIOXO-3-(3-FLUORO-2-BENZYLOXYPHENYL)-2,3,5,6-TETRAHYDRO-1H-BENZO[G] PYRROLO[2,1-E]PTERIDIN-8(4H)-YL]-2,3,4-TRIHYDROXYPENTYL DIHYDROGEN DIPHOSPHATE"
_pdbx_chem_comp_synonyms.provenance PDB
_pdbx_chem_comp_synonyms.type ?
#
_pdbe_chem_comp_synonyms.comp_id 12F
_pdbe_chem_comp_synonyms.name
'[(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL]METHYL (2R,3S,4S)-5-[(1R,3R,3AS)-1-HYDROXY-10,11-DIMETHYL-4,6-DIOXO-3-(3-FLUORO-2-BENZYLOXYPHENYL)-2,3,5,6-TETRAHYDRO-1H-BENZO[G] PYRROLO[2,1-E]PTERIDIN-8(4H)-YL]-2,3,4-TRIHYDROXYPENTYL DIHYDROGEN DIPHOSPHATE'
_pdbe_chem_comp_synonyms.provenance wwPDB
_pdbe_chem_comp_synonyms.type ?
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
12F C01 C 5.275 12.785 1
12F O01 O 5.185 10.442 2
12F C02 C 6.205 13.963 3
12F C03 C 5.650 15.357 4
12F C04 C 4.167 15.575 5
12F C05 C 3.236 14.397 6
12F C06 C 3.792 13.004 7
12F C07 C 5.900 11.526 8
12F "C1'" C -4.002 -13.186 9
12F "C2'" C -2.503 -13.095 10
12F "O2'" O -1.551 -14.252 11
12F "C3'" C -2.130 -11.645 12
12F "O3'" O -0.733 -11.095 13
12F "C4'" C -3.393 -10.835 14
12F "O4'" O -4.551 -11.789 15
12F "C5'" C -3.415 -9.323 16
12F "O5'" O -2.075 -8.443 17
12F CAL C 5.374 6.633 18
12F CAM C 4.870 8.126 19
12F CAN C 6.830 6.352 20
12F CAO C 5.817 9.206 21
12F CAP C 7.793 7.489 22
12F CAQ C 7.291 8.916 23
12F CAR C -4.248 -15.849 24
12F CAS C -2.592 -17.849 25
12F CAT C -5.153 -18.284 26
12F CAU C -5.408 -16.804 27
12F CAV C -6.301 -14.549 28
12F CAW C -1.210 -1.728 29
12F CAX C -1.397 -0.223 30
12F CAY C -0.229 0.645 31
12F CAZ C -0.402 2.127 32
12F CBA C 0.761 2.981 33
12F CBB C 1.845 5.277 34
12F CBC C 4.338 5.181 35
12F CBD C 2.998 7.469 36
12F CBE C 1.818 6.889 37
12F CBF C -0.665 5.111 38
12F CBG C -0.781 6.600 39
12F CBH C -1.895 4.263 40
12F CBI C -2.119 7.240 41
12F CBJ C -3.346 6.393 42
12F CBK C -4.675 7.072 43
12F CBL C 2.896 8.376 44
12F CBM C 2.011 9.525 45
12F CBN C 0.535 9.040 46
12F CBO C -4.478 4.088 47
12F CBP C -3.236 4.905 48
12F FBR F 8.190 10.028 49
12F NBS N -4.803 -14.457 50
12F NBT N -2.845 -16.371 51
12F NBU N -3.750 -18.805 52
12F NBV N -6.309 -19.242 53
12F NBW N -6.671 -16.002 54
12F NBX N 0.618 4.476 55
12F NBY N 3.101 4.502 56
12F NBZ N 4.329 6.622 57
12F NCA N 0.452 7.482 58
12F OCF O -0.836 -6.556 59
12F OCG O -3.728 -7.355 60
12F OCH O -2.928 -5.544 61
12F OCI O -3.932 -3.838 62
12F OCJ O -0.967 -4.296 63
12F OCK O -2.407 -2.548 64
12F OCL O -2.787 0.386 65
12F OCM O 1.141 0.039 66
12F OCN O -1.759 2.736 67
12F OCO O 5.643 4.448 68
12F OCP O 3.563 7.419 69
12F OCQ O -0.629 9.890 70
12F PCR P -2.311 -6.950 71
12F PCS P -2.472 -4.072 72
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
12F C01 C02 DOUBLE NONE 1
12F C01 C06 SINGLE NONE 2
12F C01 C07 SINGLE NONE 3
12F O01 C07 SINGLE NONE 4
12F O01 CAO SINGLE NONE 5
12F C02 C03 SINGLE NONE 6
12F C03 C04 DOUBLE NONE 7
12F C04 C05 SINGLE NONE 8
12F C05 C06 DOUBLE NONE 9
12F "C1'" "C2'" SINGLE NONE 10
12F "C1'" "O4'" SINGLE NONE 11
12F "C1'" NBS SINGLE BEGINDASH 12
12F "C2'" "O2'" SINGLE BEGINWEDGE 13
12F "C2'" "C3'" SINGLE NONE 14
12F "C3'" "O3'" SINGLE BEGINWEDGE 15
12F "C3'" "C4'" SINGLE NONE 16
12F "C4'" "O4'" SINGLE NONE 17
12F "C4'" "C5'" SINGLE BEGINDASH 18
12F "C5'" "O5'" SINGLE NONE 19
12F "O5'" PCR SINGLE NONE 20
12F CAL CAM DOUBLE NONE 21
12F CAL CAN SINGLE NONE 22
12F CAM CAO SINGLE NONE 23
12F CBL CAM SINGLE BEGINDASH 24
12F CAN CAP DOUBLE NONE 25
12F CAO CAQ DOUBLE NONE 26
12F CAP CAQ SINGLE NONE 27
12F CAQ FBR SINGLE NONE 28
12F CAR CAU DOUBLE NONE 29
12F CAR NBS SINGLE NONE 30
12F CAR NBT SINGLE NONE 31
12F CAS NBT DOUBLE NONE 32
12F CAS NBU SINGLE NONE 33
12F CAT CAU SINGLE NONE 34
12F CAT NBU DOUBLE NONE 35
12F CAT NBV SINGLE NONE 36
12F CAU NBW SINGLE NONE 37
12F CAV NBS SINGLE NONE 38
12F CAV NBW DOUBLE NONE 39
12F CAW CAX SINGLE NONE 40
12F CAW OCK SINGLE NONE 41
12F CAX CAY SINGLE NONE 42
12F CAX OCL SINGLE BEGINWEDGE 43
12F CAY CAZ SINGLE NONE 44
12F CAY OCM SINGLE BEGINDASH 45
12F CAZ CBA SINGLE NONE 46
12F CAZ OCN SINGLE BEGINWEDGE 47
12F CBA NBX SINGLE NONE 48
12F CBB CBE SINGLE NONE 49
12F CBB NBX SINGLE NONE 50
12F CBB NBY DOUBLE NONE 51
12F CBC NBY SINGLE NONE 52
12F CBC NBZ SINGLE NONE 53
12F CBC OCO DOUBLE NONE 54
12F CBE CBD SINGLE BEGINDASH 55
12F CBD NBZ SINGLE NONE 56
12F CBD OCP DOUBLE NONE 57
12F CBE CBL SINGLE NONE 58
12F CBE NCA SINGLE NONE 59
12F CBF CBG DOUBLE NONE 60
12F CBF CBH SINGLE NONE 61
12F CBF NBX SINGLE NONE 62
12F CBG CBI SINGLE NONE 63
12F CBG NCA SINGLE NONE 64
12F CBH CBP DOUBLE NONE 65
12F CBI CBJ DOUBLE NONE 66
12F CBJ CBK SINGLE NONE 67
12F CBJ CBP SINGLE NONE 68
12F CBL CBM SINGLE NONE 69
12F CBM CBN SINGLE NONE 70
12F CBN NCA SINGLE NONE 71
12F CBN OCQ SINGLE BEGINDASH 72
12F CBO CBP SINGLE NONE 73
12F PCR OCF SINGLE BEGINDASH 74
12F OCG PCR DOUBLE NONE 75
12F OCH PCR SINGLE NONE 76
12F OCH PCS SINGLE NONE 77
12F OCI PCS DOUBLE NONE 78
12F PCS OCJ SINGLE BEGINWEDGE 79
12F OCK PCS SINGLE NONE 80
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
12F MurckoScaffold S1 scaffold 'O=C1N=C2N(CCCCCO[PH](=O)O[PH](=O)OC[C@@H]3CC[C@H](n4cnc5cncnc54)O3)c3ccccc3N3CC[C@H](c4ccccc4OCc4ccccc4)[C@@]23C(=O)N1' InChI=1S/C41H44N8O9P2/c50-39-41-31(30-13-5-8-16-35(30)54-24-28-11-3-1-4-12-28)19-21-49(41)34-15-7-6-14-33(34)47(38(41)45-40(51)46-39)20-9-2-10-22-55-59(52)58-60(53)56-25-29-17-18-36(57-29)48-27-44-32-23-42-26-43-37(32)48/h1,3-8,11-16,23,26-27,29,31,36,59-60H,2,9-10,17-22,24-25H2,(H,46,50,51)/t29-,31+,36+,41-/m0/s1 DAFZCRUBTKARIG-WVJUSFRASA-N
12F adenine F1 fragment 'Nc1ncnc2nc[nH]c12' InChI=1S/C5H5N5/c6-4-3-5(9-1-7-3)10-2-8-4/h1-2H,(H3,6,7,8,9,10) GFFGJBXGBJISGV-UHFFFAOYSA-N
12F amide F2 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
12F imidazole F3 fragment 'c1c[nH]cn1' InChI=1S/C3H4N2/c1-2-5-3-4-1/h1-3H,(H,4,5) RAXXELZNTBOGNW-UHFFFAOYSA-N
12F peptide F4 fragment NCC=O InChI=1S/C2H5NO/c3-1-2-4/h2H,1,3H2 LYIIBVSRGJSHAV-UHFFFAOYSA-N
12F phenyl F5 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
12F phosphate F6 fragment O=P(O)(O)O InChI=1S/H3O4P/c1-5(2,3)4/h(H3,1,2,3,4) NBIIXXVUZAFLBC-UHFFFAOYSA-N
12F purine F7 fragment 'c1ncc2[nH]cnc2n1' InChI=1S/C5H4N4/c1-4-5(8-2-6-1)9-3-7-4/h1-3H,(H,6,7,8,9) KDCGOANMDULRCW-UHFFFAOYSA-N
12F pyrimidine F8 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N
12F ribose F9 fragment OCC1OCC(O)C1O InChI=1S/C5H10O4/c6-1-4-5(8)3(7)2-9-4/h3-8H,1-2H2 KZVAAIRBJJYZOW-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
12F C01 S1 1
12F O01 S1 1
12F C02 S1 1
12F C03 S1 1
12F C04 S1 1
12F C05 S1 1
12F C06 S1 1
12F C07 S1 1
12F "C1'" S1 1
12F "C2'" S1 1
12F "C3'" S1 1
12F "C4'" S1 1
12F "O4'" S1 1
12F "C5'" S1 1
12F "O5'" S1 1
12F CAL S1 1
12F CAM S1 1
12F CAN S1 1
12F CAO S1 1
12F CAP S1 1
12F CAQ S1 1
12F CAR S1 1
12F CAS S1 1
12F CAT S1 1
12F CAU S1 1
12F CAV S1 1
12F CAW S1 1
12F CAX S1 1
12F CAY S1 1
12F CAZ S1 1
12F CBA S1 1
12F CBB S1 1
12F CBC S1 1
12F CBD S1 1
12F CBE S1 1
12F CBF S1 1
12F CBG S1 1
12F CBH S1 1
12F CBI S1 1
12F CBJ S1 1
12F CBL S1 1
12F CBM S1 1
12F CBN S1 1
12F CBP S1 1
12F NBS S1 1
12F NBT S1 1
12F NBU S1 1
12F NBW S1 1
12F NBX S1 1
12F NBY S1 1
12F NBZ S1 1
12F NCA S1 1
12F OCG S1 1
12F OCH S1 1
12F OCI S1 1
12F OCK S1 1
12F OCO S1 1
12F OCP S1 1
12F PCR S1 1
12F PCS S1 1
12F NBU F1 1
12F CAT F1 1
12F CAU F1 1
12F CAR F1 1
12F NBT F1 1
12F CAS F1 1
12F NBS F1 1
12F CAV F1 1
12F NBW F1 1
12F NBV F1 1
12F NBZ F2 1
12F CBD F2 1
12F OCP F2 1
12F CBE F2 1
12F CAR F3 1
12F CAU F3 1
12F NBW F3 1
12F CAV F3 1
12F NBS F3 1
12F OCP F4 1
12F CBD F4 1
12F CBE F4 1
12F NCA F4 1
12F C01 F5 1
12F C02 F5 1
12F C03 F5 1
12F C04 F5 1
12F C05 F5 1
12F C06 F5 1
12F CAL F5 2
12F CAM F5 2
12F CAO F5 2
12F CAQ F5 2
12F CAP F5 2
12F CAN F5 2
12F CBF F5 3
12F CBG F5 3
12F CBI F5 3
12F CBJ F5 3
12F CBP F5 3
12F CBH F5 3
12F "O5'" F6 1
12F PCR F6 1
12F OCG F6 1
12F OCF F6 1
12F OCH F6 1
12F OCH F6 2
12F PCS F6 2
12F OCI F6 2
12F OCJ F6 2
12F OCK F6 2
12F NBW F7 1
12F CAV F7 1
12F NBS F7 1
12F CAR F7 1
12F CAU F7 1
12F CAT F7 1
12F NBU F7 1
12F CAS F7 1
12F NBT F7 1
12F CAU F8 1
12F CAR F8 1
12F NBT F8 1
12F CAS F8 1
12F NBU F8 1
12F CAT F8 1
12F "C2'" F9 1
12F "C3'" F9 1
12F "C4'" F9 1
12F "O4'" F9 1
12F "C1'" F9 1
12F "C5'" F9 1
12F "O5'" F9 1
12F "O3'" F9 1
12F "O2'" F9 1
#
_pdbe_chem_comp_rdkit_properties.comp_id 12F
_pdbe_chem_comp_rdkit_properties.exactmw 1043.263
_pdbe_chem_comp_rdkit_properties.amw 1043.849
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 26
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 11
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 28
_pdbe_chem_comp_rdkit_properties.NumHBD 10
_pdbe_chem_comp_rdkit_properties.NumHBA 24
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 72
_pdbe_chem_comp_rdkit_properties.NumAtoms 120
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 29
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 3
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.395
_pdbe_chem_comp_rdkit_properties.NumRings 9
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 5
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 4
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 2
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 6
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 4
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 1
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 12
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 474.758
_pdbe_chem_comp_rdkit_properties.tpsa 376.760
_pdbe_chem_comp_rdkit_properties.CrippenClogP -1.336
_pdbe_chem_comp_rdkit_properties.CrippenMR 239.951
_pdbe_chem_comp_rdkit_properties.chi0v 35.526
_pdbe_chem_comp_rdkit_properties.chi1v 21.151
_pdbe_chem_comp_rdkit_properties.chi2v 11.349
_pdbe_chem_comp_rdkit_properties.chi3v 11.349
_pdbe_chem_comp_rdkit_properties.chi4v 7.944
_pdbe_chem_comp_rdkit_properties.chi0n 81.738
_pdbe_chem_comp_rdkit_properties.chi1n 41.337
_pdbe_chem_comp_rdkit_properties.chi2n 9.119
_pdbe_chem_comp_rdkit_properties.chi3n 9.119
_pdbe_chem_comp_rdkit_properties.chi4n 6.308
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -5.870
_pdbe_chem_comp_rdkit_properties.kappa1 18.807
_pdbe_chem_comp_rdkit_properties.kappa2 19.524
_pdbe_chem_comp_rdkit_properties.kappa3 9.261
_pdbe_chem_comp_rdkit_properties.Phi 5.100
#
_pdbe_chem_comp_external_mappings.comp_id 12F
_pdbe_chem_comp_external_mappings.source UniChem
_pdbe_chem_comp_external_mappings.resource PubChem
_pdbe_chem_comp_external_mappings.resource_id 46224505
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
12F C01 -1.171 5.658 -1.698 ETKDGv3 1
12F O01 -1.632 3.644 -2.953 ETKDGv3 2
12F C02 -1.894 5.757 -0.567 ETKDGv3 3
12F C03 -1.274 6.269 0.672 ETKDGv3 4
12F C04 0.011 6.640 0.676 ETKDGv3 5
12F C05 0.812 6.539 -0.561 ETKDGv3 6
12F C06 0.255 6.071 -1.685 ETKDGv3 7
12F C07 -1.772 5.068 -2.947 ETKDGv3 8
12F "C1'" 4.068 1.681 0.189 ETKDGv3 9
12F "C2'" 5.102 1.969 1.265 ETKDGv3 10
12F "O2'" 5.579 3.288 1.190 ETKDGv3 11
12F "C3'" 6.183 0.959 0.949 ETKDGv3 12
12F "O3'" 7.205 1.505 0.146 ETKDGv3 13
12F "C4'" 5.418 -0.150 0.200 ETKDGv3 14
12F "O4'" 4.114 0.306 -0.107 ETKDGv3 15
12F "C5'" 5.322 -1.447 1.014 ETKDGv3 16
12F "O5'" 4.757 -1.179 2.278 ETKDGv3 17
12F CAL 0.975 1.194 -1.917 ETKDGv3 18
12F CAM -0.219 1.821 -1.936 ETKDGv3 19
12F CAN 2.071 1.598 -2.811 ETKDGv3 20
12F CAO -0.409 2.959 -2.905 ETKDGv3 21
12F CAP 1.890 2.590 -3.680 ETKDGv3 22
12F CAQ 0.597 3.291 -3.743 ETKDGv3 23
12F CAR 1.868 1.386 1.530 ETKDGv3 24
12F CAS 1.011 -0.423 2.769 ETKDGv3 25
12F CAT -0.109 1.703 2.847 ETKDGv3 26
12F CAU 0.925 2.193 1.928 ETKDGv3 27
12F CAV 2.150 3.370 0.610 ETKDGv3 28
12F CAW 1.224 -5.747 0.794 ETKDGv3 29
12F CAX 0.086 -5.650 -0.247 ETKDGv3 30
12F CAY 0.240 -4.438 -1.216 ETKDGv3 31
12F CAZ 0.410 -3.040 -0.552 ETKDGv3 32
12F CBA -0.853 -2.444 0.114 ETKDGv3 33
12F CBB -1.719 -1.106 -1.851 ETKDGv3 34
12F CBC -1.212 -0.679 -4.152 ETKDGv3 35
12F CBD -2.804 0.808 -3.030 ETKDGv3 36
12F CBE -2.323 0.289 -1.688 ETKDGv3 37
12F CBF -3.292 -2.105 -0.307 ETKDGv3 38
12F CBG -4.026 -0.975 -0.284 ETKDGv3 39
12F CBH -3.878 -3.368 0.196 ETKDGv3 40
12F CBI -5.395 -0.996 0.278 ETKDGv3 41
12F CBJ -5.923 -2.135 0.760 ETKDGv3 42
12F CBK -7.322 -2.137 1.316 ETKDGv3 43
12F CBL -1.324 1.261 -1.029 ETKDGv3 44
12F CBM -2.210 2.262 -0.284 ETKDGv3 45
12F CBN -3.429 1.434 0.140 ETKDGv3 46
12F CBO -5.699 -4.693 1.206 ETKDGv3 47
12F CBP -5.128 -3.398 0.693 ETKDGv3 48
12F FBR 0.434 4.234 -4.703 ETKDGv3 49
12F NBS 2.726 2.057 0.627 ETKDGv3 50
12F NBT 1.930 0.018 1.950 ETKDGv3 51
12F NBU -0.047 0.456 3.230 ETKDGv3 52
12F NBV -1.155 2.555 3.313 ETKDGv3 53
12F NBW 1.085 3.484 1.351 ETKDGv3 54
12F NBX -1.941 -2.067 -0.808 ETKDGv3 55
12F NBY -1.196 -1.495 -2.978 ETKDGv3 56
12F NBZ -2.092 0.442 -4.212 ETKDGv3 57
12F NCA -3.438 0.261 -0.733 ETKDGv3 58
12F OCF 5.493 -3.783 2.937 ETKDGv3 59
12F OCG 3.831 -2.376 4.398 ETKDGv3 60
12F OCH 2.911 -3.203 2.058 ETKDGv3 61
12F OCI 3.290 -5.713 2.806 ETKDGv3 62
12F OCJ 1.832 -4.244 4.413 ETKDGv3 63
12F OCK 0.867 -5.042 1.965 ETKDGv3 64
12F OCL -1.164 -5.631 0.391 ETKDGv3 65
12F OCM -0.768 -4.426 -2.196 ETKDGv3 66
12F OCN 0.950 -2.133 -1.475 ETKDGv3 67
12F OCO -0.511 -0.992 -5.149 ETKDGv3 68
12F OCP -3.773 1.611 -3.105 ETKDGv3 69
12F OCQ -4.616 2.162 -0.026 ETKDGv3 70
12F PCR 4.237 -2.647 2.967 ETKDGv3 71
12F PCS 2.276 -4.588 2.816 ETKDGv3 72
12F H02 -2.933 5.454 -0.546 ETKDGv3 73
12F H03 -1.862 6.337 1.579 ETKDGv3 74
12F H04 0.468 7.011 1.584 ETKDGv3 75
12F H05 1.852 6.838 -0.554 ETKDGv3 76
12F H06 0.852 5.997 -2.585 ETKDGv3 77
12F H07 -2.854 5.312 -2.993 ETKDGv3 78
12F H07A -1.318 5.523 -3.850 ETKDGv3 79
12F "H1'" 4.314 2.248 -0.738 ETKDGv3 80
12F "H2'" 4.687 1.755 2.279 ETKDGv3 81
12F "HO2'" 4.885 3.862 1.605 ETKDGv3 82
12F "H3'" 6.646 0.591 1.891 ETKDGv3 83
12F "HO3'" 6.797 1.837 -0.696 ETKDGv3 84
12F "H4'" 5.935 -0.394 -0.755 ETKDGv3 85
12F "H5'" 4.709 -2.164 0.419 ETKDGv3 86
12F "H5'A" 6.343 -1.869 1.142 ETKDGv3 87
12F HAL 1.159 0.372 -1.239 ETKDGv3 88
12F HAN 3.019 1.078 -2.769 ETKDGv3 89
12F HAP 2.693 2.877 -4.347 ETKDGv3 90
12F HAS 1.033 -1.452 3.099 ETKDGv3 91
12F HAV 2.561 4.194 0.043 ETKDGv3 92
12F HAW 1.368 -6.817 1.061 ETKDGv3 93
12F HAWA 2.170 -5.383 0.328 ETKDGv3 94
12F HAX 0.144 -6.562 -0.887 ETKDGv3 95
12F HAY 1.190 -4.630 -1.763 ETKDGv3 96
12F HAZ 1.146 -3.142 0.270 ETKDGv3 97
12F HBA -1.221 -3.161 0.877 ETKDGv3 98
12F HBAA -0.552 -1.538 0.680 ETKDGv3 99
12F HBH -3.293 -4.273 0.142 ETKDGv3 100
12F HBI -5.969 -0.078 0.294 ETKDGv3 101
12F HBK -8.000 -2.660 0.610 ETKDGv3 102
12F HBKA -7.341 -2.658 2.295 ETKDGv3 103
12F HBKB -7.705 -1.106 1.476 ETKDGv3 104
12F HBL -0.824 0.698 -0.205 ETKDGv3 105
12F HBM -2.561 3.075 -0.936 ETKDGv3 106
12F HBMA -1.689 2.705 0.588 ETKDGv3 107
12F HBO -5.773 -4.653 2.312 ETKDGv3 108
12F HBOA -6.709 -4.858 0.777 ETKDGv3 109
12F HBOB -5.067 -5.565 0.927 ETKDGv3 110
12F HNBV -1.203 3.553 3.011 ETKDGv3 111
12F HNBA -1.890 2.185 3.956 ETKDGv3 112
12F HNBZ -2.250 0.950 -5.111 ETKDGv3 113
12F HOCL -1.316 -6.542 0.756 ETKDGv3 114
12F HOCM -1.645 -4.469 -1.738 ETKDGv3 115
12F HOCN 1.916 -2.343 -1.571 ETKDGv3 116
12F HOCF 6.231 -3.356 3.441 ETKDGv3 117
12F HOCJ 1.387 -5.068 4.734 ETKDGv3 118
12F HOCQ -4.637 2.834 0.706 ETKDGv3 119
12F HCBN -3.310 1.110 1.201 ETKDGv3 120
#