HEADER RNA BINDING PROTEIN 22-JAN-24 8Y03 TITLE CRYSTAL STRUCTURE OF LBCAS12A-CRRNA COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: LBCAS12A; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: RNA (41-MER); COMPND 7 CHAIN: G; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LACHNOSPIRACEAE BACTERIUM ND2006; SOURCE 3 ORGANISM_TAXID: 1410628; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: LACHNOSPIRACEAE BACTERIUM ND2006; SOURCE 8 ORGANISM_TAXID: 1410628; SOURCE 9 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS CRISPR, CAS12A, CRRNA, COMPLEX, RNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR X.LIN,J.CHEN,L.LIU REVDAT 1 01-JAN-25 8Y03 0 JRNL AUTH J.CHEN,X.LIN,W.XIANG,Y.CHEN,Y.ZHAO,L.HUANG,L.LIU JRNL TITL DNA TARGET BINDING-INDUCED PRE-CRRNA PROCESSING IN TYPE II JRNL TITL 2 AND V CRISPR-CAS SYSTEMS. JRNL REF NUCLEIC ACIDS RES. 2024 JRNL REFN ESSN 1362-4962 JRNL PMID 39676682 JRNL DOI 10.1093/NAR/GKAE1241 REMARK 2 REMARK 2 RESOLUTION. 2.93 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.93 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.66 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 35340 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.270 REMARK 3 R VALUE (WORKING SET) : 0.269 REMARK 3 FREE R VALUE : 0.289 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.910 REMARK 3 FREE R VALUE TEST SET COUNT : 1734 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.6600 - 6.7000 1.00 2915 143 0.2195 0.2273 REMARK 3 2 6.7000 - 5.3200 1.00 2875 138 0.2608 0.2483 REMARK 3 3 5.3200 - 4.6500 1.00 2824 162 0.2393 0.2681 REMARK 3 4 4.6500 - 4.2200 1.00 2851 133 0.2408 0.2420 REMARK 3 5 4.2200 - 3.9200 1.00 2824 138 0.2623 0.2552 REMARK 3 6 3.9200 - 3.6900 1.00 2846 141 0.2758 0.2876 REMARK 3 7 3.6900 - 3.5100 1.00 2807 140 0.3006 0.3323 REMARK 3 8 3.5100 - 3.3500 1.00 2793 151 0.3026 0.3754 REMARK 3 9 3.3500 - 3.2200 1.00 2818 151 0.3214 0.3196 REMARK 3 10 3.2200 - 3.1100 1.00 2787 165 0.3099 0.3612 REMARK 3 11 3.1100 - 3.0200 0.99 2796 146 0.3182 0.3734 REMARK 3 12 3.0200 - 2.9300 0.88 2470 126 0.3569 0.3798 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.419 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.551 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 47.05 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 56.52 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 11072 REMARK 3 ANGLE : 1.447 15077 REMARK 3 CHIRALITY : 0.206 1645 REMARK 3 PLANARITY : 0.006 1777 REMARK 3 DIHEDRAL : 22.347 4308 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8Y03 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 22-JAN-24. REMARK 100 THE DEPOSITION ID IS D_1300042240. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-AUG-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL18U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97915 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 7.21 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 7.21 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35712 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.930 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.93 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.98 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.40 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.250 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX 1.17.1_3660 REMARK 200 STARTING MODEL: 5ID6 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.72 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.72 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS, PH 7.9, 15% PEG 4000, 0.1 REMARK 280 M MAGNESIUM CHLORIDE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 84.12950 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.61050 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 84.12950 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 41.61050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7590 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 62020 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -71.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 133 REMARK 465 ASP A 134 REMARK 465 LEU A 281 REMARK 465 SER A 282 REMARK 465 ASP A 283 REMARK 465 ARG A 284 REMARK 465 GLU A 285 REMARK 465 SER A 286 REMARK 465 LEU A 287 REMARK 465 SER A 288 REMARK 465 PHE A 289 REMARK 465 TYR A 290 REMARK 465 GLY A 291 REMARK 465 LYS A 1079 REMARK 465 LYS A 1080 REMARK 465 ASN A 1081 REMARK 465 ASN A 1082 REMARK 465 VAL A 1083 REMARK 465 PHE A 1084 REMARK 465 HIS A 1228 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 1 CG SD CE REMARK 470 ASN A 112 CG OD1 ND2 REMARK 470 GLU A 113 CG CD OE1 OE2 REMARK 470 PHE A 131 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LEU A 132 CG CD1 CD2 REMARK 470 GLN A 264 CG CD OE1 NE2 REMARK 470 LYS A 269 CG CD CE NZ REMARK 470 LYS A 478 CG CD CE NZ REMARK 470 TYR A 583 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS A 584 CG CD CE NZ REMARK 470 GLN A 941 CG CD OE1 NE2 REMARK 470 ARG A1076 CG CD NE CZ NH1 NH2 REMARK 470 ASN A1077 CG OD1 ND2 REMARK 470 PRO A1078 CG CD REMARK 470 ASP A1085 CG OD1 OD2 REMARK 470 PHE A1161 CG CD1 CD2 CE1 CE2 CZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ASP A 535 O TYR A 583 1.51 REMARK 500 OD1 ASP A 1005 OG SER A 1007 1.85 REMARK 500 OD1 ASN A 732 CD2 LEU A 971 1.87 REMARK 500 O GLU A 201 NZ LYS A 206 1.88 REMARK 500 O LYS A 199 NE2 GLN A 203 1.88 REMARK 500 O ASP A 1058 NZ LYS A 1061 1.90 REMARK 500 OH TYR A 663 OE1 GLU A 672 1.93 REMARK 500 NH1 ARG A 1138 OD2 ASP A 1148 1.95 REMARK 500 ND2 ASN A 628 OD2 ASP A 631 1.99 REMARK 500 CB GLN A 941 N4 C G 29 2.03 REMARK 500 OD2 ASP A 1110 NH2 ARG A 1112 2.05 REMARK 500 O GLU A 207 N SER A 212 2.05 REMARK 500 O MET A 603 O TYR A 606 2.07 REMARK 500 C ASP A 535 O TYR A 583 2.10 REMARK 500 OD2 ASP A 1005 OG SER A 1152 2.14 REMARK 500 CD1 ILE A 1111 CD2 LEU A 1115 2.14 REMARK 500 CE LYS A 447 O VAL A 511 2.15 REMARK 500 O LEU A 566 NZ LYS A 580 2.15 REMARK 500 CG PHE A 337 OE1 GLU A 479 2.16 REMARK 500 OD2 ASP A 1058 O ILE A 1060 2.16 REMARK 500 ND2 ASN A 577 O ALA A 685 2.17 REMARK 500 ND2 ASN A 577 C ALA A 685 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 VAL A 202 CB - CA - C ANGL. DEV. = -12.1 DEGREES REMARK 500 VAL A 202 N - CA - C ANGL. DEV. = 17.8 DEGREES REMARK 500 LYS A 267 N - CA - C ANGL. DEV. = -21.5 DEGREES REMARK 500 PRO A1078 N - CA - CB ANGL. DEV. = 7.3 DEGREES REMARK 500 U G 9 C5 - C6 - N1 ANGL. DEV. = -3.0 DEGREES REMARK 500 A G 14 C2 - N3 - C4 ANGL. DEV. = -4.0 DEGREES REMARK 500 A G 14 C5 - N7 - C8 ANGL. DEV. = -3.1 DEGREES REMARK 500 A G 14 N1 - C6 - N6 ANGL. DEV. = 4.2 DEGREES REMARK 500 G G 15 N1 - C6 - O6 ANGL. DEV. = -4.3 DEGREES REMARK 500 G G 20 O5' - P - OP1 ANGL. DEV. = -5.6 DEGREES REMARK 500 G G 20 C8 - N9 - C4 ANGL. DEV. = -2.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 85 -122.20 59.30 REMARK 500 ARG A 86 7.36 94.91 REMARK 500 THR A 87 -133.21 40.09 REMARK 500 GLU A 165 -5.35 -53.38 REMARK 500 ASN A 211 -68.95 -149.78 REMARK 500 SER A 212 -9.60 85.07 REMARK 500 TYR A 214 -170.72 50.44 REMARK 500 THR A 246 6.31 83.31 REMARK 500 SER A 248 -169.51 170.41 REMARK 500 GLN A 268 -133.31 41.24 REMARK 500 ASP A 407 6.08 82.78 REMARK 500 ASN A 575 -70.81 -139.92 REMARK 500 ASN A 864 -132.69 56.89 REMARK 500 THR A 988 -127.14 61.25 REMARK 500 THR A1142 -4.02 80.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 615 REMARK 615 ZERO OCCUPANCY ATOM REMARK 615 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 615 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 615 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 615 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 615 M RES C SSEQI REMARK 615 MG A 1301 REMARK 615 MG G 101 DBREF1 8Y03 A 1 1228 UNP A0A5S8WF58_9FIRM DBREF2 8Y03 A A0A5S8WF58 1 1228 DBREF 8Y03 G 3 42 PDB 8Y03 8Y03 3 42 SEQRES 1 A 1228 MET SER LYS LEU GLU LYS PHE THR ASN CYS TYR SER LEU SEQRES 2 A 1228 SER LYS THR LEU ARG PHE LYS ALA ILE PRO VAL GLY LYS SEQRES 3 A 1228 THR GLN GLU ASN ILE ASP ASN LYS ARG LEU LEU VAL GLU SEQRES 4 A 1228 ASP GLU LYS ARG ALA GLU ASP TYR LYS GLY VAL LYS LYS SEQRES 5 A 1228 LEU LEU ASP ARG TYR TYR LEU SER PHE ILE ASN ASP VAL SEQRES 6 A 1228 LEU HIS SER ILE LYS LEU LYS ASN LEU ASN ASN TYR ILE SEQRES 7 A 1228 SER LEU PHE ARG LYS LYS THR ARG THR GLU LYS GLU ASN SEQRES 8 A 1228 LYS GLU LEU GLU ASN LEU GLU ILE ASN LEU ARG LYS GLU SEQRES 9 A 1228 ILE ALA LYS ALA PHE LYS GLY ASN GLU GLY TYR LYS SER SEQRES 10 A 1228 LEU PHE LYS LYS ASP ILE ILE GLU THR ILE LEU PRO GLU SEQRES 11 A 1228 PHE LEU ASP ASP LYS ASP GLU ILE ALA LEU VAL ASN SER SEQRES 12 A 1228 PHE ASN GLY PHE THR THR ALA PHE THR GLY PHE PHE ASP SEQRES 13 A 1228 ASN ARG GLU ASN MET PHE SER GLU GLU ALA LYS SER THR SEQRES 14 A 1228 SER ILE ALA PHE ARG CYS ILE ASN GLU ASN LEU THR ARG SEQRES 15 A 1228 TYR ILE SER ASN MET ASP ILE PHE GLU LYS VAL ASP ALA SEQRES 16 A 1228 ILE PHE ASP LYS HIS GLU VAL GLN GLU ILE LYS GLU LYS SEQRES 17 A 1228 ILE LEU ASN SER ASP TYR ASP VAL GLU ASP PHE PHE GLU SEQRES 18 A 1228 GLY GLU PHE PHE ASN PHE VAL LEU THR GLN GLU GLY ILE SEQRES 19 A 1228 ASP VAL TYR ASN ALA ILE ILE GLY GLY PHE VAL THR GLU SEQRES 20 A 1228 SER GLY GLU LYS ILE LYS GLY LEU ASN GLU TYR ILE ASN SEQRES 21 A 1228 LEU TYR ASN GLN LYS THR LYS GLN LYS LEU PRO LYS PHE SEQRES 22 A 1228 LYS PRO LEU TYR LYS GLN VAL LEU SER ASP ARG GLU SER SEQRES 23 A 1228 LEU SER PHE TYR GLY GLU GLY TYR THR SER ASP GLU GLU SEQRES 24 A 1228 VAL LEU GLU VAL PHE ARG ASN THR LEU ASN LYS ASN SER SEQRES 25 A 1228 GLU ILE PHE SER SER ILE LYS LYS LEU GLU LYS LEU PHE SEQRES 26 A 1228 LYS ASN PHE ASP GLU TYR SER SER ALA GLY ILE PHE VAL SEQRES 27 A 1228 LYS ASN GLY PRO ALA ILE SER THR ILE SER LYS ASP ILE SEQRES 28 A 1228 PHE GLY GLU TRP ASN VAL ILE ARG ASP LYS TRP ASN ALA SEQRES 29 A 1228 GLU TYR ASP ASP ILE HIS LEU LYS LYS LYS ALA VAL VAL SEQRES 30 A 1228 THR GLU LYS TYR GLU ASP ASP ARG ARG LYS SER PHE LYS SEQRES 31 A 1228 LYS ILE GLY SER PHE SER LEU GLU GLN LEU GLN GLU TYR SEQRES 32 A 1228 ALA ASP ALA ASP LEU SER VAL VAL GLU LYS LEU LYS GLU SEQRES 33 A 1228 ILE ILE ILE GLN LYS VAL ASP GLU ILE TYR LYS VAL TYR SEQRES 34 A 1228 GLY SER SER GLU LYS LEU PHE ASP ALA ASP PHE VAL LEU SEQRES 35 A 1228 GLU LYS SER LEU LYS LYS ASN ASP ALA VAL VAL ALA ILE SEQRES 36 A 1228 MET LYS ASP LEU LEU ASP SER VAL LYS SER PHE GLU ASN SEQRES 37 A 1228 TYR ILE LYS ALA PHE PHE GLY GLU GLY LYS GLU THR ASN SEQRES 38 A 1228 ARG ASP GLU SER PHE TYR GLY ASP PHE VAL LEU ALA TYR SEQRES 39 A 1228 ASP ILE LEU LEU LYS VAL ASP HIS ILE TYR ASP ALA ILE SEQRES 40 A 1228 ARG ASN TYR VAL THR GLN LYS PRO TYR SER LYS ASP LYS SEQRES 41 A 1228 PHE LYS LEU TYR PHE GLN ASN PRO GLN PHE MET GLY GLY SEQRES 42 A 1228 TRP ASP LYS ASP LYS GLU THR ASP TYR ARG ALA THR ILE SEQRES 43 A 1228 LEU ARG TYR GLY SER LYS TYR TYR LEU ALA ILE MET ASP SEQRES 44 A 1228 LYS LYS TYR ALA LYS CYS LEU GLN LYS ILE ASP LYS ASP SEQRES 45 A 1228 ASP VAL ASN GLY ASN TYR GLU LYS ILE ASN TYR LYS LEU SEQRES 46 A 1228 LEU PRO GLY PRO ASN LYS MET LEU PRO LYS VAL PHE PHE SEQRES 47 A 1228 SER LYS LYS TRP MET ALA TYR TYR ASN PRO SER GLU ASP SEQRES 48 A 1228 ILE GLN LYS ILE TYR LYS ASN GLY THR PHE LYS LYS GLY SEQRES 49 A 1228 ASP MET PHE ASN LEU ASN ASP CYS HIS LYS LEU ILE ASP SEQRES 50 A 1228 PHE PHE LYS ASP SER ILE SER ARG TYR PRO LYS TRP SER SEQRES 51 A 1228 ASN ALA TYR ASP PHE ASN PHE SER GLU THR GLU LYS TYR SEQRES 52 A 1228 LYS ASP ILE ALA GLY PHE TYR ARG GLU VAL GLU GLU GLN SEQRES 53 A 1228 GLY TYR LYS VAL SER PHE GLU SER ALA SER LYS LYS GLU SEQRES 54 A 1228 VAL ASP LYS LEU VAL GLU GLU GLY LYS LEU TYR MET PHE SEQRES 55 A 1228 GLN ILE TYR ASN LYS ASP PHE SER ASP LYS SER HIS GLY SEQRES 56 A 1228 THR PRO ASN LEU HIS THR MET TYR PHE LYS LEU LEU PHE SEQRES 57 A 1228 ASP GLU ASN ASN HIS GLY GLN ILE ARG LEU SER GLY GLY SEQRES 58 A 1228 ALA GLU LEU PHE MET ARG ARG ALA SER LEU LYS LYS GLU SEQRES 59 A 1228 GLU LEU VAL VAL HIS PRO ALA ASN SER PRO ILE ALA ASN SEQRES 60 A 1228 LYS ASN PRO ASP ASN PRO LYS LYS THR THR THR LEU SER SEQRES 61 A 1228 TYR ASP VAL TYR LYS ASP LYS ARG PHE SER GLU ASP GLN SEQRES 62 A 1228 TYR GLU LEU HIS ILE PRO ILE ALA ILE ASN LYS CYS PRO SEQRES 63 A 1228 LYS ASN ILE PHE LYS ILE ASN THR GLU VAL ARG VAL LEU SEQRES 64 A 1228 LEU LYS HIS ASP ASP ASN PRO TYR VAL ILE GLY ILE ASP SEQRES 65 A 1228 ARG GLY GLU ARG ASN LEU LEU TYR ILE VAL VAL VAL ASP SEQRES 66 A 1228 GLY LYS GLY ASN ILE VAL GLU GLN TYR SER LEU ASN GLU SEQRES 67 A 1228 ILE ILE ASN ASN PHE ASN GLY ILE ARG ILE LYS THR ASP SEQRES 68 A 1228 TYR HIS SER LEU LEU ASP LYS LYS GLU LYS GLU ARG PHE SEQRES 69 A 1228 GLU ALA ARG GLN ASN TRP THR SER ILE GLU ASN ILE LYS SEQRES 70 A 1228 GLU LEU LYS ALA GLY TYR ILE SER GLN VAL VAL HIS LYS SEQRES 71 A 1228 ILE CYS GLU LEU VAL GLU LYS TYR ASP ALA VAL ILE ALA SEQRES 72 A 1228 LEU GLU ASP LEU ASN SER GLY PHE LYS ASN SER ARG VAL SEQRES 73 A 1228 LYS VAL GLU LYS GLN VAL TYR GLN LYS PHE GLU LYS MET SEQRES 74 A 1228 LEU ILE ASP LYS LEU ASN TYR MET VAL ASP LYS LYS SER SEQRES 75 A 1228 ASN PRO CYS ALA THR GLY GLY ALA LEU LYS GLY TYR GLN SEQRES 76 A 1228 ILE THR ASN LYS PHE GLU SER PHE LYS SER MET SER THR SEQRES 77 A 1228 GLN ASN GLY PHE ILE PHE TYR ILE PRO ALA TRP LEU THR SEQRES 78 A 1228 SER LYS ILE ASP PRO SER THR GLY PHE VAL ASN LEU LEU SEQRES 79 A 1228 LYS THR LYS TYR THR SER ILE ALA ASP SER LYS LYS PHE SEQRES 80 A 1228 ILE SER SER PHE ASP ARG ILE MET TYR VAL PRO GLU GLU SEQRES 81 A 1228 ASP LEU PHE GLU PHE ALA LEU ASP TYR LYS ASN PHE SER SEQRES 82 A 1228 ARG THR ASP ALA ASP TYR ILE LYS LYS TRP LYS LEU TYR SEQRES 83 A 1228 SER TYR GLY ASN ARG ILE ARG ILE PHE ARG ASN PRO LYS SEQRES 84 A 1228 LYS ASN ASN VAL PHE ASP TRP GLU GLU VAL CYS LEU THR SEQRES 85 A 1228 SER ALA TYR LYS GLU LEU PHE ASN LYS TYR GLY ILE ASN SEQRES 86 A 1228 TYR GLN GLN GLY ASP ILE ARG ALA LEU LEU CYS GLU GLN SEQRES 87 A 1228 SER ASP LYS ALA PHE TYR SER SER PHE MET ALA LEU MET SEQRES 88 A 1228 SER LEU MET LEU GLN MET ARG ASN SER ILE THR GLY ARG SEQRES 89 A 1228 THR ASP VAL ASP PHE LEU ILE SER PRO VAL LYS ASN SER SEQRES 90 A 1228 ASP GLY ILE PHE TYR ASP SER ARG ASN TYR GLU ALA GLN SEQRES 91 A 1228 GLU ASN ALA ILE LEU PRO LYS ASN ALA ASP ALA ASN GLY SEQRES 92 A 1228 ALA TYR ASN ILE ALA ARG LYS VAL LEU TRP ALA ILE GLY SEQRES 93 A 1228 GLN PHE LYS LYS ALA GLU ASP GLU LYS LEU ASP LYS VAL SEQRES 94 A 1228 LYS ILE ALA ILE SER ASN LYS GLU TRP LEU GLU TYR ALA SEQRES 95 A 1228 GLN THR SER VAL LYS HIS SEQRES 1 G 40 A A U U U C U A C U A A G SEQRES 2 G 40 U G U A G A U C G C A U C SEQRES 3 G 40 C A G U A A A G C G G C A SEQRES 4 G 40 C HET MG A1301 1 HET MG G 101 1 HETNAM MG MAGNESIUM ION FORMUL 3 MG 2(MG 2+) HELIX 1 AA1 SER A 2 PHE A 7 5 6 HELIX 2 AA2 LYS A 26 LYS A 34 1 9 HELIX 3 AA3 ARG A 35 LEU A 66 1 32 HELIX 4 AA4 HIS A 67 ILE A 69 5 3 HELIX 5 AA5 ASN A 73 ARG A 82 1 10 HELIX 6 AA6 LYS A 89 ASN A 112 1 24 HELIX 7 AA7 LYS A 121 THR A 126 1 6 HELIX 8 AA8 THR A 126 PHE A 131 1 6 HELIX 9 AA9 GLU A 137 SER A 143 1 7 HELIX 10 AB1 PHE A 147 ALA A 150 5 4 HELIX 11 AB2 PHE A 151 ASN A 160 1 10 HELIX 12 AB3 MET A 161 SER A 163 5 3 HELIX 13 AB4 SER A 170 ASN A 177 1 8 HELIX 14 AB5 GLU A 178 ASP A 194 1 17 HELIX 15 AB6 ALA A 195 PHE A 197 5 3 HELIX 16 AB7 ASP A 198 GLN A 203 1 6 HELIX 17 AB8 GLN A 203 LEU A 210 1 8 HELIX 18 AB9 VAL A 216 LEU A 229 5 14 HELIX 19 AC1 THR A 230 GLY A 243 1 14 HELIX 20 AC2 GLY A 254 TYR A 262 1 9 HELIX 21 AC3 ASN A 263 LYS A 265 5 3 HELIX 22 AC4 SER A 296 ASN A 309 1 14 HELIX 23 AC5 SER A 312 ASN A 327 1 16 HELIX 24 AC6 PHE A 328 TYR A 331 5 4 HELIX 25 AC7 GLY A 341 PHE A 352 1 12 HELIX 26 AC8 ASN A 356 LEU A 371 1 16 HELIX 27 AC9 THR A 378 ILE A 392 1 15 HELIX 28 AD1 LEU A 397 ALA A 404 1 8 HELIX 29 AD2 SER A 409 SER A 432 1 24 HELIX 30 AD3 GLU A 433 ASP A 437 5 5 HELIX 31 AD4 ASN A 449 LYS A 471 1 23 HELIX 32 AD5 ASP A 483 LEU A 498 1 16 HELIX 33 AD6 LYS A 499 GLN A 513 1 15 HELIX 34 AD7 LYS A 538 ARG A 543 1 6 HELIX 35 AD8 LYS A 560 GLN A 567 5 8 HELIX 36 AD9 GLY A 588 PHE A 598 1 11 HELIX 37 AE1 SER A 599 TYR A 606 1 8 HELIX 38 AE2 SER A 609 GLY A 619 1 11 HELIX 39 AE3 ASN A 628 ARG A 645 1 18 HELIX 40 AE4 TYR A 646 ASN A 651 1 6 HELIX 41 AE5 GLU A 659 TYR A 663 5 5 HELIX 42 AE6 ASP A 665 GLY A 677 1 13 HELIX 43 AE7 LYS A 687 GLU A 696 1 10 HELIX 44 AE8 ASN A 706 SER A 710 5 5 HELIX 45 AE9 ASN A 718 LEU A 727 1 10 HELIX 46 AF1 LYS A 752 LEU A 756 5 5 HELIX 47 AF2 ASP A 786 GLU A 791 5 6 HELIX 48 AF3 LYS A 811 HIS A 822 1 12 HELIX 49 AF4 TYR A 872 ALA A 886 1 15 HELIX 50 AF5 ASN A 889 ASP A 919 1 31 HELIX 51 AF6 GLU A 939 TYR A 956 1 18 HELIX 52 AF7 SER A 982 MET A 986 5 5 HELIX 53 AF8 SER A 1020 PHE A 1031 1 12 HELIX 54 AF9 LYS A 1050 PHE A 1052 5 3 HELIX 55 AG1 LEU A 1091 GLY A 1103 1 13 HELIX 56 AG2 ILE A 1111 GLU A 1117 1 7 HELIX 57 AG3 ASP A 1120 LEU A 1135 1 16 HELIX 58 AG4 ASN A 1178 LYS A 1199 1 22 HELIX 59 AG5 LYS A 1205 VAL A 1209 5 5 HELIX 60 AG6 SER A 1214 VAL A 1226 1 13 SHEET 1 AA1 9 PHE A 521 LEU A 523 0 SHEET 2 AA1 9 GLU A 743 ARG A 747 -1 O LEU A 744 N LEU A 523 SHEET 3 AA1 9 GLN A 793 ILE A 802 -1 O GLN A 793 N ARG A 747 SHEET 4 AA1 9 LEU A 13 PRO A 23 -1 N LEU A 17 O ILE A 798 SHEET 5 AA1 9 LEU A 699 TYR A 705 -1 O GLN A 703 N ILE A 22 SHEET 6 AA1 9 LYS A 552 MET A 558 -1 N ILE A 557 O TYR A 700 SHEET 7 AA1 9 ALA A 544 TYR A 549 -1 N LEU A 547 O TYR A 554 SHEET 8 AA1 9 ASN A 577 LEU A 585 -1 O GLU A 579 N ARG A 548 SHEET 9 AA1 9 TYR A 678 SER A 686 -1 O LYS A 679 N LYS A 584 SHEET 1 AA2 4 PHE A 521 LEU A 523 0 SHEET 2 AA2 4 GLU A 743 ARG A 747 -1 O LEU A 744 N LEU A 523 SHEET 3 AA2 4 GLN A 793 ILE A 802 -1 O GLN A 793 N ARG A 747 SHEET 4 AA2 4 ILE A 736 LEU A 738 -1 N ARG A 737 O ALA A 801 SHEET 1 AA3 2 PHE A 337 LYS A 339 0 SHEET 2 AA3 2 SER A 394 SER A 396 -1 O PHE A 395 N VAL A 338 SHEET 1 AA4 2 VAL A 758 HIS A 759 0 SHEET 2 AA4 2 VAL A 783 TYR A 784 -1 O VAL A 783 N HIS A 759 SHEET 1 AA5 2 ILE A 765 ALA A 766 0 SHEET 2 AA5 2 THR A 776 THR A 777 -1 O THR A 777 N ILE A 765 SHEET 1 AA6 6 ILE A 850 SER A 855 0 SHEET 2 AA6 6 LEU A 839 VAL A 844 -1 N VAL A 843 O GLU A 852 SHEET 3 AA6 6 VAL A 828 ARG A 833 -1 N GLY A 830 O VAL A 842 SHEET 4 AA6 6 VAL A 921 GLU A 925 1 O ALA A 923 N ILE A 829 SHEET 5 AA6 6 ILE A 993 ILE A 996 1 O ILE A 996 N LEU A 924 SHEET 6 AA6 6 GLN A 989 ASN A 990 -1 N ASN A 990 O ILE A 993 SHEET 1 AA7 2 GLU A 858 PHE A 863 0 SHEET 2 AA7 2 ILE A 866 ASP A 871 -1 O THR A 870 N ILE A 859 SHEET 1 AA8 3 ARG A1033 VAL A1037 0 SHEET 2 AA8 3 LEU A1042 ASP A1048 -1 O LEU A1042 N VAL A1037 SHEET 3 AA8 3 LYS A1062 TYR A1066 -1 O LEU A1065 N PHE A1045 SHEET 1 AA9 2 ASN A1070 ARG A1073 0 SHEET 2 AA9 2 GLU A1087 CYS A1090 -1 O VAL A1089 N ARG A1071 SHEET 1 AB1 2 ARG A1138 SER A1140 0 SHEET 2 AB1 2 ASP A1148 LEU A1150 -1 O PHE A1149 N ASN A1139 LINK O THR A 716 MG MG A1301 1555 1555 2.30 CRYST1 168.259 83.221 124.304 90.00 106.21 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005943 0.000000 0.001728 0.00000 SCALE2 0.000000 0.012016 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008378 0.00000