HEADER IMMUNE SYSTEM 27-APR-20 6WPP TITLE HUMAN NIK IN COMPLEX WITH LIGAND COMPOUND X COMPND MOL_ID: 1; COMPND 2 MOLECULE: MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 14; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: KINASE DOMAIN RESIDUES 343-686; COMPND 5 SYNONYM: NF-KAPPA-BETA-INDUCING KINASE,HSNIK,SERINE/THREONINE-PROTEIN COMPND 6 KINASE NIK; COMPND 7 EC: 2.7.11.25; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MAP3K14, NIK; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS NF-KAPPAB SIGNALING, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR A.Y.SHIH,M.HACK,T.MIRZADEGAN REVDAT 4 06-MAR-24 6WPP 1 REMARK REVDAT 3 02-DEC-20 6WPP 1 JRNL REVDAT 2 21-OCT-20 6WPP 1 REMARK REVDAT 1 26-AUG-20 6WPP 0 JRNL AUTH A.Y.SHIH,M.HACK,T.MIRZADEGAN JRNL TITL IMPACT OF PROTEIN PREPARATION ON RESULTING ACCURACY OF FEP JRNL TITL 2 CALCULATIONS. JRNL REF J.CHEM.INF.MODEL. V. 60 5287 2020 JRNL REFN ESSN 1549-960X JRNL PMID 32786514 JRNL DOI 10.1021/ACS.JCIM.0C00445 REMARK 2 REMARK 2 RESOLUTION. 2.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 73.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 22138 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.256 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.400 REMARK 3 FREE R VALUE TEST SET COUNT : 1011 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.55 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.62 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1578 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.64 REMARK 3 BIN R VALUE (WORKING SET) : 0.2790 REMARK 3 BIN FREE R VALUE SET COUNT : 67 REMARK 3 BIN FREE R VALUE : 0.3990 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4816 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 36 REMARK 3 SOLVENT ATOMS : 118 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 52.74 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.72000 REMARK 3 B22 (A**2) : -1.04000 REMARK 3 B33 (A**2) : 1.14000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.84000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.804 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.315 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.224 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.205 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.939 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.891 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4984 ; 0.007 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3432 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6749 ; 1.025 ; 1.977 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8351 ; 0.945 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 625 ; 4.962 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 214 ;33.846 ;23.411 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 836 ;11.500 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 38 ;11.834 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 729 ; 0.054 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5587 ; 0.003 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 991 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6WPP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-APR-20. REMARK 100 THE DEPOSITION ID IS D_1000248729. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-FEB-16 REMARK 200 TEMPERATURE (KELVIN) : 100.000 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00001049042 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23150 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.550 REMARK 200 RESOLUTION RANGE LOW (A) : 73.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.06800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.1100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.65 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : 0.49600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.13 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.42 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG1500, PH 7, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 278K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 40.76050 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 340 REMARK 465 PRO A 341 REMARK 465 MET A 342 REMARK 465 GLY A 343 REMARK 465 GLY A 364 REMARK 465 SER A 365 REMARK 465 ARG A 366 REMARK 465 SER A 367 REMARK 465 ARG A 368 REMARK 465 GLU A 369 REMARK 465 PRO A 370 REMARK 465 SER A 371 REMARK 465 PRO A 372 REMARK 465 LYS A 373 REMARK 465 THR A 374 REMARK 465 GLU A 375 REMARK 465 ASP A 544 REMARK 465 GLY A 545 REMARK 465 LEU A 546 REMARK 465 GLY A 547 REMARK 465 LYS A 548 REMARK 465 SER A 549 REMARK 465 LEU A 550 REMARK 465 PRO A 675 REMARK 465 PRO A 676 REMARK 465 PRO A 677 REMARK 465 ASN A 678 REMARK 465 GLN A 679 REMARK 465 ALA A 680 REMARK 465 ASN A 681 REMARK 465 TYR A 682 REMARK 465 HIS A 683 REMARK 465 GLN A 684 REMARK 465 THR A 685 REMARK 465 LEU A 686 REMARK 465 GLY B 340 REMARK 465 PRO B 341 REMARK 465 MET B 342 REMARK 465 GLY B 364 REMARK 465 SER B 365 REMARK 465 ARG B 366 REMARK 465 SER B 367 REMARK 465 ARG B 368 REMARK 465 GLU B 369 REMARK 465 PRO B 370 REMARK 465 SER B 371 REMARK 465 PRO B 372 REMARK 465 LYS B 373 REMARK 465 THR B 374 REMARK 465 GLU B 375 REMARK 465 ASP B 544 REMARK 465 GLY B 545 REMARK 465 LEU B 546 REMARK 465 GLY B 547 REMARK 465 LYS B 548 REMARK 465 PRO B 675 REMARK 465 PRO B 676 REMARK 465 PRO B 677 REMARK 465 ASN B 678 REMARK 465 GLN B 679 REMARK 465 ALA B 680 REMARK 465 ASN B 681 REMARK 465 TYR B 682 REMARK 465 HIS B 683 REMARK 465 GLN B 684 REMARK 465 THR B 685 REMARK 465 LEU B 686 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 358 CD CE NZ REMARK 480 ARG A 363 CD NE CZ NH1 NH2 REMARK 480 LYS A 387 CD CE NZ REMARK 480 ARG A 408 CG CD NE CZ NH1 NH2 REMARK 480 LYS A 482 NZ REMARK 480 ASP A 554 CG OD1 OD2 REMARK 480 LYS A 662 NZ REMARK 480 GLU A 668 CD OE1 OE2 REMARK 480 LYS B 358 CD CE NZ REMARK 480 ARG B 363 NE CZ NH1 NH2 REMARK 480 GLU B 384 CG CD OE1 OE2 REMARK 480 LYS B 385 CE NZ REMARK 480 ARG B 405 CG CD NE CZ NH1 NH2 REMARK 480 ARG B 408 CG CD NE CZ NH1 NH2 REMARK 480 PHE B 411 CG CD1 CD2 CE1 CE2 CZ REMARK 480 GLU B 413 CG CD OE1 OE2 REMARK 480 LYS B 430 CD CE NZ REMARK 480 MET B 442 CE REMARK 480 LYS B 482 CE NZ REMARK 480 GLN B 542 CD OE1 NE2 REMARK 480 GLU B 668 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 397 -56.96 -126.86 REMARK 500 ASP A 515 53.92 -159.90 REMARK 500 ASP A 534 87.47 64.02 REMARK 500 TRP A 596 -39.15 79.33 REMARK 500 PRO A 614 45.07 -74.55 REMARK 500 ARG A 666 70.74 55.75 REMARK 500 VAL B 397 -59.00 -129.30 REMARK 500 ARG B 509 36.84 -99.75 REMARK 500 ASP B 534 83.15 64.52 REMARK 500 TRP B 596 -44.99 78.26 REMARK 500 LEU B 634 40.36 -102.86 REMARK 500 ARG B 666 70.87 55.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PZ4 A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PZ4 B 701 DBREF 6WPP A 343 686 UNP Q99558 M3K14_HUMAN 343 686 DBREF 6WPP B 343 686 UNP Q99558 M3K14_HUMAN 343 686 SEQADV 6WPP GLY A 340 UNP Q99558 EXPRESSION TAG SEQADV 6WPP PRO A 341 UNP Q99558 EXPRESSION TAG SEQADV 6WPP MET A 342 UNP Q99558 EXPRESSION TAG SEQADV 6WPP ALA A 391 UNP Q99558 TYR 391 CONFLICT SEQADV 6WPP SER A 432 UNP Q99558 ARG 432 CONFLICT SEQADV 6WPP ALA A 464 UNP Q99558 TRP 464 CONFLICT SEQADV 6WPP GLY B 340 UNP Q99558 EXPRESSION TAG SEQADV 6WPP PRO B 341 UNP Q99558 EXPRESSION TAG SEQADV 6WPP MET B 342 UNP Q99558 EXPRESSION TAG SEQADV 6WPP ALA B 391 UNP Q99558 TYR 391 CONFLICT SEQADV 6WPP SER B 432 UNP Q99558 ARG 432 CONFLICT SEQADV 6WPP ALA B 464 UNP Q99558 TRP 464 CONFLICT SEQRES 1 A 347 GLY PRO MET GLY SER VAL SER SER GLY GLN ALA HIS SER SEQRES 2 A 347 LEU THR SER LEU ALA LYS THR TRP ALA ALA ARG GLY SER SEQRES 3 A 347 ARG SER ARG GLU PRO SER PRO LYS THR GLU ASP ASN GLU SEQRES 4 A 347 GLY VAL LEU LEU THR GLU LYS LEU LYS PRO VAL ASP ALA SEQRES 5 A 347 GLU TYR ARG GLU GLU VAL HIS TRP ALA THR HIS GLN LEU SEQRES 6 A 347 ARG LEU GLY ARG GLY SER PHE GLY GLU VAL HIS ARG MET SEQRES 7 A 347 GLU ASP LYS GLN THR GLY PHE GLN CYS ALA VAL LYS LYS SEQRES 8 A 347 VAL SER LEU GLU VAL PHE ARG ALA GLU GLU LEU MET ALA SEQRES 9 A 347 CYS ALA GLY LEU THR SER PRO ARG ILE VAL PRO LEU TYR SEQRES 10 A 347 GLY ALA VAL ARG GLU GLY PRO ALA VAL ASN ILE PHE MET SEQRES 11 A 347 GLU LEU LEU GLU GLY GLY SER LEU GLY GLN LEU VAL LYS SEQRES 12 A 347 GLU GLN GLY CYS LEU PRO GLU ASP ARG ALA LEU TYR TYR SEQRES 13 A 347 LEU GLY GLN ALA LEU GLU GLY LEU GLU TYR LEU HIS SER SEQRES 14 A 347 ARG ARG ILE LEU HIS GLY ASP VAL LYS ALA ASP ASN VAL SEQRES 15 A 347 LEU LEU SER SER ASP GLY SER HIS ALA ALA LEU CYS ASP SEQRES 16 A 347 PHE GLY HIS ALA VAL CYS LEU GLN PRO ASP GLY LEU GLY SEQRES 17 A 347 LYS SER LEU LEU THR GLY ASP TYR ILE PRO GLY THR GLU SEQRES 18 A 347 THR HIS MET ALA PRO GLU VAL VAL LEU GLY ARG SER CYS SEQRES 19 A 347 ASP ALA LYS VAL ASP VAL TRP SER SER CYS CYS MET MET SEQRES 20 A 347 LEU HIS MET LEU ASN GLY CYS HIS PRO TRP THR GLN PHE SEQRES 21 A 347 PHE ARG GLY PRO LEU CYS LEU LYS ILE ALA SER GLU PRO SEQRES 22 A 347 PRO PRO VAL ARG GLU ILE PRO PRO SER CYS ALA PRO LEU SEQRES 23 A 347 THR ALA GLN ALA ILE GLN GLU GLY LEU ARG LYS GLU PRO SEQRES 24 A 347 ILE HIS ARG VAL SER ALA ALA GLU LEU GLY GLY LYS VAL SEQRES 25 A 347 ASN ARG ALA LEU GLN GLN VAL GLY GLY LEU LYS SER PRO SEQRES 26 A 347 TRP ARG GLY GLU TYR LYS GLU PRO ARG HIS PRO PRO PRO SEQRES 27 A 347 ASN GLN ALA ASN TYR HIS GLN THR LEU SEQRES 1 B 347 GLY PRO MET GLY SER VAL SER SER GLY GLN ALA HIS SER SEQRES 2 B 347 LEU THR SER LEU ALA LYS THR TRP ALA ALA ARG GLY SER SEQRES 3 B 347 ARG SER ARG GLU PRO SER PRO LYS THR GLU ASP ASN GLU SEQRES 4 B 347 GLY VAL LEU LEU THR GLU LYS LEU LYS PRO VAL ASP ALA SEQRES 5 B 347 GLU TYR ARG GLU GLU VAL HIS TRP ALA THR HIS GLN LEU SEQRES 6 B 347 ARG LEU GLY ARG GLY SER PHE GLY GLU VAL HIS ARG MET SEQRES 7 B 347 GLU ASP LYS GLN THR GLY PHE GLN CYS ALA VAL LYS LYS SEQRES 8 B 347 VAL SER LEU GLU VAL PHE ARG ALA GLU GLU LEU MET ALA SEQRES 9 B 347 CYS ALA GLY LEU THR SER PRO ARG ILE VAL PRO LEU TYR SEQRES 10 B 347 GLY ALA VAL ARG GLU GLY PRO ALA VAL ASN ILE PHE MET SEQRES 11 B 347 GLU LEU LEU GLU GLY GLY SER LEU GLY GLN LEU VAL LYS SEQRES 12 B 347 GLU GLN GLY CYS LEU PRO GLU ASP ARG ALA LEU TYR TYR SEQRES 13 B 347 LEU GLY GLN ALA LEU GLU GLY LEU GLU TYR LEU HIS SER SEQRES 14 B 347 ARG ARG ILE LEU HIS GLY ASP VAL LYS ALA ASP ASN VAL SEQRES 15 B 347 LEU LEU SER SER ASP GLY SER HIS ALA ALA LEU CYS ASP SEQRES 16 B 347 PHE GLY HIS ALA VAL CYS LEU GLN PRO ASP GLY LEU GLY SEQRES 17 B 347 LYS SER LEU LEU THR GLY ASP TYR ILE PRO GLY THR GLU SEQRES 18 B 347 THR HIS MET ALA PRO GLU VAL VAL LEU GLY ARG SER CYS SEQRES 19 B 347 ASP ALA LYS VAL ASP VAL TRP SER SER CYS CYS MET MET SEQRES 20 B 347 LEU HIS MET LEU ASN GLY CYS HIS PRO TRP THR GLN PHE SEQRES 21 B 347 PHE ARG GLY PRO LEU CYS LEU LYS ILE ALA SER GLU PRO SEQRES 22 B 347 PRO PRO VAL ARG GLU ILE PRO PRO SER CYS ALA PRO LEU SEQRES 23 B 347 THR ALA GLN ALA ILE GLN GLU GLY LEU ARG LYS GLU PRO SEQRES 24 B 347 ILE HIS ARG VAL SER ALA ALA GLU LEU GLY GLY LYS VAL SEQRES 25 B 347 ASN ARG ALA LEU GLN GLN VAL GLY GLY LEU LYS SER PRO SEQRES 26 B 347 TRP ARG GLY GLU TYR LYS GLU PRO ARG HIS PRO PRO PRO SEQRES 27 B 347 ASN GLN ALA ASN TYR HIS GLN THR LEU HET PZ4 A 701 18 HET PZ4 B 701 18 HETNAM PZ4 5-FLUORO-N-METHYL-2-(7H-PYRROLO[2,3-D]PYRIMIDIN-5-YL) HETNAM 2 PZ4 PYRIMIDIN-4-AMINE FORMUL 3 PZ4 2(C11 H9 F N6) FORMUL 5 HOH *118(H2 O) HELIX 1 AA1 GLN A 349 ARG A 363 1 15 HELIX 2 AA2 GLU A 434 ARG A 437 5 4 HELIX 3 AA3 ALA A 438 ALA A 443 1 6 HELIX 4 AA4 SER A 476 GLY A 485 1 10 HELIX 5 AA5 PRO A 488 ARG A 509 1 22 HELIX 6 AA6 LYS A 517 ASP A 519 5 3 HELIX 7 AA7 THR A 559 MET A 563 5 5 HELIX 8 AA8 ALA A 564 LEU A 569 1 6 HELIX 9 AA9 ALA A 575 GLY A 592 1 18 HELIX 10 AB1 LEU A 604 GLU A 611 1 8 HELIX 11 AB2 PRO A 614 ILE A 618 5 5 HELIX 12 AB3 ALA A 623 LEU A 634 1 12 HELIX 13 AB4 SER A 643 GLY A 659 1 17 HELIX 14 AB5 GLN B 349 ARG B 363 1 15 HELIX 15 AB6 ALA B 438 ALA B 443 1 6 HELIX 16 AB7 SER B 476 GLY B 485 1 10 HELIX 17 AB8 PRO B 488 ARG B 509 1 22 HELIX 18 AB9 LYS B 517 ASP B 519 5 3 HELIX 19 AC1 ALA B 564 LEU B 569 1 6 HELIX 20 AC2 ALA B 575 GLY B 592 1 18 HELIX 21 AC3 LEU B 604 GLU B 611 1 8 HELIX 22 AC4 PRO B 614 ILE B 618 5 5 HELIX 23 AC5 ALA B 623 LEU B 634 1 12 HELIX 24 AC6 SER B 643 VAL B 658 1 16 SHEET 1 AA1 7 VAL A 345 SER A 347 0 SHEET 2 AA1 7 ASN A 377 LEU A 381 1 O LEU A 381 N SER A 346 SHEET 3 AA1 7 LEU A 455 GLU A 461 -1 O ARG A 460 N GLU A 378 SHEET 4 AA1 7 ALA A 464 MET A 469 -1 O ASN A 466 N VAL A 459 SHEET 5 AA1 7 GLN A 425 SER A 432 -1 N ALA A 427 O MET A 469 SHEET 6 AA1 7 GLU A 413 ASP A 419 -1 N MET A 417 O CYS A 426 SHEET 7 AA1 7 TRP A 399 ARG A 408 -1 N GLY A 407 O VAL A 414 SHEET 1 AA2 2 ILE A 511 LEU A 512 0 SHEET 2 AA2 2 VAL A 539 CYS A 540 -1 O VAL A 539 N LEU A 512 SHEET 1 AA3 2 VAL A 521 LEU A 523 0 SHEET 2 AA3 2 ALA A 530 LEU A 532 -1 O ALA A 531 N LEU A 522 SHEET 1 AA4 7 SER B 344 SER B 347 0 SHEET 2 AA4 7 ASN B 377 LEU B 381 1 O ASN B 377 N SER B 344 SHEET 3 AA4 7 LEU B 455 GLU B 461 -1 O ARG B 460 N GLU B 378 SHEET 4 AA4 7 ALA B 464 MET B 469 -1 O ASN B 466 N VAL B 459 SHEET 5 AA4 7 GLN B 425 SER B 432 -1 N VAL B 431 O VAL B 465 SHEET 6 AA4 7 GLU B 413 ASP B 419 -1 N MET B 417 O CYS B 426 SHEET 7 AA4 7 TRP B 399 ARG B 408 -1 N LEU B 406 O VAL B 414 SHEET 1 AA5 2 ILE B 511 LEU B 512 0 SHEET 2 AA5 2 VAL B 539 CYS B 540 -1 O VAL B 539 N LEU B 512 SHEET 1 AA6 2 VAL B 521 LEU B 523 0 SHEET 2 AA6 2 ALA B 530 LEU B 532 -1 O ALA B 531 N LEU B 522 CISPEP 1 GLY A 602 PRO A 603 0 -7.30 SITE 1 AC1 12 ARG A 408 GLY A 409 VAL A 414 ALA A 427 SITE 2 AC1 12 LYS A 429 MET A 469 GLU A 470 LEU A 471 SITE 3 AC1 12 LEU A 472 LEU A 522 ASP A 534 HOH A 841 SITE 1 AC2 12 LEU B 406 GLY B 409 VAL B 414 ALA B 427 SITE 2 AC2 12 LYS B 429 MET B 469 GLU B 470 LEU B 471 SITE 3 AC2 12 LEU B 472 LEU B 522 ASP B 534 HOH B 836 CRYST1 60.483 81.521 78.420 90.00 111.43 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016534 0.000000 0.006490 0.00000 SCALE2 0.000000 0.012267 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013699 0.00000