HEADER TRANSFERASE 23-JUN-18 6A5E TITLE CRYSTAL STRUCTURE OF PLANT PEPTIDE RALF23 IN COMPLEX WITH FER AND LLG2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: RECEPTOR-LIKE PROTEIN KINASE FERONIA; COMPND 3 CHAIN: A, B; COMPND 4 EC: 2.7.11.1; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: GPI-ANCHORED PROTEIN LLG2; COMPND 8 CHAIN: C, D; COMPND 9 FRAGMENT: UNP RESIDUES 42-125; COMPND 10 SYNONYM: LORELEI-LIKE-GPI-ANCHORED PROTEIN 2; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: RALF23; COMPND 14 CHAIN: E, F; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: MOUSE-EAR CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 GENE: FER; SOURCE 6 EXPRESSION_SYSTEM: INSECT CELL EXPRESSION VECTOR PTIE1; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 266783; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 10 ORGANISM_COMMON: MOUSE-EAR CRESS; SOURCE 11 ORGANISM_TAXID: 3702; SOURCE 12 GENE: LLG2, AT2G20700; SOURCE 13 EXPRESSION_SYSTEM: INSECT CELL EXPRESSION VECTOR PTIE1; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 266783; SOURCE 15 MOL_ID: 3; SOURCE 16 ORGANISM_SCIENTIFIC: ARABIDOPSIS; SOURCE 17 ORGANISM_TAXID: 3701; SOURCE 18 EXPRESSION_SYSTEM: INSECT CELL EXPRESSION VECTOR PTIE1; SOURCE 19 EXPRESSION_SYSTEM_TAXID: 266783 KEYWDS A PLANT RECEPTOR-LIGAND COMPLEX FLR, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.XIAO,J.CHAI REVDAT 3 29-JUL-20 6A5E 1 COMPND REMARK HETNAM LINK REVDAT 3 2 1 SITE ATOM REVDAT 2 15-JAN-20 6A5E 1 JRNL REVDAT 1 26-JUN-19 6A5E 0 JRNL AUTH Y.XIAO,M.STEGMANN,Z.HAN,T.A.DEFALCO,K.PARYS,L.XU, JRNL AUTH 2 Y.BELKHADIR,C.ZIPFEL,J.CHAI JRNL TITL MECHANISMS OF RALF PEPTIDE PERCEPTION BY A HETEROTYPIC JRNL TITL 2 RECEPTOR COMPLEX. JRNL REF NATURE V. 572 270 2019 JRNL REFN ESSN 1476-4687 JRNL PMID 31291642 JRNL DOI 10.1038/S41586-019-1409-7 REMARK 2 REMARK 2 RESOLUTION. 2.77 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.13_2998: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.77 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.61 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.960 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.5 REMARK 3 NUMBER OF REFLECTIONS : 32840 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.235 REMARK 3 R VALUE (WORKING SET) : 0.233 REMARK 3 FREE R VALUE : 0.285 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.090 REMARK 3 FREE R VALUE TEST SET COUNT : 1673 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.6121 - 6.3267 0.96 2604 121 0.2481 0.2779 REMARK 3 2 6.3267 - 5.0242 0.96 2561 143 0.2235 0.2954 REMARK 3 3 5.0242 - 4.3899 0.97 2611 154 0.1859 0.2391 REMARK 3 4 4.3899 - 3.9888 0.97 2612 151 0.1927 0.2166 REMARK 3 5 3.9888 - 3.7031 0.97 2589 131 0.2225 0.2512 REMARK 3 6 3.7031 - 3.4849 0.98 2600 153 0.2325 0.2913 REMARK 3 7 3.4849 - 3.3104 0.97 2646 126 0.2572 0.3125 REMARK 3 8 3.3104 - 3.1664 0.98 2612 158 0.2707 0.3661 REMARK 3 9 3.1664 - 3.0445 0.97 2677 126 0.2768 0.3406 REMARK 3 10 3.0445 - 2.9395 0.98 2557 136 0.2885 0.3708 REMARK 3 11 2.9395 - 2.8476 0.97 2650 135 0.2660 0.3996 REMARK 3 12 2.8476 - 2.7662 0.90 2448 139 0.2820 0.3425 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.450 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.790 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 7676 REMARK 3 ANGLE : 1.298 10492 REMARK 3 CHIRALITY : 0.075 1196 REMARK 3 PLANARITY : 0.010 1342 REMARK 3 DIHEDRAL : 13.337 4504 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: SF FILE CONTAINS FRIEDEL PAIRS UNDER REMARK 3 I/F_MINUS AND I/F_PLUS COLUMNS. REMARK 4 REMARK 4 6A5E COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 27-JUN-18. REMARK 100 THE DEPOSITION ID IS D_1300008179. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JAN-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.987 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32854 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.760 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09600 REMARK 200 FOR THE DATA SET : 20.8900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.76 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.83 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.96900 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.47 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.96 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M SODIUM MALONATE, 25% W/V REMARK 280 POLYETHYLENE GLYCOL 3350, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5000 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21470 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, E, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5000 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21460 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -1.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: F, D, B, I, J REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 28 REMARK 465 GLY A 43 REMARK 465 ALA A 44 REMARK 465 SER A 45 REMARK 465 ASN A 46 REMARK 465 LEU A 47 REMARK 465 THR A 48 REMARK 465 SER A 66 REMARK 465 SER A 67 REMARK 465 SER A 68 REMARK 465 GLU A 69 REMARK 465 SER A 119 REMARK 465 TYR A 120 REMARK 465 ASP A 121 REMARK 465 SER A 212 REMARK 465 GLY A 213 REMARK 465 SER A 214 REMARK 465 VAL A 215 REMARK 465 GLY A 376 REMARK 465 ASN A 377 REMARK 465 GLY A 378 REMARK 465 ALA B 28 REMARK 465 GLY B 43 REMARK 465 ALA B 44 REMARK 465 SER B 45 REMARK 465 ASN B 46 REMARK 465 LEU B 47 REMARK 465 THR B 48 REMARK 465 SER B 66 REMARK 465 SER B 67 REMARK 465 SER B 68 REMARK 465 GLU B 69 REMARK 465 SER B 119 REMARK 465 TYR B 120 REMARK 465 ASP B 121 REMARK 465 SER B 212 REMARK 465 GLY B 213 REMARK 465 SER B 214 REMARK 465 VAL B 215 REMARK 465 GLY B 376 REMARK 465 ASN B 377 REMARK 465 GLY B 378 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CD LYS B 72 NH2 ARG B 95 1.33 REMARK 500 CD LYS A 72 NH2 ARG A 95 1.33 REMARK 500 OG SER A 71 NH1 ARG A 92 1.70 REMARK 500 OG SER B 71 NH1 ARG B 92 1.70 REMARK 500 SG CYS C 44 SG CYS C 92 1.74 REMARK 500 SG CYS D 44 SG CYS D 92 1.74 REMARK 500 CD LYS A 72 CZ ARG A 95 1.76 REMARK 500 CD LYS B 72 CZ ARG B 95 1.76 REMARK 500 SG CYS D 79 SG CYS D 124 1.80 REMARK 500 SG CYS C 79 SG CYS C 124 1.80 REMARK 500 ND2 ASN A 305 C1 NAG G 1 1.91 REMARK 500 ND2 ASN B 305 C1 NAG J 1 1.91 REMARK 500 N ALA A 222 ND2 ASN A 410 1.98 REMARK 500 N ALA B 222 ND2 ASN B 410 1.98 REMARK 500 ND2 ASN B 142 O5 NAG B 1004 2.00 REMARK 500 ND2 ASN A 142 O5 NAG A 1004 2.00 REMARK 500 OD1 ASN C 86 OG SER E 7 2.01 REMARK 500 O ASN A 127 CE1 TYR A 184 2.03 REMARK 500 O ASN B 127 CE1 TYR B 184 2.03 REMARK 500 O ARG F 4 O ASP D 123 2.05 REMARK 500 OG SER F 7 OD1 ASN D 86 2.07 REMARK 500 NZ LYS D 119 OD2 ASP B 381 2.08 REMARK 500 OD2 ASP A 381 NZ LYS C 119 2.09 REMARK 500 O VAL C 84 ND2 ASN C 90 2.10 REMARK 500 O VAL D 84 ND2 ASN D 90 2.10 REMARK 500 O ASP C 123 O ARG E 4 2.11 REMARK 500 OG SER A 200 O ASP A 218 2.11 REMARK 500 OG SER B 200 O ASP B 218 2.12 REMARK 500 CD2 LEU B 123 CE1 TYR B 184 2.15 REMARK 500 CD2 LEU A 123 CE1 TYR A 184 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS C 44 CB CYS C 44 SG -0.281 REMARK 500 CYS C 92 CB CYS C 92 SG -0.309 REMARK 500 CYS D 44 CB CYS D 44 SG -0.281 REMARK 500 CYS D 92 CB CYS D 92 SG -0.309 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 32 C - N - CD ANGL. DEV. = -12.7 DEGREES REMARK 500 PRO A 84 C - N - CD ANGL. DEV. = -25.5 DEGREES REMARK 500 CYS C 92 CA - CB - SG ANGL. DEV. = 29.2 DEGREES REMARK 500 CYS D 92 CA - CB - SG ANGL. DEV. = 29.2 DEGREES REMARK 500 PRO B 32 C - N - CD ANGL. DEV. = -12.6 DEGREES REMARK 500 PRO B 84 C - N - CD ANGL. DEV. = -25.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 242 49.22 -78.94 REMARK 500 CYS A 325 123.01 -172.91 REMARK 500 SER A 359 -4.41 74.10 REMARK 500 PRO A 374 44.67 -79.67 REMARK 500 ASN A 392 4.47 82.80 REMARK 500 SER A 412 -121.51 54.48 REMARK 500 TYR C 65 79.53 -113.11 REMARK 500 PRO C 107 173.94 -58.33 REMARK 500 GLU C 117 -57.63 -135.70 REMARK 500 TYR D 65 79.50 -113.13 REMARK 500 PRO D 107 173.99 -58.32 REMARK 500 GLU D 117 -57.67 -135.70 REMARK 500 THR B 242 49.21 -78.92 REMARK 500 CYS B 325 122.99 -172.97 REMARK 500 SER B 359 -4.45 74.16 REMARK 500 PRO B 374 44.72 -79.65 REMARK 500 ASN B 392 4.45 82.85 REMARK 500 SER B 412 -121.50 54.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 NAG G 1 REMARK 610 NAG J 1 DBREF 6A5E A 28 423 UNP Q9SCZ4 FERON_ARATH 28 423 DBREF 6A5E C 42 125 UNP Q6NLF4 LLG2_ARATH 42 125 DBREF 6A5E E 4 18 PDB 6A5E 6A5E 4 18 DBREF 6A5E F 4 18 PDB 6A5E 6A5E 4 18 DBREF 6A5E D 42 125 UNP Q6NLF4 LLG2_ARATH 42 125 DBREF 6A5E B 28 423 UNP Q9SCZ4 FERON_ARATH 28 423 SEQRES 1 A 396 ALA ASP TYR SER PRO THR GLU LYS ILE LEU LEU ASN CYS SEQRES 2 A 396 GLY GLY GLY ALA SER ASN LEU THR ASP THR ASP ASN ARG SEQRES 3 A 396 ILE TRP ILE SER ASP VAL LYS SER LYS PHE LEU SER SER SEQRES 4 A 396 SER SER GLU ASP SER LYS THR SER PRO ALA LEU THR GLN SEQRES 5 A 396 ASP PRO SER VAL PRO GLU VAL PRO TYR MET THR ALA ARG SEQRES 6 A 396 VAL PHE ARG SER PRO PHE THR TYR THR PHE PRO VAL ALA SEQRES 7 A 396 SER GLY ARG LYS PHE VAL ARG LEU TYR PHE TYR PRO ASN SEQRES 8 A 396 SER TYR ASP GLY LEU ASN ALA THR ASN SER LEU PHE SER SEQRES 9 A 396 VAL SER PHE GLY PRO TYR THR LEU LEU LYS ASN PHE SER SEQRES 10 A 396 ALA SER GLN THR ALA GLU ALA LEU THR TYR ALA PHE ILE SEQRES 11 A 396 ILE LYS GLU PHE VAL VAL ASN VAL GLU GLY GLY THR LEU SEQRES 12 A 396 ASN MET THR PHE THR PRO GLU SER ALA PRO SER ASN ALA SEQRES 13 A 396 TYR ALA PHE VAL ASN GLY ILE GLU VAL THR SER MET PRO SEQRES 14 A 396 ASP MET TYR SER SER THR ASP GLY THR LEU THR MET VAL SEQRES 15 A 396 GLY SER SER GLY SER VAL THR ILE ASP ASN SER THR ALA SEQRES 16 A 396 LEU GLU ASN VAL TYR ARG LEU ASN VAL GLY GLY ASN ASP SEQRES 17 A 396 ILE SER PRO SER ALA ASP THR GLY LEU TYR ARG SER TRP SEQRES 18 A 396 TYR ASP ASP GLN PRO TYR ILE PHE GLY ALA GLY LEU GLY SEQRES 19 A 396 ILE PRO GLU THR ALA ASP PRO ASN MET THR ILE LYS TYR SEQRES 20 A 396 PRO THR GLY THR PRO THR TYR VAL ALA PRO VAL ASP VAL SEQRES 21 A 396 TYR SER THR ALA ARG SER MET GLY PRO THR ALA GLN ILE SEQRES 22 A 396 ASN LEU ASN TYR ASN LEU THR TRP ILE PHE SER ILE ASP SEQRES 23 A 396 SER GLY PHE THR TYR LEU VAL ARG LEU HIS PHE CYS GLU SEQRES 24 A 396 VAL SER SER ASN ILE THR LYS ILE ASN GLN ARG VAL PHE SEQRES 25 A 396 THR ILE TYR LEU ASN ASN GLN THR ALA GLU PRO GLU ALA SEQRES 26 A 396 ASP VAL ILE ALA TRP THR SER SER ASN GLY VAL PRO PHE SEQRES 27 A 396 HIS LYS ASP TYR VAL VAL ASN PRO PRO GLU GLY ASN GLY SEQRES 28 A 396 GLN GLN ASP LEU TRP LEU ALA LEU HIS PRO ASN PRO VAL SEQRES 29 A 396 ASN LYS PRO GLU TYR TYR ASP SER LEU LEU ASN GLY VAL SEQRES 30 A 396 GLU ILE PHE LYS MET ASN THR SER ASP GLY ASN LEU ALA SEQRES 31 A 396 GLY THR ASN PRO ILE PRO SEQRES 1 C 84 THR THR CYS LYS GLU ASP PHE ALA ASN LYS ASN TYR THR SEQRES 2 C 84 ILE ILE THR SER ARG CYS LYS GLY PRO ASN TYR PRO ALA SEQRES 3 C 84 ASN VAL CYS CYS SER ALA PHE LYS ASP PHE ALA CYS PRO SEQRES 4 C 84 PHE ALA GLU VAL LEU ASN ASP GLU LYS ASN ASP CYS ALA SEQRES 5 C 84 SER THR MET PHE SER TYR ILE ASN LEU TYR GLY ARG TYR SEQRES 6 C 84 PRO PRO GLY ILE PHE ALA ASN MET CYS LYS GLU GLY LYS SEQRES 7 C 84 GLU GLY LEU ASP CYS THR SEQRES 1 E 15 ARG TYR ILE SER TYR GLY ALA LEU ARG ARG ASN THR ILE SEQRES 2 E 15 PRO CYS SEQRES 1 F 15 ARG TYR ILE SER TYR GLY ALA LEU ARG ARG ASN THR ILE SEQRES 2 F 15 PRO CYS SEQRES 1 D 84 THR THR CYS LYS GLU ASP PHE ALA ASN LYS ASN TYR THR SEQRES 2 D 84 ILE ILE THR SER ARG CYS LYS GLY PRO ASN TYR PRO ALA SEQRES 3 D 84 ASN VAL CYS CYS SER ALA PHE LYS ASP PHE ALA CYS PRO SEQRES 4 D 84 PHE ALA GLU VAL LEU ASN ASP GLU LYS ASN ASP CYS ALA SEQRES 5 D 84 SER THR MET PHE SER TYR ILE ASN LEU TYR GLY ARG TYR SEQRES 6 D 84 PRO PRO GLY ILE PHE ALA ASN MET CYS LYS GLU GLY LYS SEQRES 7 D 84 GLU GLY LEU ASP CYS THR SEQRES 1 B 396 ALA ASP TYR SER PRO THR GLU LYS ILE LEU LEU ASN CYS SEQRES 2 B 396 GLY GLY GLY ALA SER ASN LEU THR ASP THR ASP ASN ARG SEQRES 3 B 396 ILE TRP ILE SER ASP VAL LYS SER LYS PHE LEU SER SER SEQRES 4 B 396 SER SER GLU ASP SER LYS THR SER PRO ALA LEU THR GLN SEQRES 5 B 396 ASP PRO SER VAL PRO GLU VAL PRO TYR MET THR ALA ARG SEQRES 6 B 396 VAL PHE ARG SER PRO PHE THR TYR THR PHE PRO VAL ALA SEQRES 7 B 396 SER GLY ARG LYS PHE VAL ARG LEU TYR PHE TYR PRO ASN SEQRES 8 B 396 SER TYR ASP GLY LEU ASN ALA THR ASN SER LEU PHE SER SEQRES 9 B 396 VAL SER PHE GLY PRO TYR THR LEU LEU LYS ASN PHE SER SEQRES 10 B 396 ALA SER GLN THR ALA GLU ALA LEU THR TYR ALA PHE ILE SEQRES 11 B 396 ILE LYS GLU PHE VAL VAL ASN VAL GLU GLY GLY THR LEU SEQRES 12 B 396 ASN MET THR PHE THR PRO GLU SER ALA PRO SER ASN ALA SEQRES 13 B 396 TYR ALA PHE VAL ASN GLY ILE GLU VAL THR SER MET PRO SEQRES 14 B 396 ASP MET TYR SER SER THR ASP GLY THR LEU THR MET VAL SEQRES 15 B 396 GLY SER SER GLY SER VAL THR ILE ASP ASN SER THR ALA SEQRES 16 B 396 LEU GLU ASN VAL TYR ARG LEU ASN VAL GLY GLY ASN ASP SEQRES 17 B 396 ILE SER PRO SER ALA ASP THR GLY LEU TYR ARG SER TRP SEQRES 18 B 396 TYR ASP ASP GLN PRO TYR ILE PHE GLY ALA GLY LEU GLY SEQRES 19 B 396 ILE PRO GLU THR ALA ASP PRO ASN MET THR ILE LYS TYR SEQRES 20 B 396 PRO THR GLY THR PRO THR TYR VAL ALA PRO VAL ASP VAL SEQRES 21 B 396 TYR SER THR ALA ARG SER MET GLY PRO THR ALA GLN ILE SEQRES 22 B 396 ASN LEU ASN TYR ASN LEU THR TRP ILE PHE SER ILE ASP SEQRES 23 B 396 SER GLY PHE THR TYR LEU VAL ARG LEU HIS PHE CYS GLU SEQRES 24 B 396 VAL SER SER ASN ILE THR LYS ILE ASN GLN ARG VAL PHE SEQRES 25 B 396 THR ILE TYR LEU ASN ASN GLN THR ALA GLU PRO GLU ALA SEQRES 26 B 396 ASP VAL ILE ALA TRP THR SER SER ASN GLY VAL PRO PHE SEQRES 27 B 396 HIS LYS ASP TYR VAL VAL ASN PRO PRO GLU GLY ASN GLY SEQRES 28 B 396 GLN GLN ASP LEU TRP LEU ALA LEU HIS PRO ASN PRO VAL SEQRES 29 B 396 ASN LYS PRO GLU TYR TYR ASP SER LEU LEU ASN GLY VAL SEQRES 30 B 396 GLU ILE PHE LYS MET ASN THR SER ASP GLY ASN LEU ALA SEQRES 31 B 396 GLY THR ASN PRO ILE PRO HET NAG G 1 14 HET NAG G 2 14 HET NAG H 1 14 HET NAG H 2 14 HET NAG I 1 14 HET NAG I 2 14 HET NAG J 1 14 HET NAG J 2 14 HET NAG A1004 14 HET NAG C 202 14 HET NAG D1001 14 HET NAG B1004 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE FORMUL 7 NAG 12(C8 H15 N O6) HELIX 1 AA1 PRO A 84 MET A 89 1 6 HELIX 2 AA2 SER A 144 LEU A 152 1 9 HELIX 3 AA3 SER A 237 ASP A 241 5 5 HELIX 4 AA4 GLN A 252 ILE A 255 5 4 HELIX 5 AA5 PRO A 284 SER A 289 1 6 HELIX 6 AA6 THR A 297 ASN A 303 1 7 HELIX 7 AA7 VAL A 354 SER A 359 1 6 HELIX 8 AA8 TYR C 53 SER C 58 1 6 HELIX 9 AA9 PRO C 66 CYS C 79 1 14 HELIX 10 AB1 PHE C 81 ASN C 86 1 6 HELIX 11 AB2 ASP C 91 ARG C 105 1 15 HELIX 12 AB3 GLY C 109 CYS C 115 1 7 HELIX 13 AB4 SER E 7 ARG E 12 1 6 HELIX 14 AB5 ARG E 13 THR E 15 5 3 HELIX 15 AB6 SER F 7 ARG F 12 1 6 HELIX 16 AB7 ARG F 13 THR F 15 5 3 HELIX 17 AB8 TYR D 53 SER D 58 1 6 HELIX 18 AB9 PRO D 66 CYS D 79 1 14 HELIX 19 AC1 PHE D 81 ASN D 86 1 6 HELIX 20 AC2 ASP D 91 ARG D 105 1 15 HELIX 21 AC3 GLY D 109 CYS D 115 1 7 HELIX 22 AC4 PRO B 84 MET B 89 1 6 HELIX 23 AC5 SER B 144 LEU B 152 1 9 HELIX 24 AC6 SER B 237 ASP B 241 5 5 HELIX 25 AC7 GLN B 252 ILE B 255 5 4 HELIX 26 AC8 PRO B 284 SER B 289 1 6 HELIX 27 AC9 THR B 297 ASN B 303 1 7 HELIX 28 AD1 VAL B 354 SER B 359 1 6 SHEET 1 AA1 7 ILE A 56 SER A 57 0 SHEET 2 AA1 7 LYS A 35 ASN A 39 1 N ASN A 39 O ILE A 56 SHEET 3 AA1 7 GLY A 189 MET A 195 -1 O ILE A 190 N LEU A 38 SHEET 4 AA1 7 GLY A 107 PHE A 115 -1 N ARG A 112 O GLU A 191 SHEET 5 AA1 7 ILE A 157 VAL A 165 -1 O VAL A 165 N GLY A 107 SHEET 6 AA1 7 LEU A 223 ASN A 230 -1 O LEU A 223 N VAL A 162 SHEET 7 AA1 7 TYR A 249 ASP A 250 1 O TYR A 249 N ARG A 228 SHEET 1 AA2 9 ILE A 56 SER A 57 0 SHEET 2 AA2 9 LYS A 35 ASN A 39 1 N ASN A 39 O ILE A 56 SHEET 3 AA2 9 GLY A 189 MET A 195 -1 O ILE A 190 N LEU A 38 SHEET 4 AA2 9 GLY A 107 PHE A 115 -1 N ARG A 112 O GLU A 191 SHEET 5 AA2 9 ILE A 157 VAL A 165 -1 O VAL A 165 N GLY A 107 SHEET 6 AA2 9 LEU A 223 ASN A 230 -1 O LEU A 223 N VAL A 162 SHEET 7 AA2 9 GLY A 403 MET A 409 -1 O LYS A 408 N GLU A 224 SHEET 8 AA2 9 THR A 317 PHE A 324 -1 N ARG A 321 O GLU A 405 SHEET 9 AA2 9 PHE A 365 VAL A 371 -1 O VAL A 371 N TYR A 318 SHEET 1 AA3 3 SER A 74 PRO A 75 0 SHEET 2 AA3 3 THR A 90 PHE A 94 -1 O ALA A 91 N SER A 74 SHEET 3 AA3 3 ALA A 185 VAL A 187 -1 O ALA A 185 N PHE A 94 SHEET 1 AA4 4 PHE A 98 TYR A 100 0 SHEET 2 AA4 4 MET A 172 PRO A 176 -1 O MET A 172 N TYR A 100 SHEET 3 AA4 4 PHE A 130 PHE A 134 -1 N SER A 131 O THR A 175 SHEET 4 AA4 4 TYR A 137 PHE A 143 -1 O TYR A 137 N PHE A 134 SHEET 1 AA5 2 ILE A 262 THR A 265 0 SHEET 2 AA5 2 THR A 290 SER A 293 -1 O SER A 293 N ILE A 262 SHEET 1 AA6 4 LEU A 306 ILE A 312 0 SHEET 2 AA6 4 GLN A 380 PRO A 388 -1 O GLN A 380 N ILE A 312 SHEET 3 AA6 4 VAL A 338 LEU A 343 -1 N THR A 340 O HIS A 387 SHEET 4 AA6 4 GLN A 346 ASP A 353 -1 O ALA A 352 N PHE A 339 SHEET 1 AA7 7 ILE B 56 SER B 57 0 SHEET 2 AA7 7 LYS B 35 ASN B 39 1 N ASN B 39 O ILE B 56 SHEET 3 AA7 7 GLY B 189 MET B 195 -1 O ILE B 190 N LEU B 38 SHEET 4 AA7 7 GLY B 107 PHE B 115 -1 N ARG B 112 O GLU B 191 SHEET 5 AA7 7 ILE B 157 VAL B 165 -1 O VAL B 165 N GLY B 107 SHEET 6 AA7 7 LEU B 223 ASN B 230 -1 O LEU B 223 N VAL B 162 SHEET 7 AA7 7 TYR B 249 ASP B 250 1 O TYR B 249 N ARG B 228 SHEET 1 AA8 9 ILE B 56 SER B 57 0 SHEET 2 AA8 9 LYS B 35 ASN B 39 1 N ASN B 39 O ILE B 56 SHEET 3 AA8 9 GLY B 189 MET B 195 -1 O ILE B 190 N LEU B 38 SHEET 4 AA8 9 GLY B 107 PHE B 115 -1 N ARG B 112 O GLU B 191 SHEET 5 AA8 9 ILE B 157 VAL B 165 -1 O VAL B 165 N GLY B 107 SHEET 6 AA8 9 LEU B 223 ASN B 230 -1 O LEU B 223 N VAL B 162 SHEET 7 AA8 9 GLY B 403 MET B 409 -1 O LYS B 408 N GLU B 224 SHEET 8 AA8 9 THR B 317 PHE B 324 -1 N ARG B 321 O GLU B 405 SHEET 9 AA8 9 PHE B 365 VAL B 371 -1 O VAL B 371 N TYR B 318 SHEET 1 AA9 3 SER B 74 PRO B 75 0 SHEET 2 AA9 3 THR B 90 PHE B 94 -1 O ALA B 91 N SER B 74 SHEET 3 AA9 3 ALA B 185 VAL B 187 -1 O ALA B 185 N PHE B 94 SHEET 1 AB1 4 PHE B 98 TYR B 100 0 SHEET 2 AB1 4 MET B 172 PRO B 176 -1 O MET B 172 N TYR B 100 SHEET 3 AB1 4 PHE B 130 PHE B 134 -1 N SER B 131 O THR B 175 SHEET 4 AB1 4 TYR B 137 PHE B 143 -1 O TYR B 137 N PHE B 134 SHEET 1 AB2 2 ILE B 262 THR B 265 0 SHEET 2 AB2 2 THR B 290 SER B 293 -1 O SER B 293 N ILE B 262 SHEET 1 AB3 4 LEU B 306 ILE B 312 0 SHEET 2 AB3 4 GLN B 380 PRO B 388 -1 O GLN B 380 N ILE B 312 SHEET 3 AB3 4 VAL B 338 LEU B 343 -1 N THR B 340 O HIS B 387 SHEET 4 AB3 4 GLN B 346 ASP B 353 -1 O ALA B 352 N PHE B 339 SSBOND 1 CYS C 60 CYS C 70 1555 1555 2.42 SSBOND 2 CYS C 71 CYS C 115 1555 1555 2.04 SSBOND 3 CYS D 60 CYS D 70 1555 1555 2.42 SSBOND 4 CYS D 71 CYS D 115 1555 1555 2.04 LINK ND2 ASN A 142 C1 NAG A1004 1555 1555 1.27 LINK ND2 ASN A 345 C1 NAG H 1 1555 1555 1.57 LINK ND2 ASN C 52 C1 NAG C 202 1555 1555 1.45 LINK ND2 ASN D 52 C1 NAG D1001 1555 1555 1.45 LINK ND2 ASN B 142 C1 NAG B1004 1555 1555 1.27 LINK ND2 ASN B 345 C1 NAG I 1 1555 1555 1.57 LINK O4 NAG G 1 C1 NAG G 2 1555 1555 1.52 LINK O4 NAG H 1 C1 NAG H 2 1555 1555 1.61 LINK O4 NAG I 1 C1 NAG I 2 1555 1555 1.61 LINK O4 NAG J 1 C1 NAG J 2 1555 1555 1.52 CISPEP 1 VAL A 86 PRO A 87 0 -3.76 CISPEP 2 VAL B 86 PRO B 87 0 -3.82 CRYST1 62.312 62.360 97.478 105.72 91.30 108.48 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016048 0.005363 0.002028 0.00000 SCALE2 0.000000 0.016907 0.005189 0.00000 SCALE3 0.000000 0.000000 0.010734 0.00000