HEADER OXIDOREDUCTASE 10-MAY-17 5VRC TITLE CRYSTAL STRUCTURE FOR METHYLOBACTERIUM EXTORQUENS PQQC (TRUNCATION OF TITLE 2 NATURAL CD FUSION) COMPND MOL_ID: 1; COMPND 2 MOLECULE: BIFUNCTIONAL COENZYME PQQ SYNTHESIS PROTEIN C/D; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: C DOMAIN RESIDUES 1-260; COMPND 5 SYNONYM: PYRROLOQUINOLINE QUINONE BIOSYNTHESIS PROTEIN C/D; COMPND 6 EC: 1.3.3.11; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METHYLOBACTERIUM EXTORQUENS (STRAIN ATCC 14718 SOURCE 3 / DSM 1338 / JCM 2805 / NCIMB 9133 / AM1); SOURCE 4 ORGANISM_TAXID: 272630; SOURCE 5 STRAIN: ATCC 14718 / DSM 1338 / JCM 2805 / NCIMB 9133 / AM1; SOURCE 6 GENE: PQQCD, MEXAM1_META1P1749; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PQQ, OXIDASE, ALPHA-HELICAL BUNDLE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR R.L.EVANS III,C.M.WILMOT,M.A.ESLER REVDAT 4 04-OCT-23 5VRC 1 REMARK REVDAT 3 01-JAN-20 5VRC 1 REMARK REVDAT 2 29-MAY-19 5VRC 1 JRNL REVDAT 1 16-MAY-18 5VRC 0 JRNL AUTH R.L.EVANS III,M.A.ESLER,J.A.LATHAM,J.P.KLINMAN,C.M.WILMOT JRNL TITL CRYSTAL STRUCTURES FOR METHYLOBACTERIUM EXTORQUENS PQQC FROM JRNL TITL 2 THE CD NATURAL FUSION AND THE C TRUNCATION JRNL REF NOT PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0158 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.51 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 3 NUMBER OF REFLECTIONS : 65610 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.236 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3492 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.06 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3553 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 73.22 REMARK 3 BIN R VALUE (WORKING SET) : 0.2610 REMARK 3 BIN FREE R VALUE SET COUNT : 196 REMARK 3 BIN FREE R VALUE : 0.2880 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6964 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 84 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.11000 REMARK 3 B22 (A**2) : 0.26000 REMARK 3 B33 (A**2) : -1.37000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.176 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.159 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.122 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.516 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.948 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.927 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7151 ; 0.028 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 6430 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9722 ; 2.457 ; 1.938 REMARK 3 BOND ANGLES OTHERS (DEGREES): 14677 ; 1.448 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 893 ; 6.811 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 319 ;32.457 ;22.194 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1045 ;17.105 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 56 ;19.678 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1069 ; 0.241 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 8079 ; 0.014 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1641 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3608 ; 1.978 ; 2.457 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3607 ; 1.978 ; 2.457 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4489 ; 2.829 ; 3.669 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 4490 ; 2.829 ; 3.669 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3543 ; 2.409 ; 2.715 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 3544 ; 2.409 ; 2.715 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 5234 ; 3.606 ; 3.972 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 8284 ; 4.844 ;29.214 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 8278 ; 4.838 ;29.200 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 14 A 257 REMARK 3 ORIGIN FOR THE GROUP (A): -21.9327 9.4469 -31.7764 REMARK 3 T TENSOR REMARK 3 T11: 0.0318 T22: 0.0370 REMARK 3 T33: 0.1425 T12: 0.0226 REMARK 3 T13: -0.0003 T23: 0.0315 REMARK 3 L TENSOR REMARK 3 L11: 0.7907 L22: 1.2018 REMARK 3 L33: 2.0642 L12: 0.2256 REMARK 3 L13: 0.1292 L23: 0.5490 REMARK 3 S TENSOR REMARK 3 S11: 0.0505 S12: 0.0303 S13: 0.1071 REMARK 3 S21: -0.0702 S22: -0.0093 S23: 0.0459 REMARK 3 S31: -0.1908 S32: -0.0961 S33: -0.0412 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 15 B 258 REMARK 3 ORIGIN FOR THE GROUP (A): -37.2294 13.4038 0.6663 REMARK 3 T TENSOR REMARK 3 T11: 0.0326 T22: 0.0861 REMARK 3 T33: 0.1929 T12: 0.0181 REMARK 3 T13: 0.0224 T23: -0.0183 REMARK 3 L TENSOR REMARK 3 L11: 0.5965 L22: 0.6466 REMARK 3 L33: 1.6924 L12: 0.0550 REMARK 3 L13: 0.0222 L23: 0.0053 REMARK 3 S TENSOR REMARK 3 S11: 0.0287 S12: 0.0152 S13: 0.0629 REMARK 3 S21: 0.0167 S22: 0.0067 S23: 0.0284 REMARK 3 S31: -0.2237 S32: -0.1456 S33: -0.0354 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 15 C 258 REMARK 3 ORIGIN FOR THE GROUP (A): -20.5350 -16.8398 -26.8734 REMARK 3 T TENSOR REMARK 3 T11: 0.1116 T22: 0.0030 REMARK 3 T33: 0.1254 T12: 0.0077 REMARK 3 T13: -0.0096 T23: -0.0082 REMARK 3 L TENSOR REMARK 3 L11: 1.1131 L22: 0.9162 REMARK 3 L33: 2.3840 L12: 0.1376 REMARK 3 L13: -0.2562 L23: -0.4302 REMARK 3 S TENSOR REMARK 3 S11: -0.0023 S12: 0.0011 S13: -0.0271 REMARK 3 S21: -0.0944 S22: -0.0245 S23: 0.0361 REMARK 3 S31: 0.4504 S32: 0.0000 S33: 0.0267 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 16 D 258 REMARK 3 ORIGIN FOR THE GROUP (A): -23.0999 -8.8347 8.5129 REMARK 3 T TENSOR REMARK 3 T11: 0.0397 T22: 0.0805 REMARK 3 T33: 0.1389 T12: -0.0082 REMARK 3 T13: 0.0038 T23: 0.0285 REMARK 3 L TENSOR REMARK 3 L11: 1.1186 L22: 0.8071 REMARK 3 L33: 1.5549 L12: 0.1583 REMARK 3 L13: -0.5833 L23: 0.1743 REMARK 3 S TENSOR REMARK 3 S11: -0.0225 S12: -0.0761 S13: -0.0659 REMARK 3 S21: 0.0362 S22: 0.0051 S23: -0.0091 REMARK 3 S31: 0.2223 S32: 0.0706 S33: 0.0175 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5VRC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-MAY-17. REMARK 100 THE DEPOSITION ID IS D_1000227567. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-JUL-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0332 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 69169 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 29.510 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : 0.07700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1OTV REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.61 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.04 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 500 MICROL WELL VOLUMES. DROPS REMARK 280 SUSPENDED ON SILICONIZED GLASS. PROTEIN SOLUTION: 8.0 MG/ML REMARK 280 PROTEIN IN BUFFER (50 MM TRIS, PH 8.0, 200MM SODIUM CHLORIDE). REMARK 280 WELL SOLUTION: 100 MM HEPES, PH 8.07, 200 MM SODIUM CHLORIDE, REMARK 280 AND 23.75% W/V PEG-3350. ALL WATER USED IN WELL SOLUTION BUFFERS REMARK 280 WAS 0.55 MM SODIUM AZIDE FOR FUNGAL GROWTH SUPPRESSION. PROTEIN: REMARK 280 WELL SOLUTION WAS 1:1 (1 MICROL TO 1 MICROL), VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 31.25050 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 72.70150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 57.09250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 72.70150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 31.25050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 57.09250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2060 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19390 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2130 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19850 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -16.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 ALA A 3 REMARK 465 GLN A 4 REMARK 465 PHE A 5 REMARK 465 PRO A 6 REMARK 465 PRO A 7 REMARK 465 PRO A 8 REMARK 465 VAL A 9 REMARK 465 PRO A 10 REMARK 465 ASP A 11 REMARK 465 THR A 12 REMARK 465 GLU A 13 REMARK 465 PRO A 162 REMARK 465 THR A 163 REMARK 465 ILE A 164 REMARK 465 ILE A 165 REMARK 465 SER A 166 REMARK 465 GLU A 167 REMARK 465 ASP A 188 REMARK 465 LYS A 189 REMARK 465 ARG A 190 REMARK 465 LEU A 191 REMARK 465 THR A 192 REMARK 465 GLN A 193 REMARK 465 ALA A 194 REMARK 465 PRO A 195 REMARK 465 ARG A 196 REMARK 465 ASP A 197 REMARK 465 ALA A 198 REMARK 465 VAL A 258 REMARK 465 ALA A 259 REMARK 465 GLU A 260 REMARK 465 MET B -19 REMARK 465 GLY B -18 REMARK 465 SER B -17 REMARK 465 SER B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 SER B -9 REMARK 465 SER B -8 REMARK 465 GLY B -7 REMARK 465 LEU B -6 REMARK 465 VAL B -5 REMARK 465 PRO B -4 REMARK 465 ARG B -3 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 ALA B 3 REMARK 465 GLN B 4 REMARK 465 PHE B 5 REMARK 465 PRO B 6 REMARK 465 PRO B 7 REMARK 465 PRO B 8 REMARK 465 VAL B 9 REMARK 465 PRO B 10 REMARK 465 ASP B 11 REMARK 465 THR B 12 REMARK 465 GLU B 13 REMARK 465 GLN B 14 REMARK 465 THR B 163 REMARK 465 ILE B 164 REMARK 465 ILE B 165 REMARK 465 SER B 166 REMARK 465 GLU B 167 REMARK 465 ARG B 168 REMARK 465 VAL B 169 REMARK 465 ALA B 170 REMARK 465 ARG B 190 REMARK 465 LEU B 191 REMARK 465 THR B 192 REMARK 465 GLN B 193 REMARK 465 ALA B 194 REMARK 465 PRO B 195 REMARK 465 ARG B 196 REMARK 465 ASP B 197 REMARK 465 ALA B 259 REMARK 465 GLU B 260 REMARK 465 MET C -19 REMARK 465 GLY C -18 REMARK 465 SER C -17 REMARK 465 SER C -16 REMARK 465 HIS C -15 REMARK 465 HIS C -14 REMARK 465 HIS C -13 REMARK 465 HIS C -12 REMARK 465 HIS C -11 REMARK 465 HIS C -10 REMARK 465 SER C -9 REMARK 465 SER C -8 REMARK 465 GLY C -7 REMARK 465 LEU C -6 REMARK 465 VAL C -5 REMARK 465 PRO C -4 REMARK 465 ARG C -3 REMARK 465 GLY C -2 REMARK 465 SER C -1 REMARK 465 HIS C 0 REMARK 465 MET C 1 REMARK 465 THR C 2 REMARK 465 ALA C 3 REMARK 465 GLN C 4 REMARK 465 PHE C 5 REMARK 465 PRO C 6 REMARK 465 PRO C 7 REMARK 465 PRO C 8 REMARK 465 VAL C 9 REMARK 465 PRO C 10 REMARK 465 ASP C 11 REMARK 465 THR C 12 REMARK 465 GLU C 13 REMARK 465 GLN C 14 REMARK 465 PRO C 162 REMARK 465 THR C 163 REMARK 465 ILE C 164 REMARK 465 ILE C 165 REMARK 465 SER C 166 REMARK 465 GLU C 167 REMARK 465 ARG C 168 REMARK 465 GLY C 171 REMARK 465 LYS C 189 REMARK 465 ARG C 190 REMARK 465 LEU C 191 REMARK 465 THR C 192 REMARK 465 GLN C 193 REMARK 465 ALA C 194 REMARK 465 PRO C 195 REMARK 465 ARG C 196 REMARK 465 ASP C 197 REMARK 465 ALA C 198 REMARK 465 ALA C 259 REMARK 465 GLU C 260 REMARK 465 MET D -19 REMARK 465 GLY D -18 REMARK 465 SER D -17 REMARK 465 SER D -16 REMARK 465 HIS D -15 REMARK 465 HIS D -14 REMARK 465 HIS D -13 REMARK 465 HIS D -12 REMARK 465 HIS D -11 REMARK 465 HIS D -10 REMARK 465 SER D -9 REMARK 465 SER D -8 REMARK 465 GLY D -7 REMARK 465 LEU D -6 REMARK 465 VAL D -5 REMARK 465 PRO D -4 REMARK 465 ARG D -3 REMARK 465 GLY D -2 REMARK 465 SER D -1 REMARK 465 HIS D 0 REMARK 465 MET D 1 REMARK 465 THR D 2 REMARK 465 ALA D 3 REMARK 465 GLN D 4 REMARK 465 PHE D 5 REMARK 465 PRO D 6 REMARK 465 PRO D 7 REMARK 465 PRO D 8 REMARK 465 VAL D 9 REMARK 465 PRO D 10 REMARK 465 ASP D 11 REMARK 465 THR D 12 REMARK 465 GLU D 13 REMARK 465 GLN D 14 REMARK 465 ARG D 15 REMARK 465 THR D 157 REMARK 465 GLU D 158 REMARK 465 MET D 159 REMARK 465 PHE D 160 REMARK 465 SER D 161 REMARK 465 PRO D 162 REMARK 465 THR D 163 REMARK 465 ILE D 164 REMARK 465 ILE D 165 REMARK 465 SER D 166 REMARK 465 GLU D 167 REMARK 465 LYS D 189 REMARK 465 ARG D 190 REMARK 465 LEU D 191 REMARK 465 THR D 192 REMARK 465 GLN D 193 REMARK 465 ALA D 194 REMARK 465 PRO D 195 REMARK 465 ARG D 196 REMARK 465 ASP D 197 REMARK 465 ALA D 259 REMARK 465 GLU D 260 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 14 CG CD OE1 NE2 REMARK 470 GLU A 20 CG CD OE1 OE2 REMARK 470 ARG A 32 CD NE CZ NH1 NH2 REMARK 470 ARG A 33 NE CZ NH1 NH2 REMARK 470 LYS A 51 NZ REMARK 470 GLN A 83 CG CD OE1 NE2 REMARK 470 ASP A 98 CG OD1 OD2 REMARK 470 HIS A 99 CG ND1 CD2 CE1 NE2 REMARK 470 GLU A 100 CG CD OE1 OE2 REMARK 470 LEU A 109 CG CD1 CD2 REMARK 470 LYS A 110 CG CD CE NZ REMARK 470 ASP A 120 CG OD1 OD2 REMARK 470 LYS A 126 CD CE NZ REMARK 470 GLU A 158 CG CD OE1 OE2 REMARK 470 SER A 161 OG REMARK 470 ARG A 168 CG CD NE CZ NH1 NH2 REMARK 470 ALA A 170 CB REMARK 470 LYS A 174 CG CD CE NZ REMARK 470 ASP A 177 CG OD1 OD2 REMARK 470 THR A 180 OG1 CG2 REMARK 470 LYS A 181 CB CG CD CE NZ REMARK 470 ASP A 182 CB CG OD1 OD2 REMARK 470 THR A 183 OG1 CG2 REMARK 470 LEU A 184 CG CD1 CD2 REMARK 470 ALA A 185 CB REMARK 470 TYR A 186 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ASP A 199 CG OD1 OD2 REMARK 470 GLU A 213 CG CD OE1 OE2 REMARK 470 ARG A 216 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 42 CD NE CZ NH1 NH2 REMARK 470 LYS B 48 CE NZ REMARK 470 GLN B 83 CG CD OE1 NE2 REMARK 470 ILE B 105 CG1 CG2 CD1 REMARK 470 LYS B 110 CD CE NZ REMARK 470 ASP B 120 CG OD1 OD2 REMARK 470 LYS B 126 CG CD CE NZ REMARK 470 LYS B 174 CD CE NZ REMARK 470 ASP B 182 CG OD1 OD2 REMARK 470 LEU B 184 CG CD1 CD2 REMARK 470 ALA B 185 CB REMARK 470 ASP B 188 CG OD1 OD2 REMARK 470 LYS B 189 CG CD CE NZ REMARK 470 ASP B 199 CG OD1 OD2 REMARK 470 ARG B 207 NE CZ NH1 NH2 REMARK 470 GLU B 213 CG CD OE1 OE2 REMARK 470 VAL B 258 CG1 CG2 REMARK 470 ARG C 15 CG CD NE CZ NH1 NH2 REMARK 470 LEU C 16 CG CD1 CD2 REMARK 470 LEU C 17 CG CD1 CD2 REMARK 470 GLU C 20 CG CD OE1 OE2 REMARK 470 ALA C 31 CB REMARK 470 ARG C 32 CG CD NE CZ NH1 NH2 REMARK 470 ARG C 33 CZ NH1 NH2 REMARK 470 ARG C 42 CD NE CZ NH1 NH2 REMARK 470 LYS C 48 CE NZ REMARK 470 LYS C 51 CG CD CE NZ REMARK 470 ARG C 78 CD NE CZ NH1 NH2 REMARK 470 GLN C 83 CG CD OE1 NE2 REMARK 470 GLU C 100 CG CD OE1 OE2 REMARK 470 LYS C 110 CE NZ REMARK 470 LEU C 111 CG CD1 CD2 REMARK 470 ASP C 120 CG OD1 OD2 REMARK 470 LYS C 126 CG CD CE NZ REMARK 470 ARG C 146 CZ NH1 NH2 REMARK 470 GLU C 158 CG CD OE1 OE2 REMARK 470 ALA C 170 CB REMARK 470 LYS C 174 CB CG CD CE NZ REMARK 470 ASP C 177 CG OD1 OD2 REMARK 470 ILE C 179 CG1 CG2 CD1 REMARK 470 LYS C 181 CG CD CE NZ REMARK 470 ASP C 182 CG OD1 OD2 REMARK 470 LEU C 184 CG CD1 CD2 REMARK 470 ASP C 188 CB CG OD1 OD2 REMARK 470 ASP C 199 CG OD1 OD2 REMARK 470 ASP C 203 CG OD1 OD2 REMARK 470 ARG C 207 CG CD NE CZ NH1 NH2 REMARK 470 ALA C 209 CB REMARK 470 THR C 210 OG1 CG2 REMARK 470 GLU C 213 CB CG CD OE1 OE2 REMARK 470 ARG C 216 CG CD NE CZ NH1 NH2 REMARK 470 GLU D 20 CG CD OE1 OE2 REMARK 470 ARG D 32 NE CZ NH1 NH2 REMARK 470 LYS D 48 CE NZ REMARK 470 LYS D 51 CD CE NZ REMARK 470 GLN D 83 CD OE1 NE2 REMARK 470 GLN D 90 CG CD OE1 NE2 REMARK 470 GLU D 100 CG CD OE1 OE2 REMARK 470 LYS D 110 CD CE NZ REMARK 470 ASP D 120 CG OD1 OD2 REMARK 470 LYS D 126 CG CD CE NZ REMARK 470 ARG D 168 CG CD NE CZ NH1 NH2 REMARK 470 VAL D 169 CG1 CG2 REMARK 470 LYS D 174 CB CG CD CE NZ REMARK 470 ASN D 175 CG OD1 ND2 REMARK 470 LYS D 181 CG CD CE NZ REMARK 470 ASP D 188 CG OD1 OD2 REMARK 470 ASP D 199 CG OD1 OD2 REMARK 470 ASP D 203 CG OD1 OD2 REMARK 470 GLU D 213 CG CD OE1 OE2 REMARK 470 ARG D 216 CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 SER A 130 CB SER A 130 OG -0.082 REMARK 500 SER B 144 CA SER B 144 CB 0.162 REMARK 500 THR B 231 CB THR B 231 CG2 -0.224 REMARK 500 GLY B 244 C GLY B 244 O -0.101 REMARK 500 THR C 132 CB THR C 132 CG2 -0.203 REMARK 500 LYS D 126 C LYS D 126 O 0.120 REMARK 500 THR D 132 CB THR D 132 CG2 -0.293 REMARK 500 ASP D 249 N ASP D 249 CA 0.136 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 27 NE - CZ - NH1 ANGL. DEV. = 4.6 DEGREES REMARK 500 ARG A 27 NE - CZ - NH2 ANGL. DEV. = -3.7 DEGREES REMARK 500 ARG A 61 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG A 61 NE - CZ - NH2 ANGL. DEV. = -3.7 DEGREES REMARK 500 ARG A 78 NE - CZ - NH1 ANGL. DEV. = 4.1 DEGREES REMARK 500 ARG A 78 NE - CZ - NH2 ANGL. DEV. = -4.5 DEGREES REMARK 500 ARG A 89 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 ARG A 89 NE - CZ - NH2 ANGL. DEV. = -4.0 DEGREES REMARK 500 ARG A 107 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 ASP A 137 CB - CG - OD1 ANGL. DEV. = 5.7 DEGREES REMARK 500 ARG A 146 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG A 146 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 MET A 172 CG - SD - CE ANGL. DEV. = 9.8 DEGREES REMARK 500 ASP A 203 CB - CG - OD1 ANGL. DEV. = 7.0 DEGREES REMARK 500 LEU A 233 CB - CG - CD1 ANGL. DEV. = 14.8 DEGREES REMARK 500 LEU A 236 CA - CB - CG ANGL. DEV. = 18.5 DEGREES REMARK 500 ARG B 15 NE - CZ - NH1 ANGL. DEV. = -4.2 DEGREES REMARK 500 ARG B 15 NE - CZ - NH2 ANGL. DEV. = 3.6 DEGREES REMARK 500 ARG B 27 NE - CZ - NH1 ANGL. DEV. = 5.0 DEGREES REMARK 500 ARG B 27 NE - CZ - NH2 ANGL. DEV. = -5.4 DEGREES REMARK 500 ARG B 78 CG - CD - NE ANGL. DEV. = -13.1 DEGREES REMARK 500 ARG B 78 CD - NE - CZ ANGL. DEV. = 10.6 DEGREES REMARK 500 ARG B 78 NE - CZ - NH1 ANGL. DEV. = 7.8 DEGREES REMARK 500 ARG B 78 NE - CZ - NH2 ANGL. DEV. = -10.1 DEGREES REMARK 500 ARG B 85 NE - CZ - NH2 ANGL. DEV. = -3.7 DEGREES REMARK 500 ARG B 86 NE - CZ - NH1 ANGL. DEV. = 4.7 DEGREES REMARK 500 ARG B 86 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 ARG B 89 NE - CZ - NH1 ANGL. DEV. = 5.6 DEGREES REMARK 500 ARG B 89 NE - CZ - NH2 ANGL. DEV. = -5.7 DEGREES REMARK 500 ASP B 137 CB - CG - OD1 ANGL. DEV. = 6.7 DEGREES REMARK 500 ASP B 177 CB - CG - OD1 ANGL. DEV. = 5.8 DEGREES REMARK 500 LEU B 233 CB - CG - CD1 ANGL. DEV. = 16.1 DEGREES REMARK 500 ARG C 55 NE - CZ - NH2 ANGL. DEV. = -4.3 DEGREES REMARK 500 ARG C 61 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG C 89 NE - CZ - NH1 ANGL. DEV. = 6.7 DEGREES REMARK 500 ARG C 89 NE - CZ - NH2 ANGL. DEV. = -6.9 DEGREES REMARK 500 GLY C 104 C - N - CA ANGL. DEV. = -22.4 DEGREES REMARK 500 ASP C 137 CB - CG - OD2 ANGL. DEV. = -5.9 DEGREES REMARK 500 LEU C 229 CB - CG - CD1 ANGL. DEV. = 13.2 DEGREES REMARK 500 LEU C 233 CB - CG - CD1 ANGL. DEV. = 15.1 DEGREES REMARK 500 VAL C 241 CG1 - CB - CG2 ANGL. DEV. = 11.4 DEGREES REMARK 500 ASP C 249 CB - CG - OD1 ANGL. DEV. = 5.6 DEGREES REMARK 500 ARG D 27 CG - CD - NE ANGL. DEV. = -13.8 DEGREES REMARK 500 ARG D 27 NE - CZ - NH2 ANGL. DEV. = -4.3 DEGREES REMARK 500 ARG D 33 NE - CZ - NH2 ANGL. DEV. = -4.1 DEGREES REMARK 500 ASP D 46 CB - CG - OD1 ANGL. DEV. = 5.7 DEGREES REMARK 500 ARG D 55 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 ARG D 55 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 ARG D 78 CD - NE - CZ ANGL. DEV. = 11.7 DEGREES REMARK 500 ARG D 78 NE - CZ - NH1 ANGL. DEV. = 6.6 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 61 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 156 6.78 -68.98 REMARK 500 PRO A 253 127.53 -36.84 REMARK 500 VAL B 241 -64.54 -109.98 REMARK 500 ASP B 249 -35.52 92.05 REMARK 500 LEU B 257 -164.65 -103.34 REMARK 500 LEU C 184 -54.64 -29.65 REMARK 500 LYS D 174 -27.53 -31.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLY C 104 ILE C 105 143.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG D 78 0.12 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5VRD RELATED DB: PDB DBREF 5VRC A 1 260 UNP Q49150 PQQCD_METEA 1 260 DBREF 5VRC B 1 260 UNP Q49150 PQQCD_METEA 1 260 DBREF 5VRC C 1 260 UNP Q49150 PQQCD_METEA 1 260 DBREF 5VRC D 1 260 UNP Q49150 PQQCD_METEA 1 260 SEQADV 5VRC MET A -19 UNP Q49150 INITIATING METHIONINE SEQADV 5VRC GLY A -18 UNP Q49150 EXPRESSION TAG SEQADV 5VRC SER A -17 UNP Q49150 EXPRESSION TAG SEQADV 5VRC SER A -16 UNP Q49150 EXPRESSION TAG SEQADV 5VRC HIS A -15 UNP Q49150 EXPRESSION TAG SEQADV 5VRC HIS A -14 UNP Q49150 EXPRESSION TAG SEQADV 5VRC HIS A -13 UNP Q49150 EXPRESSION TAG SEQADV 5VRC HIS A -12 UNP Q49150 EXPRESSION TAG SEQADV 5VRC HIS A -11 UNP Q49150 EXPRESSION TAG SEQADV 5VRC HIS A -10 UNP Q49150 EXPRESSION TAG SEQADV 5VRC SER A -9 UNP Q49150 EXPRESSION TAG SEQADV 5VRC SER A -8 UNP Q49150 EXPRESSION TAG SEQADV 5VRC GLY A -7 UNP Q49150 EXPRESSION TAG SEQADV 5VRC LEU A -6 UNP Q49150 EXPRESSION TAG SEQADV 5VRC VAL A -5 UNP Q49150 EXPRESSION TAG SEQADV 5VRC PRO A -4 UNP Q49150 EXPRESSION TAG SEQADV 5VRC ARG A -3 UNP Q49150 EXPRESSION TAG SEQADV 5VRC GLY A -2 UNP Q49150 EXPRESSION TAG SEQADV 5VRC SER A -1 UNP Q49150 EXPRESSION TAG SEQADV 5VRC HIS A 0 UNP Q49150 EXPRESSION TAG SEQADV 5VRC MET B -19 UNP Q49150 INITIATING METHIONINE SEQADV 5VRC GLY B -18 UNP Q49150 EXPRESSION TAG SEQADV 5VRC SER B -17 UNP Q49150 EXPRESSION TAG SEQADV 5VRC SER B -16 UNP Q49150 EXPRESSION TAG SEQADV 5VRC HIS B -15 UNP Q49150 EXPRESSION TAG SEQADV 5VRC HIS B -14 UNP Q49150 EXPRESSION TAG SEQADV 5VRC HIS B -13 UNP Q49150 EXPRESSION TAG SEQADV 5VRC HIS B -12 UNP Q49150 EXPRESSION TAG SEQADV 5VRC HIS B -11 UNP Q49150 EXPRESSION TAG SEQADV 5VRC HIS B -10 UNP Q49150 EXPRESSION TAG SEQADV 5VRC SER B -9 UNP Q49150 EXPRESSION TAG SEQADV 5VRC SER B -8 UNP Q49150 EXPRESSION TAG SEQADV 5VRC GLY B -7 UNP Q49150 EXPRESSION TAG SEQADV 5VRC LEU B -6 UNP Q49150 EXPRESSION TAG SEQADV 5VRC VAL B -5 UNP Q49150 EXPRESSION TAG SEQADV 5VRC PRO B -4 UNP Q49150 EXPRESSION TAG SEQADV 5VRC ARG B -3 UNP Q49150 EXPRESSION TAG SEQADV 5VRC GLY B -2 UNP Q49150 EXPRESSION TAG SEQADV 5VRC SER B -1 UNP Q49150 EXPRESSION TAG SEQADV 5VRC HIS B 0 UNP Q49150 EXPRESSION TAG SEQADV 5VRC MET C -19 UNP Q49150 INITIATING METHIONINE SEQADV 5VRC GLY C -18 UNP Q49150 EXPRESSION TAG SEQADV 5VRC SER C -17 UNP Q49150 EXPRESSION TAG SEQADV 5VRC SER C -16 UNP Q49150 EXPRESSION TAG SEQADV 5VRC HIS C -15 UNP Q49150 EXPRESSION TAG SEQADV 5VRC HIS C -14 UNP Q49150 EXPRESSION TAG SEQADV 5VRC HIS C -13 UNP Q49150 EXPRESSION TAG SEQADV 5VRC HIS C -12 UNP Q49150 EXPRESSION TAG SEQADV 5VRC HIS C -11 UNP Q49150 EXPRESSION TAG SEQADV 5VRC HIS C -10 UNP Q49150 EXPRESSION TAG SEQADV 5VRC SER C -9 UNP Q49150 EXPRESSION TAG SEQADV 5VRC SER C -8 UNP Q49150 EXPRESSION TAG SEQADV 5VRC GLY C -7 UNP Q49150 EXPRESSION TAG SEQADV 5VRC LEU C -6 UNP Q49150 EXPRESSION TAG SEQADV 5VRC VAL C -5 UNP Q49150 EXPRESSION TAG SEQADV 5VRC PRO C -4 UNP Q49150 EXPRESSION TAG SEQADV 5VRC ARG C -3 UNP Q49150 EXPRESSION TAG SEQADV 5VRC GLY C -2 UNP Q49150 EXPRESSION TAG SEQADV 5VRC SER C -1 UNP Q49150 EXPRESSION TAG SEQADV 5VRC HIS C 0 UNP Q49150 EXPRESSION TAG SEQADV 5VRC MET D -19 UNP Q49150 INITIATING METHIONINE SEQADV 5VRC GLY D -18 UNP Q49150 EXPRESSION TAG SEQADV 5VRC SER D -17 UNP Q49150 EXPRESSION TAG SEQADV 5VRC SER D -16 UNP Q49150 EXPRESSION TAG SEQADV 5VRC HIS D -15 UNP Q49150 EXPRESSION TAG SEQADV 5VRC HIS D -14 UNP Q49150 EXPRESSION TAG SEQADV 5VRC HIS D -13 UNP Q49150 EXPRESSION TAG SEQADV 5VRC HIS D -12 UNP Q49150 EXPRESSION TAG SEQADV 5VRC HIS D -11 UNP Q49150 EXPRESSION TAG SEQADV 5VRC HIS D -10 UNP Q49150 EXPRESSION TAG SEQADV 5VRC SER D -9 UNP Q49150 EXPRESSION TAG SEQADV 5VRC SER D -8 UNP Q49150 EXPRESSION TAG SEQADV 5VRC GLY D -7 UNP Q49150 EXPRESSION TAG SEQADV 5VRC LEU D -6 UNP Q49150 EXPRESSION TAG SEQADV 5VRC VAL D -5 UNP Q49150 EXPRESSION TAG SEQADV 5VRC PRO D -4 UNP Q49150 EXPRESSION TAG SEQADV 5VRC ARG D -3 UNP Q49150 EXPRESSION TAG SEQADV 5VRC GLY D -2 UNP Q49150 EXPRESSION TAG SEQADV 5VRC SER D -1 UNP Q49150 EXPRESSION TAG SEQADV 5VRC HIS D 0 UNP Q49150 EXPRESSION TAG SEQRES 1 A 280 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 280 LEU VAL PRO ARG GLY SER HIS MET THR ALA GLN PHE PRO SEQRES 3 A 280 PRO PRO VAL PRO ASP THR GLU GLN ARG LEU LEU SER HIS SEQRES 4 A 280 GLU GLU LEU GLU ALA ALA LEU ARG ASP ILE GLY ALA ARG SEQRES 5 A 280 ARG TYR HIS ASN LEU HIS PRO PHE HIS ARG LEU LEU HIS SEQRES 6 A 280 ASP GLY LYS LEU SER LYS ASP GLN VAL ARG ALA TRP ALA SEQRES 7 A 280 LEU ASN ARG TYR TYR TYR GLN ALA MET ILE PRO VAL LYS SEQRES 8 A 280 ASP ALA ALA LEU LEU ALA ARG LEU PRO ASP ALA GLN LEU SEQRES 9 A 280 ARG ARG ILE TRP ARG GLN ARG ILE VAL ASP HIS ASP GLY SEQRES 10 A 280 ASP HIS GLU GLY ASP GLY GLY ILE GLU ARG TRP LEU LYS SEQRES 11 A 280 LEU ALA GLU GLY VAL GLY PHE THR ARG ASP TYR VAL LEU SEQRES 12 A 280 SER THR LYS GLY ILE LEU SER ALA THR ARG PHE SER VAL SEQRES 13 A 280 ASP ALA TYR VAL HIS PHE VAL SER GLU ARG SER LEU LEU SEQRES 14 A 280 GLU ALA ILE ALA SER SER LEU THR GLU MET PHE SER PRO SEQRES 15 A 280 THR ILE ILE SER GLU ARG VAL ALA GLY MET LEU LYS ASN SEQRES 16 A 280 TYR ASP PHE ILE THR LYS ASP THR LEU ALA TYR PHE ASP SEQRES 17 A 280 LYS ARG LEU THR GLN ALA PRO ARG ASP ALA ASP PHE ALA SEQRES 18 A 280 LEU ASP TYR VAL LYS ARG HIS ALA THR THR PRO GLU MET SEQRES 19 A 280 GLN ARG ALA ALA ILE ASP ALA LEU THR PHE LYS CYS ASN SEQRES 20 A 280 VAL LEU TRP THR GLN LEU ASP ALA LEU TYR PHE ALA TYR SEQRES 21 A 280 VAL ALA PRO GLY MET VAL PRO PRO ASP ALA TRP GLN PRO SEQRES 22 A 280 GLY GLU GLY LEU VAL ALA GLU SEQRES 1 B 280 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 280 LEU VAL PRO ARG GLY SER HIS MET THR ALA GLN PHE PRO SEQRES 3 B 280 PRO PRO VAL PRO ASP THR GLU GLN ARG LEU LEU SER HIS SEQRES 4 B 280 GLU GLU LEU GLU ALA ALA LEU ARG ASP ILE GLY ALA ARG SEQRES 5 B 280 ARG TYR HIS ASN LEU HIS PRO PHE HIS ARG LEU LEU HIS SEQRES 6 B 280 ASP GLY LYS LEU SER LYS ASP GLN VAL ARG ALA TRP ALA SEQRES 7 B 280 LEU ASN ARG TYR TYR TYR GLN ALA MET ILE PRO VAL LYS SEQRES 8 B 280 ASP ALA ALA LEU LEU ALA ARG LEU PRO ASP ALA GLN LEU SEQRES 9 B 280 ARG ARG ILE TRP ARG GLN ARG ILE VAL ASP HIS ASP GLY SEQRES 10 B 280 ASP HIS GLU GLY ASP GLY GLY ILE GLU ARG TRP LEU LYS SEQRES 11 B 280 LEU ALA GLU GLY VAL GLY PHE THR ARG ASP TYR VAL LEU SEQRES 12 B 280 SER THR LYS GLY ILE LEU SER ALA THR ARG PHE SER VAL SEQRES 13 B 280 ASP ALA TYR VAL HIS PHE VAL SER GLU ARG SER LEU LEU SEQRES 14 B 280 GLU ALA ILE ALA SER SER LEU THR GLU MET PHE SER PRO SEQRES 15 B 280 THR ILE ILE SER GLU ARG VAL ALA GLY MET LEU LYS ASN SEQRES 16 B 280 TYR ASP PHE ILE THR LYS ASP THR LEU ALA TYR PHE ASP SEQRES 17 B 280 LYS ARG LEU THR GLN ALA PRO ARG ASP ALA ASP PHE ALA SEQRES 18 B 280 LEU ASP TYR VAL LYS ARG HIS ALA THR THR PRO GLU MET SEQRES 19 B 280 GLN ARG ALA ALA ILE ASP ALA LEU THR PHE LYS CYS ASN SEQRES 20 B 280 VAL LEU TRP THR GLN LEU ASP ALA LEU TYR PHE ALA TYR SEQRES 21 B 280 VAL ALA PRO GLY MET VAL PRO PRO ASP ALA TRP GLN PRO SEQRES 22 B 280 GLY GLU GLY LEU VAL ALA GLU SEQRES 1 C 280 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 C 280 LEU VAL PRO ARG GLY SER HIS MET THR ALA GLN PHE PRO SEQRES 3 C 280 PRO PRO VAL PRO ASP THR GLU GLN ARG LEU LEU SER HIS SEQRES 4 C 280 GLU GLU LEU GLU ALA ALA LEU ARG ASP ILE GLY ALA ARG SEQRES 5 C 280 ARG TYR HIS ASN LEU HIS PRO PHE HIS ARG LEU LEU HIS SEQRES 6 C 280 ASP GLY LYS LEU SER LYS ASP GLN VAL ARG ALA TRP ALA SEQRES 7 C 280 LEU ASN ARG TYR TYR TYR GLN ALA MET ILE PRO VAL LYS SEQRES 8 C 280 ASP ALA ALA LEU LEU ALA ARG LEU PRO ASP ALA GLN LEU SEQRES 9 C 280 ARG ARG ILE TRP ARG GLN ARG ILE VAL ASP HIS ASP GLY SEQRES 10 C 280 ASP HIS GLU GLY ASP GLY GLY ILE GLU ARG TRP LEU LYS SEQRES 11 C 280 LEU ALA GLU GLY VAL GLY PHE THR ARG ASP TYR VAL LEU SEQRES 12 C 280 SER THR LYS GLY ILE LEU SER ALA THR ARG PHE SER VAL SEQRES 13 C 280 ASP ALA TYR VAL HIS PHE VAL SER GLU ARG SER LEU LEU SEQRES 14 C 280 GLU ALA ILE ALA SER SER LEU THR GLU MET PHE SER PRO SEQRES 15 C 280 THR ILE ILE SER GLU ARG VAL ALA GLY MET LEU LYS ASN SEQRES 16 C 280 TYR ASP PHE ILE THR LYS ASP THR LEU ALA TYR PHE ASP SEQRES 17 C 280 LYS ARG LEU THR GLN ALA PRO ARG ASP ALA ASP PHE ALA SEQRES 18 C 280 LEU ASP TYR VAL LYS ARG HIS ALA THR THR PRO GLU MET SEQRES 19 C 280 GLN ARG ALA ALA ILE ASP ALA LEU THR PHE LYS CYS ASN SEQRES 20 C 280 VAL LEU TRP THR GLN LEU ASP ALA LEU TYR PHE ALA TYR SEQRES 21 C 280 VAL ALA PRO GLY MET VAL PRO PRO ASP ALA TRP GLN PRO SEQRES 22 C 280 GLY GLU GLY LEU VAL ALA GLU SEQRES 1 D 280 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 D 280 LEU VAL PRO ARG GLY SER HIS MET THR ALA GLN PHE PRO SEQRES 3 D 280 PRO PRO VAL PRO ASP THR GLU GLN ARG LEU LEU SER HIS SEQRES 4 D 280 GLU GLU LEU GLU ALA ALA LEU ARG ASP ILE GLY ALA ARG SEQRES 5 D 280 ARG TYR HIS ASN LEU HIS PRO PHE HIS ARG LEU LEU HIS SEQRES 6 D 280 ASP GLY LYS LEU SER LYS ASP GLN VAL ARG ALA TRP ALA SEQRES 7 D 280 LEU ASN ARG TYR TYR TYR GLN ALA MET ILE PRO VAL LYS SEQRES 8 D 280 ASP ALA ALA LEU LEU ALA ARG LEU PRO ASP ALA GLN LEU SEQRES 9 D 280 ARG ARG ILE TRP ARG GLN ARG ILE VAL ASP HIS ASP GLY SEQRES 10 D 280 ASP HIS GLU GLY ASP GLY GLY ILE GLU ARG TRP LEU LYS SEQRES 11 D 280 LEU ALA GLU GLY VAL GLY PHE THR ARG ASP TYR VAL LEU SEQRES 12 D 280 SER THR LYS GLY ILE LEU SER ALA THR ARG PHE SER VAL SEQRES 13 D 280 ASP ALA TYR VAL HIS PHE VAL SER GLU ARG SER LEU LEU SEQRES 14 D 280 GLU ALA ILE ALA SER SER LEU THR GLU MET PHE SER PRO SEQRES 15 D 280 THR ILE ILE SER GLU ARG VAL ALA GLY MET LEU LYS ASN SEQRES 16 D 280 TYR ASP PHE ILE THR LYS ASP THR LEU ALA TYR PHE ASP SEQRES 17 D 280 LYS ARG LEU THR GLN ALA PRO ARG ASP ALA ASP PHE ALA SEQRES 18 D 280 LEU ASP TYR VAL LYS ARG HIS ALA THR THR PRO GLU MET SEQRES 19 D 280 GLN ARG ALA ALA ILE ASP ALA LEU THR PHE LYS CYS ASN SEQRES 20 D 280 VAL LEU TRP THR GLN LEU ASP ALA LEU TYR PHE ALA TYR SEQRES 21 D 280 VAL ALA PRO GLY MET VAL PRO PRO ASP ALA TRP GLN PRO SEQRES 22 D 280 GLY GLU GLY LEU VAL ALA GLU FORMUL 5 HOH *84(H2 O) HELIX 1 AA1 SER A 18 TYR A 34 1 17 HELIX 2 AA2 HIS A 35 LEU A 37 5 3 HELIX 3 AA3 HIS A 38 ASP A 46 1 9 HELIX 4 AA4 SER A 50 ALA A 77 1 28 HELIX 5 AA5 ASP A 81 GLY A 97 1 17 HELIX 6 AA6 GLY A 103 VAL A 115 1 13 HELIX 7 AA7 THR A 118 THR A 125 1 8 HELIX 8 AA8 LEU A 129 ARG A 146 1 18 HELIX 9 AA9 SER A 147 SER A 154 1 8 HELIX 10 AB1 SER A 155 SER A 161 5 7 HELIX 11 AB2 VAL A 169 LYS A 174 1 6 HELIX 12 AB3 THR A 180 TYR A 186 1 7 HELIX 13 AB4 PHE A 200 ALA A 209 1 10 HELIX 14 AB5 THR A 211 VAL A 241 1 31 HELIX 15 AB6 SER B 18 TYR B 34 1 17 HELIX 16 AB7 HIS B 35 LEU B 37 5 3 HELIX 17 AB8 HIS B 38 ASP B 46 1 9 HELIX 18 AB9 SER B 50 ALA B 77 1 28 HELIX 19 AC1 ASP B 81 GLY B 97 1 17 HELIX 20 AC2 ILE B 105 VAL B 115 1 11 HELIX 21 AC3 THR B 118 THR B 125 1 8 HELIX 22 AC4 LEU B 129 ARG B 146 1 18 HELIX 23 AC5 SER B 147 SER B 154 1 8 HELIX 24 AC6 SER B 155 SER B 161 5 7 HELIX 25 AC7 MET B 172 TYR B 176 5 5 HELIX 26 AC8 THR B 180 LYS B 189 1 10 HELIX 27 AC9 ASP B 199 ALA B 209 1 11 HELIX 28 AD1 THR B 211 VAL B 241 1 31 HELIX 29 AD2 SER C 18 TYR C 34 1 17 HELIX 30 AD3 HIS C 35 LEU C 37 5 3 HELIX 31 AD4 HIS C 38 ASP C 46 1 9 HELIX 32 AD5 SER C 50 ARG C 78 1 29 HELIX 33 AD6 ASP C 81 GLY C 97 1 17 HELIX 34 AD7 ILE C 105 VAL C 115 1 11 HELIX 35 AD8 THR C 118 THR C 125 1 8 HELIX 36 AD9 LEU C 129 ARG C 146 1 18 HELIX 37 AE1 SER C 147 SER C 154 1 8 HELIX 38 AE2 SER C 155 SER C 161 5 7 HELIX 39 AE3 MET C 172 TYR C 176 5 5 HELIX 40 AE4 THR C 180 PHE C 187 1 8 HELIX 41 AE5 PHE C 200 ALA C 209 1 10 HELIX 42 AE6 THR C 211 VAL C 241 1 31 HELIX 43 AE7 SER D 18 ARG D 33 1 16 HELIX 44 AE8 TYR D 34 LEU D 37 5 4 HELIX 45 AE9 HIS D 38 ASP D 46 1 9 HELIX 46 AF1 SER D 50 ARG D 78 1 29 HELIX 47 AF2 ASP D 81 GLY D 97 1 17 HELIX 48 AF3 ILE D 105 VAL D 115 1 11 HELIX 49 AF4 THR D 118 THR D 125 1 8 HELIX 50 AF5 LEU D 129 ARG D 146 1 18 HELIX 51 AF6 SER D 147 SER D 154 1 8 HELIX 52 AF7 VAL D 169 LYS D 174 1 6 HELIX 53 AF8 THR D 180 TYR D 186 1 7 HELIX 54 AF9 ASP D 199 ALA D 209 1 11 HELIX 55 AG1 THR D 211 VAL D 241 1 31 CISPEP 1 ALA A 242 PRO A 243 0 1.84 CISPEP 2 ALA B 242 PRO B 243 0 5.14 CISPEP 3 ALA C 242 PRO C 243 0 6.09 CISPEP 4 ALA D 242 PRO D 243 0 10.11 CRYST1 62.501 114.185 145.403 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016000 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008758 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006877 0.00000