HEADER TRANSCRIPTION 27-JAN-17 5MYT TITLE STRUCTURE OF TRANSCRIPTIONAL REGULATORY REPRESSOR PROTEIN - ETHR FROM TITLE 2 MYCOBACTERIUM TUBERCULOSIS IN COMPLEX WITH COMPOUND GSK921295A AT TITLE 3 1.61A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: HTH-TYPE TRANSCRIPTIONAL REGULATOR ETHR; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 83332; SOURCE 4 STRAIN: ATCC 25618 / H37RV; SOURCE 5 GENE: ETHR, ETAR, RV3855; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS ETHR, MYCOBACTERIUM TUBERCULOSIS, TRANSCRIPTION, REPRESSOR EXPDTA X-RAY DIFFRACTION AUTHOR M.BLASZCZYK,V.MENDES,G.MUGUMBATE,T.L.BLUNDELL REVDAT 2 17-JAN-24 5MYT 1 JRNL REVDAT 1 25-OCT-17 5MYT 0 JRNL AUTH G.MUGUMBATE,V.MENDES,M.BLASZCZYK,M.SABBAH,G.PAPADATOS, JRNL AUTH 2 J.LELIEVRE,L.BALLELL,D.BARROS,C.ABELL,T.L.BLUNDELL, JRNL AUTH 3 J.P.OVERINGTON JRNL TITL TARGET IDENTIFICATION OF MYCOBACTERIUM TUBERCULOSIS JRNL TITL 2 PHENOTYPIC HITS USING A CONCERTED CHEMOGENOMIC, BIOPHYSICAL, JRNL TITL 3 AND STRUCTURAL APPROACH. JRNL REF FRONT PHARMACOL V. 8 681 2017 JRNL REFN ESSN 1663-9812 JRNL PMID 29018348 JRNL DOI 10.3389/FPHAR.2017.00681 REMARK 2 REMARK 2 RESOLUTION. 1.61 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.61 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.32 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 3 NUMBER OF REFLECTIONS : 32185 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.168 REMARK 3 FREE R VALUE : 0.179 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 1623 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.3272 - 3.6857 1.00 2831 151 0.1637 0.1707 REMARK 3 2 3.6857 - 2.9258 1.00 2698 132 0.1684 0.1634 REMARK 3 3 2.9258 - 2.5560 1.00 2624 159 0.1700 0.1903 REMARK 3 4 2.5560 - 2.3223 1.00 2640 139 0.1595 0.1830 REMARK 3 5 2.3223 - 2.1559 1.00 2605 148 0.1548 0.1619 REMARK 3 6 2.1559 - 2.0288 1.00 2599 139 0.1501 0.1671 REMARK 3 7 2.0288 - 1.9272 1.00 2595 138 0.1553 0.1647 REMARK 3 8 1.9272 - 1.8433 1.00 2591 125 0.1697 0.1892 REMARK 3 9 1.8433 - 1.7724 1.00 2559 131 0.1859 0.1912 REMARK 3 10 1.7724 - 1.7112 0.99 2571 140 0.2110 0.2182 REMARK 3 11 1.7112 - 1.6577 0.89 2283 130 0.2476 0.2890 REMARK 3 12 1.6577 - 1.6103 0.77 1966 91 0.2737 0.3171 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.120 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.910 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.33 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 1545 REMARK 3 ANGLE : 0.752 2108 REMARK 3 CHIRALITY : 0.047 241 REMARK 3 PLANARITY : 0.005 275 REMARK 3 DIHEDRAL : 12.936 908 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 22 THROUGH 46 ) REMARK 3 ORIGIN FOR THE GROUP (A): -50.2601 -24.6273 6.3030 REMARK 3 T TENSOR REMARK 3 T11: 0.2916 T22: 0.5175 REMARK 3 T33: 0.3657 T12: -0.1521 REMARK 3 T13: -0.0112 T23: 0.0340 REMARK 3 L TENSOR REMARK 3 L11: 5.2731 L22: 4.7885 REMARK 3 L33: 4.5452 L12: -1.1302 REMARK 3 L13: 1.2238 L23: -0.2658 REMARK 3 S TENSOR REMARK 3 S11: 0.2278 S12: -1.1434 S13: -0.4695 REMARK 3 S21: 0.3141 S22: -0.0739 S23: 0.1156 REMARK 3 S31: -0.1014 S32: -0.3415 S33: 0.0035 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 47 THROUGH 67 ) REMARK 3 ORIGIN FOR THE GROUP (A): -58.2922 -28.6114 1.1202 REMARK 3 T TENSOR REMARK 3 T11: 0.2786 T22: 0.5405 REMARK 3 T33: 0.3688 T12: -0.1946 REMARK 3 T13: -0.0185 T23: -0.0642 REMARK 3 L TENSOR REMARK 3 L11: 3.5090 L22: 0.9208 REMARK 3 L33: 3.7152 L12: 0.3988 REMARK 3 L13: -0.2545 L23: 0.9508 REMARK 3 S TENSOR REMARK 3 S11: 0.2221 S12: -0.3768 S13: -0.4575 REMARK 3 S21: 0.1490 S22: -0.0338 S23: -0.1529 REMARK 3 S31: 0.0652 S32: 0.5075 S33: -0.0786 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 68 THROUGH 92 ) REMARK 3 ORIGIN FOR THE GROUP (A): -41.3692 -14.6306 -3.3856 REMARK 3 T TENSOR REMARK 3 T11: 0.1911 T22: 0.4225 REMARK 3 T33: 0.2504 T12: 0.0357 REMARK 3 T13: -0.0297 T23: -0.0127 REMARK 3 L TENSOR REMARK 3 L11: 4.9647 L22: 8.4592 REMARK 3 L33: 2.0268 L12: 4.7517 REMARK 3 L13: -0.8998 L23: -0.3063 REMARK 3 S TENSOR REMARK 3 S11: -0.0572 S12: 0.4828 S13: 0.0882 REMARK 3 S21: -0.0939 S22: 0.1586 S23: 0.1688 REMARK 3 S31: -0.1149 S32: -0.7669 S33: -0.0284 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 93 THROUGH 98 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.5989 4.3215 -0.5471 REMARK 3 T TENSOR REMARK 3 T11: 1.0018 T22: 0.4873 REMARK 3 T33: 0.9663 T12: 0.0447 REMARK 3 T13: 0.0288 T23: -0.2989 REMARK 3 L TENSOR REMARK 3 L11: 0.4413 L22: 0.4457 REMARK 3 L33: 0.0980 L12: -0.4447 REMARK 3 L13: 0.2102 L23: -0.2134 REMARK 3 S TENSOR REMARK 3 S11: -0.2935 S12: -0.1857 S13: 0.3928 REMARK 3 S21: -0.0202 S22: 0.1367 S23: 0.0877 REMARK 3 S31: -0.3344 S32: -0.1702 S33: 0.3617 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 99 THROUGH 129 ) REMARK 3 ORIGIN FOR THE GROUP (A): -31.5345 -14.0394 2.8974 REMARK 3 T TENSOR REMARK 3 T11: 0.1608 T22: 0.2541 REMARK 3 T33: 0.2039 T12: 0.0397 REMARK 3 T13: -0.0116 T23: -0.0077 REMARK 3 L TENSOR REMARK 3 L11: 3.2568 L22: 3.7188 REMARK 3 L33: 2.7612 L12: 1.0023 REMARK 3 L13: -0.1579 L23: 0.0643 REMARK 3 S TENSOR REMARK 3 S11: 0.0477 S12: -0.1386 S13: -0.0853 REMARK 3 S21: -0.0802 S22: -0.0309 S23: -0.0728 REMARK 3 S31: -0.0418 S32: -0.3522 S33: -0.0902 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 130 THROUGH 167 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.0443 -13.2222 -9.9851 REMARK 3 T TENSOR REMARK 3 T11: 0.2306 T22: 0.2291 REMARK 3 T33: 0.1628 T12: 0.0749 REMARK 3 T13: -0.0057 T23: -0.0066 REMARK 3 L TENSOR REMARK 3 L11: 3.3663 L22: 2.1092 REMARK 3 L33: 2.7285 L12: 0.6598 REMARK 3 L13: 0.0241 L23: 0.3435 REMARK 3 S TENSOR REMARK 3 S11: 0.0518 S12: 0.2271 S13: 0.0356 REMARK 3 S21: -0.2309 S22: -0.0875 S23: 0.0655 REMARK 3 S31: -0.1665 S32: -0.2635 S33: 0.0310 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 168 THROUGH 214 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.0474 -16.1094 2.7010 REMARK 3 T TENSOR REMARK 3 T11: 0.1810 T22: 0.1709 REMARK 3 T33: 0.1672 T12: 0.0385 REMARK 3 T13: 0.0009 T23: -0.0075 REMARK 3 L TENSOR REMARK 3 L11: 1.4825 L22: 1.3878 REMARK 3 L33: 1.9866 L12: -0.2381 REMARK 3 L13: -0.0134 L23: -0.1047 REMARK 3 S TENSOR REMARK 3 S11: 0.0074 S12: -0.0736 S13: -0.0014 REMARK 3 S21: 0.0738 S22: 0.0286 S23: 0.0194 REMARK 3 S31: -0.0268 S32: -0.1121 S33: -0.0195 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5MYT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-JAN-17. REMARK 100 THE DEPOSITION ID IS D_1200003276. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-DEC-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : PH RANGE 6-7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I02 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.20 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32287 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.610 REMARK 200 RESOLUTION RANGE LOW (A) : 38.316 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 200 DATA REDUNDANCY : 11.60 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08900 REMARK 200 FOR THE DATA SET : 20.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.61 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.70 REMARK 200 COMPLETENESS FOR SHELL (%) : 84.1 REMARK 200 DATA REDUNDANCY IN SHELL : 7.70 REMARK 200 R MERGE FOR SHELL (I) : 1.49400 REMARK 200 R SYM FOR SHELL (I) : 1.49400 REMARK 200 FOR SHELL : 0.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1T56 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.79 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.45 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.7 TO 2.1 AMMONIUM SULFATE 0.1M MES REMARK 280 (PH 6 TO 7) 5 TO 15%(V/V) GLYCEROL 7 TO 12%(V/V) 1,4-DIOXANE, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 16.85800 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 60.58350 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 60.58350 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 8.42900 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 60.58350 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 60.58350 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 25.28700 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 60.58350 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 60.58350 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 8.42900 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 60.58350 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 60.58350 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 25.28700 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 16.85800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3000 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16990 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -21.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 420 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -3 REMARK 465 ASP A -2 REMARK 465 ILE A -1 REMARK 465 GLU A 0 REMARK 465 PHE A 1 REMARK 465 THR A 2 REMARK 465 THR A 3 REMARK 465 SER A 4 REMARK 465 ALA A 5 REMARK 465 ALA A 6 REMARK 465 SER A 7 REMARK 465 GLN A 8 REMARK 465 ALA A 9 REMARK 465 SER A 10 REMARK 465 LEU A 11 REMARK 465 PRO A 12 REMARK 465 ARG A 13 REMARK 465 GLY A 14 REMARK 465 ARG A 15 REMARK 465 ARG A 16 REMARK 465 THR A 17 REMARK 465 ALA A 18 REMARK 465 ARG A 19 REMARK 465 PRO A 20 REMARK 465 SER A 21 REMARK 465 ASN A 215 REMARK 465 ARG A 216 REMARK 465 GLY A 217 REMARK 465 SER A 218 REMARK 465 HIS A 219 REMARK 465 HIS A 220 REMARK 465 HIS A 221 REMARK 465 HIS A 222 REMARK 465 HIS A 223 REMARK 465 HIS A 224 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 23 CG OD1 OD2 REMARK 470 ARG A 25 CD NE CZ NH1 NH2 REMARK 470 LYS A 52 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 450 O HOH A 477 7554 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 97 -179.36 -173.61 REMARK 500 THR A 165 -105.13 -107.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZQC A 301 DBREF 5MYT A 2 216 UNP P9WMC1 ETHR_MYCTU 2 216 SEQADV 5MYT MET A -3 UNP P9WMC1 INITIATING METHIONINE SEQADV 5MYT ASP A -2 UNP P9WMC1 EXPRESSION TAG SEQADV 5MYT ILE A -1 UNP P9WMC1 EXPRESSION TAG SEQADV 5MYT GLU A 0 UNP P9WMC1 EXPRESSION TAG SEQADV 5MYT PHE A 1 UNP P9WMC1 EXPRESSION TAG SEQADV 5MYT GLY A 217 UNP P9WMC1 EXPRESSION TAG SEQADV 5MYT SER A 218 UNP P9WMC1 EXPRESSION TAG SEQADV 5MYT HIS A 219 UNP P9WMC1 EXPRESSION TAG SEQADV 5MYT HIS A 220 UNP P9WMC1 EXPRESSION TAG SEQADV 5MYT HIS A 221 UNP P9WMC1 EXPRESSION TAG SEQADV 5MYT HIS A 222 UNP P9WMC1 EXPRESSION TAG SEQADV 5MYT HIS A 223 UNP P9WMC1 EXPRESSION TAG SEQADV 5MYT HIS A 224 UNP P9WMC1 EXPRESSION TAG SEQRES 1 A 228 MET ASP ILE GLU PHE THR THR SER ALA ALA SER GLN ALA SEQRES 2 A 228 SER LEU PRO ARG GLY ARG ARG THR ALA ARG PRO SER GLY SEQRES 3 A 228 ASP ASP ARG GLU LEU ALA ILE LEU ALA THR ALA GLU ASN SEQRES 4 A 228 LEU LEU GLU ASP ARG PRO LEU ALA ASP ILE SER VAL ASP SEQRES 5 A 228 ASP LEU ALA LYS GLY ALA GLY ILE SER ARG PRO THR PHE SEQRES 6 A 228 TYR PHE TYR PHE PRO SER LYS GLU ALA VAL LEU LEU THR SEQRES 7 A 228 LEU LEU ASP ARG VAL VAL ASN GLN ALA ASP MET ALA LEU SEQRES 8 A 228 GLN THR LEU ALA GLU ASN PRO ALA ASP THR ASP ARG GLU SEQRES 9 A 228 ASN MET TRP ARG THR GLY ILE ASN VAL PHE PHE GLU THR SEQRES 10 A 228 PHE GLY SER HIS LYS ALA VAL THR ARG ALA GLY GLN ALA SEQRES 11 A 228 ALA ARG ALA THR SER VAL GLU VAL ALA GLU LEU TRP SER SEQRES 12 A 228 THR PHE MET GLN LYS TRP ILE ALA TYR THR ALA ALA VAL SEQRES 13 A 228 ILE ASP ALA GLU ARG ASP ARG GLY ALA ALA PRO ARG THR SEQRES 14 A 228 LEU PRO ALA HIS GLU LEU ALA THR ALA LEU ASN LEU MET SEQRES 15 A 228 ASN GLU ARG THR LEU PHE ALA SER PHE ALA GLY GLU GLN SEQRES 16 A 228 PRO SER VAL PRO GLU ALA ARG VAL LEU ASP THR LEU VAL SEQRES 17 A 228 HIS ILE TRP VAL THR SER ILE TYR GLY GLU ASN ARG GLY SEQRES 18 A 228 SER HIS HIS HIS HIS HIS HIS HET ZQC A 301 22 HETNAM ZQC 4-METHYLSULFANYL-~{N}-(4-PYRIDIN-2-YL-1,3-THIAZOL-2- HETNAM 2 ZQC YL)BENZAMIDE FORMUL 2 ZQC C16 H13 N3 O S2 FORMUL 3 HOH *112(H2 O) HELIX 1 AA1 GLY A 22 GLU A 38 1 17 HELIX 2 AA2 PRO A 41 ILE A 45 5 5 HELIX 3 AA3 SER A 46 GLY A 55 1 10 HELIX 4 AA4 SER A 57 PHE A 65 1 9 HELIX 5 AA5 SER A 67 ASN A 93 1 27 HELIX 6 AA6 ASP A 98 SER A 116 1 19 HELIX 7 AA7 HIS A 117 ARG A 128 1 12 HELIX 8 AA8 SER A 131 ARG A 159 1 29 HELIX 9 AA9 PRO A 167 GLY A 189 1 23 HELIX 10 AB1 PRO A 195 GLY A 213 1 19 CISPEP 1 GLN A 191 PRO A 192 0 1.26 SITE 1 AC1 11 PHE A 110 PHE A 114 TRP A 138 MET A 142 SITE 2 AC1 11 TRP A 145 THR A 149 ASN A 176 ASN A 179 SITE 3 AC1 11 GLU A 180 PHE A 184 TRP A 207 CRYST1 121.167 121.167 33.716 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008253 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008253 0.000000 0.00000 SCALE3 0.000000 0.000000 0.029660 0.00000