HEADER PROTEIN TRANSPORT 01-JUL-13 4LHW TITLE CRYSTAL STRUCTURE OF RAB8 IN ITS ACTIVE GPPNHP-BOUND FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: RAS-RELATED PROTEIN RAB-8A; COMPND 3 CHAIN: A, B, C, D, E; COMPND 4 FRAGMENT: UNP RESIDUES 6-176; COMPND 5 SYNONYM: ONCOGENE C-MEL; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: RAB8A, MEL, RAB8; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(RIL)DE3; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: OPINE KEYWDS SMALL GTPASE, PROTEIN TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR Z.GUO,X.M.HOU,R.S.GOODY,A.ITZEN REVDAT 3 20-SEP-23 4LHW 1 REMARK SEQADV LINK REVDAT 2 18-DEC-13 4LHW 1 JRNL REVDAT 1 09-OCT-13 4LHW 0 JRNL AUTH Z.GUO,X.HOU,R.S.GOODY,A.ITZEN JRNL TITL INTERMEDIATES IN THE GUANINE NUCLEOTIDE EXCHANGE REACTION OF JRNL TITL 2 RAB8 PROTEIN CATALYZED BY GUANINE NUCLEOTIDE EXCHANGE JRNL TITL 3 FACTORS RABIN8 AND GRAB. JRNL REF J.BIOL.CHEM. V. 288 32466 2013 JRNL REFN ISSN 0021-9258 JRNL PMID 24072714 JRNL DOI 10.1074/JBC.M113.498329 REMARK 2 REMARK 2 RESOLUTION. 1.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.89 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 125855 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.146 REMARK 3 R VALUE (WORKING SET) : 0.144 REMARK 3 FREE R VALUE : 0.183 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 6688 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.55 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.59 REMARK 3 REFLECTION IN BIN (WORKING SET) : 9142 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.28 REMARK 3 BIN R VALUE (WORKING SET) : 0.1350 REMARK 3 BIN FREE R VALUE SET COUNT : 443 REMARK 3 BIN FREE R VALUE : 0.1830 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6913 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 173 REMARK 3 SOLVENT ATOMS : 1049 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.43 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.74000 REMARK 3 B22 (A**2) : -0.73000 REMARK 3 B33 (A**2) : -0.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.090 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.074 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.042 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.064 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.972 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.959 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7247 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 5004 ; 0.000 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9771 ; 1.479 ; 1.981 REMARK 3 BOND ANGLES OTHERS (DEGREES): 12171 ; 4.147 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 875 ; 6.099 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 339 ;33.270 ;24.130 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1383 ;15.317 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 51 ;18.573 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1080 ; 0.334 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7861 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1508 ; 0.007 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1586 ; 0.233 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 5228 ; 0.249 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3625 ; 0.182 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 3547 ; 0.110 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 845 ; 0.190 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 3 ; 0.024 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 24 ; 0.255 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 104 ; 0.299 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 53 ; 0.201 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4267 ; 1.482 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1780 ; 2.077 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 6874 ; 2.477 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2980 ; 3.178 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2886 ; 4.736 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 6 A 176 REMARK 3 ORIGIN FOR THE GROUP (A): 30.9729 -14.8494 -5.3893 REMARK 3 T TENSOR REMARK 3 T11: -0.0106 T22: 0.0025 REMARK 3 T33: -0.0031 T12: 0.0045 REMARK 3 T13: 0.0011 T23: 0.0033 REMARK 3 L TENSOR REMARK 3 L11: 0.0644 L22: 0.1753 REMARK 3 L33: 0.2097 L12: 0.0172 REMARK 3 L13: 0.0151 L23: -0.0558 REMARK 3 S TENSOR REMARK 3 S11: -0.0061 S12: -0.0044 S13: -0.0066 REMARK 3 S21: -0.0063 S22: -0.0077 S23: -0.0148 REMARK 3 S31: 0.0066 S32: 0.0245 S33: 0.0138 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 3 B 175 REMARK 3 ORIGIN FOR THE GROUP (A): 27.7741 16.3700 7.5781 REMARK 3 T TENSOR REMARK 3 T11: 0.0129 T22: -0.0069 REMARK 3 T33: -0.0145 T12: -0.0073 REMARK 3 T13: -0.0018 T23: 0.0018 REMARK 3 L TENSOR REMARK 3 L11: 0.0790 L22: 0.1683 REMARK 3 L33: 0.2446 L12: 0.0527 REMARK 3 L13: 0.0151 L23: -0.0359 REMARK 3 S TENSOR REMARK 3 S11: -0.0064 S12: -0.0020 S13: -0.0038 REMARK 3 S21: -0.0084 S22: 0.0025 S23: 0.0020 REMARK 3 S31: -0.0320 S32: 0.0297 S33: 0.0040 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 6 C 176 REMARK 3 ORIGIN FOR THE GROUP (A): 5.1321 6.4024 -18.4353 REMARK 3 T TENSOR REMARK 3 T11: -0.0074 T22: 0.0006 REMARK 3 T33: -0.0068 T12: -0.0024 REMARK 3 T13: -0.0049 T23: 0.0059 REMARK 3 L TENSOR REMARK 3 L11: 0.0982 L22: 0.2241 REMARK 3 L33: 0.3831 L12: -0.0380 REMARK 3 L13: 0.1327 L23: 0.0526 REMARK 3 S TENSOR REMARK 3 S11: -0.0131 S12: 0.0294 S13: -0.0144 REMARK 3 S21: -0.0143 S22: -0.0120 S23: 0.0220 REMARK 3 S31: -0.0461 S32: 0.0307 S33: 0.0251 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 4 D 176 REMARK 3 ORIGIN FOR THE GROUP (A): 35.7722 11.7460 -30.6809 REMARK 3 T TENSOR REMARK 3 T11: -0.0058 T22: -0.0015 REMARK 3 T33: -0.0091 T12: -0.0071 REMARK 3 T13: 0.0062 T23: -0.0026 REMARK 3 L TENSOR REMARK 3 L11: 0.0182 L22: 0.2821 REMARK 3 L33: 0.3824 L12: -0.0085 REMARK 3 L13: 0.0554 L23: -0.0337 REMARK 3 S TENSOR REMARK 3 S11: 0.0116 S12: -0.0122 S13: -0.0096 REMARK 3 S21: 0.0077 S22: -0.0236 S23: -0.0084 REMARK 3 S31: -0.0264 S32: 0.0059 S33: 0.0120 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 6 E 176 REMARK 3 ORIGIN FOR THE GROUP (A): 65.6292 -0.7356 2.9260 REMARK 3 T TENSOR REMARK 3 T11: -0.0241 T22: -0.0006 REMARK 3 T33: 0.0210 T12: 0.0031 REMARK 3 T13: 0.0141 T23: 0.0270 REMARK 3 L TENSOR REMARK 3 L11: 0.1986 L22: 0.4880 REMARK 3 L33: 0.4460 L12: 0.1225 REMARK 3 L13: -0.1964 L23: -0.3878 REMARK 3 S TENSOR REMARK 3 S11: 0.0446 S12: 0.0621 S13: 0.0488 REMARK 3 S21: 0.0678 S22: 0.0822 S23: 0.1015 REMARK 3 S31: -0.0165 S32: -0.0442 S33: -0.1268 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 5 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 401 A 644 REMARK 3 RESIDUE RANGE : B 301 B 488 REMARK 3 RESIDUE RANGE : C 301 C 531 REMARK 3 RESIDUE RANGE : D 301 D 527 REMARK 3 RESIDUE RANGE : E 301 E 455 REMARK 3 ORIGIN FOR THE GROUP (A): 30.7191 2.3820 -10.1315 REMARK 3 T TENSOR REMARK 3 T11: 0.0060 T22: -0.0033 REMARK 3 T33: 0.0051 T12: 0.0001 REMARK 3 T13: 0.0024 T23: 0.0007 REMARK 3 L TENSOR REMARK 3 L11: 0.0032 L22: 0.0065 REMARK 3 L33: 0.0185 L12: 0.0026 REMARK 3 L13: 0.0050 L23: -0.0028 REMARK 3 S TENSOR REMARK 3 S11: -0.0021 S12: 0.0045 S13: 0.0035 REMARK 3 S21: 0.0014 S22: 0.0006 S23: -0.0003 REMARK 3 S31: -0.0038 S32: 0.0030 S33: 0.0015 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4LHW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-JUL-13. REMARK 100 THE DEPOSITION ID IS D_1000080650. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-MAY-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM, XDS REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 132605 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.550 REMARK 200 RESOLUTION RANGE LOW (A) : 19.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 21.620 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASES REMARK 200 STARTING MODEL: 1YZQ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: RAB8A6-176:GPPNHP (15 MG/ML; BUFFER: REMARK 280 25 MM HEPES, 40 MM NACL, 1 MM MGCL2, 10 M GPPNHP AND 5 MM - REMARK 280 MERCAPTOETHANOL) CRYSTALS WERE PRODUCED IN 15% (W/V) PEG8000, REMARK 280 7.5 %(V/V) MPD, 0.1 M HEPES, PH 6.8, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 45.19050 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 52.54500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 48.33800 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 52.54500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 45.19050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 48.33800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 3 REMARK 465 SER A 4 REMARK 465 HIS A 5 REMARK 465 LYS B 176 REMARK 465 GLY C 3 REMARK 465 SER C 4 REMARK 465 HIS C 5 REMARK 465 GLY D 3 REMARK 465 GLY E 3 REMARK 465 SER E 4 REMARK 465 HIS E 5 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 176 CG CD CE NZ REMARK 470 LYS C 176 CG CD CE NZ REMARK 470 LYS D 176 CG CD CE NZ REMARK 470 ASP E 113 CG OD1 OD2 REMARK 470 LYS E 176 CG CD CE NZ REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU D 137 CA CB CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 551 O HOH A 626 1.82 REMARK 500 NE2 GLN E 67 O HOH E 367 1.82 REMARK 500 O HOH B 331 O HOH B 420 1.88 REMARK 500 CG2 ILE D 47 O HOH D 354 1.97 REMARK 500 O HOH C 336 O HOH C 531 1.98 REMARK 500 CB ALA A 65 O HOH A 551 2.01 REMARK 500 O HOH C 384 O HOH C 496 2.07 REMARK 500 O HOH E 358 O HOH E 450 2.08 REMARK 500 O HOH A 491 O HOH D 446 2.11 REMARK 500 O HOH C 346 O HOH C 476 2.12 REMARK 500 O ARG D 79 O HOH D 365 2.15 REMARK 500 O HOH C 388 O HOH C 492 2.18 REMARK 500 CG ASP B 44 O HOH B 420 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 TRP C 62 CB TRP C 62 CG -0.246 REMARK 500 SER D 4 N SER D 4 CA -0.129 REMARK 500 SER D 4 CB SER D 4 OG -0.133 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP B 44 CB - CG - OD1 ANGL. DEV. = 6.4 DEGREES REMARK 500 ILE B 73 CB - CA - C ANGL. DEV. = -12.4 DEGREES REMARK 500 LEU D 12 CA - CB - CG ANGL. DEV. = 14.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 122 31.78 73.10 REMARK 500 VAL A 125 52.58 -98.68 REMARK 500 LYS B 122 34.53 71.39 REMARK 500 LYS C 122 36.85 72.88 REMARK 500 VAL C 125 67.52 -103.05 REMARK 500 HIS D 5 -69.82 -162.02 REMARK 500 LYS D 122 34.77 70.52 REMARK 500 HIS E 109 -130.86 -100.33 REMARK 500 LYS E 122 34.48 72.77 REMARK 500 VAL E 125 54.94 -102.48 REMARK 500 ASP E 127 -39.39 -36.51 REMARK 500 ASN E 155 60.80 63.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 SER D 4 HIS D 5 -125.41 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 301 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 22 OG1 REMARK 620 2 THR A 40 OG1 84.2 REMARK 620 3 GNP A 302 O2G 175.2 91.0 REMARK 620 4 GNP A 302 O2B 89.3 173.2 95.5 REMARK 620 5 HOH A 402 O 87.1 90.4 92.8 91.4 REMARK 620 6 HOH A 425 O 89.4 89.5 90.7 88.3 176.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR B 22 OG1 REMARK 620 2 THR B 40 OG1 86.9 REMARK 620 3 GNP B 202 O2G 174.5 88.7 REMARK 620 4 GNP B 202 O2B 89.7 176.6 94.7 REMARK 620 5 HOH B 322 O 88.5 88.5 94.6 91.4 REMARK 620 6 HOH B 327 O 87.9 92.4 89.1 87.5 176.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR C 22 OG1 REMARK 620 2 THR C 40 OG1 83.9 REMARK 620 3 GNP C 202 O2G 171.5 88.1 REMARK 620 4 GNP C 202 O2B 92.0 175.9 96.0 REMARK 620 5 HOH C 307 O 88.7 91.0 94.4 89.2 REMARK 620 6 HOH C 318 O 85.2 88.3 91.6 91.1 173.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG D 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR D 22 OG1 REMARK 620 2 THR D 40 OG1 85.4 REMARK 620 3 GNP D 202 O2G 174.2 88.8 REMARK 620 4 GNP D 202 O2B 89.6 174.9 96.1 REMARK 620 5 HOH D 311 O 86.4 89.5 92.7 91.7 REMARK 620 6 HOH D 314 O 87.0 90.0 93.9 88.3 173.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG E 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR E 22 OG1 REMARK 620 2 THR E 40 OG1 84.6 REMARK 620 3 GNP E 202 O2G 172.8 88.6 REMARK 620 4 GNP E 202 O2B 91.2 175.8 95.6 REMARK 620 5 HOH E 304 O 85.3 92.9 92.6 86.6 REMARK 620 6 HOH E 309 O 87.1 89.9 95.5 90.1 171.6 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GNP A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GNP B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GNP C 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG D 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GNP D 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG E 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GNP E 202 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4LHV RELATED DB: PDB REMARK 900 RELATED ID: 4LHX RELATED DB: PDB REMARK 900 RELATED ID: 4LHY RELATED DB: PDB REMARK 900 RELATED ID: 4LHZ RELATED DB: PDB REMARK 900 RELATED ID: 4LI0 RELATED DB: PDB DBREF 4LHW A 6 176 UNP P61006 RAB8A_HUMAN 6 176 DBREF 4LHW B 6 176 UNP P61006 RAB8A_HUMAN 6 176 DBREF 4LHW C 6 176 UNP P61006 RAB8A_HUMAN 6 176 DBREF 4LHW D 6 176 UNP P61006 RAB8A_HUMAN 6 176 DBREF 4LHW E 6 176 UNP P61006 RAB8A_HUMAN 6 176 SEQADV 4LHW GLY A 3 UNP P61006 EXPRESSION TAG SEQADV 4LHW SER A 4 UNP P61006 EXPRESSION TAG SEQADV 4LHW HIS A 5 UNP P61006 EXPRESSION TAG SEQADV 4LHW GLY B 3 UNP P61006 EXPRESSION TAG SEQADV 4LHW SER B 4 UNP P61006 EXPRESSION TAG SEQADV 4LHW HIS B 5 UNP P61006 EXPRESSION TAG SEQADV 4LHW GLY C 3 UNP P61006 EXPRESSION TAG SEQADV 4LHW SER C 4 UNP P61006 EXPRESSION TAG SEQADV 4LHW HIS C 5 UNP P61006 EXPRESSION TAG SEQADV 4LHW GLY D 3 UNP P61006 EXPRESSION TAG SEQADV 4LHW SER D 4 UNP P61006 EXPRESSION TAG SEQADV 4LHW HIS D 5 UNP P61006 EXPRESSION TAG SEQADV 4LHW GLY E 3 UNP P61006 EXPRESSION TAG SEQADV 4LHW SER E 4 UNP P61006 EXPRESSION TAG SEQADV 4LHW HIS E 5 UNP P61006 EXPRESSION TAG SEQRES 1 A 174 GLY SER HIS ASP TYR LEU PHE LYS LEU LEU LEU ILE GLY SEQRES 2 A 174 ASP SER GLY VAL GLY LYS THR CYS VAL LEU PHE ARG PHE SEQRES 3 A 174 SER GLU ASP ALA PHE ASN SER THR PHE ILE SER THR ILE SEQRES 4 A 174 GLY ILE ASP PHE LYS ILE ARG THR ILE GLU LEU ASP GLY SEQRES 5 A 174 LYS ARG ILE LYS LEU GLN ILE TRP ASP THR ALA GLY GLN SEQRES 6 A 174 GLU ARG PHE ARG THR ILE THR THR ALA TYR TYR ARG GLY SEQRES 7 A 174 ALA MET GLY ILE MET LEU VAL TYR ASP ILE THR ASN GLU SEQRES 8 A 174 LYS SER PHE ASP ASN ILE ARG ASN TRP ILE ARG ASN ILE SEQRES 9 A 174 GLU GLU HIS ALA SER ALA ASP VAL GLU LYS MET ILE LEU SEQRES 10 A 174 GLY ASN LYS CYS ASP VAL ASN ASP LYS ARG GLN VAL SER SEQRES 11 A 174 LYS GLU ARG GLY GLU LYS LEU ALA LEU ASP TYR GLY ILE SEQRES 12 A 174 LYS PHE MET GLU THR SER ALA LYS ALA ASN ILE ASN VAL SEQRES 13 A 174 GLU ASN ALA PHE PHE THR LEU ALA ARG ASP ILE LYS ALA SEQRES 14 A 174 LYS MET ASP LYS LYS SEQRES 1 B 174 GLY SER HIS ASP TYR LEU PHE LYS LEU LEU LEU ILE GLY SEQRES 2 B 174 ASP SER GLY VAL GLY LYS THR CYS VAL LEU PHE ARG PHE SEQRES 3 B 174 SER GLU ASP ALA PHE ASN SER THR PHE ILE SER THR ILE SEQRES 4 B 174 GLY ILE ASP PHE LYS ILE ARG THR ILE GLU LEU ASP GLY SEQRES 5 B 174 LYS ARG ILE LYS LEU GLN ILE TRP ASP THR ALA GLY GLN SEQRES 6 B 174 GLU ARG PHE ARG THR ILE THR THR ALA TYR TYR ARG GLY SEQRES 7 B 174 ALA MET GLY ILE MET LEU VAL TYR ASP ILE THR ASN GLU SEQRES 8 B 174 LYS SER PHE ASP ASN ILE ARG ASN TRP ILE ARG ASN ILE SEQRES 9 B 174 GLU GLU HIS ALA SER ALA ASP VAL GLU LYS MET ILE LEU SEQRES 10 B 174 GLY ASN LYS CYS ASP VAL ASN ASP LYS ARG GLN VAL SER SEQRES 11 B 174 LYS GLU ARG GLY GLU LYS LEU ALA LEU ASP TYR GLY ILE SEQRES 12 B 174 LYS PHE MET GLU THR SER ALA LYS ALA ASN ILE ASN VAL SEQRES 13 B 174 GLU ASN ALA PHE PHE THR LEU ALA ARG ASP ILE LYS ALA SEQRES 14 B 174 LYS MET ASP LYS LYS SEQRES 1 C 174 GLY SER HIS ASP TYR LEU PHE LYS LEU LEU LEU ILE GLY SEQRES 2 C 174 ASP SER GLY VAL GLY LYS THR CYS VAL LEU PHE ARG PHE SEQRES 3 C 174 SER GLU ASP ALA PHE ASN SER THR PHE ILE SER THR ILE SEQRES 4 C 174 GLY ILE ASP PHE LYS ILE ARG THR ILE GLU LEU ASP GLY SEQRES 5 C 174 LYS ARG ILE LYS LEU GLN ILE TRP ASP THR ALA GLY GLN SEQRES 6 C 174 GLU ARG PHE ARG THR ILE THR THR ALA TYR TYR ARG GLY SEQRES 7 C 174 ALA MET GLY ILE MET LEU VAL TYR ASP ILE THR ASN GLU SEQRES 8 C 174 LYS SER PHE ASP ASN ILE ARG ASN TRP ILE ARG ASN ILE SEQRES 9 C 174 GLU GLU HIS ALA SER ALA ASP VAL GLU LYS MET ILE LEU SEQRES 10 C 174 GLY ASN LYS CYS ASP VAL ASN ASP LYS ARG GLN VAL SER SEQRES 11 C 174 LYS GLU ARG GLY GLU LYS LEU ALA LEU ASP TYR GLY ILE SEQRES 12 C 174 LYS PHE MET GLU THR SER ALA LYS ALA ASN ILE ASN VAL SEQRES 13 C 174 GLU ASN ALA PHE PHE THR LEU ALA ARG ASP ILE LYS ALA SEQRES 14 C 174 LYS MET ASP LYS LYS SEQRES 1 D 174 GLY SER HIS ASP TYR LEU PHE LYS LEU LEU LEU ILE GLY SEQRES 2 D 174 ASP SER GLY VAL GLY LYS THR CYS VAL LEU PHE ARG PHE SEQRES 3 D 174 SER GLU ASP ALA PHE ASN SER THR PHE ILE SER THR ILE SEQRES 4 D 174 GLY ILE ASP PHE LYS ILE ARG THR ILE GLU LEU ASP GLY SEQRES 5 D 174 LYS ARG ILE LYS LEU GLN ILE TRP ASP THR ALA GLY GLN SEQRES 6 D 174 GLU ARG PHE ARG THR ILE THR THR ALA TYR TYR ARG GLY SEQRES 7 D 174 ALA MET GLY ILE MET LEU VAL TYR ASP ILE THR ASN GLU SEQRES 8 D 174 LYS SER PHE ASP ASN ILE ARG ASN TRP ILE ARG ASN ILE SEQRES 9 D 174 GLU GLU HIS ALA SER ALA ASP VAL GLU LYS MET ILE LEU SEQRES 10 D 174 GLY ASN LYS CYS ASP VAL ASN ASP LYS ARG GLN VAL SER SEQRES 11 D 174 LYS GLU ARG GLY GLU LYS LEU ALA LEU ASP TYR GLY ILE SEQRES 12 D 174 LYS PHE MET GLU THR SER ALA LYS ALA ASN ILE ASN VAL SEQRES 13 D 174 GLU ASN ALA PHE PHE THR LEU ALA ARG ASP ILE LYS ALA SEQRES 14 D 174 LYS MET ASP LYS LYS SEQRES 1 E 174 GLY SER HIS ASP TYR LEU PHE LYS LEU LEU LEU ILE GLY SEQRES 2 E 174 ASP SER GLY VAL GLY LYS THR CYS VAL LEU PHE ARG PHE SEQRES 3 E 174 SER GLU ASP ALA PHE ASN SER THR PHE ILE SER THR ILE SEQRES 4 E 174 GLY ILE ASP PHE LYS ILE ARG THR ILE GLU LEU ASP GLY SEQRES 5 E 174 LYS ARG ILE LYS LEU GLN ILE TRP ASP THR ALA GLY GLN SEQRES 6 E 174 GLU ARG PHE ARG THR ILE THR THR ALA TYR TYR ARG GLY SEQRES 7 E 174 ALA MET GLY ILE MET LEU VAL TYR ASP ILE THR ASN GLU SEQRES 8 E 174 LYS SER PHE ASP ASN ILE ARG ASN TRP ILE ARG ASN ILE SEQRES 9 E 174 GLU GLU HIS ALA SER ALA ASP VAL GLU LYS MET ILE LEU SEQRES 10 E 174 GLY ASN LYS CYS ASP VAL ASN ASP LYS ARG GLN VAL SER SEQRES 11 E 174 LYS GLU ARG GLY GLU LYS LEU ALA LEU ASP TYR GLY ILE SEQRES 12 E 174 LYS PHE MET GLU THR SER ALA LYS ALA ASN ILE ASN VAL SEQRES 13 E 174 GLU ASN ALA PHE PHE THR LEU ALA ARG ASP ILE LYS ALA SEQRES 14 E 174 LYS MET ASP LYS LYS HET MG A 301 1 HET GNP A 302 32 HET MPD A 303 8 HET MG B 201 1 HET GNP B 202 32 HET MG C 201 1 HET GNP C 202 32 HET MG D 201 1 HET GNP D 202 32 HET MG E 201 1 HET GNP E 202 32 HETNAM MG MAGNESIUM ION HETNAM GNP PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL FORMUL 6 MG 5(MG 2+) FORMUL 7 GNP 5(C10 H17 N6 O13 P3) FORMUL 8 MPD C6 H14 O2 FORMUL 17 HOH *1049(H2 O) HELIX 1 1 GLY A 20 ASP A 31 1 12 HELIX 2 2 THR A 72 ARG A 79 5 8 HELIX 3 3 ASN A 92 ASN A 98 1 7 HELIX 4 4 ASN A 98 ALA A 110 1 13 HELIX 5 5 VAL A 125 ARG A 129 5 5 HELIX 6 6 SER A 132 TYR A 143 1 12 HELIX 7 7 ASN A 157 LYS A 175 1 19 HELIX 8 8 GLY B 20 ASP B 31 1 12 HELIX 9 9 GLN B 67 ARG B 69 5 3 HELIX 10 10 PHE B 70 TYR B 77 1 8 HELIX 11 11 ASN B 92 ASN B 98 1 7 HELIX 12 12 ASN B 98 ALA B 110 1 13 HELIX 13 13 VAL B 125 ARG B 129 5 5 HELIX 14 14 SER B 132 GLY B 144 1 13 HELIX 15 15 ASN B 157 LYS B 175 1 19 HELIX 16 16 GLY C 20 ASP C 31 1 12 HELIX 17 17 GLN C 67 ARG C 69 5 3 HELIX 18 18 PHE C 70 THR C 75 1 6 HELIX 19 19 ALA C 76 TYR C 78 5 3 HELIX 20 20 ASN C 92 ASN C 98 1 7 HELIX 21 21 ASN C 98 ALA C 110 1 13 HELIX 22 22 VAL C 125 ARG C 129 5 5 HELIX 23 23 SER C 132 TYR C 143 1 12 HELIX 24 24 ASN C 157 LYS C 176 1 20 HELIX 25 25 GLY D 20 ASP D 31 1 12 HELIX 26 26 GLN D 67 ARG D 69 5 3 HELIX 27 27 PHE D 70 ALA D 76 1 7 HELIX 28 28 ASN D 92 ASN D 98 1 7 HELIX 29 29 ASN D 98 ALA D 110 1 13 HELIX 30 30 VAL D 125 ARG D 129 5 5 HELIX 31 31 SER D 132 GLY D 144 1 13 HELIX 32 32 ASN D 157 ASP D 174 1 18 HELIX 33 33 GLY E 20 ASP E 31 1 12 HELIX 34 34 GLN E 67 ARG E 69 5 3 HELIX 35 35 PHE E 70 THR E 75 1 6 HELIX 36 36 ALA E 76 TYR E 78 5 3 HELIX 37 37 ASN E 92 ASN E 98 1 7 HELIX 38 38 ASN E 98 HIS E 109 1 12 HELIX 39 39 VAL E 125 ARG E 129 5 5 HELIX 40 40 SER E 132 GLY E 144 1 13 HELIX 41 41 ASN E 157 LYS E 176 1 20 SHEET 1 A 6 ILE A 43 LEU A 52 0 SHEET 2 A 6 LYS A 55 THR A 64 -1 O ILE A 57 N ILE A 50 SHEET 3 A 6 TYR A 7 ILE A 14 1 N LEU A 11 O TRP A 62 SHEET 4 A 6 GLY A 83 ASP A 89 1 O MET A 85 N ILE A 14 SHEET 5 A 6 GLU A 115 ASN A 121 1 O MET A 117 N LEU A 86 SHEET 6 A 6 LYS A 146 GLU A 149 1 O LYS A 146 N ILE A 118 SHEET 1 B 6 ILE B 43 LEU B 52 0 SHEET 2 B 6 LYS B 55 THR B 64 -1 O ILE B 57 N ILE B 50 SHEET 3 B 6 TYR B 7 ILE B 14 1 N LEU B 11 O TRP B 62 SHEET 4 B 6 GLY B 83 ASP B 89 1 O MET B 85 N LEU B 12 SHEET 5 B 6 GLU B 115 ASN B 121 1 O ASN B 121 N TYR B 88 SHEET 6 B 6 LYS B 146 GLU B 149 1 O LYS B 146 N ILE B 118 SHEET 1 C 6 ILE C 43 LEU C 52 0 SHEET 2 C 6 LYS C 55 THR C 64 -1 O ILE C 61 N LYS C 46 SHEET 3 C 6 TYR C 7 GLY C 15 1 N LEU C 11 O GLN C 60 SHEET 4 C 6 GLY C 83 ASP C 89 1 O MET C 85 N ILE C 14 SHEET 5 C 6 GLU C 115 ASN C 121 1 O ASN C 121 N TYR C 88 SHEET 6 C 6 LYS C 146 GLU C 149 1 O LYS C 146 N ILE C 118 SHEET 1 D 6 ILE D 43 LEU D 52 0 SHEET 2 D 6 LYS D 55 THR D 64 -1 O ILE D 61 N LYS D 46 SHEET 3 D 6 TYR D 7 ILE D 14 1 N LEU D 11 O GLN D 60 SHEET 4 D 6 GLY D 83 ASP D 89 1 O VAL D 87 N ILE D 14 SHEET 5 D 6 GLU D 115 ASN D 121 1 O ASN D 121 N TYR D 88 SHEET 6 D 6 LYS D 146 GLU D 149 1 O LYS D 146 N ILE D 118 SHEET 1 E 6 ILE E 43 LEU E 52 0 SHEET 2 E 6 LYS E 55 THR E 64 -1 O ILE E 57 N ILE E 50 SHEET 3 E 6 TYR E 7 ILE E 14 1 N LEU E 11 O TRP E 62 SHEET 4 E 6 GLY E 83 ASP E 89 1 O VAL E 87 N ILE E 14 SHEET 5 E 6 GLU E 115 ASN E 121 1 O MET E 117 N LEU E 86 SHEET 6 E 6 LYS E 146 GLU E 149 1 O LYS E 146 N ILE E 118 LINK OG1 THR A 22 MG MG A 301 1555 1555 2.05 LINK OG1 THR A 40 MG MG A 301 1555 1555 2.08 LINK MG MG A 301 O2G GNP A 302 1555 1555 2.00 LINK MG MG A 301 O2B GNP A 302 1555 1555 2.04 LINK MG MG A 301 O HOH A 402 1555 1555 2.10 LINK MG MG A 301 O HOH A 425 1555 1555 2.11 LINK OG1 THR B 22 MG MG B 201 1555 1555 2.06 LINK OG1 THR B 40 MG MG B 201 1555 1555 2.08 LINK MG MG B 201 O2G GNP B 202 1555 1555 1.98 LINK MG MG B 201 O2B GNP B 202 1555 1555 2.06 LINK MG MG B 201 O HOH B 322 1555 1555 2.10 LINK MG MG B 201 O HOH B 327 1555 1555 2.13 LINK OG1 THR C 22 MG MG C 201 1555 1555 2.07 LINK OG1 THR C 40 MG MG C 201 1555 1555 2.14 LINK MG MG C 201 O2G GNP C 202 1555 1555 2.00 LINK MG MG C 201 O2B GNP C 202 1555 1555 2.04 LINK MG MG C 201 O HOH C 307 1555 1555 2.07 LINK MG MG C 201 O HOH C 318 1555 1555 2.12 LINK OG1 THR D 22 MG MG D 201 1555 1555 2.11 LINK OG1 THR D 40 MG MG D 201 1555 1555 2.16 LINK MG MG D 201 O2G GNP D 202 1555 1555 1.95 LINK MG MG D 201 O2B GNP D 202 1555 1555 2.05 LINK MG MG D 201 O HOH D 311 1555 1555 2.10 LINK MG MG D 201 O HOH D 314 1555 1555 2.18 LINK OG1 THR E 22 MG MG E 201 1555 1555 2.10 LINK OG1 THR E 40 MG MG E 201 1555 1555 2.13 LINK MG MG E 201 O2G GNP E 202 1555 1555 1.98 LINK MG MG E 201 O2B GNP E 202 1555 1555 2.07 LINK MG MG E 201 O HOH E 304 1555 1555 2.15 LINK MG MG E 201 O HOH E 309 1555 1555 2.10 CISPEP 1 ALA E 110 SER E 111 0 -3.76 SITE 1 AC1 5 THR A 22 THR A 40 GNP A 302 HOH A 402 SITE 2 AC1 5 HOH A 425 SITE 1 AC2 33 SER A 17 GLY A 18 VAL A 19 GLY A 20 SITE 2 AC2 33 LYS A 21 THR A 22 CYS A 23 PHE A 33 SITE 3 AC2 33 ASN A 34 SER A 35 THR A 36 PHE A 37 SITE 4 AC2 33 SER A 39 THR A 40 ALA A 65 GLY A 66 SITE 5 AC2 33 ASN A 121 LYS A 122 ASP A 124 VAL A 125 SITE 6 AC2 33 SER A 151 ALA A 152 LYS A 153 MG A 301 SITE 7 AC2 33 HOH A 402 HOH A 414 HOH A 425 HOH A 475 SITE 8 AC2 33 HOH A 486 HOH A 551 HOH A 557 HOH A 590 SITE 9 AC2 33 HOH A 626 SITE 1 AC3 6 TRP A 62 TYR A 77 GLY A 80 ILE B 73 SITE 2 AC3 6 TYR B 77 HOH B 302 SITE 1 AC4 5 THR B 22 THR B 40 GNP B 202 HOH B 322 SITE 2 AC4 5 HOH B 327 SITE 1 AC5 29 SER B 17 GLY B 18 VAL B 19 GLY B 20 SITE 2 AC5 29 LYS B 21 THR B 22 CYS B 23 PHE B 33 SITE 3 AC5 29 ASN B 34 SER B 35 THR B 36 PHE B 37 SITE 4 AC5 29 SER B 39 THR B 40 GLY B 66 ASN B 121 SITE 5 AC5 29 LYS B 122 ASP B 124 VAL B 125 SER B 151 SITE 6 AC5 29 ALA B 152 LYS B 153 MG B 201 HOH B 307 SITE 7 AC5 29 HOH B 322 HOH B 326 HOH B 327 HOH B 455 SITE 8 AC5 29 HOH D 428 SITE 1 AC6 5 THR C 22 THR C 40 GNP C 202 HOH C 307 SITE 2 AC6 5 HOH C 318 SITE 1 AC7 30 SER C 17 GLY C 18 VAL C 19 GLY C 20 SITE 2 AC7 30 LYS C 21 THR C 22 CYS C 23 PHE C 33 SITE 3 AC7 30 SER C 39 THR C 40 GLY C 66 ASN C 121 SITE 4 AC7 30 LYS C 122 ASP C 124 VAL C 125 SER C 151 SITE 5 AC7 30 ALA C 152 LYS C 153 MG C 201 HOH C 304 SITE 6 AC7 30 HOH C 307 HOH C 308 HOH C 318 HOH C 329 SITE 7 AC7 30 HOH C 343 HOH C 344 HOH C 349 HOH C 369 SITE 8 AC7 30 HOH C 427 HOH C 490 SITE 1 AC8 5 THR D 22 THR D 40 GNP D 202 HOH D 311 SITE 2 AC8 5 HOH D 314 SITE 1 AC9 30 SER D 17 GLY D 18 VAL D 19 GLY D 20 SITE 2 AC9 30 LYS D 21 THR D 22 CYS D 23 PHE D 33 SITE 3 AC9 30 SER D 39 THR D 40 GLY D 66 ASN D 121 SITE 4 AC9 30 LYS D 122 ASP D 124 VAL D 125 SER D 151 SITE 5 AC9 30 ALA D 152 LYS D 153 MG D 201 HOH D 305 SITE 6 AC9 30 HOH D 308 HOH D 311 HOH D 314 HOH D 335 SITE 7 AC9 30 HOH D 351 HOH D 355 HOH D 376 HOH D 404 SITE 8 AC9 30 HOH D 415 HOH D 482 SITE 1 BC1 5 THR E 22 THR E 40 GNP E 202 HOH E 304 SITE 2 BC1 5 HOH E 309 SITE 1 BC2 31 SER E 17 GLY E 18 VAL E 19 GLY E 20 SITE 2 BC2 31 LYS E 21 THR E 22 CYS E 23 PHE E 33 SITE 3 BC2 31 PHE E 37 SER E 39 THR E 40 GLY E 66 SITE 4 BC2 31 ASN E 121 LYS E 122 ASP E 124 VAL E 125 SITE 5 BC2 31 SER E 151 ALA E 152 LYS E 153 MG E 201 SITE 6 BC2 31 HOH E 303 HOH E 304 HOH E 308 HOH E 309 SITE 7 BC2 31 HOH E 310 HOH E 331 HOH E 332 HOH E 395 SITE 8 BC2 31 HOH E 407 HOH E 413 HOH E 427 CRYST1 90.381 96.676 105.090 90.00 90.00 90.00 P 21 21 21 20 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011064 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010344 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009516 0.00000