HEADER TRANSFERASE 29-JUN-12 4FV3 TITLE CRYSTAL STRUCTURE OF THE ERK2 COMPLEXED WITH EK6 COMPND MOL_ID: 1; COMPND 2 MOLECULE: MITOGEN-ACTIVATED PROTEIN KINASE 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: MAP KINASE 1, MAPK 1, ERT1, EXTRACELLULAR SIGNAL-REGULATED COMPND 5 KINASE 2, ERK-2, MAP KINASE ISOFORM P42, P42-MAPK, MITOGEN-ACTIVATED COMPND 6 PROTEIN KINASE 2, MAP KINASE 2, MAPK 2; COMPND 7 EC: 2.7.11.24; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 STRAIN: HUMAN; SOURCE 6 GENE: ERK2, MAPK1, PRKM1, PRKM2; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PT7BLUE KEYWDS TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.N.KANG,J.A.STUCKEY,X.XIE REVDAT 2 24-SEP-14 4FV3 1 AUTHOR REVDAT 1 29-AUG-12 4FV3 0 JRNL AUTH Y.N.KANG,J.A.STUCKEY,X.XIE JRNL TITL CRYSTAL STRUCTURE OF THE ERK2 COMPLEXED WITH EK6 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.1 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.93 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 19364 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.194 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.236 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.110 REMARK 3 FREE R VALUE TEST SET COUNT : 990 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.32 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.73 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2770 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2224 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2636 REMARK 3 BIN R VALUE (WORKING SET) : 0.2204 REMARK 3 BIN FREE R VALUE : 0.2635 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.84 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 134 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2803 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 66 REMARK 3 SOLVENT ATOMS : 169 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.09 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.85010 REMARK 3 B22 (A**2) : 0.20430 REMARK 3 B33 (A**2) : -1.05440 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 1.89000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.278 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.277 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.941 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.917 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 2958 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 4013 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1357 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 71 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 454 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 2958 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 377 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 3508 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 0.95 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.48 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 2.89 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: {A|9 - 117} REMARK 3 ORIGIN FOR THE GROUP (A): 17.8051 4.2103 23.3732 REMARK 3 T TENSOR REMARK 3 T11: 0.0219 T22: -0.0106 REMARK 3 T33: -0.0519 T12: 0.0281 REMARK 3 T13: -0.0499 T23: -0.0710 REMARK 3 L TENSOR REMARK 3 L11: 0.1090 L22: 0.0000 REMARK 3 L33: 1.4574 L12: 0.0242 REMARK 3 L13: 0.0197 L23: 0.3893 REMARK 3 S TENSOR REMARK 3 S11: -0.0008 S12: -0.0156 S13: 0.0308 REMARK 3 S21: 0.0938 S22: 0.0024 S23: -0.0351 REMARK 3 S31: -0.0416 S32: 0.0317 S33: -0.0016 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: {A|118 - 335} REMARK 3 ORIGIN FOR THE GROUP (A): 4.0062 -1.0580 0.9522 REMARK 3 T TENSOR REMARK 3 T11: -0.0860 T22: -0.0604 REMARK 3 T33: -0.0099 T12: -0.0071 REMARK 3 T13: 0.0077 T23: -0.0126 REMARK 3 L TENSOR REMARK 3 L11: 1.9116 L22: 1.0595 REMARK 3 L33: 0.9150 L12: -0.8147 REMARK 3 L13: 0.6444 L23: -0.2764 REMARK 3 S TENSOR REMARK 3 S11: -0.0493 S12: -0.0030 S13: 0.0568 REMARK 3 S21: -0.0231 S22: 0.0415 S23: 0.0096 REMARK 3 S31: 0.0463 S32: -0.0395 S33: 0.0078 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: {A|336 - 355} REMARK 3 ORIGIN FOR THE GROUP (A): 7.1993 -1.3757 33.7226 REMARK 3 T TENSOR REMARK 3 T11: 0.0195 T22: 0.0095 REMARK 3 T33: -0.0221 T12: -0.0024 REMARK 3 T13: -0.0073 T23: -0.0165 REMARK 3 L TENSOR REMARK 3 L11: -0.0894 L22: 0.1334 REMARK 3 L33: 0.2980 L12: -0.0155 REMARK 3 L13: 0.0705 L23: 0.2470 REMARK 3 S TENSOR REMARK 3 S11: 0.0005 S12: -0.0023 S13: -0.0046 REMARK 3 S21: 0.0082 S22: -0.0012 S23: -0.0008 REMARK 3 S31: 0.0051 S32: -0.0048 S33: 0.0007 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4FV3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-JUL-12. REMARK 100 THE RCSB ID CODE IS RCSB073392. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IIC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19388 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 120.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.26 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.22100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.18 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM MES BUFFER, PH 6.5, 26-28% PEG- REMARK 280 MME 2000, 200 MM AMMONIUM SULFATE AND 20 MM 2-MERCAPTOETHANOL, REMARK 280 VAPOR DIFFUSION, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 35.35000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -1 REMARK 465 ALA A 0 REMARK 465 ALA A 1 REMARK 465 ALA A 2 REMARK 465 ALA A 3 REMARK 465 ALA A 4 REMARK 465 ALA A 5 REMARK 465 GLY A 6 REMARK 465 ALA A 7 REMARK 465 GLY A 8 REMARK 465 TYR A 356 REMARK 465 ARG A 357 REMARK 465 SER A 358 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 10 CG CD OE1 OE2 REMARK 470 GLN A 64 CG CD OE1 NE2 REMARK 470 ARG A 275 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 328 CG CD CE NZ REMARK 470 ASP A 330 CG OD1 OD2 REMARK 470 MET A 331 CG SD CE REMARK 470 GLU A 332 CG CD OE1 OE2 REMARK 470 ASP A 335 CG OD1 OD2 REMARK 470 LYS A 338 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 29 -67.15 -122.68 REMARK 500 TYR A 34 26.18 -143.84 REMARK 500 ASP A 147 38.55 -146.35 REMARK 500 ASP A 165 92.27 62.18 REMARK 500 ASN A 199 22.51 -160.29 REMARK 500 LEU A 292 44.58 -99.63 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EK6 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 407 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4FUX RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE ERK2 COMPLEXED WITH E75 REMARK 900 RELATED ID: 4FUY RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE ERK2 COMPLEXED WITH EK2 REMARK 900 RELATED ID: 4FV0 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE ERK2 COMPLEXED WITH EK3 REMARK 900 RELATED ID: 4FV1 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE ERK2 COMPLEXED WITH EK4 REMARK 900 RELATED ID: 4FV2 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE ERK2 COMPLEXED WITH EK5 REMARK 900 RELATED ID: 4FV4 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE ERK2 COMPLEXED WITH EK7 REMARK 900 RELATED ID: 4FV5 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE ERK2 COMPLEXED WITH EK9 REMARK 900 RELATED ID: 4FV6 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE ERK2 COMPLEXED WITH E57 REMARK 900 RELATED ID: 4FV7 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE ERK2 COMPLEXED WITH E94 REMARK 900 RELATED ID: 4FV8 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE ERK2 COMPLEXED WITH E63 REMARK 900 RELATED ID: 4FV9 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE ERK2 COMPLEXED WITH E71 DBREF 4FV3 A -1 358 UNP P28482 MK01_HUMAN 1 360 SEQRES 1 A 360 MET ALA ALA ALA ALA ALA ALA GLY ALA GLY PRO GLU MET SEQRES 2 A 360 VAL ARG GLY GLN VAL PHE ASP VAL GLY PRO ARG TYR THR SEQRES 3 A 360 ASN LEU SER TYR ILE GLY GLU GLY ALA TYR GLY MET VAL SEQRES 4 A 360 CYS SER ALA TYR ASP ASN VAL ASN LYS VAL ARG VAL ALA SEQRES 5 A 360 ILE LYS LYS ILE SER PRO PHE GLU HIS GLN THR TYR CYS SEQRES 6 A 360 GLN ARG THR LEU ARG GLU ILE LYS ILE LEU LEU ARG PHE SEQRES 7 A 360 ARG HIS GLU ASN ILE ILE GLY ILE ASN ASP ILE ILE ARG SEQRES 8 A 360 ALA PRO THR ILE GLU GLN MET LYS ASP VAL TYR ILE VAL SEQRES 9 A 360 GLN ASP LEU MET GLU THR ASP LEU TYR LYS LEU LEU LYS SEQRES 10 A 360 THR GLN HIS LEU SER ASN ASP HIS ILE CYS TYR PHE LEU SEQRES 11 A 360 TYR GLN ILE LEU ARG GLY LEU LYS TYR ILE HIS SER ALA SEQRES 12 A 360 ASN VAL LEU HIS ARG ASP LEU LYS PRO SER ASN LEU LEU SEQRES 13 A 360 LEU ASN THR THR CME ASP LEU LYS ILE CYS ASP PHE GLY SEQRES 14 A 360 LEU ALA ARG VAL ALA ASP PRO ASP HIS ASP HIS THR GLY SEQRES 15 A 360 PHE LEU THR GLU TYR VAL ALA THR ARG TRP TYR ARG ALA SEQRES 16 A 360 PRO GLU ILE MET LEU ASN SER LYS GLY TYR THR LYS SER SEQRES 17 A 360 ILE ASP ILE TRP SER VAL GLY CYS ILE LEU ALA GLU MET SEQRES 18 A 360 LEU SER ASN ARG PRO ILE PHE PRO GLY LYS HIS TYR LEU SEQRES 19 A 360 ASP GLN LEU ASN HIS ILE LEU GLY ILE LEU GLY SER PRO SEQRES 20 A 360 SER GLN GLU ASP LEU ASN CYS ILE ILE ASN LEU LYS ALA SEQRES 21 A 360 ARG ASN TYR LEU LEU SER LEU PRO HIS LYS ASN LYS VAL SEQRES 22 A 360 PRO TRP ASN ARG LEU PHE PRO ASN ALA ASP SER LYS ALA SEQRES 23 A 360 LEU ASP LEU LEU ASP LYS MET LEU THR PHE ASN PRO HIS SEQRES 24 A 360 LYS ARG ILE GLU VAL GLU GLN ALA LEU ALA HIS PRO TYR SEQRES 25 A 360 LEU GLU GLN TYR TYR ASP PRO SER ASP GLU PRO ILE ALA SEQRES 26 A 360 GLU ALA PRO PHE LYS PHE ASP MET GLU LEU ASP ASP LEU SEQRES 27 A 360 PRO LYS GLU LYS LEU LYS GLU LEU ILE PHE GLU GLU THR SEQRES 28 A 360 ALA ARG PHE GLN PRO GLY TYR ARG SER MODRES 4FV3 CME A 159 CYS S,S-(2-HYDROXYETHYL)THIOCYSTEINE HET CME A 159 10 HET EK6 A 401 47 HET SO4 A 402 5 HET SO4 A 403 5 HET SO4 A 404 5 HET EDO A 405 4 HET EDO A 406 4 HET EDO A 407 4 HETNAM CME S,S-(2-HYDROXYETHYL)THIOCYSTEINE HETNAM EK6 ETHYL N-{2-CHLORO-4-[5-(5-{[(1S)-1-(3-CHLORO-4- HETNAM 2 EK6 FLUOROPHENYL)-2-HYDROXYETHYL]CARBAMOYL}-1H-PYRROL-3- HETNAM 3 EK6 YL)-1H-PYRAZOL-4-YL]BENZYL}GLYCINATE HETNAM SO4 SULFATE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 1 CME C5 H11 N O3 S2 FORMUL 2 EK6 C27 H26 CL2 F N5 O4 FORMUL 3 SO4 3(O4 S 2-) FORMUL 6 EDO 3(C2 H6 O2) FORMUL 9 HOH *169(H2 O) HELIX 1 1 HIS A 59 PHE A 76 1 18 HELIX 2 2 LEU A 110 GLN A 117 1 8 HELIX 3 3 SER A 120 ALA A 141 1 22 HELIX 4 4 LYS A 149 SER A 151 5 3 HELIX 5 5 ASP A 173 ASP A 177 5 5 HELIX 6 6 THR A 188 ARG A 192 5 5 HELIX 7 7 ALA A 193 ASN A 199 1 7 HELIX 8 8 LYS A 205 ASN A 222 1 18 HELIX 9 9 HIS A 230 GLY A 243 1 14 HELIX 10 10 SER A 246 CYS A 252 1 7 HELIX 11 11 ASN A 255 LEU A 265 1 11 HELIX 12 12 PRO A 272 PHE A 277 1 6 HELIX 13 13 ASP A 281 LEU A 292 1 12 HELIX 14 14 GLU A 301 ALA A 307 1 7 HELIX 15 15 HIS A 308 GLU A 312 5 5 HELIX 16 16 ASP A 316 GLU A 320 5 5 HELIX 17 17 PRO A 337 THR A 349 1 13 HELIX 18 18 ALA A 350 GLN A 353 5 4 SHEET 1 A 5 TYR A 23 GLU A 31 0 SHEET 2 A 5 GLY A 35 ASP A 42 -1 O TYR A 41 N THR A 24 SHEET 3 A 5 ARG A 48 ILE A 54 -1 O LYS A 53 N MET A 36 SHEET 4 A 5 VAL A 99 GLN A 103 -1 O GLN A 103 N ALA A 50 SHEET 5 A 5 ASP A 86 ILE A 88 -1 N ASP A 86 O VAL A 102 SHEET 1 B 3 THR A 108 ASP A 109 0 SHEET 2 B 3 LEU A 153 LEU A 155 -1 O LEU A 155 N THR A 108 SHEET 3 B 3 LEU A 161 ILE A 163 -1 O LYS A 162 N LEU A 154 SHEET 1 C 2 VAL A 143 LEU A 144 0 SHEET 2 C 2 ARG A 170 VAL A 171 -1 O ARG A 170 N LEU A 144 LINK C THR A 158 N CME A 159 1555 1555 1.33 LINK C CME A 159 N ASP A 160 1555 1555 1.36 CISPEP 1 GLY A 20 PRO A 21 0 2.93 SITE 1 AC1 24 ILE A 29 GLY A 30 GLU A 31 GLY A 32 SITE 2 AC1 24 GLY A 35 VAL A 37 ALA A 50 LYS A 52 SITE 3 AC1 24 ILE A 82 GLN A 103 ASP A 104 MET A 106 SITE 4 AC1 24 ASP A 109 TYR A 111 SER A 151 ASN A 152 SITE 5 AC1 24 LEU A 154 CYS A 164 ASP A 165 EDO A 405 SITE 6 AC1 24 HOH A 650 HOH A 657 HOH A 661 HOH A 662 SITE 1 AC2 6 TYR A 185 ARG A 189 ARG A 192 TYR A 231 SITE 2 AC2 6 HOH A 579 HOH A 596 SITE 1 AC3 4 LYS A 205 GLU A 301 HOH A 611 HOH A 627 SITE 1 AC4 1 ARG A 189 SITE 1 AC5 4 LYS A 149 SER A 151 THR A 188 EK6 A 401 SITE 1 AC6 1 TYR A 314 SITE 1 AC7 5 LEU A 114 LYS A 115 THR A 116 HIS A 118 SITE 2 AC7 5 ASN A 222 CRYST1 48.780 70.700 60.860 90.00 110.11 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020500 0.000000 0.007506 0.00000 SCALE2 0.000000 0.014144 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017498 0.00000