HEADER OXIDOREDUCTASE 19-NOV-14 4D73 TITLE X-RAY STRUCTURE OF A PEROXIREDOXIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: 1-CYS PEROXIREDOXIN; COMPND 3 CHAIN: A; COMPND 4 EC: 1.11.1.15; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: 1-CYS PEROXIREDOXIN; COMPND 9 CHAIN: B; COMPND 10 EC: 1.11.1.15; COMPND 11 ENGINEERED: YES; COMPND 12 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PLASMODIUM FALCIPARUM; SOURCE 3 ORGANISM_COMMON: MALARIA PARASITE P. FALCIPARUM; SOURCE 4 ORGANISM_TAXID: 5833; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: XL1-BLUE; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PQE30; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: PLASMODIUM FALCIPARUM; SOURCE 12 ORGANISM_COMMON: MALARIA PARASITE P. FALCIPARUM; SOURCE 13 ORGANISM_TAXID: 5833; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 16 EXPRESSION_SYSTEM_STRAIN: XL1-BLUE; SOURCE 17 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 18 EXPRESSION_SYSTEM_PLASMID: PQE30 KEYWDS OXIDOREDUCTASE, ANTIOXIDANT PROTEIN, PRX5, REDOX REGULATION EXPDTA X-RAY DIFFRACTION AUTHOR V.STAUDACHER,C.F.DJUIKA,J.KODUKA,S.SCHLOSSAREK,J.KOPP,M.BUECHLER, AUTHOR 2 M.LANZER,M.DEPONTE REVDAT 6 20-DEC-23 4D73 1 JRNL REVDAT 5 08-MAY-19 4D73 1 REMARK REVDAT 4 06-MAR-19 4D73 1 REMARK LINK REVDAT 3 05-AUG-15 4D73 1 JRNL REVDAT 2 20-MAY-15 4D73 1 JRNL REVDAT 1 13-MAY-15 4D73 0 JRNL AUTH V.STAUDACHER,C.F.DJUIKA,J.KODUKA,S.SCHLOSSAREK,J.KOPP, JRNL AUTH 2 M.BUECHLER,M.LANZER,M.DEPONTE JRNL TITL PLASMODIUM FALCIPARUM ANTIOXIDANT PROTEIN REVEALS A NOVEL JRNL TITL 2 MECHANISM FOR BALANCING TURNOVER AND INACTIVATION OF JRNL TITL 3 PEROXIREDOXINS JRNL REF FREE RADIC.BIOL.MED. V. 85 228 2015 JRNL REFN ISSN 0891-5849 JRNL PMID 25952724 JRNL DOI 10.1016/J.FREERADBIOMED.2015.04.030 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.40 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 33206 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.154 REMARK 3 R VALUE (WORKING SET) : 0.152 REMARK 3 FREE R VALUE : 0.195 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1662 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 30.4044 - 4.1179 0.99 2785 165 0.1582 0.1705 REMARK 3 2 4.1179 - 3.2697 1.00 2702 137 0.1314 0.1866 REMARK 3 3 3.2697 - 2.8568 0.99 2674 110 0.1429 0.1528 REMARK 3 4 2.8568 - 2.5957 1.00 2648 120 0.1477 0.1879 REMARK 3 5 2.5957 - 2.4098 0.99 2646 130 0.1427 0.2169 REMARK 3 6 2.4098 - 2.2677 1.00 2635 119 0.1443 0.2237 REMARK 3 7 2.2677 - 2.1542 0.99 2599 140 0.1465 0.2299 REMARK 3 8 2.1542 - 2.0604 0.99 2614 133 0.1509 0.1948 REMARK 3 9 2.0604 - 1.9811 0.99 2542 163 0.1642 0.2019 REMARK 3 10 1.9811 - 1.9128 0.99 2581 158 0.1795 0.2349 REMARK 3 11 1.9128 - 1.8530 0.99 2574 138 0.1982 0.2453 REMARK 3 12 1.8530 - 1.8000 1.00 2544 149 0.2180 0.2807 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.600 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 19.55 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 2905 REMARK 3 ANGLE : 1.208 3918 REMARK 3 CHIRALITY : 0.048 426 REMARK 3 PLANARITY : 0.007 501 REMARK 3 DIHEDRAL : 13.106 1104 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 16 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 59 THROUGH 68 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.0002 5.2506 -5.2477 REMARK 3 T TENSOR REMARK 3 T11: 0.2050 T22: 0.2721 REMARK 3 T33: 0.3035 T12: 0.0834 REMARK 3 T13: 0.0427 T23: 0.0468 REMARK 3 L TENSOR REMARK 3 L11: 9.1482 L22: 4.4812 REMARK 3 L33: 2.2495 L12: -1.1229 REMARK 3 L13: 0.8975 L23: -1.6522 REMARK 3 S TENSOR REMARK 3 S11: 0.0352 S12: 0.7860 S13: -0.1022 REMARK 3 S21: -0.1902 S22: 0.1585 S23: 0.5124 REMARK 3 S31: -0.3437 S32: -0.6075 S33: -0.1623 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 69 THROUGH 78 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.6195 6.3333 8.1453 REMARK 3 T TENSOR REMARK 3 T11: 0.3121 T22: 0.1586 REMARK 3 T33: 0.1818 T12: -0.0787 REMARK 3 T13: 0.0598 T23: -0.0637 REMARK 3 L TENSOR REMARK 3 L11: 2.0992 L22: 4.9745 REMARK 3 L33: 8.3206 L12: -0.1134 REMARK 3 L13: -1.6163 L23: 0.2680 REMARK 3 S TENSOR REMARK 3 S11: 0.0455 S12: -0.4141 S13: 0.2206 REMARK 3 S21: 0.0832 S22: 0.0328 S23: -0.1177 REMARK 3 S31: -0.6184 S32: 0.8159 S33: -0.0842 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 79 THROUGH 108 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.0704 6.9842 2.3438 REMARK 3 T TENSOR REMARK 3 T11: 0.2786 T22: 0.1571 REMARK 3 T33: 0.2550 T12: -0.0365 REMARK 3 T13: 0.0630 T23: -0.0014 REMARK 3 L TENSOR REMARK 3 L11: 2.7193 L22: 1.7572 REMARK 3 L33: 1.1352 L12: 0.3757 REMARK 3 L13: -0.8944 L23: -0.0545 REMARK 3 S TENSOR REMARK 3 S11: 0.1349 S12: -0.1859 S13: 0.3886 REMARK 3 S21: 0.1592 S22: 0.0076 S23: 0.0416 REMARK 3 S31: -0.5079 S32: 0.1064 S33: -0.0895 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 109 THROUGH 139 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.9971 -6.9210 -4.1206 REMARK 3 T TENSOR REMARK 3 T11: 0.1423 T22: 0.1632 REMARK 3 T33: 0.1609 T12: -0.0033 REMARK 3 T13: 0.0225 T23: -0.0089 REMARK 3 L TENSOR REMARK 3 L11: 0.8599 L22: 3.8962 REMARK 3 L33: 2.8415 L12: 0.3504 REMARK 3 L13: -0.3716 L23: -2.2153 REMARK 3 S TENSOR REMARK 3 S11: -0.0554 S12: 0.0828 S13: -0.0411 REMARK 3 S21: -0.3118 S22: -0.0772 S23: -0.2409 REMARK 3 S31: 0.1005 S32: 0.1838 S33: 0.1552 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 140 THROUGH 172 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.0793 -2.8638 6.8329 REMARK 3 T TENSOR REMARK 3 T11: 0.1457 T22: 0.1610 REMARK 3 T33: 0.1579 T12: -0.0324 REMARK 3 T13: 0.0065 T23: -0.0148 REMARK 3 L TENSOR REMARK 3 L11: 1.6049 L22: 2.4107 REMARK 3 L33: 3.7184 L12: -0.1090 REMARK 3 L13: -0.9697 L23: -0.7866 REMARK 3 S TENSOR REMARK 3 S11: 0.0227 S12: -0.0638 S13: 0.0742 REMARK 3 S21: 0.0703 S22: -0.0616 S23: -0.1891 REMARK 3 S31: -0.1022 S32: 0.3243 S33: 0.0146 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 173 THROUGH 183 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.8872 -3.1775 3.4847 REMARK 3 T TENSOR REMARK 3 T11: 0.1298 T22: 0.2600 REMARK 3 T33: 0.2384 T12: 0.0489 REMARK 3 T13: 0.0173 T23: 0.0238 REMARK 3 L TENSOR REMARK 3 L11: 0.8483 L22: 6.2792 REMARK 3 L33: 1.9802 L12: 1.0789 REMARK 3 L13: 0.1862 L23: -1.3152 REMARK 3 S TENSOR REMARK 3 S11: 0.0202 S12: 0.0821 S13: 0.2430 REMARK 3 S21: -0.0607 S22: 0.1698 S23: 0.4371 REMARK 3 S31: -0.2176 S32: -0.3843 S33: -0.1215 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 184 THROUGH 227 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.3350 -9.7356 -1.4136 REMARK 3 T TENSOR REMARK 3 T11: 0.1389 T22: 0.1802 REMARK 3 T33: 0.1617 T12: 0.0032 REMARK 3 T13: -0.0110 T23: 0.0029 REMARK 3 L TENSOR REMARK 3 L11: 1.3141 L22: 1.6890 REMARK 3 L33: 2.5904 L12: 0.8268 REMARK 3 L13: -0.1826 L23: -0.5674 REMARK 3 S TENSOR REMARK 3 S11: 0.0086 S12: 0.1178 S13: 0.0531 REMARK 3 S21: -0.1388 S22: 0.0768 S23: 0.1687 REMARK 3 S31: 0.1027 S32: -0.2405 S33: -0.0549 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 228 THROUGH 238 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.9861 -7.9764 -16.7732 REMARK 3 T TENSOR REMARK 3 T11: 0.3925 T22: 0.3181 REMARK 3 T33: 0.2198 T12: 0.0381 REMARK 3 T13: 0.0645 T23: -0.0294 REMARK 3 L TENSOR REMARK 3 L11: 8.6720 L22: 2.8554 REMARK 3 L33: 2.6617 L12: -0.2082 REMARK 3 L13: 1.1420 L23: -2.6532 REMARK 3 S TENSOR REMARK 3 S11: 0.1760 S12: 0.8724 S13: 0.2040 REMARK 3 S21: -1.1177 S22: -0.3730 S23: -0.6694 REMARK 3 S31: 0.3267 S32: -0.3911 S33: 0.1056 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 63 THROUGH 77 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.7452 -21.7555 24.5361 REMARK 3 T TENSOR REMARK 3 T11: 0.3488 T22: 0.1351 REMARK 3 T33: 0.1992 T12: -0.1039 REMARK 3 T13: 0.0322 T23: 0.0029 REMARK 3 L TENSOR REMARK 3 L11: 5.9998 L22: 1.9115 REMARK 3 L33: 3.9265 L12: -0.9474 REMARK 3 L13: -1.5172 L23: -0.0024 REMARK 3 S TENSOR REMARK 3 S11: -0.2467 S12: 0.0826 S13: -0.0330 REMARK 3 S21: -0.0351 S22: 0.0725 S23: 0.0381 REMARK 3 S31: 0.6909 S32: -0.2842 S33: 0.2077 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 78 THROUGH 89 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.8092 -27.8162 16.9023 REMARK 3 T TENSOR REMARK 3 T11: 0.3305 T22: 0.2137 REMARK 3 T33: 0.2188 T12: 0.0262 REMARK 3 T13: 0.0932 T23: 0.0054 REMARK 3 L TENSOR REMARK 3 L11: 2.6505 L22: 1.8892 REMARK 3 L33: 5.9174 L12: 0.6793 REMARK 3 L13: -3.9605 L23: -1.0500 REMARK 3 S TENSOR REMARK 3 S11: -0.0724 S12: -0.0743 S13: -0.0589 REMARK 3 S21: 0.3310 S22: -0.0778 S23: 0.1552 REMARK 3 S31: 0.1492 S32: 0.4138 S33: 0.0604 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 90 THROUGH 108 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.6659 -22.3529 29.0304 REMARK 3 T TENSOR REMARK 3 T11: 0.3950 T22: 0.1808 REMARK 3 T33: 0.2092 T12: -0.1031 REMARK 3 T13: 0.0121 T23: 0.0134 REMARK 3 L TENSOR REMARK 3 L11: 1.2085 L22: 1.0461 REMARK 3 L33: 2.2101 L12: -0.3594 REMARK 3 L13: -0.0892 L23: -0.2952 REMARK 3 S TENSOR REMARK 3 S11: -0.1072 S12: -0.0290 S13: -0.2181 REMARK 3 S21: -0.0600 S22: 0.1141 S23: 0.3278 REMARK 3 S31: 0.8284 S32: -0.4751 S33: 0.0090 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 109 THROUGH 127 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.7430 -8.6171 28.1980 REMARK 3 T TENSOR REMARK 3 T11: 0.1585 T22: 0.2205 REMARK 3 T33: 0.2085 T12: -0.0285 REMARK 3 T13: -0.0013 T23: -0.0009 REMARK 3 L TENSOR REMARK 3 L11: 0.7239 L22: 2.9513 REMARK 3 L33: 4.6302 L12: -0.6709 REMARK 3 L13: -0.2762 L23: -1.7311 REMARK 3 S TENSOR REMARK 3 S11: -0.0726 S12: 0.0315 S13: 0.0706 REMARK 3 S21: 0.1125 S22: -0.1199 S23: -0.3384 REMARK 3 S31: -0.0330 S32: 0.3105 S33: 0.1935 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 128 THROUGH 139 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.4503 -20.0924 40.4376 REMARK 3 T TENSOR REMARK 3 T11: 0.3302 T22: 0.2619 REMARK 3 T33: 0.2253 T12: 0.0710 REMARK 3 T13: -0.0185 T23: 0.0516 REMARK 3 L TENSOR REMARK 3 L11: 5.3545 L22: 5.3412 REMARK 3 L33: 6.6852 L12: 1.8638 REMARK 3 L13: -0.7168 L23: -0.9859 REMARK 3 S TENSOR REMARK 3 S11: -0.1348 S12: -0.8310 S13: -0.4998 REMARK 3 S21: 0.7742 S22: -0.0783 S23: -0.4253 REMARK 3 S31: 0.4243 S32: 0.3379 S33: 0.1281 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 140 THROUGH 172 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.2699 -15.5732 22.3598 REMARK 3 T TENSOR REMARK 3 T11: 0.1464 T22: 0.1252 REMARK 3 T33: 0.1334 T12: 0.0017 REMARK 3 T13: 0.0231 T23: -0.0105 REMARK 3 L TENSOR REMARK 3 L11: 1.5685 L22: 2.7020 REMARK 3 L33: 4.5854 L12: 0.1508 REMARK 3 L13: 0.2399 L23: -1.1433 REMARK 3 S TENSOR REMARK 3 S11: -0.0661 S12: 0.0311 S13: -0.0617 REMARK 3 S21: -0.0619 S22: -0.0799 S23: -0.1042 REMARK 3 S31: 0.3576 S32: 0.2083 S33: 0.0946 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 173 THROUGH 220 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.2787 -5.0912 29.0497 REMARK 3 T TENSOR REMARK 3 T11: 0.1526 T22: 0.2036 REMARK 3 T33: 0.1592 T12: 0.0056 REMARK 3 T13: 0.0325 T23: -0.0147 REMARK 3 L TENSOR REMARK 3 L11: 0.8767 L22: 2.1823 REMARK 3 L33: 4.1801 L12: -0.2881 REMARK 3 L13: -0.1437 L23: -1.4845 REMARK 3 S TENSOR REMARK 3 S11: -0.0791 S12: -0.1018 S13: 0.0073 REMARK 3 S21: 0.1825 S22: 0.1485 S23: 0.1799 REMARK 3 S31: -0.2484 S32: -0.5071 S33: -0.0840 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 221 THROUGH 237 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.6312 -6.5321 41.4319 REMARK 3 T TENSOR REMARK 3 T11: 0.2341 T22: 0.2740 REMARK 3 T33: 0.1543 T12: -0.0413 REMARK 3 T13: -0.0271 T23: -0.0434 REMARK 3 L TENSOR REMARK 3 L11: 4.1214 L22: 7.2771 REMARK 3 L33: 5.1104 L12: -0.4133 REMARK 3 L13: -0.5061 L23: -3.7496 REMARK 3 S TENSOR REMARK 3 S11: -0.1311 S12: -0.5037 S13: -0.0663 REMARK 3 S21: 0.8685 S22: -0.0267 S23: -0.2931 REMARK 3 S31: -0.5456 S32: 0.0307 S33: 0.1243 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: RESIDUES A80-A86 AND B115-B119 ARE REMARK 3 DISORDERED REMARK 4 REMARK 4 4D73 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 19-NOV-14. REMARK 100 THE DEPOSITION ID IS D_1290061660. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-APR-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97239 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 157758 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 30.400 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 4.700 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.84 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 4.90 REMARK 200 R MERGE FOR SHELL (I) : 0.47000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1XIY REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PFAOPL109M WAS CRYSTALLIZED BY SITTING REMARK 280 DROP VAPOR DIFFUSION AT 277 K WITH A RESERVOIR COMPOSITION OF REMARK 280 0.1 M SODIUM CITRATE PH 5.6, 13 % W/V PEG 4000, AND 18% V/V 2- REMARK 280 PROPANOL. CRYSTALLIZATION DROPS CONTAINED 250 NL 15 MG/ML REMARK 280 PFAOPL109M MIXED WITH 500 NL RESERVOIR SOLUTION., VAPOR REMARK 280 DIFFUSION, SITTING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 20.70950 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 54.87550 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.68300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 54.87550 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 20.70950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 38.68300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1750 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15730 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.9 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A 79 REMARK 465 ILE A 80 REMARK 465 SER A 81 REMARK 465 ASP A 82 REMARK 465 THR A 83 REMARK 465 ASP A 84 REMARK 465 GLY A 85 REMARK 465 SER A 86 REMARK 465 ILE B 59 REMARK 465 LYS B 60 REMARK 465 GLU B 61 REMARK 465 ASN B 62 REMARK 465 PRO B 115 REMARK 465 THR B 116 REMARK 465 CYS B 117 REMARK 465 SER B 118 REMARK 465 THR B 119 REMARK 465 ASN B 238 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 120 -61.04 -124.81 REMARK 500 ASP A 169 50.34 -91.67 REMARK 500 ASP A 224 -64.42 -149.37 REMARK 500 ASP B 89 79.74 -102.74 REMARK 500 ASP B 224 -71.73 -156.64 REMARK 500 REMARK 500 REMARK: NULL DBREF 4D73 A 59 238 UNP Q5MYR6 Q5MYR6_PLAF7 59 238 DBREF 4D73 B 59 238 UNP Q5MYR6 Q5MYR6_PLAF7 59 238 SEQADV 4D73 MET A 109 UNP Q5MYR6 LEU 109 ENGINEERED MUTATION SEQADV 4D73 ASP A 176 UNP Q5MYR6 GLU 176 CONFLICT SEQADV 4D73 MET B 109 UNP Q5MYR6 LEU 109 ENGINEERED MUTATION SEQADV 4D73 ASP B 176 UNP Q5MYR6 GLU 176 CONFLICT SEQRES 1 A 180 ILE LYS GLU ASN ASP LEU ILE PRO ASN VAL LYS VAL MET SEQRES 2 A 180 ILE ASP VAL ARG ASN MET ASN ASN ILE SER ASP THR ASP SEQRES 3 A 180 GLY SER PRO ASN ASP PHE THR SER ILE ASP THR HIS GLU SEQRES 4 A 180 LEU PHE ASN ASN LYS LYS ILE LEU LEU ILE SER MET PRO SEQRES 5 A 180 GLY ALA PHE THR PRO THR OCS SER THR LYS MET ILE PRO SEQRES 6 A 180 GLY TYR GLU GLU GLU TYR ASP TYR PHE ILE LYS GLU ASN SEQRES 7 A 180 ASN PHE ASP ASP ILE TYR CYS ILE THR ASN ASN ASP ILE SEQRES 8 A 180 TYR VAL LEU LYS SER TRP PHE LYS SER MET ASP ILE LYS SEQRES 9 A 180 LYS ILE LYS TYR ILE SER ASP GLY ASN SER SER PHE THR SEQRES 10 A 180 ASP SER MET ASN MET LEU VAL ASP LYS SER ASN PHE PHE SEQRES 11 A 180 MET GLY MET ARG PRO TRP ARG PHE VAL ALA ILE VAL GLU SEQRES 12 A 180 ASN ASN ILE LEU VAL LYS MET PHE GLN GLU LYS ASP LYS SEQRES 13 A 180 GLN HIS ASN ILE GLN THR ASP PRO TYR ASP ILE SER THR SEQRES 14 A 180 VAL ASN ASN VAL LYS GLU PHE LEU LYS ASN ASN SEQRES 1 B 180 ILE LYS GLU ASN ASP LEU ILE PRO ASN VAL LYS VAL MET SEQRES 2 B 180 ILE ASP VAL ARG ASN MET ASN ASN ILE SER ASP THR ASP SEQRES 3 B 180 GLY SER PRO ASN ASP PHE THR SER ILE ASP THR HIS GLU SEQRES 4 B 180 LEU PHE ASN ASN LYS LYS ILE LEU LEU ILE SER MET PRO SEQRES 5 B 180 GLY ALA PHE THR PRO THR CYS SER THR LYS MET ILE PRO SEQRES 6 B 180 GLY TYR GLU GLU GLU TYR ASP TYR PHE ILE LYS GLU ASN SEQRES 7 B 180 ASN PHE ASP ASP ILE TYR CYS ILE THR ASN ASN ASP ILE SEQRES 8 B 180 TYR VAL LEU LYS SER TRP PHE LYS SER MET ASP ILE LYS SEQRES 9 B 180 LYS ILE LYS TYR ILE SER ASP GLY ASN SER SER PHE THR SEQRES 10 B 180 ASP SER MET ASN MET LEU VAL ASP LYS SER ASN PHE PHE SEQRES 11 B 180 MET GLY MET ARG PRO TRP ARG PHE VAL ALA ILE VAL GLU SEQRES 12 B 180 ASN ASN ILE LEU VAL LYS MET PHE GLN GLU LYS ASP LYS SEQRES 13 B 180 GLN HIS ASN ILE GLN THR ASP PRO TYR ASP ILE SER THR SEQRES 14 B 180 VAL ASN ASN VAL LYS GLU PHE LEU LYS ASN ASN MODRES 4D73 OCS A 117 CYS CYSTEINESULFONIC ACID HET OCS A 117 9 HETNAM OCS CYSTEINESULFONIC ACID FORMUL 1 OCS C3 H7 N O5 S FORMUL 3 HOH *234(H2 O) HELIX 1 1 VAL A 74 ASN A 78 1 5 HELIX 2 2 THR A 95 PHE A 99 1 5 HELIX 3 3 THR A 114 LYS A 120 1 7 HELIX 4 4 LYS A 120 GLU A 128 1 9 HELIX 5 5 GLU A 128 ASN A 136 1 9 HELIX 6 6 ASP A 148 ASP A 160 1 13 HELIX 7 7 SER A 172 MET A 178 1 7 HELIX 8 8 SER A 185 PHE A 188 5 4 HELIX 9 9 THR A 227 ASN A 238 1 12 HELIX 10 10 VAL B 74 ASN B 78 1 5 HELIX 11 11 THR B 95 PHE B 99 1 5 HELIX 12 12 LYS B 120 GLU B 128 1 9 HELIX 13 13 GLU B 128 ASN B 136 1 9 HELIX 14 14 ASP B 148 MET B 159 1 12 HELIX 15 15 SER B 172 MET B 178 1 7 HELIX 16 16 SER B 185 PHE B 188 5 4 HELIX 17 17 THR B 227 ASN B 237 1 11 SHEET 1 AA 7 PHE A 90 ASP A 94 0 SHEET 2 AA 7 LYS A 69 ASP A 73 -1 O VAL A 70 N ILE A 93 SHEET 3 AA 7 LYS A 165 SER A 168 -1 O TYR A 166 N ASP A 73 SHEET 4 AA 7 ASP A 140 THR A 145 1 O ILE A 141 N LYS A 165 SHEET 5 AA 7 LYS A 103 SER A 108 1 O LEU A 105 N TYR A 142 SHEET 6 AA 7 PHE A 196 GLU A 201 -1 O PHE A 196 N SER A 108 SHEET 7 AA 7 ILE A 204 GLN A 210 -1 O ILE A 204 N GLU A 201 SHEET 1 AB 2 LEU A 181 ASP A 183 0 SHEET 2 AB 2 MET A 191 PRO A 193 -1 O ARG A 192 N VAL A 182 SHEET 1 BA 2 LYS B 69 ASP B 73 0 SHEET 2 BA 2 PHE B 90 ASP B 94 -1 O THR B 91 N ILE B 72 SHEET 1 BB 5 LYS B 165 SER B 168 0 SHEET 2 BB 5 ASP B 140 THR B 145 1 O ILE B 141 N LYS B 165 SHEET 3 BB 5 LYS B 103 SER B 108 1 O LEU B 105 N TYR B 142 SHEET 4 BB 5 PHE B 196 GLU B 201 -1 O PHE B 196 N SER B 108 SHEET 5 BB 5 ILE B 204 GLN B 210 -1 O ILE B 204 N GLU B 201 SHEET 1 BC 2 LEU B 181 ASP B 183 0 SHEET 2 BC 2 MET B 191 PRO B 193 -1 O ARG B 192 N VAL B 182 LINK C THR A 116 N OCS A 117 1555 1555 1.33 LINK C OCS A 117 N SER A 118 1555 1555 1.34 CRYST1 41.419 77.366 109.751 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024144 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012926 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009112 0.00000