HEADER HYDROLASE/PROTEIN BINDING 27-JAN-11 3QIS TITLE RECOGNITION OF THE F&H MOTIF BY THE LOWE SYNDROME PROTEIN OCRL COMPND MOL_ID: 1; COMPND 2 MOLECULE: INOSITOL POLYPHOSPHATE 5-PHOSPHATASE OCRL-1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: ASH-RHOGAP (UNP RESIDUES 536-901); COMPND 5 SYNONYM: LOWE OCULOCEREBRORENAL SYNDROME PROTEIN; COMPND 6 EC: 3.1.3.36; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: PROTEIN FAM109A; COMPND 10 CHAIN: B; COMPND 11 FRAGMENT: F&H MOTIF (UNP RESIDUES 223-235); COMPND 12 SYNONYM: SES1; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: INPP5F, OCRL, OCRL1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX6P1; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 14 ORGANISM_COMMON: HUMAN; SOURCE 15 ORGANISM_TAXID: 9606 KEYWDS DENT DISEASE, RAC1, RAB GTPASES, APPL1, SES2, ENDOCYTIC PATHWAY, KEYWDS 2 GOLGI COMPLEX, HYDROLASE-PROTEIN BINDING COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.PIRRUCCELLO,L.E.SWAN,E.FOLTA-STOGNIEW,P.DE CAMILLI REVDAT 4 08-NOV-17 3QIS 1 REMARK REVDAT 3 20-JUL-11 3QIS 1 JRNL REVDAT 2 29-JUN-11 3QIS 1 JRNL REVDAT 1 15-JUN-11 3QIS 0 JRNL AUTH M.PIRRUCCELLO,L.E.SWAN,E.FOLTA-STOGNIEW,P.DE CAMILLI JRNL TITL RECOGNITION OF THE F&H MOTIF BY THE LOWE SYNDROME PROTEIN JRNL TITL 2 OCRL. JRNL REF NAT.STRUCT.MOL.BIOL. V. 18 789 2011 JRNL REFN ISSN 1545-9993 JRNL PMID 21666675 JRNL DOI 10.1038/NSMB.2071 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.6.4_486 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.05 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.8 REMARK 3 NUMBER OF REFLECTIONS : 19735 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.198 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.238 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.130 REMARK 3 FREE R VALUE TEST SET COUNT : 1012 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 24.0526 - 4.3922 0.99 2997 129 0.1701 0.1754 REMARK 3 2 4.3922 - 3.4896 0.84 2390 137 0.1815 0.2259 REMARK 3 3 3.4896 - 3.0495 0.98 2747 146 0.1995 0.2456 REMARK 3 4 3.0495 - 2.7711 0.97 2697 171 0.2160 0.2726 REMARK 3 5 2.7711 - 2.5727 0.96 2687 144 0.2248 0.2786 REMARK 3 6 2.5727 - 2.4212 0.96 2637 148 0.2312 0.3366 REMARK 3 7 2.4212 - 2.3001 0.93 2568 137 0.2485 0.3039 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.33 REMARK 3 B_SOL : 44.94 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.270 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.210 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 48.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.05600 REMARK 3 B22 (A**2) : -0.05600 REMARK 3 B33 (A**2) : 0.11210 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 2567 REMARK 3 ANGLE : 0.900 3473 REMARK 3 CHIRALITY : 0.058 382 REMARK 3 PLANARITY : 0.003 449 REMARK 3 DIHEDRAL : 15.199 977 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 563:661) REMARK 3 ORIGIN FOR THE GROUP (A): -40.4278 36.9135 41.7626 REMARK 3 T TENSOR REMARK 3 T11: 0.3472 T22: 0.1634 REMARK 3 T33: 0.2619 T12: 0.0702 REMARK 3 T13: -0.1274 T23: -0.0561 REMARK 3 L TENSOR REMARK 3 L11: 1.5152 L22: 0.9323 REMARK 3 L33: 1.8550 L12: -0.2344 REMARK 3 L13: 0.2207 L23: 0.1903 REMARK 3 S TENSOR REMARK 3 S11: -0.1410 S12: -0.0674 S13: 0.2264 REMARK 3 S21: 0.2963 S22: 0.1167 S23: -0.2932 REMARK 3 S31: -0.1226 S32: 0.1276 S33: 0.0677 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 662:696) REMARK 3 ORIGIN FOR THE GROUP (A): -36.9143 20.0468 41.0033 REMARK 3 T TENSOR REMARK 3 T11: 0.4195 T22: 0.1750 REMARK 3 T33: 0.1279 T12: 0.0959 REMARK 3 T13: -0.0751 T23: -0.0089 REMARK 3 L TENSOR REMARK 3 L11: 1.5378 L22: 3.0575 REMARK 3 L33: 2.2040 L12: -0.7077 REMARK 3 L13: 0.5292 L23: 2.1235 REMARK 3 S TENSOR REMARK 3 S11: -0.2365 S12: -0.0368 S13: 0.0407 REMARK 3 S21: 0.7873 S22: -0.0224 S23: 0.0657 REMARK 3 S31: 0.3636 S32: 0.1402 S33: 0.1938 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 730:800) REMARK 3 ORIGIN FOR THE GROUP (A): -41.3511 9.4123 22.7543 REMARK 3 T TENSOR REMARK 3 T11: 0.2664 T22: 0.1062 REMARK 3 T33: 0.1689 T12: 0.1052 REMARK 3 T13: -0.0376 T23: -0.0082 REMARK 3 L TENSOR REMARK 3 L11: 1.0551 L22: 1.0492 REMARK 3 L33: 1.6178 L12: 0.0889 REMARK 3 L13: -0.3326 L23: 1.2244 REMARK 3 S TENSOR REMARK 3 S11: -0.0887 S12: 0.0044 S13: -0.0276 REMARK 3 S21: 0.2119 S22: 0.0143 S23: 0.0500 REMARK 3 S31: 0.0050 S32: 0.0148 S33: 0.0891 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 801:896) REMARK 3 ORIGIN FOR THE GROUP (A): -23.6101 10.2156 15.4158 REMARK 3 T TENSOR REMARK 3 T11: 0.2318 T22: 0.4612 REMARK 3 T33: 0.2919 T12: 0.0287 REMARK 3 T13: 0.0027 T23: -0.0050 REMARK 3 L TENSOR REMARK 3 L11: 0.5129 L22: 1.7015 REMARK 3 L33: 5.4362 L12: 0.7824 REMARK 3 L13: -0.3630 L23: 0.4649 REMARK 3 S TENSOR REMARK 3 S11: -0.0239 S12: 0.2463 S13: -0.0205 REMARK 3 S21: -0.0453 S22: 0.0847 S23: -0.3902 REMARK 3 S31: -0.1615 S32: 1.2560 S33: -0.0892 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN B AND RESID 1:7) REMARK 3 ORIGIN FOR THE GROUP (A): -34.3547 -4.7492 16.9508 REMARK 3 T TENSOR REMARK 3 T11: 0.1985 T22: 0.2524 REMARK 3 T33: 0.2488 T12: 0.1186 REMARK 3 T13: -0.0025 T23: -0.0898 REMARK 3 L TENSOR REMARK 3 L11: 0.3931 L22: 4.3465 REMARK 3 L33: 3.5530 L12: 1.2446 REMARK 3 L13: 0.3407 L23: 1.5867 REMARK 3 S TENSOR REMARK 3 S11: 0.1668 S12: 0.1132 S13: -0.2633 REMARK 3 S21: -0.0932 S22: 0.5041 S23: -0.7771 REMARK 3 S31: -0.0750 S32: 0.1249 S33: -0.4443 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN B AND RESID 8:13) REMARK 3 ORIGIN FOR THE GROUP (A): -34.9103 -5.5202 26.7492 REMARK 3 T TENSOR REMARK 3 T11: 0.6279 T22: 0.4683 REMARK 3 T33: 0.3310 T12: 0.3923 REMARK 3 T13: -0.0613 T23: 0.0222 REMARK 3 L TENSOR REMARK 3 L11: 5.7992 L22: 7.1927 REMARK 3 L33: 0.5500 L12: -5.6242 REMARK 3 L13: -0.9721 L23: 0.7885 REMARK 3 S TENSOR REMARK 3 S11: -0.7868 S12: -0.5094 S13: -0.5319 REMARK 3 S21: 1.4147 S22: 1.0127 S23: 0.6654 REMARK 3 S31: -0.1586 S32: 0.3616 S33: -0.2969 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3QIS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-JAN-11. REMARK 100 THE DEPOSITION ID IS D_1000063697. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-DEC-09 REMARK 200 TEMPERATURE (KELVIN) : 298 REMARK 200 PH : 6.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20465 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 63.634 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.8 REMARK 200 DATA REDUNDANCY : 10.60 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.1 REMARK 200 DATA REDUNDANCY IN SHELL : 10.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2QV2 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.94 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.56 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.7 M AMMONIUM SULFATE, 0.1 M MES, PH REMARK 280 6.3, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.43133 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 96.86267 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 96.86267 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 48.43133 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1230 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15070 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 536 REMARK 465 VAL A 537 REMARK 465 VAL A 538 REMARK 465 ASP A 539 REMARK 465 GLU A 540 REMARK 465 ARG A 541 REMARK 465 ARG A 542 REMARK 465 TYR A 543 REMARK 465 ARG A 544 REMARK 465 LYS A 545 REMARK 465 VAL A 546 REMARK 465 PHE A 547 REMARK 465 GLU A 548 REMARK 465 ASP A 549 REMARK 465 SER A 550 REMARK 465 VAL A 551 REMARK 465 ARG A 552 REMARK 465 ILE A 553 REMARK 465 MET A 554 REMARK 465 ASP A 555 REMARK 465 ARG A 556 REMARK 465 MET A 557 REMARK 465 GLU A 558 REMARK 465 ASN A 559 REMARK 465 ASP A 560 REMARK 465 PHE A 561 REMARK 465 LEU A 562 REMARK 465 VAL A 697 REMARK 465 PRO A 698 REMARK 465 VAL A 699 REMARK 465 THR A 700 REMARK 465 LYS A 701 REMARK 465 LEU A 702 REMARK 465 ILE A 703 REMARK 465 ASP A 704 REMARK 465 LEU A 705 REMARK 465 GLU A 706 REMARK 465 GLU A 707 REMARK 465 ASP A 708 REMARK 465 SER A 709 REMARK 465 PHE A 710 REMARK 465 LEU A 711 REMARK 465 GLU A 712 REMARK 465 LYS A 713 REMARK 465 GLU A 714 REMARK 465 LYS A 715 REMARK 465 SER A 716 REMARK 465 LEU A 717 REMARK 465 LEU A 718 REMARK 465 GLN A 719 REMARK 465 MET A 720 REMARK 465 VAL A 721 REMARK 465 PRO A 722 REMARK 465 LEU A 723 REMARK 465 ASP A 724 REMARK 465 GLU A 725 REMARK 465 GLY A 726 REMARK 465 ALA A 727 REMARK 465 SER A 728 REMARK 465 GLU A 729 REMARK 465 PRO A 873 REMARK 465 ASN A 874 REMARK 465 LEU A 875 REMARK 465 MET A 876 REMARK 465 ALA A 877 REMARK 465 ARG A 878 REMARK 465 GLN A 879 REMARK 465 THR A 880 REMARK 465 GLY A 897 REMARK 465 SER A 898 REMARK 465 GLU A 899 REMARK 465 GLU A 900 REMARK 465 ASP A 901 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLN A 594 CD OE1 NE2 REMARK 480 LEU A 605 CB CG CD1 CD2 REMARK 480 ASN A 606 CB CG OD1 ND2 REMARK 480 SER A 826 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 107 O HOH A 111 1.91 REMARK 500 O HOH A 56 O HOH A 101 1.98 REMARK 500 O HOH A 72 O HOH A 86 2.03 REMARK 500 NH2 ARG A 830 O HOH A 122 2.04 REMARK 500 O ASP A 662 O HOH A 52 2.05 REMARK 500 N PRO A 563 O HOH A 103 2.11 REMARK 500 NZ LYS A 848 O HOH A 38 2.16 REMARK 500 OE2 GLU B 12 O HOH B 70 2.17 REMARK 500 OE1 GLN A 733 O HOH A 121 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 591 96.96 -69.76 REMARK 500 LEU A 605 103.22 -35.47 REMARK 500 ASN A 606 25.52 89.93 REMARK 500 ARG A 663 63.68 60.92 REMARK 500 CYS A 804 152.14 -42.84 REMARK 500 GLU B 12 14.47 83.36 REMARK 500 REMARK 500 REMARK: NULL DBREF 3QIS A 536 901 UNP Q01968 OCRL_HUMAN 536 901 DBREF 3QIS B 1 13 UNP Q8N4B1 F109A_HUMAN 223 235 SEQRES 1 A 366 LYS VAL VAL ASP GLU ARG ARG TYR ARG LYS VAL PHE GLU SEQRES 2 A 366 ASP SER VAL ARG ILE MET ASP ARG MET GLU ASN ASP PHE SEQRES 3 A 366 LEU PRO SER LEU GLU LEU SER ARG ARG GLU PHE VAL PHE SEQRES 4 A 366 GLU ASN VAL LYS PHE ARG GLN LEU GLN LYS GLU LYS PHE SEQRES 5 A 366 GLN ILE SER ASN ASN GLY GLN VAL PRO CYS HIS PHE SER SEQRES 6 A 366 PHE ILE PRO LYS LEU ASN ASP SER GLN TYR CYS LYS PRO SEQRES 7 A 366 TRP LEU ARG ALA GLU PRO PHE GLU GLY TYR LEU GLU PRO SEQRES 8 A 366 ASN GLU THR VAL ASP ILE SER LEU ASP VAL TYR VAL SER SEQRES 9 A 366 LYS ASP SER VAL THR ILE LEU ASN SER GLY GLU ASP LYS SEQRES 10 A 366 ILE GLU ASP ILE LEU VAL LEU HIS LEU ASP ARG GLY LYS SEQRES 11 A 366 ASP TYR PHE LEU THR ILE SER GLY ASN TYR LEU PRO SER SEQRES 12 A 366 CYS PHE GLY THR SER LEU GLU ALA LEU CYS ARG MET LYS SEQRES 13 A 366 ARG PRO ILE ARG GLU VAL PRO VAL THR LYS LEU ILE ASP SEQRES 14 A 366 LEU GLU GLU ASP SER PHE LEU GLU LYS GLU LYS SER LEU SEQRES 15 A 366 LEU GLN MET VAL PRO LEU ASP GLU GLY ALA SER GLU ARG SEQRES 16 A 366 PRO LEU GLN VAL PRO LYS GLU ILE TRP LEU LEU VAL ASP SEQRES 17 A 366 HIS LEU PHE LYS TYR ALA CYS HIS GLN GLU ASP LEU PHE SEQRES 18 A 366 GLN THR PRO GLY MET GLN GLU GLU LEU GLN GLN ILE ILE SEQRES 19 A 366 ASP CYS LEU ASP THR SER ILE PRO GLU THR ILE PRO GLY SEQRES 20 A 366 SER ASN HIS SER VAL ALA GLU ALA LEU LEU ILE PHE LEU SEQRES 21 A 366 GLU ALA LEU PRO GLU PRO VAL ILE CYS TYR GLU LEU TYR SEQRES 22 A 366 GLN ARG CYS LEU ASP SER ALA TYR ASP PRO ARG ILE CYS SEQRES 23 A 366 ARG GLN VAL ILE SER GLN LEU PRO ARG CYS HIS ARG ASN SEQRES 24 A 366 VAL PHE ARG TYR LEU MET ALA PHE LEU ARG GLU LEU LEU SEQRES 25 A 366 LYS PHE SER GLU TYR ASN SER VAL ASN ALA ASN MET ILE SEQRES 26 A 366 ALA THR LEU PHE THR SER LEU LEU LEU ARG PRO PRO PRO SEQRES 27 A 366 ASN LEU MET ALA ARG GLN THR PRO SER ASP ARG GLN ARG SEQRES 28 A 366 ALA ILE GLN PHE LEU LEU GLY PHE LEU LEU GLY SER GLU SEQRES 29 A 366 GLU ASP SEQRES 1 B 13 PRO PHE ALA ARG LEU HIS GLU CYS TYR GLY GLN GLU ILE FORMUL 3 HOH *123(H2 O) HELIX 1 1 SER A 642 SER A 648 1 7 HELIX 2 2 SER A 683 MET A 690 1 8 HELIX 3 3 PRO A 735 ALA A 749 1 15 HELIX 4 4 MET A 761 SER A 775 1 15 HELIX 5 5 SER A 783 LEU A 798 1 16 HELIX 6 6 CYS A 804 ALA A 815 1 12 HELIX 7 7 ASP A 817 GLN A 827 1 11 HELIX 8 8 PRO A 829 LYS A 848 1 20 HELIX 9 9 PHE A 849 SER A 854 1 6 HELIX 10 10 ASN A 856 LEU A 869 1 14 HELIX 11 11 SER A 882 LEU A 896 1 15 HELIX 12 12 PRO B 1 GLY B 10 1 10 SHEET 1 A 4 LEU A 565 LEU A 567 0 SHEET 2 A 4 GLN A 583 ASN A 591 -1 O SER A 590 N GLU A 566 SHEET 3 A 4 THR A 629 VAL A 636 -1 O ILE A 632 N PHE A 587 SHEET 4 A 4 LEU A 615 GLU A 618 -1 N ARG A 616 O ASP A 635 SHEET 1 B 5 GLU A 571 VAL A 577 0 SHEET 2 B 5 ASP A 666 TYR A 675 1 O ASN A 674 N VAL A 577 SHEET 3 B 5 ASP A 655 LEU A 661 -1 N LEU A 659 O TYR A 667 SHEET 4 B 5 CYS A 597 ILE A 602 -1 N SER A 600 O HIS A 660 SHEET 5 B 5 GLU A 621 LEU A 624 -1 O GLY A 622 N PHE A 599 CISPEP 1 GLU A 618 PRO A 619 0 -2.65 CISPEP 2 PRO A 626 ASN A 627 0 -5.18 CRYST1 73.478 73.478 145.294 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013610 0.007857 0.000000 0.00000 SCALE2 0.000000 0.015715 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006883 0.00000