HEADER TRANSFERASE 29-MAR-10 3MCN TITLE CRYSTAL STRUCTURE OF THE 6-HYROXYMETHYL-7,8-DIHYDROPTERIN TITLE 2 PYROPHOSPHOKINASE DIHYDROPTEROATE SYNTHASE BIFUNCTIONAL ENZYME FROM TITLE 3 FRANCISELLA TULARENSIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: 2-AMINO-4-HYDROXY-6-HYDROXYMETHYLDIHYDROPTERIDINE COMPND 3 PYROPHOSPHOKINASE/DIHYDROPTEROATE SYNTHASE; COMPND 4 CHAIN: A, B; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: FRANCISELLA TULARENSIS SUBSP. HOLARCTICA; SOURCE 3 ORGANISM_TAXID: 376619; SOURCE 4 STRAIN: LVS; SOURCE 5 GENE: FOLP/K, FTL_1265; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28 KEYWDS FOLATE, TIM BARREL, KINASE, SYNTHASE, HPPK, DHPS, PTERIN, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR C.W.PEMBLE IV,P.K.MEHTA,S.MEHRA,Z.LI,R.E.LEE,S.W.WHITE REVDAT 3 08-NOV-17 3MCN 1 REMARK REVDAT 2 12-JAN-11 3MCN 1 JRNL REVDAT 1 22-DEC-10 3MCN 0 JRNL AUTH C.W.PEMBLE,P.K.MEHTA,S.MEHRA,Z.LI,A.NOURSE,R.E.LEE,S.W.WHITE JRNL TITL CRYSTAL STRUCTURE OF THE 6-HYDROXYMETHYL-7,8-DIHYDROPTERIN JRNL TITL 2 PYROPHOSPHOKINASE.DIHYDROPTEROATE SYNTHASE BIFUNCTIONAL JRNL TITL 3 ENZYME FROM FRANCISELLA TULARENSIS. JRNL REF PLOS ONE V. 5 14165 2010 JRNL REFN ESSN 1932-6203 JRNL PMID 21152407 JRNL DOI 10.1371/JOURNAL.PONE.0014165 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.5_2 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.09 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.970 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.4 REMARK 3 NUMBER OF REFLECTIONS : 43519 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.223 REMARK 3 R VALUE (WORKING SET) : 0.220 REMARK 3 FREE R VALUE : 0.280 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 2194 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.0970 - 4.7380 0.99 4439 230 0.2130 0.2580 REMARK 3 2 4.7380 - 3.7610 0.99 4455 226 0.1930 0.2550 REMARK 3 3 3.7610 - 3.2860 0.99 4393 228 0.2070 0.2730 REMARK 3 4 3.2860 - 2.9860 0.99 4387 266 0.2220 0.2710 REMARK 3 5 2.9860 - 2.7720 0.98 4365 225 0.2280 0.3040 REMARK 3 6 2.7720 - 2.6080 0.98 4410 228 0.2370 0.3020 REMARK 3 7 2.6080 - 2.4780 0.94 4226 222 0.2450 0.3150 REMARK 3 8 2.4780 - 2.3700 0.87 3878 210 0.2460 0.3270 REMARK 3 9 2.3700 - 2.2790 0.81 3613 186 0.2400 0.3140 REMARK 3 10 2.2790 - 2.2000 0.70 3159 173 0.2900 0.3640 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.37 REMARK 3 B_SOL : 48.92 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.370 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.25900 REMARK 3 B22 (A**2) : -1.25900 REMARK 3 B33 (A**2) : 2.51800 REMARK 3 B12 (A**2) : 0.45200 REMARK 3 B13 (A**2) : -0.17800 REMARK 3 B23 (A**2) : 1.03500 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 6077 REMARK 3 ANGLE : 1.134 8173 REMARK 3 CHIRALITY : 0.076 960 REMARK 3 PLANARITY : 0.004 1022 REMARK 3 DIHEDRAL : 19.018 2310 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3MCN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-APR-10. REMARK 100 THE DEPOSITION ID IS D_1000058383. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-DEC-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43569 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 46.100 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.3 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.11000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 76.4 REMARK 200 DATA REDUNDANCY IN SHELL : 2.80 REMARK 200 R MERGE FOR SHELL (I) : 0.33000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRIES 2QX0, 1TWW REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.96 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.36 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: TRIS, NA ACETATE, PEG 4000, GLYEROL, REMARK 280 PH 8.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 VAL A 46 REMARK 465 LEU A 47 REMARK 465 LYS A 48 REMARK 465 GLU A 49 REMARK 465 ASP A 50 REMARK 465 ALA A 51 REMARK 465 PRO A 52 REMARK 465 LYS A 53 REMARK 465 GLU A 54 REMARK 465 TRP A 55 REMARK 465 ASP A 89 REMARK 465 LEU A 90 REMARK 465 ASN A 91 REMARK 465 ALA A 92 REMARK 465 PRO A 93 REMARK 465 ALA A 94 REMARK 465 TRP A 95 REMARK 465 SER A 96 REMARK 465 THR A 216 REMARK 465 LYS A 217 REMARK 465 PRO A 218 REMARK 465 ASP A 219 REMARK 465 LEU A 304 REMARK 465 GLY A 305 REMARK 465 ILE A 306 REMARK 465 THR A 307 REMARK 465 ASP A 308 REMARK 465 ARG A 309 REMARK 465 ASN A 310 REMARK 465 GLN A 311 REMARK 465 TYR A 312 REMARK 465 LEU A 313 REMARK 465 ASP A 314 REMARK 465 LYS A 315 REMARK 465 GLU A 316 REMARK 465 ASN A 317 REMARK 465 ALA A 318 REMARK 465 ILE A 319 REMARK 465 ASP A 320 REMARK 465 ASN A 321 REMARK 465 VAL A 322 REMARK 465 CYS A 323 REMARK 465 ASP A 324 REMARK 465 PHE A 351 REMARK 465 GLY A 352 REMARK 465 LYS A 353 REMARK 465 LYS A 354 REMARK 465 SER A 355 REMARK 465 ASP A 356 REMARK 465 THR A 357 REMARK 465 ALA A 358 REMARK 465 ARG A 359 REMARK 465 TYR A 360 REMARK 465 LEU A 361 REMARK 465 LEU A 362 REMARK 465 GLU A 363 REMARK 465 ASN A 364 REMARK 465 ILE A 365 REMARK 465 ILE A 366 REMARK 465 GLU A 367 REMARK 465 ILE A 368 REMARK 465 LYS A 369 REMARK 465 ARG A 370 REMARK 465 ARG A 371 REMARK 465 LEU A 372 REMARK 465 GLU A 373 REMARK 465 THR A 390 REMARK 465 MET B -19 REMARK 465 GLY B -18 REMARK 465 SER B -17 REMARK 465 SER B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 SER B -9 REMARK 465 SER B -8 REMARK 465 GLY B -7 REMARK 465 LEU B -6 REMARK 465 VAL B -5 REMARK 465 PRO B -4 REMARK 465 ARG B -3 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 VAL B 46 REMARK 465 LEU B 47 REMARK 465 LYS B 48 REMARK 465 GLU B 49 REMARK 465 ASP B 50 REMARK 465 ALA B 51 REMARK 465 PRO B 52 REMARK 465 LYS B 53 REMARK 465 GLU B 54 REMARK 465 TRP B 55 REMARK 465 ASP B 56 REMARK 465 ASP B 89 REMARK 465 LEU B 90 REMARK 465 ASN B 91 REMARK 465 ALA B 92 REMARK 465 PRO B 93 REMARK 465 ALA B 94 REMARK 465 TRP B 95 REMARK 465 SER B 96 REMARK 465 LYS B 221 REMARK 465 LEU B 304 REMARK 465 GLY B 305 REMARK 465 ILE B 306 REMARK 465 THR B 307 REMARK 465 ASP B 308 REMARK 465 ARG B 309 REMARK 465 ASN B 310 REMARK 465 GLN B 311 REMARK 465 TYR B 312 REMARK 465 LEU B 313 REMARK 465 ASP B 314 REMARK 465 LYS B 315 REMARK 465 GLU B 316 REMARK 465 ASN B 317 REMARK 465 ALA B 318 REMARK 465 LYS B 354 REMARK 465 THR B 390 REMARK 465 LYS B 391 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 108 -123.96 54.34 REMARK 500 GLU A 160 109.29 -29.87 REMARK 500 SER A 180 -177.87 -67.22 REMARK 500 SER A 185 14.86 -148.52 REMARK 500 PRO A 222 159.35 -48.05 REMARK 500 ILE A 284 -33.92 -39.25 REMARK 500 HIS A 336 3.88 -67.45 REMARK 500 PHE A 349 83.73 -67.48 REMARK 500 LEU A 412 -176.13 -69.72 REMARK 500 ILE A 414 117.14 -37.83 REMARK 500 GLU B 108 -115.64 52.74 REMARK 500 GLU B 160 151.64 -45.83 REMARK 500 SER B 185 21.96 -156.52 REMARK 500 CYS B 281 -22.48 -146.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 426 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 103 OD1 REMARK 620 2 ASP B 101 OD1 108.3 REMARK 620 3 LEU B 102 O 62.4 101.8 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 425 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 B57 B 424 O9 REMARK 620 2 ASP B 101 O 92.8 REMARK 620 3 ASP B 103 OD2 87.4 114.9 REMARK 620 4 HOH B 460 O 103.9 152.4 88.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 423 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 101 OD1 REMARK 620 2 ASP A 103 OD1 103.4 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 423 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE B57 B 423 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE B57 B 424 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 425 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 426 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3MCM RELATED DB: PDB REMARK 900 RELATED ID: 3MCO RELATED DB: PDB DBREF 3MCN A 3 422 UNP Q2A2W3 Q2A2W3_FRATH 2 421 DBREF 3MCN B 3 422 UNP Q2A2W3 Q2A2W3_FRATH 2 421 SEQADV 3MCN MET A -19 UNP Q2A2W3 EXPRESSION TAG SEQADV 3MCN GLY A -18 UNP Q2A2W3 EXPRESSION TAG SEQADV 3MCN SER A -17 UNP Q2A2W3 EXPRESSION TAG SEQADV 3MCN SER A -16 UNP Q2A2W3 EXPRESSION TAG SEQADV 3MCN HIS A -15 UNP Q2A2W3 EXPRESSION TAG SEQADV 3MCN HIS A -14 UNP Q2A2W3 EXPRESSION TAG SEQADV 3MCN HIS A -13 UNP Q2A2W3 EXPRESSION TAG SEQADV 3MCN HIS A -12 UNP Q2A2W3 EXPRESSION TAG SEQADV 3MCN HIS A -11 UNP Q2A2W3 EXPRESSION TAG SEQADV 3MCN HIS A -10 UNP Q2A2W3 EXPRESSION TAG SEQADV 3MCN SER A -9 UNP Q2A2W3 EXPRESSION TAG SEQADV 3MCN SER A -8 UNP Q2A2W3 EXPRESSION TAG SEQADV 3MCN GLY A -7 UNP Q2A2W3 EXPRESSION TAG SEQADV 3MCN LEU A -6 UNP Q2A2W3 EXPRESSION TAG SEQADV 3MCN VAL A -5 UNP Q2A2W3 EXPRESSION TAG SEQADV 3MCN PRO A -4 UNP Q2A2W3 EXPRESSION TAG SEQADV 3MCN ARG A -3 UNP Q2A2W3 EXPRESSION TAG SEQADV 3MCN GLY A -2 UNP Q2A2W3 EXPRESSION TAG SEQADV 3MCN SER A -1 UNP Q2A2W3 EXPRESSION TAG SEQADV 3MCN HIS A 0 UNP Q2A2W3 EXPRESSION TAG SEQADV 3MCN MET A 1 UNP Q2A2W3 EXPRESSION TAG SEQADV 3MCN VAL A 2 UNP Q2A2W3 EXPRESSION TAG SEQADV 3MCN MET B -19 UNP Q2A2W3 EXPRESSION TAG SEQADV 3MCN GLY B -18 UNP Q2A2W3 EXPRESSION TAG SEQADV 3MCN SER B -17 UNP Q2A2W3 EXPRESSION TAG SEQADV 3MCN SER B -16 UNP Q2A2W3 EXPRESSION TAG SEQADV 3MCN HIS B -15 UNP Q2A2W3 EXPRESSION TAG SEQADV 3MCN HIS B -14 UNP Q2A2W3 EXPRESSION TAG SEQADV 3MCN HIS B -13 UNP Q2A2W3 EXPRESSION TAG SEQADV 3MCN HIS B -12 UNP Q2A2W3 EXPRESSION TAG SEQADV 3MCN HIS B -11 UNP Q2A2W3 EXPRESSION TAG SEQADV 3MCN HIS B -10 UNP Q2A2W3 EXPRESSION TAG SEQADV 3MCN SER B -9 UNP Q2A2W3 EXPRESSION TAG SEQADV 3MCN SER B -8 UNP Q2A2W3 EXPRESSION TAG SEQADV 3MCN GLY B -7 UNP Q2A2W3 EXPRESSION TAG SEQADV 3MCN LEU B -6 UNP Q2A2W3 EXPRESSION TAG SEQADV 3MCN VAL B -5 UNP Q2A2W3 EXPRESSION TAG SEQADV 3MCN PRO B -4 UNP Q2A2W3 EXPRESSION TAG SEQADV 3MCN ARG B -3 UNP Q2A2W3 EXPRESSION TAG SEQADV 3MCN GLY B -2 UNP Q2A2W3 EXPRESSION TAG SEQADV 3MCN SER B -1 UNP Q2A2W3 EXPRESSION TAG SEQADV 3MCN HIS B 0 UNP Q2A2W3 EXPRESSION TAG SEQADV 3MCN MET B 1 UNP Q2A2W3 EXPRESSION TAG SEQADV 3MCN VAL B 2 UNP Q2A2W3 EXPRESSION TAG SEQRES 1 A 442 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 442 LEU VAL PRO ARG GLY SER HIS MET VAL GLN TYR ILE ILE SEQRES 3 A 442 GLY ILE GLY THR ASN SER GLY PHE THR ILE GLU ASN ILE SEQRES 4 A 442 HIS LEU ALA ILE THR ALA LEU GLU SER GLN GLN ASN ILE SEQRES 5 A 442 ARG ILE ILE ARG LYS ALA SER LEU TYR SER SER LYS ALA SEQRES 6 A 442 VAL LEU LYS GLU ASP ALA PRO LYS GLU TRP ASP ILE ARG SEQRES 7 A 442 PHE LEU ASN THR ALA VAL LYS ILE SER SER SER LEU LYS SEQRES 8 A 442 PRO ASP GLU LEU LEU VAL LEU LEU LYS ASP ILE GLU LEU SEQRES 9 A 442 LYS ILE GLY ARG ASP LEU ASN ALA PRO ALA TRP SER PRO SEQRES 10 A 442 ARG VAL ILE ASP LEU ASP ILE LEU ALA ALA GLU ASP LEU SEQRES 11 A 442 ILE LEU GLU THR ASP LYS LEU THR ILE PRO HIS LYS GLU SEQRES 12 A 442 LEU ILE ASN ARG SER PHE ALA LEU ALA PRO LEU LEU GLU SEQRES 13 A 442 LEU SER LYS GLY TRP HIS HIS PRO LYS TYR VAL GLU TRP SEQRES 14 A 442 ASP LEU ASN ILE ARG LEU LYS GLU LEU GLY GLU ILE VAL SEQRES 15 A 442 LYS LEU LYS GLN THR LEU ALA ASN THR ILE ARG MET GLY SEQRES 16 A 442 ILE VAL ASN LEU SER ASN GLN SER PHE SER ASP GLY ASN SEQRES 17 A 442 PHE ASP ASP ASN GLN ARG LYS LEU ASN LEU ASP GLU LEU SEQRES 18 A 442 ILE GLN SER GLY ALA GLU ILE ILE ASP ILE GLY ALA GLU SEQRES 19 A 442 SER THR LYS PRO ASP ALA LYS PRO ILE SER ILE GLU GLU SEQRES 20 A 442 GLU PHE ASN LYS LEU ASN GLU PHE LEU GLU TYR PHE LYS SEQRES 21 A 442 SER GLN LEU ALA ASN LEU ILE TYR LYS PRO LEU VAL SER SEQRES 22 A 442 ILE ASP THR ARG LYS LEU GLU VAL MET GLN LYS ILE LEU SEQRES 23 A 442 ALA LYS HIS HIS ASP ILE ILE TRP MET ILE ASN ASP VAL SEQRES 24 A 442 GLU CYS ASN ASN ILE GLU GLN LYS ALA GLN LEU ILE ALA SEQRES 25 A 442 LYS TYR ASN LYS LYS TYR VAL ILE ILE HIS ASN LEU GLY SEQRES 26 A 442 ILE THR ASP ARG ASN GLN TYR LEU ASP LYS GLU ASN ALA SEQRES 27 A 442 ILE ASP ASN VAL CYS ASP TYR ILE GLU GLN LYS LYS GLN SEQRES 28 A 442 ILE LEU LEU LYS HIS GLY ILE ALA GLN GLN ASN ILE TYR SEQRES 29 A 442 PHE ASP ILE GLY PHE GLY PHE GLY LYS LYS SER ASP THR SEQRES 30 A 442 ALA ARG TYR LEU LEU GLU ASN ILE ILE GLU ILE LYS ARG SEQRES 31 A 442 ARG LEU GLU LEU LYS ALA LEU VAL GLY HIS SER ARG LYS SEQRES 32 A 442 PRO SER VAL LEU GLY LEU THR LYS ASP SER ASN LEU ALA SEQRES 33 A 442 THR LEU ASP ARG ALA THR ARG GLU LEU SER ARG LYS LEU SEQRES 34 A 442 GLU LYS LEU ASP ILE ASP ILE ILE ARG VAL HIS LYS ILE SEQRES 1 B 442 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 442 LEU VAL PRO ARG GLY SER HIS MET VAL GLN TYR ILE ILE SEQRES 3 B 442 GLY ILE GLY THR ASN SER GLY PHE THR ILE GLU ASN ILE SEQRES 4 B 442 HIS LEU ALA ILE THR ALA LEU GLU SER GLN GLN ASN ILE SEQRES 5 B 442 ARG ILE ILE ARG LYS ALA SER LEU TYR SER SER LYS ALA SEQRES 6 B 442 VAL LEU LYS GLU ASP ALA PRO LYS GLU TRP ASP ILE ARG SEQRES 7 B 442 PHE LEU ASN THR ALA VAL LYS ILE SER SER SER LEU LYS SEQRES 8 B 442 PRO ASP GLU LEU LEU VAL LEU LEU LYS ASP ILE GLU LEU SEQRES 9 B 442 LYS ILE GLY ARG ASP LEU ASN ALA PRO ALA TRP SER PRO SEQRES 10 B 442 ARG VAL ILE ASP LEU ASP ILE LEU ALA ALA GLU ASP LEU SEQRES 11 B 442 ILE LEU GLU THR ASP LYS LEU THR ILE PRO HIS LYS GLU SEQRES 12 B 442 LEU ILE ASN ARG SER PHE ALA LEU ALA PRO LEU LEU GLU SEQRES 13 B 442 LEU SER LYS GLY TRP HIS HIS PRO LYS TYR VAL GLU TRP SEQRES 14 B 442 ASP LEU ASN ILE ARG LEU LYS GLU LEU GLY GLU ILE VAL SEQRES 15 B 442 LYS LEU LYS GLN THR LEU ALA ASN THR ILE ARG MET GLY SEQRES 16 B 442 ILE VAL ASN LEU SER ASN GLN SER PHE SER ASP GLY ASN SEQRES 17 B 442 PHE ASP ASP ASN GLN ARG LYS LEU ASN LEU ASP GLU LEU SEQRES 18 B 442 ILE GLN SER GLY ALA GLU ILE ILE ASP ILE GLY ALA GLU SEQRES 19 B 442 SER THR LYS PRO ASP ALA LYS PRO ILE SER ILE GLU GLU SEQRES 20 B 442 GLU PHE ASN LYS LEU ASN GLU PHE LEU GLU TYR PHE LYS SEQRES 21 B 442 SER GLN LEU ALA ASN LEU ILE TYR LYS PRO LEU VAL SER SEQRES 22 B 442 ILE ASP THR ARG LYS LEU GLU VAL MET GLN LYS ILE LEU SEQRES 23 B 442 ALA LYS HIS HIS ASP ILE ILE TRP MET ILE ASN ASP VAL SEQRES 24 B 442 GLU CYS ASN ASN ILE GLU GLN LYS ALA GLN LEU ILE ALA SEQRES 25 B 442 LYS TYR ASN LYS LYS TYR VAL ILE ILE HIS ASN LEU GLY SEQRES 26 B 442 ILE THR ASP ARG ASN GLN TYR LEU ASP LYS GLU ASN ALA SEQRES 27 B 442 ILE ASP ASN VAL CYS ASP TYR ILE GLU GLN LYS LYS GLN SEQRES 28 B 442 ILE LEU LEU LYS HIS GLY ILE ALA GLN GLN ASN ILE TYR SEQRES 29 B 442 PHE ASP ILE GLY PHE GLY PHE GLY LYS LYS SER ASP THR SEQRES 30 B 442 ALA ARG TYR LEU LEU GLU ASN ILE ILE GLU ILE LYS ARG SEQRES 31 B 442 ARG LEU GLU LEU LYS ALA LEU VAL GLY HIS SER ARG LYS SEQRES 32 B 442 PRO SER VAL LEU GLY LEU THR LYS ASP SER ASN LEU ALA SEQRES 33 B 442 THR LEU ASP ARG ALA THR ARG GLU LEU SER ARG LYS LEU SEQRES 34 B 442 GLU LYS LEU ASP ILE ASP ILE ILE ARG VAL HIS LYS ILE HET MG A 423 1 HET B57 B 423 12 HET B57 B 424 12 HET MG B 425 1 HET MG B 426 1 HETNAM MG MAGNESIUM ION HETNAM B57 2,6-DIAMINO-5-NITROPYRIMIDIN-4(3H)-ONE FORMUL 3 MG 3(MG 2+) FORMUL 4 B57 2(C4 H5 N5 O3) FORMUL 8 HOH *165(H2 O) HELIX 1 1 PHE A 14 SER A 28 1 15 HELIX 2 2 LYS A 71 ILE A 86 1 16 HELIX 3 3 GLU A 123 ASN A 126 5 4 HELIX 4 4 ARG A 127 SER A 138 1 12 HELIX 5 5 ASP A 150 GLY A 159 1 10 HELIX 6 6 ASN A 192 SER A 204 1 13 HELIX 7 7 SER A 224 GLN A 242 1 19 HELIX 8 8 LEU A 243 LEU A 246 5 4 HELIX 9 9 LYS A 258 HIS A 270 1 13 HELIX 10 10 ASP A 271 ILE A 273 5 3 HELIX 11 11 ASN A 283 ASN A 295 1 13 HELIX 12 12 TYR A 325 GLY A 337 1 13 HELIX 13 13 ALA A 339 GLN A 341 5 3 HELIX 14 14 LYS A 383 GLY A 388 1 6 HELIX 15 15 ASN A 394 LEU A 412 1 19 HELIX 16 16 PHE B 14 GLN B 29 1 16 HELIX 17 17 LYS B 71 ILE B 86 1 16 HELIX 18 18 GLU B 123 ASN B 126 5 4 HELIX 19 19 ARG B 127 SER B 138 1 12 HELIX 20 20 ASP B 150 LEU B 158 1 9 HELIX 21 21 SER B 180 PHE B 184 5 5 HELIX 22 22 ASN B 192 SER B 204 1 13 HELIX 23 23 SER B 224 GLN B 242 1 19 HELIX 24 24 LEU B 243 LEU B 246 5 4 HELIX 25 25 LYS B 258 HIS B 270 1 13 HELIX 26 26 ASP B 271 ILE B 273 5 3 HELIX 27 27 ASN B 283 ASN B 295 1 13 HELIX 28 28 ILE B 319 HIS B 336 1 18 HELIX 29 29 ALA B 339 GLN B 341 5 3 HELIX 30 30 SER B 355 GLU B 363 1 9 HELIX 31 31 ASN B 364 GLU B 373 1 10 HELIX 32 32 LYS B 383 GLY B 388 1 6 HELIX 33 33 ASN B 394 ASP B 413 1 20 SHEET 1 A 4 ILE A 32 LYS A 37 0 SHEET 2 A 4 PHE A 59 SER A 68 -1 O LYS A 65 N ARG A 36 SHEET 3 A 4 VAL A 2 THR A 10 -1 N ILE A 6 O VAL A 64 SHEET 4 A 4 ASP A 101 ALA A 106 -1 O ASP A 103 N GLY A 7 SHEET 1 B 4 ILE A 32 LYS A 37 0 SHEET 2 B 4 PHE A 59 SER A 68 -1 O LYS A 65 N ARG A 36 SHEET 3 B 4 TYR A 41 SER A 43 -1 N SER A 43 O PHE A 59 SHEET 4 B 4 VAL A 162 LYS A 163 -1 O VAL A 162 N SER A 42 SHEET 1 C 2 LEU A 112 GLU A 113 0 SHEET 2 C 2 THR A 118 ILE A 119 -1 O ILE A 119 N LEU A 112 SHEET 1 D 9 ILE A 172 ASN A 178 0 SHEET 2 D 9 ILE A 208 GLY A 212 1 O ASP A 210 N GLY A 175 SHEET 3 D 9 LEU A 251 ASP A 255 1 O SER A 253 N ILE A 209 SHEET 4 D 9 MET A 275 ASN A 277 1 O ASN A 277 N ILE A 254 SHEET 5 D 9 LYS A 297 ILE A 300 1 O LYS A 297 N ILE A 276 SHEET 6 D 9 ILE A 343 PHE A 345 1 O TYR A 344 N TYR A 298 SHEET 7 D 9 LYS A 375 GLY A 379 1 O LEU A 377 N PHE A 345 SHEET 8 D 9 ILE A 416 VAL A 419 1 O ILE A 416 N VAL A 378 SHEET 9 D 9 ILE A 172 ASN A 178 1 N MET A 174 O VAL A 419 SHEET 1 E 4 ILE B 32 LYS B 37 0 SHEET 2 E 4 PHE B 59 SER B 68 -1 O LYS B 65 N ARG B 36 SHEET 3 E 4 VAL B 2 THR B 10 -1 N THR B 10 O LEU B 60 SHEET 4 E 4 ILE B 100 ALA B 106 -1 O ASP B 103 N GLY B 7 SHEET 1 F 4 ILE B 32 LYS B 37 0 SHEET 2 F 4 PHE B 59 SER B 68 -1 O LYS B 65 N ARG B 36 SHEET 3 F 4 TYR B 41 SER B 43 -1 N SER B 43 O PHE B 59 SHEET 4 F 4 VAL B 162 LYS B 163 -1 O VAL B 162 N SER B 42 SHEET 1 G 2 LEU B 112 GLU B 113 0 SHEET 2 G 2 THR B 118 ILE B 119 -1 O ILE B 119 N LEU B 112 SHEET 1 H 9 ILE B 172 ASN B 178 0 SHEET 2 H 9 ILE B 208 GLY B 212 1 O ASP B 210 N VAL B 177 SHEET 3 H 9 LEU B 251 ASP B 255 1 O ASP B 255 N ILE B 211 SHEET 4 H 9 MET B 275 ASP B 278 1 O ASN B 277 N ILE B 254 SHEET 5 H 9 LYS B 297 ILE B 301 1 O LYS B 297 N ILE B 276 SHEET 6 H 9 ILE B 343 ASP B 346 1 O TYR B 344 N ILE B 300 SHEET 7 H 9 LYS B 375 VAL B 378 1 O LEU B 377 N PHE B 345 SHEET 8 H 9 ILE B 416 VAL B 419 1 O ILE B 416 N VAL B 378 SHEET 9 H 9 ILE B 172 ASN B 178 1 N MET B 174 O ILE B 417 LINK OD1 ASP B 103 MG MG B 426 1555 1555 2.57 LINK O9 B57 B 424 MG MG B 425 1555 1555 2.57 LINK OD1 ASP A 101 MG MG A 423 1555 1555 2.65 LINK OD1 ASP A 103 MG MG A 423 1555 1555 2.81 LINK OD1BASP B 101 MG MG B 426 1555 1555 2.82 LINK O ASP B 101 MG MG B 425 1555 1555 2.83 LINK O LEU B 102 MG MG B 426 1555 1555 2.95 LINK OD2 ASP B 103 MG MG B 425 1555 1555 2.99 LINK MG MG B 425 O HOH B 460 1555 1555 2.96 CISPEP 1 ILE A 119 PRO A 120 0 1.50 CISPEP 2 HIS A 302 ASN A 303 0 9.23 CISPEP 3 ILE B 119 PRO B 120 0 -2.76 SITE 1 AC1 2 ASP A 101 ASP A 103 SITE 1 AC2 6 ASP B 255 ASN B 277 ILE B 301 ASP B 346 SITE 2 AC2 6 LYS B 383 ARG B 418 SITE 1 AC3 7 GLY B 9 PHE B 59 ASN B 61 ASP B 101 SITE 2 AC3 7 PHE B 129 MG B 425 HOH B 496 SITE 1 AC4 5 GLY B 7 ASP B 101 ASP B 103 B57 B 424 SITE 2 AC4 5 HOH B 460 SITE 1 AC5 4 GLU B 83 ASP B 101 LEU B 102 ASP B 103 CRYST1 42.902 58.190 105.077 91.00 80.11 68.29 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023309 -0.009282 -0.004905 0.00000 SCALE2 0.000000 0.018498 0.001644 0.00000 SCALE3 0.000000 0.000000 0.009699 0.00000