HEADER UNKNOWN FUNCTION 16-MAY-07 2PYQ TITLE CRYSTAL STRUCTURE OF A DUF2853 MEMBER PROTEIN (JANN_4075) FROM TITLE 2 JANNASCHIA SP. CCS1 AT 1.500 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: JANNASCHIA SP. CCS1; SOURCE 3 ORGANISM_TAXID: 290400; SOURCE 4 GENE: YP_512017.1, JANN_4075; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: HK100; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, KEYWDS 2 PROTEIN STRUCTURE INITIATIVE, PSI-2, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 5 25-JAN-23 2PYQ 1 REMARK SEQADV LINK REVDAT 4 18-OCT-17 2PYQ 1 REMARK REVDAT 3 23-MAR-11 2PYQ 1 HEADER TITLE KEYWDS REVDAT 2 24-FEB-09 2PYQ 1 VERSN REVDAT 1 29-MAY-07 2PYQ 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF UNCHARACTERIZED PROTEIN (YP_512017.1) JRNL TITL 2 FROM JANNASCHIA SP. CCS1 AT 1.500 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : TWIN_LSQ_F REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.69 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 59537 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.195 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.400 REMARK 3 FREE R VALUE TEST SET COUNT : 6264 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 K_SOL : 0.40 REMARK 3 B_SOL : 51.30 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.52 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.35 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.29000 REMARK 3 B22 (A**2) : -3.60500 REMARK 3 B33 (A**2) : 1.31500 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 1.27800 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.013 NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : 9.388 NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): 4.8449 31.5810 30.9323 REMARK 3 T TENSOR REMARK 3 T11: 0.2864 T22: 0.2042 REMARK 3 T33: 0.1975 T12: 0.0163 REMARK 3 T13: -0.0071 T23: -0.0228 REMARK 3 L TENSOR REMARK 3 L11: 1.4326 L22: 1.9777 REMARK 3 L33: 1.3667 L12: 0.2800 REMARK 3 L13: -0.3588 L23: -0.5341 REMARK 3 S TENSOR REMARK 3 S11: 0.0512 S12: -0.0231 S13: -0.1921 REMARK 3 S21: 0.2227 S22: -0.0419 S23: -0.0591 REMARK 3 S31: 0.1237 S32: 0.0352 S33: -0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B REMARK 3 ORIGIN FOR THE GROUP (A): 21.3840 32.2419 56.7451 REMARK 3 T TENSOR REMARK 3 T11: 0.2359 T22: 0.1878 REMARK 3 T33: 0.1886 T12: -0.0140 REMARK 3 T13: -0.0110 T23: -0.0236 REMARK 3 L TENSOR REMARK 3 L11: 1.5328 L22: 1.8790 REMARK 3 L33: 1.4306 L12: -0.3866 REMARK 3 L13: 0.2547 L23: -0.1713 REMARK 3 S TENSOR REMARK 3 S11: 0.0335 S12: 0.0156 S13: 0.1434 REMARK 3 S21: -0.2359 S22: -0.0035 S23: -0.0133 REMARK 3 S31: -0.0978 S32: 0.0239 S33: 0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN C REMARK 3 ORIGIN FOR THE GROUP (A): -2.9224 57.6950 45.3009 REMARK 3 T TENSOR REMARK 3 T11: 0.1428 T22: 0.1756 REMARK 3 T33: 0.1773 T12: 0.0041 REMARK 3 T13: -0.0006 T23: 0.0090 REMARK 3 L TENSOR REMARK 3 L11: 2.2414 L22: 2.2992 REMARK 3 L33: 1.4127 L12: 0.1241 REMARK 3 L13: -0.1596 L23: 0.0526 REMARK 3 S TENSOR REMARK 3 S11: 0.0503 S12: 0.0144 S13: -0.0447 REMARK 3 S21: 0.0184 S22: -0.0823 S23: -0.0533 REMARK 3 S31: 0.1549 S32: -0.0505 S33: -0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN D REMARK 3 ORIGIN FOR THE GROUP (A): 18.8185 55.5835 74.4227 REMARK 3 T TENSOR REMARK 3 T11: 0.1449 T22: 0.1779 REMARK 3 T33: 0.1771 T12: 0.0115 REMARK 3 T13: -0.0180 T23: -0.0053 REMARK 3 L TENSOR REMARK 3 L11: 1.7938 L22: 2.3925 REMARK 3 L33: 1.4842 L12: 0.5403 REMARK 3 L13: 0.3296 L23: 0.1978 REMARK 3 S TENSOR REMARK 3 S11: 0.0462 S12: 0.0484 S13: 0.0756 REMARK 3 S21: 0.0117 S22: -0.0536 S23: -0.0129 REMARK 3 S31: -0.0942 S32: 0.0356 S33: -0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. REMARK 3 2. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE REMARK 3 INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY REMARK 3 OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 REMARK 3 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. REMARK 3 3. PEG 200 MOLECULES (PG4) ARE MODELED. REMARK 3 4. THE DATA ARE TWINNED WITH THE TWIN LAW -H,-K,L. THE REFINED TWIN REMARK 3 FRACTION WAS 0.227. REMARK 3 5. DUE TO 4-FOLD NCS AND TWINNING, REFLECTIONS FOR R-FREE SET WERE REMARK 3 SELECTED IN THIN SHELLS. REMARK 3 6. WHEN REFINING TLS, THE OUTPUT PDB FILE ALWAYS HAS THE ANISOU REMARK 3 RECORDS REMARK 3 FOR THE ATOMS INVOLVED IN TLS GROUPS. THE ANISOTROPIC B-FACTOR IN REMARK 3 ANISOU REMARK 3 RECORDS IS THE TOTAL B-FACTOR (B_TLS + B_INDIVIDUAL). THE ISOTROPIC REMARK 3 EQUIVALENT B-FACTOR IN ATOM RECORDS IS THE MEAN OF THE TRACE OF THE REMARK 3 ANISOU MATRIX DIVIDED BY 10000 AND MULTIPLIED BY 8*PI^2 AND REMARK 3 REPRESENTS REMARK 3 THE ISOTROPIC EQUIVALENT OF THE TOTAL B-FACTOR (B_TLS + B_ REMARK 3 INDIVIDUAL). REMARK 3 TO OBTAIN THE INDIVIDUAL B-FACTORS, ONE NEEDS TO COMPUTE THE TLS REMARK 3 COMPONENT (B_TLS) USING THE TLS RECORDS IN THE PDB FILE HEADER AND REMARK 3 THEN REMARK 3 SUBTRACT IT FROM THE TOTAL B-FACTORS (ON THE ANISOU RECORDS). REMARK 4 REMARK 4 2PYQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-MAY-07. REMARK 100 THE DEPOSITION ID IS D_1000042932. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-APR-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91837, 0.97910, 0.97886 REMARK 200 MONOCHROMATOR : SINGLE CRYSTAL SI(111) BENT REMARK 200 (HORIZONTAL FOCUSING) REMARK 200 OPTICS : FLAT MIRROR (VERTICAL FOCUSING) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 59568 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 28.689 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.05200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.7700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.55 REMARK 200 COMPLETENESS FOR SHELL (%) : 88.7 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.46800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX, AUTOSHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 33.15 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.84 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NANODROP, 30.0% PEG 6000, 0.1M HEPES REMARK 280 PH 7.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 49.35500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 4 CD NE CZ NH1 NH2 REMARK 470 GLU A 22 CG CD OE1 OE2 REMARK 470 ARG A 42 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 65 CG CD CE NZ REMARK 470 LYS A 66 NZ REMARK 470 GLU A 73 CD OE1 OE2 REMARK 470 GLU A 84 CD OE1 OE2 REMARK 470 ARG A 88 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 4 NE CZ NH1 NH2 REMARK 470 GLU B 22 CG CD OE1 OE2 REMARK 470 GLU B 29 CD OE1 OE2 REMARK 470 ARG B 42 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 60 CG CD CE NZ REMARK 470 LYS B 65 CE NZ REMARK 470 LYS B 66 CE NZ REMARK 470 GLU B 84 CD OE1 OE2 REMARK 470 ARG B 88 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 108 NZ REMARK 470 ARG C 4 CZ NH1 NH2 REMARK 470 GLU C 22 CG CD OE1 OE2 REMARK 470 LYS C 65 CD CE NZ REMARK 470 GLU C 73 CG CD OE1 OE2 REMARK 470 ARG C 91 CD NE CZ NH1 NH2 REMARK 470 ARG D 4 NE CZ NH1 NH2 REMARK 470 LYS D 65 CD CE NZ REMARK 470 GLU D 73 CG CD OE1 OE2 REMARK 470 ARG D 91 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 MSE A 101 SE MSE A 101 CE -0.399 REMARK 500 MSE A 101 SE MSE A 101 CE -0.398 REMARK 500 GLU B 73 CG GLU B 73 CD -0.131 REMARK 500 GLU B 73 CG GLU B 73 CD -0.094 REMARK 500 ILE C 8 N ILE C 8 CA 0.138 REMARK 500 VAL C 82 CA VAL C 82 C 0.156 REMARK 500 ILE D 8 N ILE D 8 CA 0.132 REMARK 500 ILE D 8 N ILE D 8 CA 0.160 REMARK 500 VAL D 82 N VAL D 82 CA -0.122 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 92 70.47 -119.02 REMARK 500 ASN B 92 72.45 -118.29 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PG4 D 114 REMARK 610 PG4 D 115 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 D 114 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 D 115 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 373487 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG REMARK 999 MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV REMARK 999 PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE REMARK 999 TARGET SEQUENCE. DBREF 2PYQ A 1 113 UNP Q28JX0 Q28JX0_JANSC 1 113 DBREF 2PYQ B 1 113 UNP Q28JX0 Q28JX0_JANSC 1 113 DBREF 2PYQ C 1 113 UNP Q28JX0 Q28JX0_JANSC 1 113 DBREF 2PYQ D 1 113 UNP Q28JX0 Q28JX0_JANSC 1 113 SEQADV 2PYQ GLY A 0 UNP Q28JX0 EXPRESSION TAG SEQADV 2PYQ MSE A 1 UNP Q28JX0 MET 1 MODIFIED RESIDUE SEQADV 2PYQ MSE A 21 UNP Q28JX0 MET 21 MODIFIED RESIDUE SEQADV 2PYQ MSE A 25 UNP Q28JX0 MET 25 MODIFIED RESIDUE SEQADV 2PYQ MSE A 64 UNP Q28JX0 MET 64 MODIFIED RESIDUE SEQADV 2PYQ MSE A 76 UNP Q28JX0 MET 76 MODIFIED RESIDUE SEQADV 2PYQ MSE A 101 UNP Q28JX0 MET 101 MODIFIED RESIDUE SEQADV 2PYQ GLY B 0 UNP Q28JX0 EXPRESSION TAG SEQADV 2PYQ MSE B 1 UNP Q28JX0 MET 1 MODIFIED RESIDUE SEQADV 2PYQ MSE B 21 UNP Q28JX0 MET 21 MODIFIED RESIDUE SEQADV 2PYQ MSE B 25 UNP Q28JX0 MET 25 MODIFIED RESIDUE SEQADV 2PYQ MSE B 64 UNP Q28JX0 MET 64 MODIFIED RESIDUE SEQADV 2PYQ MSE B 76 UNP Q28JX0 MET 76 MODIFIED RESIDUE SEQADV 2PYQ MSE B 101 UNP Q28JX0 MET 101 MODIFIED RESIDUE SEQADV 2PYQ GLY C 0 UNP Q28JX0 EXPRESSION TAG SEQADV 2PYQ MSE C 1 UNP Q28JX0 MET 1 MODIFIED RESIDUE SEQADV 2PYQ MSE C 21 UNP Q28JX0 MET 21 MODIFIED RESIDUE SEQADV 2PYQ MSE C 25 UNP Q28JX0 MET 25 MODIFIED RESIDUE SEQADV 2PYQ MSE C 64 UNP Q28JX0 MET 64 MODIFIED RESIDUE SEQADV 2PYQ MSE C 76 UNP Q28JX0 MET 76 MODIFIED RESIDUE SEQADV 2PYQ MSE C 101 UNP Q28JX0 MET 101 MODIFIED RESIDUE SEQADV 2PYQ GLY D 0 UNP Q28JX0 EXPRESSION TAG SEQADV 2PYQ MSE D 1 UNP Q28JX0 MET 1 MODIFIED RESIDUE SEQADV 2PYQ MSE D 21 UNP Q28JX0 MET 21 MODIFIED RESIDUE SEQADV 2PYQ MSE D 25 UNP Q28JX0 MET 25 MODIFIED RESIDUE SEQADV 2PYQ MSE D 64 UNP Q28JX0 MET 64 MODIFIED RESIDUE SEQADV 2PYQ MSE D 76 UNP Q28JX0 MET 76 MODIFIED RESIDUE SEQADV 2PYQ MSE D 101 UNP Q28JX0 MET 101 MODIFIED RESIDUE SEQRES 1 A 114 GLY MSE GLY LYS ARG ASP ASP LEU ILE ALA GLN TYR ALA SEQRES 2 A 114 ASP ASP LEU ARG ASN LYS CYS GLY MSE GLU PRO ASP MSE SEQRES 3 A 114 ALA LEU LEU GLU LYS VAL THR LYS GLY CYS GLY PRO ALA SEQRES 4 A 114 ILE TYR ASN ARG ASP ALA SER THR VAL ALA GLY SER ASP SEQRES 5 A 114 THR ALA GLU LEU GLU THR ILE LYS LYS ASN PHE LEU MSE SEQRES 6 A 114 LYS LYS LEU GLY LEU ALA ASP SER GLU SER LEU MSE GLY SEQRES 7 A 114 GLY ILE GLN SER VAL ILE GLU THR TYR GLY ARG SER GLU SEQRES 8 A 114 ARG ASN LYS TYR ARG ALA VAL VAL TYR TYR MSE LEU THR SEQRES 9 A 114 LYS HIS PHE GLY LYS GLU SER VAL TYR GLY SEQRES 1 B 114 GLY MSE GLY LYS ARG ASP ASP LEU ILE ALA GLN TYR ALA SEQRES 2 B 114 ASP ASP LEU ARG ASN LYS CYS GLY MSE GLU PRO ASP MSE SEQRES 3 B 114 ALA LEU LEU GLU LYS VAL THR LYS GLY CYS GLY PRO ALA SEQRES 4 B 114 ILE TYR ASN ARG ASP ALA SER THR VAL ALA GLY SER ASP SEQRES 5 B 114 THR ALA GLU LEU GLU THR ILE LYS LYS ASN PHE LEU MSE SEQRES 6 B 114 LYS LYS LEU GLY LEU ALA ASP SER GLU SER LEU MSE GLY SEQRES 7 B 114 GLY ILE GLN SER VAL ILE GLU THR TYR GLY ARG SER GLU SEQRES 8 B 114 ARG ASN LYS TYR ARG ALA VAL VAL TYR TYR MSE LEU THR SEQRES 9 B 114 LYS HIS PHE GLY LYS GLU SER VAL TYR GLY SEQRES 1 C 114 GLY MSE GLY LYS ARG ASP ASP LEU ILE ALA GLN TYR ALA SEQRES 2 C 114 ASP ASP LEU ARG ASN LYS CYS GLY MSE GLU PRO ASP MSE SEQRES 3 C 114 ALA LEU LEU GLU LYS VAL THR LYS GLY CYS GLY PRO ALA SEQRES 4 C 114 ILE TYR ASN ARG ASP ALA SER THR VAL ALA GLY SER ASP SEQRES 5 C 114 THR ALA GLU LEU GLU THR ILE LYS LYS ASN PHE LEU MSE SEQRES 6 C 114 LYS LYS LEU GLY LEU ALA ASP SER GLU SER LEU MSE GLY SEQRES 7 C 114 GLY ILE GLN SER VAL ILE GLU THR TYR GLY ARG SER GLU SEQRES 8 C 114 ARG ASN LYS TYR ARG ALA VAL VAL TYR TYR MSE LEU THR SEQRES 9 C 114 LYS HIS PHE GLY LYS GLU SER VAL TYR GLY SEQRES 1 D 114 GLY MSE GLY LYS ARG ASP ASP LEU ILE ALA GLN TYR ALA SEQRES 2 D 114 ASP ASP LEU ARG ASN LYS CYS GLY MSE GLU PRO ASP MSE SEQRES 3 D 114 ALA LEU LEU GLU LYS VAL THR LYS GLY CYS GLY PRO ALA SEQRES 4 D 114 ILE TYR ASN ARG ASP ALA SER THR VAL ALA GLY SER ASP SEQRES 5 D 114 THR ALA GLU LEU GLU THR ILE LYS LYS ASN PHE LEU MSE SEQRES 6 D 114 LYS LYS LEU GLY LEU ALA ASP SER GLU SER LEU MSE GLY SEQRES 7 D 114 GLY ILE GLN SER VAL ILE GLU THR TYR GLY ARG SER GLU SEQRES 8 D 114 ARG ASN LYS TYR ARG ALA VAL VAL TYR TYR MSE LEU THR SEQRES 9 D 114 LYS HIS PHE GLY LYS GLU SER VAL TYR GLY MODRES 2PYQ MSE A 1 MET SELENOMETHIONINE MODRES 2PYQ MSE A 21 MET SELENOMETHIONINE MODRES 2PYQ MSE A 25 MET SELENOMETHIONINE MODRES 2PYQ MSE A 64 MET SELENOMETHIONINE MODRES 2PYQ MSE A 76 MET SELENOMETHIONINE MODRES 2PYQ MSE A 101 MET SELENOMETHIONINE MODRES 2PYQ MSE B 1 MET SELENOMETHIONINE MODRES 2PYQ MSE B 21 MET SELENOMETHIONINE MODRES 2PYQ MSE B 25 MET SELENOMETHIONINE MODRES 2PYQ MSE B 64 MET SELENOMETHIONINE MODRES 2PYQ MSE B 76 MET SELENOMETHIONINE MODRES 2PYQ MSE B 101 MET SELENOMETHIONINE MODRES 2PYQ MSE C 1 MET SELENOMETHIONINE MODRES 2PYQ MSE C 21 MET SELENOMETHIONINE MODRES 2PYQ MSE C 25 MET SELENOMETHIONINE MODRES 2PYQ MSE C 64 MET SELENOMETHIONINE MODRES 2PYQ MSE C 76 MET SELENOMETHIONINE MODRES 2PYQ MSE C 101 MET SELENOMETHIONINE MODRES 2PYQ MSE D 1 MET SELENOMETHIONINE MODRES 2PYQ MSE D 21 MET SELENOMETHIONINE MODRES 2PYQ MSE D 25 MET SELENOMETHIONINE MODRES 2PYQ MSE D 64 MET SELENOMETHIONINE MODRES 2PYQ MSE D 76 MET SELENOMETHIONINE MODRES 2PYQ MSE D 101 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 21 8 HET MSE A 25 8 HET MSE A 64 13 HET MSE A 76 8 HET MSE A 101 13 HET MSE B 1 8 HET MSE B 21 8 HET MSE B 25 8 HET MSE B 64 8 HET MSE B 76 8 HET MSE B 101 13 HET MSE C 1 8 HET MSE C 21 13 HET MSE C 25 8 HET MSE C 64 8 HET MSE C 76 8 HET MSE C 101 8 HET MSE D 1 8 HET MSE D 21 8 HET MSE D 25 8 HET MSE D 64 8 HET MSE D 76 8 HET MSE D 101 8 HET PG4 D 114 7 HET PG4 D 115 7 HETNAM MSE SELENOMETHIONINE HETNAM PG4 TETRAETHYLENE GLYCOL FORMUL 1 MSE 24(C5 H11 N O2 SE) FORMUL 5 PG4 2(C8 H18 O5) FORMUL 7 HOH *304(H2 O) HELIX 1 1 GLY A 2 LYS A 18 1 17 HELIX 2 2 ASP A 24 GLY A 36 1 13 HELIX 3 3 ASN A 41 THR A 46 1 6 HELIX 4 4 ASP A 51 PHE A 62 1 12 HELIX 5 5 SER A 72 GLY A 87 1 16 HELIX 6 6 TYR A 94 PHE A 106 1 13 HELIX 7 7 LYS A 108 GLY A 113 5 6 HELIX 8 8 GLY B 2 LYS B 18 1 17 HELIX 9 9 ASP B 24 GLY B 36 1 13 HELIX 10 10 ASN B 41 THR B 46 1 6 HELIX 11 11 ASP B 51 PHE B 62 1 12 HELIX 12 12 SER B 72 GLY B 87 1 16 HELIX 13 13 TYR B 94 PHE B 106 1 13 HELIX 14 14 LYS B 108 GLY B 113 5 6 HELIX 15 15 GLY C 2 LYS C 18 1 17 HELIX 16 16 ASP C 24 GLY C 36 1 13 HELIX 17 17 PRO C 37 ASN C 41 5 5 HELIX 18 18 ASP C 51 PHE C 62 1 12 HELIX 19 19 SER C 72 GLY C 87 1 16 HELIX 20 20 TYR C 94 PHE C 106 1 13 HELIX 21 21 LYS C 108 GLY C 113 5 6 HELIX 22 22 GLY D 2 LYS D 18 1 17 HELIX 23 23 ASP D 24 CYS D 35 1 12 HELIX 24 24 GLY D 36 ASN D 41 5 6 HELIX 25 25 ASP D 51 PHE D 62 1 12 HELIX 26 26 GLU D 73 GLY D 87 1 15 HELIX 27 27 TYR D 94 PHE D 106 1 13 HELIX 28 28 LYS D 108 GLY D 113 5 6 LINK C GLY A 0 N MSE A 1 1555 1555 1.33 LINK C MSE A 1 N GLY A 2 1555 1555 1.31 LINK C GLY A 20 N MSE A 21 1555 1555 1.35 LINK C MSE A 21 N GLU A 22 1555 1555 1.33 LINK C ASP A 24 N MSE A 25 1555 1555 1.32 LINK C MSE A 25 N ALA A 26 1555 1555 1.34 LINK C LEU A 63 N MSE A 64 1555 1555 1.31 LINK C MSE A 64 N LYS A 65 1555 1555 1.32 LINK C LEU A 75 N MSE A 76 1555 1555 1.33 LINK C MSE A 76 N GLY A 77 1555 1555 1.32 LINK C TYR A 100 N MSE A 101 1555 1555 1.34 LINK C MSE A 101 N LEU A 102 1555 1555 1.32 LINK C GLY B 0 N MSE B 1 1555 1555 1.34 LINK C MSE B 1 N GLY B 2 1555 1555 1.34 LINK C GLY B 20 N MSE B 21 1555 1555 1.35 LINK C MSE B 21 N GLU B 22 1555 1555 1.33 LINK C ASP B 24 N MSE B 25 1555 1555 1.33 LINK C MSE B 25 N ALA B 26 1555 1555 1.34 LINK C LEU B 63 N MSE B 64 1555 1555 1.34 LINK C MSE B 64 N LYS B 65 1555 1555 1.32 LINK C LEU B 75 N MSE B 76 1555 1555 1.32 LINK C MSE B 76 N GLY B 77 1555 1555 1.33 LINK C TYR B 100 N MSE B 101 1555 1555 1.33 LINK C MSE B 101 N LEU B 102 1555 1555 1.32 LINK C GLY C 0 N MSE C 1 1555 1555 1.34 LINK C MSE C 1 N GLY C 2 1555 1555 1.36 LINK C GLY C 20 N MSE C 21 1555 1555 1.34 LINK C MSE C 21 N GLU C 22 1555 1555 1.33 LINK C ASP C 24 N MSE C 25 1555 1555 1.32 LINK C MSE C 25 N ALA C 26 1555 1555 1.33 LINK C LEU C 63 N MSE C 64 1555 1555 1.34 LINK C MSE C 64 N LYS C 65 1555 1555 1.32 LINK C LEU C 75 N MSE C 76 1555 1555 1.34 LINK C MSE C 76 N GLY C 77 1555 1555 1.34 LINK C TYR C 100 N MSE C 101 1555 1555 1.32 LINK C MSE C 101 N LEU C 102 1555 1555 1.34 LINK C GLY D 0 N MSE D 1 1555 1555 1.34 LINK C MSE D 1 N GLY D 2 1555 1555 1.35 LINK C GLY D 20 N MSE D 21 1555 1555 1.34 LINK C MSE D 21 N GLU D 22 1555 1555 1.33 LINK C ASP D 24 N MSE D 25 1555 1555 1.32 LINK C MSE D 25 N ALA D 26 1555 1555 1.34 LINK C LEU D 63 N MSE D 64 1555 1555 1.35 LINK C MSE D 64 N LYS D 65 1555 1555 1.33 LINK C LEU D 75 N MSE D 76 1555 1555 1.33 LINK C MSE D 76 N GLY D 77 1555 1555 1.33 LINK C TYR D 100 N MSE D 101 1555 1555 1.32 LINK C MSE D 101 N LEU D 102 1555 1555 1.32 SITE 1 AC1 5 LYS B 66 VAL B 111 TYR B 112 SER D 110 SITE 2 AC1 5 GLY D 113 SITE 1 AC2 7 ASP D 5 ILE D 8 MSE D 25 ALA D 53 SITE 2 AC2 7 GLU D 56 THR D 57 LYS D 60 CRYST1 32.920 98.710 58.560 90.00 90.39 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.030377 0.000000 0.000209 0.00000 SCALE2 0.000000 0.010131 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017077 0.00000