HEADER DNA BINDING PROTEIN 15-NOV-13 2MH3 TITLE NMR STRUCTURE OF THE BASIC HELIX-LOOP-HELIX REGION OF THE TITLE 2 TRANSCRIPTIONAL REPRESSOR HES-1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSCRIPTION FACTOR HES-1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 27-95; COMPND 5 SYNONYM: CLASS B BASIC HELIX-LOOP-HELIX PROTEIN 39, BHLHB39, HAIRY COMPND 6 AND ENHANCER OF SPLIT 1, HAIRY HOMOLOG, HAIRY-LIKE PROTEIN, HHL; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HES1, BHLHB39, HL, HRY; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PLASMID KEYWDS BHLH, DNA BINDING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR H.WIENK,M.POPOVIC,M.COGLIEVINA,R.BOELENS,S.PONGOR,A.PINTAR REVDAT 3 14-JUN-23 2MH3 1 REMARK SEQADV REVDAT 2 26-MAR-14 2MH3 1 JRNL REVDAT 1 05-FEB-14 2MH3 0 JRNL AUTH M.POPOVIC,H.WIENK,M.COGLIEVINA,R.BOELENS,S.PONGOR,A.PINTAR JRNL TITL THE BASIC HELIX-LOOP-HELIX REGION OF THE TRANSCRIPTIONAL JRNL TITL 2 REPRESSOR HAIRY AND ENHANCER OF SPLIT 1 IS PREORGANIZED TO JRNL TITL 3 BIND DNA. JRNL REF PROTEINS V. 82 537 2014 JRNL REFN ISSN 0887-3585 JRNL PMID 24403087 JRNL DOI 10.1002/PROT.24507 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CCPN_ANALYSIS, CNS REMARK 3 AUTHORS : CCPN (CCPN_ANALYSIS), BRUNGER, ADAMS, CLORE, GROS, REMARK 3 NILGES AND READ (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2MH3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-NOV-13. REMARK 100 THE DEPOSITION ID IS D_1000103609. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 288 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 50 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 2 MM [U-99% 13C; U-99% 15N] REMARK 210 PROTEIN, 50 MM POTASSIUM REMARK 210 PHOSPHATE, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : TRIPLE RESONANCE ASSIGNMENT; REMARK 210 RELAXATION; DNA TITRATION; NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 900 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CS-ROSETTA, TALOS+, CING, REMARK 210 NMRPIPE REMARK 210 METHOD USED : RESTRAINED MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LYS A 27 88.95 65.87 REMARK 500 1 SER A 32 -45.66 -147.89 REMARK 500 1 SER A 38 177.88 176.27 REMARK 500 1 LYS A 67 -77.44 -57.41 REMARK 500 1 LYS B 29 95.65 -67.93 REMARK 500 1 LYS B 36 87.34 -158.54 REMARK 500 1 SER B 38 -78.64 -152.96 REMARK 500 1 LYS B 67 -73.80 -78.27 REMARK 500 1 ALA B 94 36.99 -93.12 REMARK 500 2 ARG A 35 -57.04 -166.61 REMARK 500 2 LYS A 67 -76.99 -67.30 REMARK 500 2 THR B 30 81.42 48.29 REMARK 500 2 LYS B 67 -78.85 -82.75 REMARK 500 2 SER B 73 -27.55 86.23 REMARK 500 3 LYS A 27 93.05 56.32 REMARK 500 3 PRO A 28 48.08 -71.78 REMARK 500 3 ALA A 31 -25.94 -143.66 REMARK 500 3 LYS A 36 117.00 177.68 REMARK 500 3 SER A 38 36.70 -77.93 REMARK 500 3 LYS A 66 73.77 57.72 REMARK 500 3 ASP A 68 153.83 171.58 REMARK 500 3 ALA B 31 107.72 -59.93 REMARK 500 3 SER B 32 38.72 -143.44 REMARK 500 3 GLU B 33 -72.60 -77.79 REMARK 500 3 HIS B 34 18.38 -151.78 REMARK 500 3 LYS B 67 -70.52 -82.83 REMARK 500 3 ASP B 68 140.38 -174.72 REMARK 500 3 LYS B 74 65.97 -150.22 REMARK 500 4 GLU A 33 -12.31 73.90 REMARK 500 4 LYS A 67 -74.98 -64.45 REMARK 500 4 LYS B 27 85.42 63.77 REMARK 500 4 THR B 30 88.43 -156.32 REMARK 500 4 ALA B 31 -48.28 -177.09 REMARK 500 4 LYS B 67 -79.12 -66.86 REMARK 500 4 ASP B 68 146.25 -174.84 REMARK 500 5 LYS A 29 -51.35 -132.72 REMARK 500 5 GLU A 33 -65.93 70.16 REMARK 500 5 SER A 37 -32.84 71.87 REMARK 500 5 LYS A 67 -72.19 -65.57 REMARK 500 5 ASP B 68 145.96 -171.99 REMARK 500 6 PRO A 28 29.97 -76.51 REMARK 500 6 LYS A 29 144.93 69.75 REMARK 500 6 THR A 30 -37.22 70.69 REMARK 500 6 THR B 30 -74.09 67.78 REMARK 500 6 ALA B 31 124.99 61.92 REMARK 500 6 SER B 32 79.13 -107.67 REMARK 500 6 LYS B 67 -78.25 -76.66 REMARK 500 6 ASP B 68 150.74 176.94 REMARK 500 7 SER A 32 -172.57 63.16 REMARK 500 7 SER A 37 75.08 -103.09 REMARK 500 REMARK 500 THIS ENTRY HAS 180 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 2 ARG B 71 0.07 SIDE CHAIN REMARK 500 3 ARG A 46 0.07 SIDE CHAIN REMARK 500 5 ARG A 71 0.09 SIDE CHAIN REMARK 500 12 ARG A 46 0.09 SIDE CHAIN REMARK 500 12 ARG B 46 0.08 SIDE CHAIN REMARK 500 13 ARG A 71 0.09 SIDE CHAIN REMARK 500 14 ARG A 47 0.08 SIDE CHAIN REMARK 500 17 ARG A 71 0.08 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 19614 RELATED DB: BMRB DBREF 2MH3 A 27 95 UNP Q14469 HES1_HUMAN 27 95 DBREF 2MH3 B 27 95 UNP Q14469 HES1_HUMAN 27 95 SEQADV 2MH3 MET A 26 UNP Q14469 INITIATING METHIONINE SEQADV 2MH3 MET B 26 UNP Q14469 INITIATING METHIONINE SEQRES 1 A 70 MET LYS PRO LYS THR ALA SER GLU HIS ARG LYS SER SER SEQRES 2 A 70 LYS PRO ILE MET GLU LYS ARG ARG ARG ALA ARG ILE ASN SEQRES 3 A 70 GLU SER LEU SER GLN LEU LYS THR LEU ILE LEU ASP ALA SEQRES 4 A 70 LEU LYS LYS ASP SER SER ARG HIS SER LYS LEU GLU LYS SEQRES 5 A 70 ALA ASP ILE LEU GLU MET THR VAL LYS HIS LEU ARG ASN SEQRES 6 A 70 LEU GLN ARG ALA GLN SEQRES 1 B 70 MET LYS PRO LYS THR ALA SER GLU HIS ARG LYS SER SER SEQRES 2 B 70 LYS PRO ILE MET GLU LYS ARG ARG ARG ALA ARG ILE ASN SEQRES 3 B 70 GLU SER LEU SER GLN LEU LYS THR LEU ILE LEU ASP ALA SEQRES 4 B 70 LEU LYS LYS ASP SER SER ARG HIS SER LYS LEU GLU LYS SEQRES 5 B 70 ALA ASP ILE LEU GLU MET THR VAL LYS HIS LEU ARG ASN SEQRES 6 B 70 LEU GLN ARG ALA GLN HELIX 1 1 LYS A 39 LYS A 66 1 28 HELIX 2 2 SER A 70 LYS A 74 5 5 HELIX 3 3 GLU A 76 ALA A 94 1 19 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1 MODEL 2 MODEL 3 MODEL 4 MODEL 5 MODEL 6 MODEL 7 MODEL 8 MODEL 9 MODEL 10 MODEL 11 MODEL 12 MODEL 13 MODEL 14 MODEL 15 MODEL 16 MODEL 17 MODEL 18 MODEL 19 MODEL 20