HEADER SIGNALING PROTEIN 25-APR-08 2K39 TITLE RECOGNITION DYNAMICS UP TO MICROSECONDS REVEALED FROM RDC DERIVED TITLE 2 UBIQUITIN ENSEMBLE IN SOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: UBIQUITIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: XENOPUS LAEVIS; SOURCE 3 ORGANISM_COMMON: AFRICAN CLAWED FROG; SOURCE 4 ORGANISM_TAXID: 8355; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS UBIQUITIN, RDC, RESIDUAL DIPOLAR COUPLING, CYTOPLASM, NUCLEUS, UBL KEYWDS 2 CONJUGATION, SIGNALING PROTEIN EXPDTA SOLUTION NMR NUMMDL 116 AUTHOR O.F.LANGE,N.A.LAKOMEK,C.FARES,G.SCHRODER,K.WALTER,S.BECKER,J.MEILER, AUTHOR 2 H.GRUBMULLER,C.GRIESINGER,B.L.DE GROOT REVDAT 4 13-NOV-19 2K39 1 SOURCE KEYWDS REMARK REVDAT 3 24-FEB-09 2K39 1 VERSN REVDAT 2 01-JUL-08 2K39 1 JRNL REVDAT 1 24-JUN-08 2K39 0 JRNL AUTH O.F.LANGE,N.A.LAKOMEK,C.FARES,G.F.SCHRODER,K.F.WALTER, JRNL AUTH 2 S.BECKER,J.MEILER,H.GRUBMULLER,C.GRIESINGER,B.L.DE GROOT JRNL TITL RECOGNITION DYNAMICS UP TO MICROSECONDS REVEALED FROM AN JRNL TITL 2 RDC-DERIVED UBIQUITIN ENSEMBLE IN SOLUTION. JRNL REF SCIENCE V. 320 1471 2008 JRNL REFN ISSN 0036-8075 JRNL PMID 18556554 JRNL DOI 10.1126/SCIENCE.1157092 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRDRAW, GROMACS REMARK 3 AUTHORS : DELAGLIO, GRZESIEK, VUISTER, ZHU, PFEIFER AND BAX REMARK 3 (NMRDRAW), VAN GUNSTEREN AND BERENDSEN (GROMACS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: MOLECULAR DYNAMICS SIMULATED ANNEALING REMARK 3 ENSEMBLE REFINEMENT REMARK 4 REMARK 4 2K39 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-MAY-08. REMARK 100 THE DEPOSITION ID IS D_1000100620. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 308 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 50 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.9 MM [U-100% 13C; U-100% 15N] REMARK 210 UBIQUITIN, 50 MM SODIUM REMARK 210 PHOSPHATE, 90% H2O/10% D2O; 0.6 REMARK 210 MM [U-100% 13C; U-100% 15N] REMARK 210 UBIQUITIN, 50 MM SODIUM REMARK 210 PHOSPHATE, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 700 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE; DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CONCOORD REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 1000 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 116 REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HE21 GLN A 49 OE2 GLU A 51 1.57 REMARK 500 HZ2 LYS A 11 OE1 GLU A 34 1.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 1 ILE A 3 CA - CB - CG1 ANGL. DEV. = 11.8 DEGREES REMARK 500 1 PHE A 4 CB - CG - CD2 ANGL. DEV. = -5.3 DEGREES REMARK 500 1 PHE A 4 CB - CG - CD1 ANGL. DEV. = 4.6 DEGREES REMARK 500 1 PRO A 19 C - N - CA ANGL. DEV. = 10.9 DEGREES REMARK 500 1 ASP A 32 CB - CG - OD2 ANGL. DEV. = 7.0 DEGREES REMARK 500 1 ASP A 39 CB - CG - OD2 ANGL. DEV. = 5.8 DEGREES REMARK 500 1 ARG A 42 NE - CZ - NH2 ANGL. DEV. = -4.4 DEGREES REMARK 500 1 TYR A 59 CB - CG - CD1 ANGL. DEV. = -5.2 DEGREES REMARK 500 1 ARG A 74 CD - NE - CZ ANGL. DEV. = 9.0 DEGREES REMARK 500 1 ARG A 74 NH1 - CZ - NH2 ANGL. DEV. = -9.4 DEGREES REMARK 500 1 ARG A 74 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 1 ARG A 74 NE - CZ - NH2 ANGL. DEV. = 6.2 DEGREES REMARK 500 2 ALA A 28 CB - CA - C ANGL. DEV. = -9.0 DEGREES REMARK 500 2 ARG A 42 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 2 PHE A 45 CB - CG - CD2 ANGL. DEV. = -10.7 DEGREES REMARK 500 2 ASP A 52 CB - CG - OD1 ANGL. DEV. = 7.2 DEGREES REMARK 500 2 ARG A 54 NE - CZ - NH2 ANGL. DEV. = 4.7 DEGREES REMARK 500 3 ASP A 32 CB - CG - OD1 ANGL. DEV. = -5.8 DEGREES REMARK 500 3 PRO A 38 C - N - CA ANGL. DEV. = 9.3 DEGREES REMARK 500 3 PRO A 38 N - CA - CB ANGL. DEV. = 8.0 DEGREES REMARK 500 3 ARG A 42 CD - NE - CZ ANGL. DEV. = 10.1 DEGREES REMARK 500 3 ARG A 42 NE - CZ - NH1 ANGL. DEV. = -3.6 DEGREES REMARK 500 3 ARG A 42 NE - CZ - NH2 ANGL. DEV. = 6.5 DEGREES REMARK 500 3 ARG A 54 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 3 ARG A 74 NE - CZ - NH1 ANGL. DEV. = -3.2 DEGREES REMARK 500 4 PRO A 38 C - N - CA ANGL. DEV. = 9.4 DEGREES REMARK 500 4 ASP A 39 CB - CG - OD1 ANGL. DEV. = 5.7 DEGREES REMARK 500 4 ARG A 42 NH1 - CZ - NH2 ANGL. DEV. = 8.0 DEGREES REMARK 500 4 ARG A 42 NE - CZ - NH1 ANGL. DEV. = -3.5 DEGREES REMARK 500 4 ARG A 42 NE - CZ - NH2 ANGL. DEV. = -4.9 DEGREES REMARK 500 4 ASP A 58 CB - CG - OD2 ANGL. DEV. = -5.4 DEGREES REMARK 500 5 LEU A 8 CB - CG - CD1 ANGL. DEV. = 11.0 DEGREES REMARK 500 5 ASP A 21 CB - CG - OD2 ANGL. DEV. = -6.1 DEGREES REMARK 500 5 ARG A 42 NE - CZ - NH1 ANGL. DEV. = 5.3 DEGREES REMARK 500 5 LEU A 50 CB - CG - CD2 ANGL. DEV. = 13.0 DEGREES REMARK 500 5 ARG A 54 NE - CZ - NH1 ANGL. DEV. = 5.3 DEGREES REMARK 500 5 ARG A 54 NE - CZ - NH2 ANGL. DEV. = -8.4 DEGREES REMARK 500 5 TYR A 59 CB - CG - CD1 ANGL. DEV. = -3.6 DEGREES REMARK 500 5 ARG A 72 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 5 ARG A 72 NE - CZ - NH2 ANGL. DEV. = -7.2 DEGREES REMARK 500 5 LEU A 73 CB - CA - C ANGL. DEV. = 12.2 DEGREES REMARK 500 5 ARG A 74 NH1 - CZ - NH2 ANGL. DEV. = 6.8 DEGREES REMARK 500 5 ARG A 74 NE - CZ - NH2 ANGL. DEV. = -5.7 DEGREES REMARK 500 6 PHE A 4 CB - CG - CD2 ANGL. DEV. = -6.6 DEGREES REMARK 500 6 LYS A 29 O - C - N ANGL. DEV. = -9.7 DEGREES REMARK 500 6 PRO A 38 C - N - CA ANGL. DEV. = 9.9 DEGREES REMARK 500 6 PRO A 38 N - CA - CB ANGL. DEV. = 7.2 DEGREES REMARK 500 6 ARG A 42 NE - CZ - NH1 ANGL. DEV. = -4.0 DEGREES REMARK 500 6 PHE A 45 CB - CG - CD2 ANGL. DEV. = -5.8 DEGREES REMARK 500 6 ARG A 54 NE - CZ - NH1 ANGL. DEV. = 4.0 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 903 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LEU A 8 -43.12 -27.04 REMARK 500 1 LYS A 63 104.83 -51.81 REMARK 500 1 ARG A 72 -52.65 80.42 REMARK 500 2 ALA A 46 -110.68 -142.43 REMARK 500 2 LYS A 63 129.79 -39.36 REMARK 500 2 GLU A 64 38.83 70.79 REMARK 500 3 LYS A 33 -61.81 -94.22 REMARK 500 3 ASN A 60 20.74 87.37 REMARK 500 3 GLU A 64 15.26 85.29 REMARK 500 4 GLU A 64 10.82 57.81 REMARK 500 5 LYS A 33 -66.94 -98.55 REMARK 500 5 GLN A 62 -160.07 -124.32 REMARK 500 5 GLU A 64 10.08 81.96 REMARK 500 5 ARG A 72 -53.36 73.42 REMARK 500 6 PRO A 37 129.11 -39.27 REMARK 500 6 ASN A 60 42.59 74.72 REMARK 500 6 GLU A 64 13.72 57.34 REMARK 500 6 LEU A 73 93.95 -53.78 REMARK 500 7 PRO A 19 -19.47 -47.02 REMARK 500 7 LYS A 63 131.95 84.51 REMARK 500 7 GLU A 64 41.38 72.53 REMARK 500 8 THR A 9 -30.76 -35.46 REMARK 500 8 PHE A 45 137.73 -170.76 REMARK 500 8 ASP A 52 145.67 103.72 REMARK 500 8 ASN A 60 64.28 90.33 REMARK 500 8 GLU A 64 19.62 59.92 REMARK 500 9 ASP A 39 -31.89 -39.49 REMARK 500 9 ALA A 46 -123.86 -143.43 REMARK 500 9 ARG A 72 55.32 -108.78 REMARK 500 10 LYS A 33 -77.33 -81.55 REMARK 500 11 GLU A 64 -6.21 84.60 REMARK 500 12 LEU A 8 -45.94 -28.13 REMARK 500 12 PHE A 45 -149.85 -116.56 REMARK 500 12 ALA A 46 66.24 -59.14 REMARK 500 12 LYS A 63 152.18 -37.88 REMARK 500 12 GLU A 64 -9.91 77.05 REMARK 500 12 ARG A 72 97.04 -69.46 REMARK 500 12 ARG A 74 -64.40 91.57 REMARK 500 13 LYS A 63 131.73 -30.20 REMARK 500 14 LEU A 8 -39.72 -24.14 REMARK 500 14 GLU A 34 -7.15 -144.13 REMARK 500 14 GLU A 64 3.98 93.28 REMARK 500 14 ARG A 72 -4.40 96.72 REMARK 500 15 LYS A 33 -72.16 -81.46 REMARK 500 15 ALA A 46 24.87 84.37 REMARK 500 15 ARG A 74 -32.26 82.84 REMARK 500 16 ASN A 60 50.80 73.57 REMARK 500 16 ILE A 61 69.05 -109.10 REMARK 500 16 LYS A 63 90.87 89.03 REMARK 500 16 GLU A 64 47.30 86.41 REMARK 500 REMARK 500 THIS ENTRY HAS 368 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LEU A 50 GLU A 51 1 -147.92 REMARK 500 GLN A 41 ARG A 42 2 149.27 REMARK 500 THR A 22 ILE A 23 8 146.20 REMARK 500 ILE A 13 THR A 14 13 149.65 REMARK 500 LEU A 50 GLU A 51 13 -149.78 REMARK 500 LEU A 71 ARG A 72 13 148.24 REMARK 500 LEU A 73 ARG A 74 15 148.69 REMARK 500 ILE A 61 GLN A 62 16 -147.95 REMARK 500 LYS A 11 THR A 12 17 149.86 REMARK 500 THR A 9 GLY A 10 18 142.75 REMARK 500 ARG A 42 LEU A 43 19 -148.98 REMARK 500 LYS A 33 GLU A 34 21 -147.65 REMARK 500 LYS A 33 GLU A 34 22 147.19 REMARK 500 THR A 9 GLY A 10 23 147.26 REMARK 500 LYS A 33 GLU A 34 25 -148.80 REMARK 500 GLN A 41 ARG A 42 27 144.06 REMARK 500 VAL A 70 LEU A 71 27 -147.89 REMARK 500 THR A 9 GLY A 10 36 118.58 REMARK 500 GLN A 41 ARG A 42 36 146.94 REMARK 500 GLN A 41 ARG A 42 37 141.69 REMARK 500 VAL A 17 GLU A 18 47 148.89 REMARK 500 LEU A 71 ARG A 72 49 149.58 REMARK 500 PHE A 4 VAL A 5 53 148.42 REMARK 500 GLU A 51 ASP A 52 54 138.18 REMARK 500 GLN A 2 ILE A 3 55 145.54 REMARK 500 LYS A 33 GLU A 34 60 -149.64 REMARK 500 THR A 9 GLY A 10 62 144.58 REMARK 500 GLN A 41 ARG A 42 64 141.90 REMARK 500 GLN A 62 LYS A 63 70 149.84 REMARK 500 LEU A 71 ARG A 72 76 148.08 REMARK 500 THR A 9 GLY A 10 77 142.87 REMARK 500 GLN A 62 LYS A 63 77 139.52 REMARK 500 VAL A 17 GLU A 18 80 148.08 REMARK 500 GLN A 41 ARG A 42 86 147.74 REMARK 500 GLN A 41 ARG A 42 88 148.31 REMARK 500 VAL A 17 GLU A 18 96 145.83 REMARK 500 GLU A 34 GLY A 35 101 -149.71 REMARK 500 THR A 9 GLY A 10 103 123.30 REMARK 500 VAL A 17 GLU A 18 106 148.58 REMARK 500 GLN A 41 ARG A 42 106 149.97 REMARK 500 THR A 9 GLY A 10 107 137.46 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 TYR A 59 0.10 SIDE CHAIN REMARK 500 2 TYR A 59 0.08 SIDE CHAIN REMARK 500 5 ARG A 54 0.10 SIDE CHAIN REMARK 500 6 ARG A 72 0.09 SIDE CHAIN REMARK 500 8 ARG A 42 0.10 SIDE CHAIN REMARK 500 8 TYR A 59 0.07 SIDE CHAIN REMARK 500 8 HIS A 68 0.08 SIDE CHAIN REMARK 500 9 TYR A 59 0.07 SIDE CHAIN REMARK 500 10 ARG A 42 0.12 SIDE CHAIN REMARK 500 11 ARG A 42 0.11 SIDE CHAIN REMARK 500 13 ARG A 42 0.10 SIDE CHAIN REMARK 500 16 TYR A 59 0.11 SIDE CHAIN REMARK 500 17 TYR A 59 0.10 SIDE CHAIN REMARK 500 18 ASP A 39 0.07 SIDE CHAIN REMARK 500 19 ARG A 74 0.10 SIDE CHAIN REMARK 500 20 PHE A 45 0.09 SIDE CHAIN REMARK 500 22 ARG A 42 0.08 SIDE CHAIN REMARK 500 23 ARG A 42 0.10 SIDE CHAIN REMARK 500 24 PHE A 4 0.10 SIDE CHAIN REMARK 500 24 ARG A 74 0.08 SIDE CHAIN REMARK 500 27 ARG A 42 0.08 SIDE CHAIN REMARK 500 27 TYR A 59 0.07 SIDE CHAIN REMARK 500 27 ARG A 72 0.08 SIDE CHAIN REMARK 500 28 TYR A 59 0.13 SIDE CHAIN REMARK 500 32 ARG A 42 0.10 SIDE CHAIN REMARK 500 33 TYR A 59 0.08 SIDE CHAIN REMARK 500 35 ARG A 74 0.08 SIDE CHAIN REMARK 500 36 TYR A 59 0.09 SIDE CHAIN REMARK 500 37 TYR A 59 0.10 SIDE CHAIN REMARK 500 38 ARG A 72 0.11 SIDE CHAIN REMARK 500 40 ARG A 42 0.07 SIDE CHAIN REMARK 500 40 PHE A 45 0.08 SIDE CHAIN REMARK 500 40 TYR A 59 0.09 SIDE CHAIN REMARK 500 42 ARG A 42 0.08 SIDE CHAIN REMARK 500 42 ARG A 54 0.10 SIDE CHAIN REMARK 500 43 ARG A 72 0.09 SIDE CHAIN REMARK 500 44 PHE A 45 0.10 SIDE CHAIN REMARK 500 47 TYR A 59 0.12 SIDE CHAIN REMARK 500 48 ARG A 74 0.07 SIDE CHAIN REMARK 500 50 PHE A 45 0.07 SIDE CHAIN REMARK 500 50 TYR A 59 0.08 SIDE CHAIN REMARK 500 51 TYR A 59 0.08 SIDE CHAIN REMARK 500 52 TYR A 59 0.07 SIDE CHAIN REMARK 500 54 ARG A 74 0.11 SIDE CHAIN REMARK 500 55 TYR A 59 0.07 SIDE CHAIN REMARK 500 56 TYR A 59 0.11 SIDE CHAIN REMARK 500 57 ARG A 54 0.10 SIDE CHAIN REMARK 500 57 TYR A 59 0.07 SIDE CHAIN REMARK 500 59 PHE A 4 0.07 SIDE CHAIN REMARK 500 61 TYR A 59 0.06 SIDE CHAIN REMARK 500 REMARK 500 THIS ENTRY HAS 90 PLANE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 5 THR A 66 -10.48 REMARK 500 7 ASN A 25 -11.69 REMARK 500 12 LYS A 11 -11.26 REMARK 500 16 GLN A 31 -11.23 REMARK 500 17 GLU A 51 10.20 REMARK 500 19 LEU A 43 10.10 REMARK 500 23 ARG A 42 11.71 REMARK 500 36 ASP A 21 10.10 REMARK 500 38 VAL A 70 -11.08 REMARK 500 48 GLU A 51 -10.04 REMARK 500 49 THR A 9 -10.55 REMARK 500 57 ILE A 23 -11.67 REMARK 500 59 LEU A 56 -12.26 REMARK 500 65 LEU A 15 -10.86 REMARK 500 65 LEU A 73 10.02 REMARK 500 68 ASP A 32 -10.61 REMARK 500 72 PRO A 38 -12.02 REMARK 500 72 ASP A 52 10.55 REMARK 500 73 PRO A 37 -16.41 REMARK 500 82 ASP A 39 -11.37 REMARK 500 85 ILE A 23 -11.24 REMARK 500 85 ALA A 28 -10.92 REMARK 500 85 ASP A 52 -11.12 REMARK 500 86 VAL A 26 -10.36 REMARK 500 92 GLN A 62 10.19 REMARK 500 94 GLU A 24 -10.96 REMARK 500 96 GLY A 75 10.46 REMARK 500 97 LEU A 15 -10.26 REMARK 500 02 ILE A 30 -10.07 REMARK 500 10 GLY A 47 -10.77 REMARK 500 11 VAL A 70 10.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 15772 RELATED DB: BMRB DBREF 2K39 A 1 76 UNP P62972 UBIQ_XENLA 1 76 SEQRES 1 A 76 MET GLN ILE PHE VAL LYS THR LEU THR GLY LYS THR ILE SEQRES 2 A 76 THR LEU GLU VAL GLU PRO SER ASP THR ILE GLU ASN VAL SEQRES 3 A 76 LYS ALA LYS ILE GLN ASP LYS GLU GLY ILE PRO PRO ASP SEQRES 4 A 76 GLN GLN ARG LEU ILE PHE ALA GLY LYS GLN LEU GLU ASP SEQRES 5 A 76 GLY ARG THR LEU SER ASP TYR ASN ILE GLN LYS GLU SER SEQRES 6 A 76 THR LEU HIS LEU VAL LEU ARG LEU ARG GLY GLY HELIX 1 1 THR A 22 GLU A 34 1 13 SHEET 1 A 5 THR A 12 GLU A 16 0 SHEET 2 A 5 GLN A 2 THR A 7 -1 N VAL A 5 O ILE A 13 SHEET 3 A 5 THR A 66 LEU A 71 1 O LEU A 67 N LYS A 6 SHEET 4 A 5 GLN A 41 PHE A 45 -1 N ILE A 44 O HIS A 68 SHEET 5 A 5 LYS A 48 GLN A 49 -1 O LYS A 48 N PHE A 45 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1 MODEL 2 MODEL 3 MODEL 4 MODEL 5 MODEL 6 MODEL 7 MODEL 8 MODEL 9 MODEL 10 MODEL 11 MODEL 12 MODEL 13 MODEL 14 MODEL 15 MODEL 16 MODEL 17 MODEL 18 MODEL 19 MODEL 20 MODEL 21 MODEL 22 MODEL 23 MODEL 24 MODEL 25 MODEL 26 MODEL 27 MODEL 28 MODEL 29 MODEL 30 MODEL 31 MODEL 32 MODEL 33 MODEL 34 MODEL 35 MODEL 36 MODEL 37 MODEL 38 MODEL 39 MODEL 40 MODEL 41 MODEL 42 MODEL 43 MODEL 44 MODEL 45 MODEL 46 MODEL 47 MODEL 48 MODEL 49 MODEL 50 MODEL 51 MODEL 52 MODEL 53 MODEL 54 MODEL 55 MODEL 56 MODEL 57 MODEL 58 MODEL 59 MODEL 60 MODEL 61 MODEL 62 MODEL 63 MODEL 64 MODEL 65 MODEL 66 MODEL 67 MODEL 68 MODEL 69 MODEL 70 MODEL 71 MODEL 72 MODEL 73 MODEL 74 MODEL 75 MODEL 76 MODEL 77 MODEL 78 MODEL 79 MODEL 80 MODEL 81 MODEL 82 MODEL 83 MODEL 84 MODEL 85 MODEL 86 MODEL 87 MODEL 88 MODEL 89 MODEL 90 MODEL 91 MODEL 92 MODEL 93 MODEL 94 MODEL 95 MODEL 96 MODEL 97 MODEL 98 MODEL 99 MODEL 100 MODEL 101 MODEL 102 MODEL 103 MODEL 104 MODEL 105 MODEL 106 MODEL 107 MODEL 108 MODEL 109 MODEL 110 MODEL 111 MODEL 112 MODEL 113 MODEL 114 MODEL 115 MODEL 116