HEADER LIPID TRANSPORT 27-FEB-01 1I5J TITLE NMR STRUCTURE OF HUMAN APOLIPOPROTEIN C-II IN THE PRESENCE OF SDS COMPND MOL_ID: 1; COMPND 2 MOLECULE: APOLIPOPROTEIN CII; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: APOC-II; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PROTEIN-LIPID INTERACTION, AMPHIPATHIC ALPHA HELIX, LIPID TRANSPORT EXPDTA SOLUTION NMR NUMMDL 25 AUTHOR C.A.MACRAILD,D.M.HATTERS,G.J.HOWLETT,P.R.GOOLEY REVDAT 3 23-FEB-22 1I5J 1 REMARK REVDAT 2 24-FEB-09 1I5J 1 VERSN REVDAT 1 16-MAY-01 1I5J 0 JRNL AUTH C.A.MACRAILD,D.M.HATTERS,G.J.HOWLETT,P.R.GOOLEY JRNL TITL NMR STRUCTURE OF HUMAN APOLIPOPROTEIN C-II IN THE PRESENCE JRNL TITL 2 OF SODIUM DODECYL SULFATE. JRNL REF BIOCHEMISTRY V. 40 5414 2001 JRNL REFN ISSN 0006-2960 JRNL PMID 11331005 JRNL DOI 10.1021/BI002821M REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRPIPE 1.7, CNS 0.9 REMARK 3 AUTHORS : DELAGLIO (NMRPIPE), BRUNGER (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1I5J COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-MAR-01. REMARK 100 THE DEPOSITION ID IS D_1000012930. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 313 REMARK 210 PH : 5.0 REMARK 210 IONIC STRENGTH : 20 MM SODIUM ACETATE, 220 MM REMARK 210 SODIUM DODECY SULFATE REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.8 MM U-15N APOC-II; 220 MM REMARK 210 SDS; 20 MM SODIUM ACETATE, PH5 REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; HNHA; REMARK 210 HMQC-NOESY-HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XEASY 1.4, DYANA 1.5 REMARK 210 METHOD USED : TORSION ANGLE AND CARTESIAN REMARK 210 DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 25 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH FAVOURABLE NON REMARK 210 -BOND ENERGY AND MINIMAL REMARK 210 CONSTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 5 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-25 REMARK 465 RES C SSSEQI REMARK 465 THR A 1 REMARK 465 GLN A 2 REMARK 465 GLN A 3 REMARK 465 PRO A 4 REMARK 465 GLN A 5 REMARK 465 GLN A 6 REMARK 465 ASP A 7 REMARK 465 GLU A 8 REMARK 465 MET A 9 REMARK 465 PRO A 10 REMARK 465 SER A 11 REMARK 465 PRO A 12 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PHE A 14 -60.99 -164.28 REMARK 500 1 TYR A 37 -78.02 -66.60 REMARK 500 1 GLU A 38 26.91 -163.70 REMARK 500 1 THR A 40 -21.35 -141.83 REMARK 500 1 LEU A 42 48.93 -152.51 REMARK 500 1 VAL A 45 -88.89 -146.87 REMARK 500 1 ASP A 46 98.65 66.19 REMARK 500 1 GLU A 47 -74.36 37.58 REMARK 500 1 LYS A 48 -33.90 -39.50 REMARK 500 1 ARG A 50 35.73 -96.77 REMARK 500 1 ASP A 51 -39.03 -130.07 REMARK 500 1 THR A 57 32.57 178.51 REMARK 500 1 ALA A 58 42.90 75.45 REMARK 500 2 TYR A 37 -7.78 -163.75 REMARK 500 2 LEU A 42 -61.20 -143.99 REMARK 500 2 ALA A 44 18.01 -155.23 REMARK 500 2 ARG A 50 97.00 -173.01 REMARK 500 2 ASP A 51 -44.80 -163.49 REMARK 500 2 LYS A 55 -50.34 -145.76 REMARK 500 3 PHE A 14 -15.91 67.06 REMARK 500 3 TYR A 37 -14.04 -173.75 REMARK 500 3 TYR A 41 -76.16 -57.90 REMARK 500 3 LEU A 42 56.15 -149.85 REMARK 500 3 PRO A 43 -70.45 -89.37 REMARK 500 3 ALA A 44 57.42 -173.12 REMARK 500 4 PHE A 14 -60.98 -150.54 REMARK 500 4 GLU A 38 -40.57 -141.53 REMARK 500 4 LEU A 42 -59.19 -142.74 REMARK 500 4 PRO A 43 48.94 -71.39 REMARK 500 4 ALA A 44 25.41 -177.23 REMARK 500 4 VAL A 45 -55.12 -142.62 REMARK 500 4 THR A 57 26.36 -174.80 REMARK 500 4 ALA A 58 39.91 81.27 REMARK 500 5 PHE A 14 -44.56 -143.16 REMARK 500 5 GLU A 38 -55.47 -139.77 REMARK 500 5 TYR A 41 -159.75 -67.38 REMARK 500 5 PRO A 43 19.62 -68.18 REMARK 500 5 ASP A 51 -49.27 -157.22 REMARK 500 5 ALA A 58 -46.43 -138.79 REMARK 500 6 GLU A 38 -62.39 -144.00 REMARK 500 6 PRO A 43 46.87 -76.67 REMARK 500 6 GLU A 47 46.23 -77.45 REMARK 500 6 LYS A 48 24.12 48.61 REMARK 500 6 VAL A 71 -66.42 -99.69 REMARK 500 6 LYS A 76 -67.60 -134.67 REMARK 500 6 GLU A 78 63.14 79.62 REMARK 500 7 TYR A 37 -75.06 -125.56 REMARK 500 7 THR A 40 -36.40 78.82 REMARK 500 7 TYR A 41 -49.86 -21.04 REMARK 500 7 LEU A 42 170.96 -58.27 REMARK 500 REMARK 500 THIS ENTRY HAS 175 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL DBREF 1I5J A 1 79 UNP P02655 APOC2_HUMAN 1 79 SEQRES 1 A 79 THR GLN GLN PRO GLN GLN ASP GLU MET PRO SER PRO THR SEQRES 2 A 79 PHE LEU THR GLN VAL LYS GLU SER LEU SER SER TYR TRP SEQRES 3 A 79 GLU SER ALA LYS THR ALA ALA GLN ASN LEU TYR GLU LYS SEQRES 4 A 79 THR TYR LEU PRO ALA VAL ASP GLU LYS LEU ARG ASP LEU SEQRES 5 A 79 TYR SER LYS SER THR ALA ALA MET SER THR TYR THR GLY SEQRES 6 A 79 ILE PHE THR ASP GLN VAL LEU SER VAL LEU LYS GLY GLU SEQRES 7 A 79 GLU HELIX 1 1 PHE A 14 LEU A 36 1 23 HELIX 2 2 THR A 62 LYS A 76 1 15 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1 MODEL 2 MODEL 3 MODEL 4 MODEL 5 MODEL 6 MODEL 7 MODEL 8 MODEL 9 MODEL 10 MODEL 11 MODEL 12 MODEL 13 MODEL 14 MODEL 15 MODEL 16 MODEL 17 MODEL 18 MODEL 19 MODEL 20 MODEL 21 MODEL 22 MODEL 23 MODEL 24 MODEL 25