HEADER SIGNALING PROTEIN 16-JUL-18 6H2T TITLE GLNH BOUND TO GLU, MYCOBACTERIUM TUBERCULOSIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROBABLE GLUTAMINE-BINDING LIPOPROTEIN GLNH (GLNBP); COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS H37RV; SOURCE 3 ORGANISM_TAXID: 83332; SOURCE 4 GENE: GLNH, RV0411C; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SOLUTE-BINDING PROTEIN, AMINO ACID BINDING, TRANSPORT, SERINE KEYWDS 2 THREONINE PROTEIN KINASE, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR H.M.O'HARE,R.WALLIS,L.Y.LIN,Z.NEWLAND-SMITH REVDAT 3 17-JAN-24 6H2T 1 REMARK REVDAT 2 15-AUG-18 6H2T 1 JRNL REVDAT 1 25-JUL-18 6H2T 0 JRNL AUTH N.BHATTACHARYYA,I.N.NKUMAMA,Z.NEWLAND-SMITH,L.Y.LIN,W.YIN, JRNL AUTH 2 R.E.CULLEN,J.S.GRIFFITHS,A.R.JARVIS,M.J.PRICE,P.Y.CHONG, JRNL AUTH 3 R.WALLIS,H.M.O'HARE JRNL TITL AN ASPARTATE-SPECIFIC SOLUTE-BINDING PROTEIN REGULATES JRNL TITL 2 PROTEIN KINASE G ACTIVITY TO CONTROL GLUTAMATE METABOLISM IN JRNL TITL 3 MYCOBACTERIA. JRNL REF MBIO V. 9 2018 JRNL REFN ESSN 2150-7511 JRNL PMID 30065086 JRNL DOI 10.1128/MBIO.00931-18 REMARK 2 REMARK 2 RESOLUTION. 1.67 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_2722 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.67 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.94 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 40215 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.163 REMARK 3 R VALUE (WORKING SET) : 0.162 REMARK 3 FREE R VALUE : 0.179 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.810 REMARK 3 FREE R VALUE TEST SET COUNT : 1934 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.9503 - 4.0239 1.00 2923 146 0.1594 0.1637 REMARK 3 2 4.0239 - 3.1943 1.00 2812 119 0.1481 0.1504 REMARK 3 3 3.1943 - 2.7906 1.00 2750 142 0.1542 0.2050 REMARK 3 4 2.7906 - 2.5355 1.00 2763 125 0.1669 0.1896 REMARK 3 5 2.5355 - 2.3538 1.00 2725 154 0.1579 0.1718 REMARK 3 6 2.3538 - 2.2150 1.00 2689 167 0.1566 0.1474 REMARK 3 7 2.2150 - 2.1041 1.00 2754 113 0.1585 0.1701 REMARK 3 8 2.1041 - 2.0125 1.00 2717 116 0.1516 0.1956 REMARK 3 9 2.0125 - 1.9350 1.00 2733 118 0.1626 0.1959 REMARK 3 10 1.9350 - 1.8682 1.00 2684 148 0.1761 0.1917 REMARK 3 11 1.8682 - 1.8098 1.00 2695 139 0.1852 0.2002 REMARK 3 12 1.8098 - 1.7581 1.00 2674 147 0.1905 0.2095 REMARK 3 13 1.7581 - 1.7118 1.00 2677 146 0.2109 0.2388 REMARK 3 14 1.7118 - 1.6700 1.00 2685 154 0.2188 0.2463 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.130 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 15.950 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.63 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2272 REMARK 3 ANGLE : 0.930 3110 REMARK 3 CHIRALITY : 0.059 367 REMARK 3 PLANARITY : 0.006 411 REMARK 3 DIHEDRAL : 5.121 1931 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 42 THROUGH 61 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.8281 -22.9218 7.7996 REMARK 3 T TENSOR REMARK 3 T11: 0.2131 T22: 0.2385 REMARK 3 T33: 0.2773 T12: -0.0206 REMARK 3 T13: 0.0829 T23: -0.0188 REMARK 3 L TENSOR REMARK 3 L11: 1.9454 L22: 3.5199 REMARK 3 L33: 3.5921 L12: -2.3104 REMARK 3 L13: -0.8068 L23: -0.6195 REMARK 3 S TENSOR REMARK 3 S11: 0.1982 S12: -0.3280 S13: 0.3683 REMARK 3 S21: 0.2098 S22: -0.1071 S23: 0.1466 REMARK 3 S31: 0.2371 S32: -0.2254 S33: 0.0228 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 62 THROUGH 91 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.5086 4.9657 12.8047 REMARK 3 T TENSOR REMARK 3 T11: 0.2009 T22: 0.1409 REMARK 3 T33: 0.1881 T12: -0.0246 REMARK 3 T13: 0.0198 T23: -0.0159 REMARK 3 L TENSOR REMARK 3 L11: 1.5178 L22: 2.5270 REMARK 3 L33: 2.0098 L12: -0.9848 REMARK 3 L13: -0.4353 L23: 0.2946 REMARK 3 S TENSOR REMARK 3 S11: 0.1111 S12: -0.0518 S13: 0.2332 REMARK 3 S21: -0.1202 S22: -0.0724 S23: -0.3015 REMARK 3 S31: 0.0093 S32: 0.1393 S33: -0.0584 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 92 THROUGH 131 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.6614 -13.3656 8.8938 REMARK 3 T TENSOR REMARK 3 T11: 0.1150 T22: 0.1521 REMARK 3 T33: 0.1353 T12: -0.0178 REMARK 3 T13: -0.0239 T23: -0.0209 REMARK 3 L TENSOR REMARK 3 L11: 0.9690 L22: 3.7964 REMARK 3 L33: 2.0837 L12: -1.1926 REMARK 3 L13: 0.0885 L23: -0.8079 REMARK 3 S TENSOR REMARK 3 S11: 0.0561 S12: 0.0738 S13: -0.1510 REMARK 3 S21: -0.2814 S22: -0.0435 S23: 0.4010 REMARK 3 S31: 0.1234 S32: -0.2087 S33: -0.0003 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 132 THROUGH 219 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.6153 -14.2695 12.1170 REMARK 3 T TENSOR REMARK 3 T11: 0.1169 T22: 0.1425 REMARK 3 T33: 0.1233 T12: -0.0179 REMARK 3 T13: 0.0255 T23: -0.0108 REMARK 3 L TENSOR REMARK 3 L11: 1.1985 L22: 2.5332 REMARK 3 L33: 0.9748 L12: -1.0964 REMARK 3 L13: 0.3573 L23: -0.5230 REMARK 3 S TENSOR REMARK 3 S11: 0.0398 S12: 0.0475 S13: 0.0909 REMARK 3 S21: -0.1005 S22: -0.0763 S23: -0.1819 REMARK 3 S31: -0.0411 S32: 0.0759 S33: 0.0394 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 220 THROUGH 246 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.1797 -28.7069 10.4745 REMARK 3 T TENSOR REMARK 3 T11: 0.1595 T22: 0.1447 REMARK 3 T33: 0.1315 T12: 0.0055 REMARK 3 T13: 0.0409 T23: -0.0063 REMARK 3 L TENSOR REMARK 3 L11: 6.0589 L22: 2.2611 REMARK 3 L33: 3.1019 L12: -0.4954 REMARK 3 L13: 1.5524 L23: -0.1205 REMARK 3 S TENSOR REMARK 3 S11: -0.0311 S12: 0.0137 S13: -0.1837 REMARK 3 S21: -0.1402 S22: 0.0011 S23: -0.1392 REMARK 3 S31: 0.1416 S32: 0.0182 S33: 0.0668 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 247 THROUGH 277 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.7181 -23.0436 19.7418 REMARK 3 T TENSOR REMARK 3 T11: 0.1299 T22: 0.1650 REMARK 3 T33: 0.1179 T12: 0.0043 REMARK 3 T13: 0.0129 T23: -0.0001 REMARK 3 L TENSOR REMARK 3 L11: 0.9494 L22: 6.1102 REMARK 3 L33: 0.7764 L12: 0.1251 REMARK 3 L13: -0.4828 L23: -1.0195 REMARK 3 S TENSOR REMARK 3 S11: -0.0708 S12: -0.1053 S13: -0.0606 REMARK 3 S21: 0.0582 S22: 0.0517 S23: 0.0530 REMARK 3 S31: 0.0565 S32: -0.0049 S33: 0.0235 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 278 THROUGH 328 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.4511 -4.6626 19.6005 REMARK 3 T TENSOR REMARK 3 T11: 0.1398 T22: 0.1668 REMARK 3 T33: 0.1101 T12: 0.0026 REMARK 3 T13: -0.0044 T23: -0.0239 REMARK 3 L TENSOR REMARK 3 L11: 1.4663 L22: 3.8187 REMARK 3 L33: 1.7436 L12: -0.1878 REMARK 3 L13: -0.3413 L23: 0.1528 REMARK 3 S TENSOR REMARK 3 S11: 0.0246 S12: -0.2211 S13: 0.0584 REMARK 3 S21: 0.3671 S22: -0.0342 S23: 0.0152 REMARK 3 S31: -0.0881 S32: 0.0281 S33: 0.0095 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 1 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.5075 -14.4163 12.8221 REMARK 3 T TENSOR REMARK 3 T11: 0.1340 T22: 0.1595 REMARK 3 T33: 0.1679 T12: -0.0100 REMARK 3 T13: 0.0113 T23: -0.0073 REMARK 3 L TENSOR REMARK 3 L11: 2.0000 L22: 2.0000 REMARK 3 L33: 2.0000 L12: 2.0000 REMARK 3 L13: 2.2345 L23: 2.0001 REMARK 3 S TENSOR REMARK 3 S11: 0.0797 S12: -0.6667 S13: 0.2193 REMARK 3 S21: -0.1991 S22: -0.7096 S23: 0.5123 REMARK 3 S31: 0.0580 S32: -0.3323 S33: 0.6372 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6H2T COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 16-JUL-18. REMARK 100 THE DEPOSITION ID IS D_1200010953. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-SEP-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40218 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.670 REMARK 200 RESOLUTION RANGE LOW (A) : 59.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 5.600 REMARK 200 R MERGE (I) : 0.09300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.67 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.70 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6H1U REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.46 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MES PH 6, 0.2 M MGCL2, 10 MM REMARK 280 SODIUM GLUTAMATE, 20% PEG 6000, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 23.88000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 43.82000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.53500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 43.82000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 23.88000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.53500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12630 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O PRO A 45 O HOH A 501 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 504 O HOH A 648 4545 1.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 62 106.32 -54.10 REMARK 500 SER A 63 79.79 62.85 REMARK 500 GLN A 64 -65.06 -103.47 REMARK 500 LEU A 98 -172.88 -170.57 REMARK 500 LEU A 104 -12.45 78.30 REMARK 500 LYS A 161 74.25 -156.36 REMARK 500 THR A 162 49.09 34.57 REMARK 500 ALA A 272 127.99 -179.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GLU A 401 DBREF 6H2T A 41 328 UNP P96257 P96257_MYCTU 41 328 SEQRES 1 A 288 PRO LEU PRO THR PRO VAL GLY MET GLU ILE MET PRO PRO SEQRES 2 A 288 GLN PRO PRO LEU PRO PRO ASP SER SER SER GLN ASP CYS SEQRES 3 A 288 ASP PRO THR ALA SER LEU ARG PRO PHE ALA THR LYS ALA SEQRES 4 A 288 GLU ALA ASP ALA ALA VAL ALA ASP ILE ARG ALA ARG GLY SEQRES 5 A 288 ARG LEU ILE VAL GLY LEU ASP ILE GLY SER ASN LEU PHE SEQRES 6 A 288 SER PHE ARG ASP PRO ILE THR GLY GLU ILE THR GLY PHE SEQRES 7 A 288 ASP VAL ASP ILE ALA GLY GLU VAL ALA ARG ASP ILE PHE SEQRES 8 A 288 GLY VAL PRO SER HIS VAL GLU TYR ARG ILE LEU SER ALA SEQRES 9 A 288 ALA GLU ARG VAL THR ALA LEU GLN LYS SER GLN VAL ASP SEQRES 10 A 288 ILE VAL VAL LYS THR MET SER ILE THR CYS GLU ARG ARG SEQRES 11 A 288 LYS LEU VAL ASN PHE SER THR VAL TYR LEU ASP ALA ASN SEQRES 12 A 288 GLN ARG ILE LEU ALA PRO ARG ASP SER PRO ILE THR LYS SEQRES 13 A 288 VAL SER ASP LEU SER GLY LYS ARG VAL CYS VAL ALA ARG SEQRES 14 A 288 GLY THR THR SER LEU ARG ARG ILE ARG GLU ILE ALA PRO SEQRES 15 A 288 PRO PRO VAL ILE VAL SER VAL VAL ASN TRP ALA ASP CYS SEQRES 16 A 288 LEU VAL ALA LEU GLN GLN ARG GLU ILE ASP ALA VAL SER SEQRES 17 A 288 THR ASP ASP THR ILE LEU ALA GLY LEU VAL GLU GLU ASP SEQRES 18 A 288 PRO TYR LEU HIS ILE VAL GLY PRO ASP MET ALA ASP GLN SEQRES 19 A 288 PRO TYR GLY VAL GLY ILE ASN LEU ASP ASN THR GLY LEU SEQRES 20 A 288 VAL ARG PHE VAL ASN GLY THR LEU GLU ARG ILE ARG ASN SEQRES 21 A 288 ASP GLY THR TRP ASN THR LEU TYR ARG LYS TRP LEU THR SEQRES 22 A 288 VAL LEU GLY PRO ALA PRO ALA PRO PRO THR PRO ARG TYR SEQRES 23 A 288 VAL ASP HET GLU A 401 10 HETNAM GLU GLUTAMIC ACID FORMUL 2 GLU C5 H9 N O4 FORMUL 3 HOH *307(H2 O) HELIX 1 AA1 THR A 77 VAL A 85 1 9 HELIX 2 AA2 VAL A 85 GLY A 92 1 8 HELIX 3 AA3 GLY A 117 GLY A 132 1 16 HELIX 4 AA4 SER A 143 ALA A 145 5 3 HELIX 5 AA5 GLU A 146 LYS A 153 1 8 HELIX 6 AA6 THR A 166 LYS A 171 1 6 HELIX 7 AA7 LYS A 196 SER A 201 5 6 HELIX 8 AA8 THR A 211 ARG A 218 1 8 HELIX 9 AA9 ASN A 231 GLN A 241 1 11 HELIX 10 AB1 ASP A 251 ASP A 261 1 11 HELIX 11 AB2 ASN A 284 ASP A 301 1 18 HELIX 12 AB3 GLY A 302 LEU A 312 1 11 HELIX 13 AB4 THR A 313 GLY A 316 5 4 SHEET 1 AA1 6 GLU A 49 ILE A 50 0 SHEET 2 AA1 6 VAL A 225 VAL A 229 -1 O SER A 228 N GLU A 49 SHEET 3 AA1 6 ARG A 204 ALA A 208 1 N VAL A 205 O VAL A 225 SHEET 4 AA1 6 ALA A 246 ASP A 250 1 O ALA A 246 N CYS A 206 SHEET 5 AA1 6 LEU A 180 PRO A 189 -1 N LEU A 187 O VAL A 247 SHEET 6 AA1 6 LEU A 264 VAL A 267 -1 O VAL A 267 N ILE A 186 SHEET 1 AA2 6 GLU A 49 ILE A 50 0 SHEET 2 AA2 6 VAL A 225 VAL A 229 -1 O SER A 228 N GLU A 49 SHEET 3 AA2 6 ARG A 204 ALA A 208 1 N VAL A 205 O VAL A 225 SHEET 4 AA2 6 ALA A 246 ASP A 250 1 O ALA A 246 N CYS A 206 SHEET 5 AA2 6 LEU A 180 PRO A 189 -1 N LEU A 187 O VAL A 247 SHEET 6 AA2 6 ASP A 273 TYR A 276 -1 O TYR A 276 N LEU A 180 SHEET 1 AA3 2 ALA A 70 SER A 71 0 SHEET 2 AA3 2 ARG A 325 TYR A 326 1 O ARG A 325 N SER A 71 SHEET 1 AA4 5 VAL A 137 ILE A 141 0 SHEET 2 AA4 5 LEU A 94 LEU A 98 1 N VAL A 96 O GLU A 138 SHEET 3 AA4 5 ILE A 158 VAL A 159 1 O ILE A 158 N GLY A 97 SHEET 4 AA4 5 GLY A 279 ASN A 281 -1 O GLY A 279 N VAL A 159 SHEET 5 AA4 5 VAL A 173 PHE A 175 -1 N ASN A 174 O ILE A 280 SHEET 1 AA5 3 GLY A 101 SER A 102 0 SHEET 2 AA5 3 SER A 106 ARG A 108 -1 O SER A 106 N SER A 102 SHEET 3 AA5 3 ILE A 115 THR A 116 -1 O THR A 116 N PHE A 107 SSBOND 1 CYS A 66 CYS A 167 1555 1555 2.03 SSBOND 2 CYS A 206 CYS A 235 1555 1555 2.10 CISPEP 1 ALA A 221 PRO A 222 0 -6.45 SITE 1 AC1 13 ARG A 147 THR A 162 SER A 164 ARG A 169 SITE 2 AC1 13 THR A 211 THR A 212 SER A 213 TRP A 232 SITE 3 AC1 13 THR A 249 ASP A 250 ILE A 253 GLN A 274 SITE 4 AC1 13 HOH A 558 CRYST1 47.760 81.070 87.640 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020938 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012335 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011410 0.00000