HEADER TRANSFERASE 01-SEP-16 5T6K TITLE CRYSTAL STRUCTURE OF TGCDPK1 FROM TOXOPLASMA GONDII COMPLEXED WITH TITLE 2 GW780159X COMPND MOL_ID: 1; COMPND 2 MOLECULE: CALMODULIN-DOMAIN PROTEIN KINASE 1; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TOXOPLASMA GONDII; SOURCE 3 ORGANISM_TAXID: 5811; SOURCE 4 GENE: CDPK1; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET15_MHL KEYWDS STRUCTURAL GENOMICS CONSORTIUM, SGC, CDPKS, SERINE/THREONINE PROTEIN KEYWDS 2 KINASE, NUCLEOTIDE-BINDING, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR D.Q.JIANG,W.TEMPEL,J.R.WALKER,M.EL BAKKOURI,P.LOPPNAU,S.GRASLUND, AUTHOR 2 C.H.ARROWSMITH,A.M.EDWARDS,C.BOUNTRA,R.HUI,D.V.LOVATO,K.T.OSMAN, AUTHOR 3 STRUCTURAL GENOMICS CONSORTIUM (SGC) REVDAT 2 04-OCT-23 5T6K 1 REMARK REVDAT 1 02-NOV-16 5T6K 0 JRNL AUTH D.Q.JIANG,W.TEMPEL,J.R.WALKER,M.EL BAKKOURI,P.LOPPNAU, JRNL AUTH 2 S.GRASLUND,C.H.ARROWSMITH,A.M.EDWARDS,C.BOUNTRA,R.HUI, JRNL AUTH 3 D.V.LOVATO,K.T.OSMAN JRNL TITL CRYSTAL STRUCTURE OF CDPK1 FROM TOXOPLASMA GONDII COMPLEXED JRNL TITL 2 WITH SGC-1-19 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.2 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.64 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 17254 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.930 REMARK 3 FREE R VALUE TEST SET COUNT : 850 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 9 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.54 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.25 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2673 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2279 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2543 REMARK 3 BIN R VALUE (WORKING SET) : 0.2254 REMARK 3 BIN FREE R VALUE : 0.2796 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.86 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 130 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3262 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 30 REMARK 3 SOLVENT ATOMS : 41 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 67.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 75.51 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 7.88650 REMARK 3 B22 (A**2) : -0.11390 REMARK 3 B33 (A**2) : -7.77270 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.14700 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.323 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.423 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.253 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.938 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.914 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 6377 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 11462 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1388 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 83 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 1003 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 6377 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 453 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 6743 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 0.95 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.77 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 15.66 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: {A|44 - 75} REMARK 3 ORIGIN FOR THE GROUP (A): 2.8507 -10.0255 41.6333 REMARK 3 T TENSOR REMARK 3 T11: -0.0567 T22: -0.0616 REMARK 3 T33: 0.1208 T12: -0.0416 REMARK 3 T13: -0.0945 T23: 0.1166 REMARK 3 L TENSOR REMARK 3 L11: 3.4161 L22: 3.4189 REMARK 3 L33: 1.6718 L12: 1.2909 REMARK 3 L13: 0.4327 L23: 0.6537 REMARK 3 S TENSOR REMARK 3 S11: -0.0159 S12: 0.0447 S13: 0.1051 REMARK 3 S21: 0.0784 S22: 0.0228 S23: -0.1074 REMARK 3 S31: -0.0423 S32: 0.0502 S33: -0.0070 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: {A|76 - 213} REMARK 3 ORIGIN FOR THE GROUP (A): -4.5221 -7.3317 26.9497 REMARK 3 T TENSOR REMARK 3 T11: -0.0987 T22: -0.0937 REMARK 3 T33: 0.0559 T12: 0.0301 REMARK 3 T13: 0.0419 T23: 0.0591 REMARK 3 L TENSOR REMARK 3 L11: 1.9984 L22: 4.0466 REMARK 3 L33: 4.0318 L12: -0.3063 REMARK 3 L13: 0.4707 L23: -2.7001 REMARK 3 S TENSOR REMARK 3 S11: 0.0509 S12: -0.0251 S13: -0.0647 REMARK 3 S21: -0.0727 S22: -0.3433 S23: -0.3239 REMARK 3 S31: 0.3101 S32: 0.2561 S33: 0.2924 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: {A|214 - 364} REMARK 3 ORIGIN FOR THE GROUP (A): -1.6500 1.9235 13.2980 REMARK 3 T TENSOR REMARK 3 T11: -0.0942 T22: -0.0312 REMARK 3 T33: -0.0782 T12: 0.0897 REMARK 3 T13: 0.0653 T23: 0.0479 REMARK 3 L TENSOR REMARK 3 L11: 1.3460 L22: 2.4025 REMARK 3 L33: 3.1125 L12: 0.0842 REMARK 3 L13: 1.1141 L23: -0.2333 REMARK 3 S TENSOR REMARK 3 S11: -0.0166 S12: 0.3323 S13: -0.0261 REMARK 3 S21: -0.4329 S22: -0.1539 S23: -0.0441 REMARK 3 S31: 0.4098 S32: 0.3169 S33: 0.1705 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: {A|365 - 440} REMARK 3 ORIGIN FOR THE GROUP (A): 19.2482 7.0656 50.8472 REMARK 3 T TENSOR REMARK 3 T11: 0.1387 T22: -0.1654 REMARK 3 T33: -0.3068 T12: 0.0076 REMARK 3 T13: -0.0857 T23: 0.0094 REMARK 3 L TENSOR REMARK 3 L11: 1.2123 L22: 0.1208 REMARK 3 L33: 0.1840 L12: -0.3181 REMARK 3 L13: -0.4719 L23: -0.2253 REMARK 3 S TENSOR REMARK 3 S11: 0.0162 S12: 0.0250 S13: 0.0422 REMARK 3 S21: 0.0974 S22: -0.0436 S23: -0.0027 REMARK 3 S31: -0.0377 S32: 0.0028 S33: 0.0275 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: {A|441 - 507} REMARK 3 ORIGIN FOR THE GROUP (A): 17.6690 15.5923 21.1649 REMARK 3 T TENSOR REMARK 3 T11: -0.3006 T22: -0.1664 REMARK 3 T33: -0.1081 T12: 0.0382 REMARK 3 T13: 0.0048 T23: 0.1320 REMARK 3 L TENSOR REMARK 3 L11: 7.0843 L22: 3.0132 REMARK 3 L33: 5.0045 L12: -2.5383 REMARK 3 L13: -2.4016 L23: 1.4403 REMARK 3 S TENSOR REMARK 3 S11: 0.0565 S12: 0.0404 S13: 0.1716 REMARK 3 S21: 0.0695 S22: 0.1819 S23: 0.0880 REMARK 3 S31: -0.2471 S32: -0.1687 S33: -0.2384 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THIS STRUCTURE MODEL WAS REFINED AND REMARK 3 ADJUSTED USING 3KU2, A STRUCTURE MODEL OF THE SAME PROTEIN REMARK 3 COMPLEXED WITH ANP, AS A TEMPLATE. THERE ARE REMARK 3 GAPS IN THE PROTEIN CHAIN AND POORLY RESOLVED LOOPS WHICH REMARK 3 ARE EASY TO MISINTERPRET. WHOEVER ANALYZES THE STRUCTURE NEEDS REMARK 3 TO CONSIDER THE RISK OF OUT-OF-REGISTER ERRORS UNDER THESE REMARK 3 CIRCUMSTANCES, AND IS RECOMMENDED TO REFER TO THE ELECTRON REMARK 3 DENSITY MAP FOR MODEL CREDIBILITY. REMARK 4 REMARK 4 5T6K COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-SEP-16. REMARK 100 THE DEPOSITION ID IS D_1000223812. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-JUL-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97921 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.15 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17270 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 72.460 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.05100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.4 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : 0.74500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 3KU2 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 35.16 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, DI SODIUM-TART, PH 7.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 36.22800 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 SER A -10 REMARK 465 SER A -9 REMARK 465 GLY A -8 REMARK 465 ARG A -7 REMARK 465 GLU A -6 REMARK 465 ASN A -5 REMARK 465 LEU A -4 REMARK 465 TYR A -3 REMARK 465 PHE A -2 REMARK 465 GLN A -1 REMARK 465 GLY A 0 REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 GLN A 3 REMARK 465 GLN A 4 REMARK 465 GLU A 5 REMARK 465 SER A 6 REMARK 465 THR A 7 REMARK 465 LEU A 8 REMARK 465 GLY A 9 REMARK 465 GLY A 10 REMARK 465 ALA A 11 REMARK 465 ALA A 12 REMARK 465 GLY A 13 REMARK 465 GLU A 14 REMARK 465 PRO A 15 REMARK 465 ARG A 16 REMARK 465 SER A 17 REMARK 465 ARG A 18 REMARK 465 GLY A 19 REMARK 465 HIS A 20 REMARK 465 ALA A 21 REMARK 465 ALA A 22 REMARK 465 GLY A 23 REMARK 465 THR A 24 REMARK 465 SER A 25 REMARK 465 GLY A 26 REMARK 465 GLY A 27 REMARK 465 PRO A 28 REMARK 465 GLY A 29 REMARK 465 ASP A 30 REMARK 465 HIS A 31 REMARK 465 LEU A 32 REMARK 465 HIS A 33 REMARK 465 ALA A 34 REMARK 465 THR A 35 REMARK 465 PRO A 36 REMARK 465 GLY A 37 REMARK 465 MET A 38 REMARK 465 PHE A 39 REMARK 465 VAL A 40 REMARK 465 GLN A 41 REMARK 465 HIS A 42 REMARK 465 SER A 43 REMARK 465 SER A 205 REMARK 465 THR A 312 REMARK 465 LYS A 313 REMARK 465 GLU A 314 REMARK 465 GLN A 315 REMARK 465 ILE A 316 REMARK 465 SER A 317 REMARK 465 VAL A 318 REMARK 465 ASP A 319 REMARK 465 VAL A 320 REMARK 465 ASP A 372 REMARK 465 GLY A 373 REMARK 465 GLN A 374 REMARK 465 ARG A 389 REMARK 465 MET A 390 REMARK 465 LYS A 391 REMARK 465 GLY A 392 REMARK 465 GLN A 393 REMARK 465 ASP A 394 REMARK 465 ALA A 395 REMARK 465 SER A 396 REMARK 465 MET A 397 REMARK 465 ALA A 413 REMARK 465 VAL A 414 REMARK 465 ASP A 415 REMARK 465 PHE A 416 REMARK 465 ASP A 417 REMARK 465 LYS A 418 REMARK 465 ASN A 419 REMARK 465 GLY A 420 REMARK 465 TYR A 421 REMARK 465 ILE A 422 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 44 OG1 CG2 REMARK 470 ILE A 46 CD1 REMARK 470 SER A 48 OG REMARK 470 ARG A 55 CZ NH1 NH2 REMARK 470 VAL A 56 CG1 CG2 REMARK 470 LYS A 59 NZ REMARK 470 ILE A 66 CD1 REMARK 470 LYS A 80 NZ REMARK 470 SER A 83 OG REMARK 470 ARG A 85 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 88 CG CD CE NZ REMARK 470 LYS A 90 NZ REMARK 470 LYS A 93 CE NZ REMARK 470 SER A 95 OG REMARK 470 GLU A 119 CG CD OE1 OE2 REMARK 470 ARG A 143 CD NE CZ NH1 NH2 REMARK 470 LYS A 144 CG CD CE NZ REMARK 470 ARG A 145 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 156 NE CZ NH1 NH2 REMARK 470 LYS A 169 CD CE NZ REMARK 470 LYS A 185 CG CD CE NZ REMARK 470 LYS A 187 CD CE NZ REMARK 470 ILE A 191 CD1 REMARK 470 LEU A 198 CG CD1 CD2 REMARK 470 LYS A 206 NZ REMARK 470 LYS A 211 CD CE NZ REMARK 470 ILE A 212 CG1 CG2 CD1 REMARK 470 LYS A 260 CE NZ REMARK 470 LYS A 261 CD CE NZ REMARK 470 LYS A 264 CD CE NZ REMARK 470 LYS A 266 CG CD CE NZ REMARK 470 GLU A 270 CG CD OE1 OE2 REMARK 470 LYS A 275 CG CD CE NZ REMARK 470 LYS A 276 CD CE NZ REMARK 470 GLU A 279 CG CD OE1 OE2 REMARK 470 LYS A 282 CD CE NZ REMARK 470 LYS A 287 CD CE NZ REMARK 470 ARG A 300 NE CZ NH1 NH2 REMARK 470 ASP A 304 CG OD1 OD2 REMARK 470 ILE A 308 CG1 CG2 CD1 REMARK 470 LYS A 350 CD CE NZ REMARK 470 GLN A 354 CG CD OE1 NE2 REMARK 470 ASP A 355 OD1 OD2 REMARK 470 GLU A 356 CG CD OE1 OE2 REMARK 470 LYS A 358 NZ REMARK 470 ILE A 363 CG1 CG2 CD1 REMARK 470 PHE A 364 CG CD1 CD2 CE1 CE2 CZ REMARK 470 HIS A 365 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 366 CG CD CE NZ REMARK 470 LYS A 369 CE NZ REMARK 470 LEU A 375 CG CD1 CD2 REMARK 470 ASP A 376 CG OD1 OD2 REMARK 470 ARG A 377 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 379 CG CD OE1 OE2 REMARK 470 GLU A 382 CG CD OE1 OE2 REMARK 470 LYS A 385 CG CD CE NZ REMARK 470 MET A 388 SD CE REMARK 470 LEU A 398 CG CD1 CD2 REMARK 470 ASP A 399 CG OD1 OD2 REMARK 470 VAL A 403 CG1 CG2 REMARK 470 GLU A 406 CG CD OE1 OE2 REMARK 470 LEU A 411 CG CD1 CD2 REMARK 470 ASP A 412 CG OD1 OD2 REMARK 470 LYS A 435 CG CD CE NZ REMARK 470 THR A 436 OG1 CG2 REMARK 470 LEU A 438 CG CD1 CD2 REMARK 470 SER A 474 OG REMARK 470 GLU A 475 CG CD OE1 OE2 REMARK 470 LYS A 478 CD CE NZ REMARK 470 LYS A 486 CD CE NZ REMARK 470 ASN A 487 OD1 ND2 REMARK 470 ASP A 489 CG OD1 OD2 REMARK 470 GLN A 498 CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 62 -5.48 82.69 REMARK 500 ARG A 173 -36.24 84.44 REMARK 500 LYS A 211 -4.44 69.93 REMARK 500 GLU A 270 57.69 -103.70 REMARK 500 LEU A 289 40.59 -103.72 REMARK 500 LEU A 323 77.63 -110.01 REMARK 500 ASN A 487 46.30 -99.87 REMARK 500 ASP A 489 52.44 -111.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 5G9 A 601 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3KU2 RELATED DB: PDB REMARK 900 3KU2 CONTAINS THE SAME PROTEIN COMPLEXED WITH ANP REMARK 900 RELATED ID: 5T6A RELATED DB: PDB REMARK 900 RELATED ID: 5T6I RELATED DB: PDB DBREF 5T6K A 1 507 UNP Q9BJF5 Q9BJF5_TOXGO 1 507 SEQADV 5T6K MET A -17 UNP Q9BJF5 EXPRESSION TAG SEQADV 5T6K HIS A -16 UNP Q9BJF5 EXPRESSION TAG SEQADV 5T6K HIS A -15 UNP Q9BJF5 EXPRESSION TAG SEQADV 5T6K HIS A -14 UNP Q9BJF5 EXPRESSION TAG SEQADV 5T6K HIS A -13 UNP Q9BJF5 EXPRESSION TAG SEQADV 5T6K HIS A -12 UNP Q9BJF5 EXPRESSION TAG SEQADV 5T6K HIS A -11 UNP Q9BJF5 EXPRESSION TAG SEQADV 5T6K SER A -10 UNP Q9BJF5 EXPRESSION TAG SEQADV 5T6K SER A -9 UNP Q9BJF5 EXPRESSION TAG SEQADV 5T6K GLY A -8 UNP Q9BJF5 EXPRESSION TAG SEQADV 5T6K ARG A -7 UNP Q9BJF5 EXPRESSION TAG SEQADV 5T6K GLU A -6 UNP Q9BJF5 EXPRESSION TAG SEQADV 5T6K ASN A -5 UNP Q9BJF5 EXPRESSION TAG SEQADV 5T6K LEU A -4 UNP Q9BJF5 EXPRESSION TAG SEQADV 5T6K TYR A -3 UNP Q9BJF5 EXPRESSION TAG SEQADV 5T6K PHE A -2 UNP Q9BJF5 EXPRESSION TAG SEQADV 5T6K GLN A -1 UNP Q9BJF5 EXPRESSION TAG SEQADV 5T6K GLY A 0 UNP Q9BJF5 EXPRESSION TAG SEQRES 1 A 525 MET HIS HIS HIS HIS HIS HIS SER SER GLY ARG GLU ASN SEQRES 2 A 525 LEU TYR PHE GLN GLY MET GLY GLN GLN GLU SER THR LEU SEQRES 3 A 525 GLY GLY ALA ALA GLY GLU PRO ARG SER ARG GLY HIS ALA SEQRES 4 A 525 ALA GLY THR SER GLY GLY PRO GLY ASP HIS LEU HIS ALA SEQRES 5 A 525 THR PRO GLY MET PHE VAL GLN HIS SER THR ALA ILE PHE SEQRES 6 A 525 SER ASP ARG TYR LYS GLY GLN ARG VAL LEU GLY LYS GLY SEQRES 7 A 525 SER PHE GLY GLU VAL ILE LEU CYS LYS ASP LYS ILE THR SEQRES 8 A 525 GLY GLN GLU CYS ALA VAL LYS VAL ILE SER LYS ARG GLN SEQRES 9 A 525 VAL LYS GLN LYS THR ASP LYS GLU SER LEU LEU ARG GLU SEQRES 10 A 525 VAL GLN LEU LEU LYS GLN LEU ASP HIS PRO ASN ILE MET SEQRES 11 A 525 LYS LEU TYR GLU PHE PHE GLU ASP LYS GLY TYR PHE TYR SEQRES 12 A 525 LEU VAL GLY GLU VAL TYR THR GLY GLY GLU LEU PHE ASP SEQRES 13 A 525 GLU ILE ILE SER ARG LYS ARG PHE SER GLU VAL ASP ALA SEQRES 14 A 525 ALA ARG ILE ILE ARG GLN VAL LEU SER GLY ILE THR TYR SEQRES 15 A 525 MET HIS LYS ASN LYS ILE VAL HIS ARG ASP LEU LYS PRO SEQRES 16 A 525 GLU ASN LEU LEU LEU GLU SER LYS SER LYS ASP ALA ASN SEQRES 17 A 525 ILE ARG ILE ILE ASP PHE GLY LEU SER THR HIS PHE GLU SEQRES 18 A 525 ALA SER LYS LYS MET LYS ASP LYS ILE GLY THR ALA TYR SEQRES 19 A 525 TYR ILE ALA PRO GLU VAL LEU HIS GLY THR TYR ASP GLU SEQRES 20 A 525 LYS CYS ASP VAL TRP SER THR GLY VAL ILE LEU TYR ILE SEQRES 21 A 525 LEU LEU SER GLY CYS PRO PRO PHE ASN GLY ALA ASN GLU SEQRES 22 A 525 TYR ASP ILE LEU LYS LYS VAL GLU LYS GLY LYS TYR THR SEQRES 23 A 525 PHE GLU LEU PRO GLN TRP LYS LYS VAL SER GLU SER ALA SEQRES 24 A 525 LYS ASP LEU ILE ARG LYS MET LEU THR TYR VAL PRO SER SEQRES 25 A 525 MET ARG ILE SER ALA ARG ASP ALA LEU ASP HIS GLU TRP SEQRES 26 A 525 ILE GLN THR TYR THR LYS GLU GLN ILE SER VAL ASP VAL SEQRES 27 A 525 PRO SER LEU ASP ASN ALA ILE LEU ASN ILE ARG GLN PHE SEQRES 28 A 525 GLN GLY THR GLN LYS LEU ALA GLN ALA ALA LEU LEU TYR SEQRES 29 A 525 MET GLY SER LYS LEU THR SER GLN ASP GLU THR LYS GLU SEQRES 30 A 525 LEU THR ALA ILE PHE HIS LYS MET ASP LYS ASN GLY ASP SEQRES 31 A 525 GLY GLN LEU ASP ARG ALA GLU LEU ILE GLU GLY TYR LYS SEQRES 32 A 525 GLU LEU MET ARG MET LYS GLY GLN ASP ALA SER MET LEU SEQRES 33 A 525 ASP ALA SER ALA VAL GLU HIS GLU VAL ASP GLN VAL LEU SEQRES 34 A 525 ASP ALA VAL ASP PHE ASP LYS ASN GLY TYR ILE GLU TYR SEQRES 35 A 525 SER GLU PHE VAL THR VAL ALA MET ASP ARG LYS THR LEU SEQRES 36 A 525 LEU SER ARG GLU ARG LEU GLU ARG ALA PHE ARG MET PHE SEQRES 37 A 525 ASP SER ASP ASN SER GLY LYS ILE SER SER THR GLU LEU SEQRES 38 A 525 ALA THR ILE PHE GLY VAL SER ASP VAL ASP SER GLU THR SEQRES 39 A 525 TRP LYS SER VAL LEU SER GLU VAL ASP LYS ASN ASN ASP SEQRES 40 A 525 GLY GLU VAL ASP PHE ASP GLU PHE GLN GLN MET LEU LEU SEQRES 41 A 525 LYS LEU CYS GLY ASN HET 5G9 A 601 23 HET UNX A 602 1 HET UNX A 603 1 HET UNX A 604 1 HET UNX A 605 1 HET UNX A 606 1 HET UNX A 607 1 HET UNX A 608 1 HETNAM 5G9 4-(3-CHLOROPHENYL)-5-(1,5-NAPHTHYRIDIN-2-YL)-1,3- HETNAM 2 5G9 THIAZOL-2-AMINE HETNAM UNX UNKNOWN ATOM OR ION HETSYN 5G9 GW780159X FORMUL 2 5G9 C17 H11 CL N4 S FORMUL 3 UNX 7(X) FORMUL 10 HOH *41(H2 O) HELIX 1 AA1 ASP A 92 LEU A 106 1 15 HELIX 2 AA2 GLU A 135 ARG A 143 1 9 HELIX 3 AA3 SER A 147 ASN A 168 1 22 HELIX 4 AA4 LYS A 176 GLU A 178 5 3 HELIX 5 AA5 ALA A 219 GLY A 225 1 7 HELIX 6 AA6 LYS A 230 GLY A 246 1 17 HELIX 7 AA7 ASN A 254 GLY A 265 1 12 HELIX 8 AA8 LEU A 271 VAL A 277 5 7 HELIX 9 AA9 SER A 278 LEU A 289 1 12 HELIX 10 AB1 SER A 298 ASP A 304 1 7 HELIX 11 AB2 HIS A 305 TYR A 311 1 7 HELIX 12 AB3 LEU A 323 ASP A 368 1 46 HELIX 13 AB4 ASP A 376 MET A 388 1 13 HELIX 14 AB5 ASP A 399 ASP A 412 1 14 HELIX 15 AB6 TYR A 424 ASP A 451 1 28 HELIX 16 AB7 SER A 460 SER A 470 1 11 HELIX 17 AB8 ASP A 473 ASP A 485 1 13 HELIX 18 AB9 PHE A 494 LEU A 504 1 11 SHEET 1 AA1 5 TYR A 51 GLY A 60 0 SHEET 2 AA1 5 GLY A 63 ASP A 70 -1 O LEU A 67 N ARG A 55 SHEET 3 AA1 5 GLU A 76 SER A 83 -1 O CYS A 77 N CYS A 68 SHEET 4 AA1 5 TYR A 123 GLY A 128 -1 O GLY A 128 N ALA A 78 SHEET 5 AA1 5 LEU A 114 GLU A 119 -1 N PHE A 118 O TYR A 125 SHEET 1 AA2 2 LEU A 180 LEU A 182 0 SHEET 2 AA2 2 ILE A 191 ILE A 193 -1 O ARG A 192 N LEU A 181 SHEET 1 AA3 2 LYS A 457 SER A 459 0 SHEET 2 AA3 2 GLU A 491 ASP A 493 -1 O VAL A 492 N ILE A 458 SITE 1 AC1 12 GLY A 60 SER A 61 ALA A 78 LYS A 80 SITE 2 AC1 12 MET A 112 LEU A 126 GLU A 129 TYR A 131 SITE 3 AC1 12 ASN A 179 LEU A 181 ILE A 194 ASP A 195 CRYST1 47.960 72.456 65.671 90.00 98.22 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020851 0.000000 0.003012 0.00000 SCALE2 0.000000 0.013801 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015385 0.00000