HEADER SIGNALING PROTEIN 27-MAR-17 5NIY TITLE SIGNAL RECOGNITION PARTICLE-DOCKING PROTEIN FTSY COMPND MOL_ID: 1; COMPND 2 MOLECULE: SIGNAL RECOGNITION PARTICLE-DOCKING PROTEIN FTSY; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: BK350_09725, BK355_12030, BK400_00245; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SRP, GTPASE, NUCLEOTIDE, RECEPTOR, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR G.KEMPF,G.STJEPANOVIC,K.LAPOUGE,I.SINNING REVDAT 3 17-JAN-24 5NIY 1 REMARK REVDAT 2 14-NOV-18 5NIY 1 COMPND JRNL REVDAT 1 10-OCT-18 5NIY 0 JRNL AUTH G.KEMPF,G.STJEPANOVIC,J.SLOAN,A.HENDRICKS,K.LAPOUGE, JRNL AUTH 2 I.SINNING JRNL TITL THE ESCHERICHIA COLI SRP RECEPTOR FORMS A HOMODIMER AT THE JRNL TITL 2 MEMBRANE. JRNL REF STRUCTURE V. 26 1440 2018 JRNL REFN ISSN 1878-4186 JRNL PMID 30146170 JRNL DOI 10.1016/J.STR.2018.07.008 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.65 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 33646 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.168 REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.195 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1683 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.6664 - 3.8914 1.00 2718 152 0.1428 0.1387 REMARK 3 2 3.8914 - 3.0889 1.00 2680 131 0.1505 0.1883 REMARK 3 3 3.0889 - 2.6985 1.00 2688 121 0.1722 0.2106 REMARK 3 4 2.6985 - 2.4518 1.00 2685 139 0.1721 0.1905 REMARK 3 5 2.4518 - 2.2761 1.00 2648 151 0.1755 0.2111 REMARK 3 6 2.2761 - 2.1419 1.00 2634 158 0.1769 0.2215 REMARK 3 7 2.1419 - 2.0346 1.00 2639 132 0.1824 0.2380 REMARK 3 8 2.0346 - 1.9460 1.00 2673 151 0.1884 0.2404 REMARK 3 9 1.9460 - 1.8711 1.00 2668 136 0.1947 0.2496 REMARK 3 10 1.8711 - 1.8065 1.00 2615 138 0.1944 0.2182 REMARK 3 11 1.8065 - 1.7501 1.00 2669 140 0.2087 0.2597 REMARK 3 12 1.7501 - 1.7000 1.00 2646 134 0.2270 0.2799 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.990 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 2398 REMARK 3 ANGLE : 0.813 3243 REMARK 3 CHIRALITY : 0.051 378 REMARK 3 PLANARITY : 0.004 416 REMARK 3 DIHEDRAL : 16.252 1472 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 197 THROUGH 224 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.2909 -27.9784 20.6356 REMARK 3 T TENSOR REMARK 3 T11: 0.1951 T22: 0.3937 REMARK 3 T33: 0.2687 T12: -0.0748 REMARK 3 T13: -0.0382 T23: 0.0877 REMARK 3 L TENSOR REMARK 3 L11: 3.5468 L22: 6.7384 REMARK 3 L33: 4.0258 L12: 1.2095 REMARK 3 L13: -0.2095 L23: -0.4839 REMARK 3 S TENSOR REMARK 3 S11: -0.0930 S12: 0.1253 S13: 0.3313 REMARK 3 S21: -0.4015 S22: 0.1930 S23: 0.8895 REMARK 3 S31: 0.1333 S32: -0.7226 S33: -0.0613 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 225 THROUGH 241 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.7053 -34.1224 11.5334 REMARK 3 T TENSOR REMARK 3 T11: 0.2783 T22: 0.1706 REMARK 3 T33: 0.1545 T12: -0.0339 REMARK 3 T13: 0.0113 T23: -0.0484 REMARK 3 L TENSOR REMARK 3 L11: 5.1065 L22: 2.6691 REMARK 3 L33: 7.9740 L12: 0.6851 REMARK 3 L13: 0.9308 L23: -4.3270 REMARK 3 S TENSOR REMARK 3 S11: -0.0398 S12: -0.0318 S13: -0.1416 REMARK 3 S21: -0.2452 S22: -0.0216 S23: 0.0034 REMARK 3 S31: 0.4373 S32: -0.3767 S33: 0.0638 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 242 THROUGH 263 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.7438 -37.2993 19.4052 REMARK 3 T TENSOR REMARK 3 T11: 0.2741 T22: 0.2129 REMARK 3 T33: 0.2547 T12: 0.0455 REMARK 3 T13: 0.0317 T23: -0.0515 REMARK 3 L TENSOR REMARK 3 L11: 6.3238 L22: 7.6735 REMARK 3 L33: 7.2176 L12: -0.2989 REMARK 3 L13: 1.0014 L23: -4.9418 REMARK 3 S TENSOR REMARK 3 S11: -0.0705 S12: -0.3321 S13: -0.5164 REMARK 3 S21: -0.2013 S22: -0.0249 S23: -0.6507 REMARK 3 S31: 0.7578 S32: 0.4397 S33: 0.1305 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 264 THROUGH 320 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.6350 -9.4105 20.3620 REMARK 3 T TENSOR REMARK 3 T11: 0.1244 T22: 0.1907 REMARK 3 T33: 0.1505 T12: 0.0029 REMARK 3 T13: -0.0097 T23: 0.0067 REMARK 3 L TENSOR REMARK 3 L11: 0.1911 L22: 3.1668 REMARK 3 L33: 0.5317 L12: 0.7879 REMARK 3 L13: -0.4201 L23: -0.5532 REMARK 3 S TENSOR REMARK 3 S11: -0.0238 S12: -0.0191 S13: -0.0228 REMARK 3 S21: 0.0021 S22: 0.0728 S23: 0.0266 REMARK 3 S31: 0.0811 S32: -0.1175 S33: -0.0695 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 321 THROUGH 346 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.0778 9.7356 10.0404 REMARK 3 T TENSOR REMARK 3 T11: 0.1429 T22: 0.2465 REMARK 3 T33: 0.2438 T12: 0.0365 REMARK 3 T13: 0.0098 T23: 0.0575 REMARK 3 L TENSOR REMARK 3 L11: 1.4719 L22: 2.2372 REMARK 3 L33: 3.9276 L12: -0.3572 REMARK 3 L13: -1.0052 L23: -0.2801 REMARK 3 S TENSOR REMARK 3 S11: 0.1745 S12: 0.2584 S13: 0.1054 REMARK 3 S21: -0.1909 S22: 0.0919 S23: 0.4058 REMARK 3 S31: -0.2206 S32: -0.6616 S33: -0.1464 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 347 THROUGH 389 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.4529 9.5777 8.9504 REMARK 3 T TENSOR REMARK 3 T11: 0.1724 T22: 0.1421 REMARK 3 T33: 0.1466 T12: -0.0042 REMARK 3 T13: 0.0273 T23: 0.0250 REMARK 3 L TENSOR REMARK 3 L11: 4.7240 L22: 2.8985 REMARK 3 L33: 3.8624 L12: 0.1642 REMARK 3 L13: 0.7456 L23: -1.0182 REMARK 3 S TENSOR REMARK 3 S11: -0.0349 S12: 0.4046 S13: 0.2333 REMARK 3 S21: -0.3483 S22: 0.0313 S23: -0.0543 REMARK 3 S31: -0.0927 S32: -0.0720 S33: 0.0076 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 390 THROUGH 453 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.1253 -6.1284 8.1106 REMARK 3 T TENSOR REMARK 3 T11: 0.2729 T22: 0.2108 REMARK 3 T33: 0.1698 T12: 0.0199 REMARK 3 T13: 0.0090 T23: -0.0278 REMARK 3 L TENSOR REMARK 3 L11: 3.1947 L22: 3.4759 REMARK 3 L33: 2.5353 L12: 1.9675 REMARK 3 L13: 1.0282 L23: -0.8367 REMARK 3 S TENSOR REMARK 3 S11: -0.0990 S12: 0.4363 S13: -0.1962 REMARK 3 S21: -0.7210 S22: 0.2425 S23: -0.1544 REMARK 3 S31: 0.4660 S32: 0.2006 S33: -0.1084 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 454 THROUGH 496 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.3796 -14.8414 20.8605 REMARK 3 T TENSOR REMARK 3 T11: 0.1367 T22: 0.1661 REMARK 3 T33: 0.1540 T12: -0.0131 REMARK 3 T13: -0.0321 T23: 0.0328 REMARK 3 L TENSOR REMARK 3 L11: 1.4237 L22: 4.7624 REMARK 3 L33: 1.6186 L12: 0.0111 REMARK 3 L13: -0.2108 L23: -0.5899 REMARK 3 S TENSOR REMARK 3 S11: -0.0515 S12: -0.0783 S13: 0.0648 REMARK 3 S21: -0.0160 S22: 0.2219 S23: 0.3735 REMARK 3 S31: 0.1799 S32: -0.2852 S33: -0.1519 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5NIY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-MAR-17. REMARK 100 THE DEPOSITION ID IS D_1200004164. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-FEB-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976251 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33675 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 47.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 5.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.73 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 5.70 REMARK 200 R MERGE FOR SHELL (I) : 0.46600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2YHS REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.34 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M AMMONIUM ACETATE, 0.1 M BIS-TRIS REMARK 280 PH 5.5, 17% W/V POLYETHYLENE GLYCOL 10,000, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 40.32000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 710 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13600 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -2.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 195 REMARK 465 PHE A 196 REMARK 465 ASP A 497 REMARK 465 HIS A 498 REMARK 465 HIS A 499 REMARK 465 HIS A 500 REMARK 465 HIS A 501 REMARK 465 HIS A 502 REMARK 465 HIS A 503 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O LEU A 204 O HOH A 701 1.86 REMARK 500 N GLU A 208 O HOH A 701 2.08 REMARK 500 O HOH A 833 O HOH A 892 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 956 O HOH A 972 1455 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 284 98.13 -160.65 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 986 DISTANCE = 6.01 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GNP A 601 DBREF1 5NIY A 196 497 UNP A0A1M2U897_ECOLX DBREF2 5NIY A A0A1M2U897 197 498 SEQADV 5NIY MET A 195 UNP A0A1M2U89 INITIATING METHIONINE SEQADV 5NIY HIS A 498 UNP A0A1M2U89 EXPRESSION TAG SEQADV 5NIY HIS A 499 UNP A0A1M2U89 EXPRESSION TAG SEQADV 5NIY HIS A 500 UNP A0A1M2U89 EXPRESSION TAG SEQADV 5NIY HIS A 501 UNP A0A1M2U89 EXPRESSION TAG SEQADV 5NIY HIS A 502 UNP A0A1M2U89 EXPRESSION TAG SEQADV 5NIY HIS A 503 UNP A0A1M2U89 EXPRESSION TAG SEQRES 1 A 309 MET PHE ALA ARG LEU LYS ARG SER LEU LEU LYS THR LYS SEQRES 2 A 309 GLU ASN LEU GLY SER GLY PHE ILE SER LEU PHE ARG GLY SEQRES 3 A 309 LYS LYS ILE ASP ASP ASP LEU PHE GLU GLU LEU GLU GLU SEQRES 4 A 309 GLN LEU LEU ILE ALA ASP VAL GLY VAL GLU THR THR ARG SEQRES 5 A 309 LYS ILE ILE THR ASN LEU THR GLU GLY ALA SER ARG LYS SEQRES 6 A 309 GLN LEU ARG ASP ALA GLU ALA LEU TYR GLY LEU LEU LYS SEQRES 7 A 309 GLU GLU MET GLY GLU ILE LEU ALA LYS VAL ASP GLU PRO SEQRES 8 A 309 LEU ASN VAL GLU GLY LYS ALA PRO PHE VAL ILE LEU MET SEQRES 9 A 309 VAL GLY VAL ASN GLY VAL GLY LYS THR THR THR ILE GLY SEQRES 10 A 309 LYS LEU ALA ARG GLN PHE GLU GLN GLN GLY LYS SER VAL SEQRES 11 A 309 MET LEU ALA ALA GLY ASP THR PHE ARG ALA ALA ALA VAL SEQRES 12 A 309 GLU GLN LEU GLN VAL TRP GLY GLN ARG ASN ASN ILE PRO SEQRES 13 A 309 VAL ILE ALA GLN HIS THR GLY ALA ASP SER ALA SER VAL SEQRES 14 A 309 ILE PHE ASP ALA ILE GLN ALA ALA LYS ALA ARG ASN ILE SEQRES 15 A 309 ASP VAL LEU ILE ALA ASP THR ALA GLY ARG LEU GLN ASN SEQRES 16 A 309 LYS SER HIS LEU MET GLU GLU LEU LYS LYS ILE VAL ARG SEQRES 17 A 309 VAL MET LYS LYS LEU ASP VAL GLU ALA PRO HIS GLU VAL SEQRES 18 A 309 MET LEU THR ILE ASP ALA SER THR GLY GLN ASN ALA VAL SEQRES 19 A 309 SER GLN ALA LYS LEU PHE HIS GLU ALA VAL GLY LEU THR SEQRES 20 A 309 GLY ILE THR LEU THR LYS LEU ASP GLY THR ALA LYS GLY SEQRES 21 A 309 GLY VAL ILE PHE SER VAL ALA ASP GLN PHE GLY ILE PRO SEQRES 22 A 309 ILE ARG TYR ILE GLY VAL GLY GLU ARG ILE GLU ASP LEU SEQRES 23 A 309 ARG PRO PHE LYS ALA ASP ASP PHE ILE GLU ALA LEU PHE SEQRES 24 A 309 ALA ARG GLU ASP HIS HIS HIS HIS HIS HIS HET GNP A 601 32 HETNAM GNP PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER FORMUL 2 GNP C10 H17 N6 O13 P3 FORMUL 3 HOH *286(H2 O) HELIX 1 AA1 ALA A 197 LEU A 203 1 7 HELIX 2 AA2 LYS A 205 ASN A 209 5 5 HELIX 3 AA3 LEU A 210 SER A 212 5 3 HELIX 4 AA4 GLY A 213 ARG A 219 1 7 HELIX 5 AA5 ASP A 224 ALA A 238 1 15 HELIX 6 AA6 GLY A 241 LYS A 259 1 19 HELIX 7 AA7 ASP A 263 GLU A 265 5 3 HELIX 8 AA8 ALA A 266 LYS A 281 1 16 HELIX 9 AA9 GLY A 305 GLN A 320 1 16 HELIX 10 AB1 ARG A 333 ASN A 347 1 15 HELIX 11 AB2 ASP A 359 ARG A 374 1 16 HELIX 12 AB3 ASN A 389 LYS A 405 1 17 HELIX 13 AB4 GLY A 424 VAL A 438 1 15 HELIX 14 AB5 GLY A 455 GLY A 465 1 11 HELIX 15 AB6 ARG A 476 GLU A 478 5 3 HELIX 16 AB7 LYS A 484 ALA A 494 1 11 SHEET 1 AA1 8 VAL A 351 ILE A 352 0 SHEET 2 AA1 8 VAL A 324 ALA A 327 1 N LEU A 326 O ILE A 352 SHEET 3 AA1 8 VAL A 378 ALA A 381 1 O ILE A 380 N MET A 325 SHEET 4 AA1 8 PHE A 294 VAL A 299 1 N ILE A 296 O ALA A 381 SHEET 5 AA1 8 GLU A 414 ASP A 420 1 O GLU A 414 N LEU A 297 SHEET 6 AA1 8 GLY A 442 THR A 446 1 O THR A 444 N LEU A 417 SHEET 7 AA1 8 ILE A 468 GLY A 472 1 O GLY A 472 N LEU A 445 SHEET 8 AA1 8 LEU A 480 PRO A 482 -1 O ARG A 481 N ILE A 471 CISPEP 1 ALA A 292 PRO A 293 0 -3.84 CISPEP 2 ALA A 411 PRO A 412 0 2.95 SITE 1 AC1 25 ASN A 302 GLY A 303 VAL A 304 GLY A 305 SITE 2 AC1 25 LYS A 306 THR A 307 THR A 308 ARG A 333 SITE 3 AC1 25 LYS A 405 THR A 446 LYS A 447 ASP A 449 SITE 4 AC1 25 GLY A 472 GLY A 474 GLU A 475 HOH A 728 SITE 5 AC1 25 HOH A 737 HOH A 739 HOH A 753 HOH A 756 SITE 6 AC1 25 HOH A 791 HOH A 800 HOH A 818 HOH A 863 SITE 7 AC1 25 HOH A 920 CRYST1 32.730 80.640 59.307 90.00 95.23 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.030553 0.000000 0.002797 0.00000 SCALE2 0.000000 0.012401 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016932 0.00000