HEADER PROTEIN BINDING 19-MAY-16 5K3L TITLE CRYSTAL STRUCTURE OF RETINOIC ACID RECEPTOR-RELATED ORPHAN RECEPTOR TITLE 2 (ROR) GAMMA LIGAND BINDING DOMAIN COMPLEX WITH 444 COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUCLEAR RECEPTOR ROR-GAMMA; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: LIGAND BINDING DOMAIN; COMPND 5 SYNONYM: NUCLEAR RECEPTOR RZR-GAMMA,NUCLEAR RECEPTOR SUBFAMILY 1 COMPND 6 GROUP F MEMBER 3,RAR-RELATED ORPHAN RECEPTOR C,RETINOID-RELATED COMPND 7 ORPHAN RECEPTOR-GAMMA; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: RORC, NR1F3, RORG, RZRG; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21-CODONPLUS(DE3)-RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28 KEYWDS DOUBLE HELIX, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR P.HUANG,F.RASTINEJAD REVDAT 2 06-MAR-24 5K3L 1 REMARK REVDAT 1 31-MAY-17 5K3L 0 JRNL AUTH J.LU,F.RASTINEJAD JRNL TITL CRYSTAL STRUCTURE OF RETINOIC ACID RECEPTOR-RELATED ORPHAN JRNL TITL 2 RECEPTOR (ROR) GAMMA LIGAND BINDING DOMAIN COMPLEX WITH 444 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : TWIN_LSQ_F REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.78 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.980 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 35103 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.242 REMARK 3 R VALUE (WORKING SET) : 0.239 REMARK 3 FREE R VALUE : 0.264 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 1780 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 34.6052 - 6.4550 0.94 2564 147 0.1649 0.1792 REMARK 3 2 6.4550 - 5.1289 0.95 2626 129 0.2290 0.2624 REMARK 3 3 5.1289 - 4.4821 0.94 2592 155 0.2082 0.2509 REMARK 3 4 4.4821 - 4.0730 0.95 2592 128 0.2254 0.2488 REMARK 3 5 4.0730 - 3.7815 0.94 2620 163 0.2384 0.2788 REMARK 3 6 3.7815 - 3.5588 0.95 2613 126 0.2747 0.2713 REMARK 3 7 3.5588 - 3.3807 0.95 2622 141 0.3260 0.3758 REMARK 3 8 3.3807 - 3.2337 0.95 2590 137 0.3348 0.3841 REMARK 3 9 3.2337 - 3.1093 0.95 2592 125 0.3643 0.4078 REMARK 3 10 3.1093 - 3.0020 0.95 2609 141 0.3539 0.3921 REMARK 3 11 3.0020 - 2.9082 0.95 2595 121 0.3629 0.4428 REMARK 3 12 2.9082 - 2.8251 0.90 2540 141 0.3622 0.3627 REMARK 3 13 2.8251 - 2.7508 0.79 2168 111 0.3742 0.3784 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 36.360 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 106.4 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: 0.5000 REMARK 3 OPERATOR: -H,-K,L REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 7665 REMARK 3 ANGLE : 0.653 10341 REMARK 3 CHIRALITY : 0.034 1115 REMARK 3 PLANARITY : 0.002 1302 REMARK 3 DIHEDRAL : 20.712 4583 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 265 THROUGH 900 ) REMARK 3 ORIGIN FOR THE GROUP (A): 74.9673 -20.6465 -8.6987 REMARK 3 T TENSOR REMARK 3 T11: 0.5249 T22: 0.8339 REMARK 3 T33: 0.7017 T12: -0.1262 REMARK 3 T13: 0.0061 T23: -0.0310 REMARK 3 L TENSOR REMARK 3 L11: 1.1577 L22: 2.1356 REMARK 3 L33: 2.0881 L12: 0.9309 REMARK 3 L13: -0.4082 L23: 0.1569 REMARK 3 S TENSOR REMARK 3 S11: -0.0237 S12: -0.2197 S13: 0.2909 REMARK 3 S21: 0.2455 S22: 0.0638 S23: 0.1855 REMARK 3 S31: 0.2054 S32: 0.5590 S33: -0.0025 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 265 THROUGH 900 ) REMARK 3 ORIGIN FOR THE GROUP (A): 54.5072 -48.9086 17.0509 REMARK 3 T TENSOR REMARK 3 T11: 0.7816 T22: 0.6030 REMARK 3 T33: 0.6473 T12: -0.0473 REMARK 3 T13: -0.0001 T23: 0.0101 REMARK 3 L TENSOR REMARK 3 L11: 1.1582 L22: 1.3418 REMARK 3 L33: 1.8464 L12: -0.3281 REMARK 3 L13: 0.0825 L23: 0.1211 REMARK 3 S TENSOR REMARK 3 S11: 0.0885 S12: -0.1466 S13: -0.0662 REMARK 3 S21: -0.2241 S22: 0.0608 S23: 0.1660 REMARK 3 S31: -0.2299 S32: 0.3040 S33: -0.1147 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 265 THROUGH 900 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.8787 -20.1649 7.4226 REMARK 3 T TENSOR REMARK 3 T11: 0.5998 T22: 0.7834 REMARK 3 T33: 0.6887 T12: 0.1020 REMARK 3 T13: 0.0087 T23: 0.0149 REMARK 3 L TENSOR REMARK 3 L11: 1.4490 L22: 2.3206 REMARK 3 L33: 2.0403 L12: -0.2093 REMARK 3 L13: -0.0311 L23: 0.0744 REMARK 3 S TENSOR REMARK 3 S11: 0.0206 S12: -0.0390 S13: 0.1406 REMARK 3 S21: -0.2862 S22: 0.0729 S23: -0.2431 REMARK 3 S31: 0.1285 S32: -0.5220 S33: -0.0981 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 265 THROUGH 900 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.5013 -48.9158 -18.0567 REMARK 3 T TENSOR REMARK 3 T11: 0.9447 T22: 0.5706 REMARK 3 T33: 0.6243 T12: 0.0318 REMARK 3 T13: 0.0211 T23: -0.0124 REMARK 3 L TENSOR REMARK 3 L11: 1.3276 L22: 1.6629 REMARK 3 L33: 1.4877 L12: 0.7834 REMARK 3 L13: 0.4234 L23: -0.3886 REMARK 3 S TENSOR REMARK 3 S11: 0.1221 S12: 0.2185 S13: -0.0252 REMARK 3 S21: 0.0655 S22: -0.0179 S23: -0.2383 REMARK 3 S31: -0.3597 S32: -0.2513 S33: -0.0577 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5K3L COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-MAY-16. REMARK 100 THE DEPOSITION ID IS D_1000221662. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-MAY-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35138 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.750 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : 4.400 REMARK 200 R MERGE (I) : 0.06300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 78.9 REMARK 200 DATA REDUNDANCY IN SHELL : 2.70 REMARK 200 R MERGE FOR SHELL (I) : 0.62400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.36 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.4M POTASSIUM SODIUM TARTRATE REMARK 280 TETRAHYDRATE, PH 8, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.09533 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 102.19067 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 261 REMARK 465 SER A 262 REMARK 465 HIS A 263 REMARK 465 MET A 264 REMARK 465 HIS A 490 REMARK 465 PRO A 491 REMARK 465 ILE A 492 REMARK 465 VAL A 493 REMARK 465 VAL A 494 REMARK 465 GLN A 495 REMARK 465 ALA A 496 REMARK 465 ALA A 497 REMARK 465 PHE A 498 REMARK 465 PRO A 499 REMARK 465 PRO A 500 REMARK 465 LEU A 501 REMARK 465 TYR A 502 REMARK 465 LYS A 503 REMARK 465 GLU A 504 REMARK 465 LEU A 505 REMARK 465 PHE A 506 REMARK 465 SER A 507 REMARK 465 GLY B 261 REMARK 465 SER B 262 REMARK 465 HIS B 263 REMARK 465 MET B 264 REMARK 465 PRO B 491 REMARK 465 ILE B 492 REMARK 465 VAL B 493 REMARK 465 VAL B 494 REMARK 465 GLN B 495 REMARK 465 ALA B 496 REMARK 465 ALA B 497 REMARK 465 PHE B 498 REMARK 465 PRO B 499 REMARK 465 PRO B 500 REMARK 465 LEU B 501 REMARK 465 TYR B 502 REMARK 465 LYS B 503 REMARK 465 GLU B 504 REMARK 465 LEU B 505 REMARK 465 PHE B 506 REMARK 465 SER B 507 REMARK 465 GLY C 261 REMARK 465 SER C 262 REMARK 465 HIS C 263 REMARK 465 MET C 264 REMARK 465 PRO C 491 REMARK 465 ILE C 492 REMARK 465 VAL C 493 REMARK 465 VAL C 494 REMARK 465 GLN C 495 REMARK 465 ALA C 496 REMARK 465 ALA C 497 REMARK 465 PHE C 498 REMARK 465 PRO C 499 REMARK 465 PRO C 500 REMARK 465 LEU C 501 REMARK 465 TYR C 502 REMARK 465 LYS C 503 REMARK 465 GLU C 504 REMARK 465 LEU C 505 REMARK 465 PHE C 506 REMARK 465 SER C 507 REMARK 465 GLY D 261 REMARK 465 SER D 262 REMARK 465 HIS D 263 REMARK 465 MET D 264 REMARK 465 PRO D 491 REMARK 465 ILE D 492 REMARK 465 VAL D 493 REMARK 465 VAL D 494 REMARK 465 GLN D 495 REMARK 465 ALA D 496 REMARK 465 ALA D 497 REMARK 465 PHE D 498 REMARK 465 PRO D 499 REMARK 465 PRO D 500 REMARK 465 LEU D 501 REMARK 465 TYR D 502 REMARK 465 LYS D 503 REMARK 465 GLU D 504 REMARK 465 LEU D 505 REMARK 465 PHE D 506 REMARK 465 SER D 507 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 285 93.85 -56.55 REMARK 500 PHE A 300 108.63 -47.07 REMARK 500 CYS A 393 66.06 -152.80 REMARK 500 LYS A 456 1.17 -69.62 REMARK 500 SER A 474 2.39 -63.61 REMARK 500 LEU A 475 -65.40 -94.57 REMARK 500 PHE A 486 -69.32 -109.20 REMARK 500 ASP B 348 31.47 -89.81 REMARK 500 ARG B 364 4.27 -67.23 REMARK 500 PHE B 388 36.93 -97.22 REMARK 500 CYS B 393 67.29 -152.32 REMARK 500 ILE B 426 92.38 -69.67 REMARK 500 GLU B 435 50.18 -96.90 REMARK 500 CYS C 285 84.60 -67.85 REMARK 500 ALA C 357 -36.83 -39.83 REMARK 500 ARG C 437 0.13 -66.33 REMARK 500 ASN D 298 90.09 -65.60 REMARK 500 GLU D 343 1.57 -65.77 REMARK 500 GLU D 435 55.56 -93.17 REMARK 500 PHE D 486 -76.78 -105.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 444 A 900 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 444 B 900 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 444 C 900 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 444 D 900 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5K3N RELATED DB: PDB REMARK 900 RELATED ID: 5K3M RELATED DB: PDB REMARK 900 RELATED ID: 5K38 RELATED DB: PDB DBREF 5K3L A 265 507 UNP P51449 RORG_HUMAN 244 486 DBREF 5K3L B 265 507 UNP P51449 RORG_HUMAN 244 486 DBREF 5K3L C 265 507 UNP P51449 RORG_HUMAN 244 486 DBREF 5K3L D 265 507 UNP P51449 RORG_HUMAN 244 486 SEQADV 5K3L GLY A 261 UNP P51449 EXPRESSION TAG SEQADV 5K3L SER A 262 UNP P51449 EXPRESSION TAG SEQADV 5K3L HIS A 263 UNP P51449 EXPRESSION TAG SEQADV 5K3L MET A 264 UNP P51449 EXPRESSION TAG SEQADV 5K3L GLY B 261 UNP P51449 EXPRESSION TAG SEQADV 5K3L SER B 262 UNP P51449 EXPRESSION TAG SEQADV 5K3L HIS B 263 UNP P51449 EXPRESSION TAG SEQADV 5K3L MET B 264 UNP P51449 EXPRESSION TAG SEQADV 5K3L GLY C 261 UNP P51449 EXPRESSION TAG SEQADV 5K3L SER C 262 UNP P51449 EXPRESSION TAG SEQADV 5K3L HIS C 263 UNP P51449 EXPRESSION TAG SEQADV 5K3L MET C 264 UNP P51449 EXPRESSION TAG SEQADV 5K3L GLY D 261 UNP P51449 EXPRESSION TAG SEQADV 5K3L SER D 262 UNP P51449 EXPRESSION TAG SEQADV 5K3L HIS D 263 UNP P51449 EXPRESSION TAG SEQADV 5K3L MET D 264 UNP P51449 EXPRESSION TAG SEQRES 1 A 247 GLY SER HIS MET ALA SER LEU THR GLU ILE GLU HIS LEU SEQRES 2 A 247 VAL GLN SER VAL CYS LYS SER TYR ARG GLU THR CYS GLN SEQRES 3 A 247 LEU ARG LEU GLU ASP LEU LEU ARG GLN ARG SER ASN ILE SEQRES 4 A 247 PHE SER ARG GLU GLU VAL THR GLY TYR GLN ARG LYS SER SEQRES 5 A 247 MET TRP GLU MET TRP GLU ARG CYS ALA HIS HIS LEU THR SEQRES 6 A 247 GLU ALA ILE GLN TYR VAL VAL GLU PHE ALA LYS ARG LEU SEQRES 7 A 247 SER GLY PHE MET GLU LEU CYS GLN ASN ASP GLN ILE VAL SEQRES 8 A 247 LEU LEU LYS ALA GLY ALA MET GLU VAL VAL LEU VAL ARG SEQRES 9 A 247 MET CYS ARG ALA TYR ASN ALA ASP ASN ARG THR VAL PHE SEQRES 10 A 247 PHE GLU GLY LYS TYR GLY GLY MET GLU LEU PHE ARG ALA SEQRES 11 A 247 LEU GLY CYS SER GLU LEU ILE SER SER ILE PHE ASP PHE SEQRES 12 A 247 SER HIS SER LEU SER ALA LEU HIS PHE SER GLU ASP GLU SEQRES 13 A 247 ILE ALA LEU TYR THR ALA LEU VAL LEU ILE ASN ALA HIS SEQRES 14 A 247 ARG PRO GLY LEU GLN GLU LYS ARG LYS VAL GLU GLN LEU SEQRES 15 A 247 GLN TYR ASN LEU GLU LEU ALA PHE HIS HIS HIS LEU CYS SEQRES 16 A 247 LYS THR HIS ARG GLN SER ILE LEU ALA LYS LEU PRO PRO SEQRES 17 A 247 LYS GLY LYS LEU ARG SER LEU CYS SER GLN HIS VAL GLU SEQRES 18 A 247 ARG LEU GLN ILE PHE GLN HIS LEU HIS PRO ILE VAL VAL SEQRES 19 A 247 GLN ALA ALA PHE PRO PRO LEU TYR LYS GLU LEU PHE SER SEQRES 1 B 247 GLY SER HIS MET ALA SER LEU THR GLU ILE GLU HIS LEU SEQRES 2 B 247 VAL GLN SER VAL CYS LYS SER TYR ARG GLU THR CYS GLN SEQRES 3 B 247 LEU ARG LEU GLU ASP LEU LEU ARG GLN ARG SER ASN ILE SEQRES 4 B 247 PHE SER ARG GLU GLU VAL THR GLY TYR GLN ARG LYS SER SEQRES 5 B 247 MET TRP GLU MET TRP GLU ARG CYS ALA HIS HIS LEU THR SEQRES 6 B 247 GLU ALA ILE GLN TYR VAL VAL GLU PHE ALA LYS ARG LEU SEQRES 7 B 247 SER GLY PHE MET GLU LEU CYS GLN ASN ASP GLN ILE VAL SEQRES 8 B 247 LEU LEU LYS ALA GLY ALA MET GLU VAL VAL LEU VAL ARG SEQRES 9 B 247 MET CYS ARG ALA TYR ASN ALA ASP ASN ARG THR VAL PHE SEQRES 10 B 247 PHE GLU GLY LYS TYR GLY GLY MET GLU LEU PHE ARG ALA SEQRES 11 B 247 LEU GLY CYS SER GLU LEU ILE SER SER ILE PHE ASP PHE SEQRES 12 B 247 SER HIS SER LEU SER ALA LEU HIS PHE SER GLU ASP GLU SEQRES 13 B 247 ILE ALA LEU TYR THR ALA LEU VAL LEU ILE ASN ALA HIS SEQRES 14 B 247 ARG PRO GLY LEU GLN GLU LYS ARG LYS VAL GLU GLN LEU SEQRES 15 B 247 GLN TYR ASN LEU GLU LEU ALA PHE HIS HIS HIS LEU CYS SEQRES 16 B 247 LYS THR HIS ARG GLN SER ILE LEU ALA LYS LEU PRO PRO SEQRES 17 B 247 LYS GLY LYS LEU ARG SER LEU CYS SER GLN HIS VAL GLU SEQRES 18 B 247 ARG LEU GLN ILE PHE GLN HIS LEU HIS PRO ILE VAL VAL SEQRES 19 B 247 GLN ALA ALA PHE PRO PRO LEU TYR LYS GLU LEU PHE SER SEQRES 1 C 247 GLY SER HIS MET ALA SER LEU THR GLU ILE GLU HIS LEU SEQRES 2 C 247 VAL GLN SER VAL CYS LYS SER TYR ARG GLU THR CYS GLN SEQRES 3 C 247 LEU ARG LEU GLU ASP LEU LEU ARG GLN ARG SER ASN ILE SEQRES 4 C 247 PHE SER ARG GLU GLU VAL THR GLY TYR GLN ARG LYS SER SEQRES 5 C 247 MET TRP GLU MET TRP GLU ARG CYS ALA HIS HIS LEU THR SEQRES 6 C 247 GLU ALA ILE GLN TYR VAL VAL GLU PHE ALA LYS ARG LEU SEQRES 7 C 247 SER GLY PHE MET GLU LEU CYS GLN ASN ASP GLN ILE VAL SEQRES 8 C 247 LEU LEU LYS ALA GLY ALA MET GLU VAL VAL LEU VAL ARG SEQRES 9 C 247 MET CYS ARG ALA TYR ASN ALA ASP ASN ARG THR VAL PHE SEQRES 10 C 247 PHE GLU GLY LYS TYR GLY GLY MET GLU LEU PHE ARG ALA SEQRES 11 C 247 LEU GLY CYS SER GLU LEU ILE SER SER ILE PHE ASP PHE SEQRES 12 C 247 SER HIS SER LEU SER ALA LEU HIS PHE SER GLU ASP GLU SEQRES 13 C 247 ILE ALA LEU TYR THR ALA LEU VAL LEU ILE ASN ALA HIS SEQRES 14 C 247 ARG PRO GLY LEU GLN GLU LYS ARG LYS VAL GLU GLN LEU SEQRES 15 C 247 GLN TYR ASN LEU GLU LEU ALA PHE HIS HIS HIS LEU CYS SEQRES 16 C 247 LYS THR HIS ARG GLN SER ILE LEU ALA LYS LEU PRO PRO SEQRES 17 C 247 LYS GLY LYS LEU ARG SER LEU CYS SER GLN HIS VAL GLU SEQRES 18 C 247 ARG LEU GLN ILE PHE GLN HIS LEU HIS PRO ILE VAL VAL SEQRES 19 C 247 GLN ALA ALA PHE PRO PRO LEU TYR LYS GLU LEU PHE SER SEQRES 1 D 247 GLY SER HIS MET ALA SER LEU THR GLU ILE GLU HIS LEU SEQRES 2 D 247 VAL GLN SER VAL CYS LYS SER TYR ARG GLU THR CYS GLN SEQRES 3 D 247 LEU ARG LEU GLU ASP LEU LEU ARG GLN ARG SER ASN ILE SEQRES 4 D 247 PHE SER ARG GLU GLU VAL THR GLY TYR GLN ARG LYS SER SEQRES 5 D 247 MET TRP GLU MET TRP GLU ARG CYS ALA HIS HIS LEU THR SEQRES 6 D 247 GLU ALA ILE GLN TYR VAL VAL GLU PHE ALA LYS ARG LEU SEQRES 7 D 247 SER GLY PHE MET GLU LEU CYS GLN ASN ASP GLN ILE VAL SEQRES 8 D 247 LEU LEU LYS ALA GLY ALA MET GLU VAL VAL LEU VAL ARG SEQRES 9 D 247 MET CYS ARG ALA TYR ASN ALA ASP ASN ARG THR VAL PHE SEQRES 10 D 247 PHE GLU GLY LYS TYR GLY GLY MET GLU LEU PHE ARG ALA SEQRES 11 D 247 LEU GLY CYS SER GLU LEU ILE SER SER ILE PHE ASP PHE SEQRES 12 D 247 SER HIS SER LEU SER ALA LEU HIS PHE SER GLU ASP GLU SEQRES 13 D 247 ILE ALA LEU TYR THR ALA LEU VAL LEU ILE ASN ALA HIS SEQRES 14 D 247 ARG PRO GLY LEU GLN GLU LYS ARG LYS VAL GLU GLN LEU SEQRES 15 D 247 GLN TYR ASN LEU GLU LEU ALA PHE HIS HIS HIS LEU CYS SEQRES 16 D 247 LYS THR HIS ARG GLN SER ILE LEU ALA LYS LEU PRO PRO SEQRES 17 D 247 LYS GLY LYS LEU ARG SER LEU CYS SER GLN HIS VAL GLU SEQRES 18 D 247 ARG LEU GLN ILE PHE GLN HIS LEU HIS PRO ILE VAL VAL SEQRES 19 D 247 GLN ALA ALA PHE PRO PRO LEU TYR LYS GLU LEU PHE SER HET 444 A 900 31 HET 444 B 900 31 HET 444 C 900 31 HET 444 D 900 31 HETNAM 444 N-(2,2,2-TRIFLUOROETHYL)-N-{4-[2,2,2-TRIFLUORO-1- HETNAM 2 444 HYDROXY-1-(TRIFLUOROMETHYL) HETNAM 3 444 ETHYL]PHENYL}BENZENESULFONAMIDE FORMUL 5 444 4(C17 H12 F9 N O3 S) FORMUL 9 HOH *2(H2 O) HELIX 1 AA1 SER A 266 CYS A 285 1 20 HELIX 2 AA2 ARG A 288 GLN A 295 1 8 HELIX 3 AA3 SER A 301 LYS A 311 1 11 HELIX 4 AA4 SER A 312 ARG A 337 1 26 HELIX 5 AA5 GLN A 346 MET A 365 1 20 HELIX 6 AA6 GLY A 384 ARG A 389 5 6 HELIX 7 AA7 CYS A 393 ALA A 409 1 17 HELIX 8 AA8 SER A 413 ILE A 426 1 14 HELIX 9 AA9 LYS A 436 LYS A 456 1 21 HELIX 10 AB1 SER A 461 LEU A 466 1 6 HELIX 11 AB2 PRO A 468 GLN A 487 1 20 HELIX 12 AB3 LEU B 267 THR B 284 1 18 HELIX 13 AB4 ARG B 288 ARG B 296 1 9 HELIX 14 AB5 SER B 301 LYS B 311 1 11 HELIX 15 AB6 SER B 312 ARG B 337 1 26 HELIX 16 AB7 GLN B 346 ARG B 364 1 19 HELIX 17 AB8 MET B 365 ARG B 367 5 3 HELIX 18 AB9 GLU B 386 GLY B 392 5 7 HELIX 19 AC1 CYS B 393 LEU B 410 1 18 HELIX 20 AC2 SER B 413 ILE B 426 1 14 HELIX 21 AC3 GLU B 435 LYS B 456 1 22 HELIX 22 AC4 ARG B 459 ALA B 464 5 6 HELIX 23 AC5 PRO B 468 ILE B 485 1 18 HELIX 24 AC6 SER C 266 THR C 284 1 19 HELIX 25 AC7 ARG C 288 ARG C 296 1 9 HELIX 26 AC8 SER C 301 LYS C 311 1 11 HELIX 27 AC9 SER C 312 LEU C 338 1 27 HELIX 28 AD1 CYS C 345 MET C 365 1 21 HELIX 29 AD2 GLY C 384 ARG C 389 5 6 HELIX 30 AD3 CYS C 393 ALA C 409 1 17 HELIX 31 AD4 SER C 413 ILE C 426 1 14 HELIX 32 AD5 GLU C 435 LYS C 456 1 22 HELIX 33 AD6 THR C 457 HIS C 458 5 2 HELIX 34 AD7 ARG C 459 GLN C 460 5 2 HELIX 35 AD8 SER C 461 LEU C 466 1 6 HELIX 36 AD9 PRO C 468 ILE C 485 1 18 HELIX 37 AE1 SER D 266 CYS D 285 1 20 HELIX 38 AE2 ARG D 288 GLN D 295 1 8 HELIX 39 AE3 SER D 301 LYS D 311 1 11 HELIX 40 AE4 SER D 312 LEU D 338 1 27 HELIX 41 AE5 CYS D 345 MET D 365 1 21 HELIX 42 AE6 GLY D 384 GLY D 392 5 9 HELIX 43 AE7 CYS D 393 ALA D 409 1 17 HELIX 44 AE8 SER D 413 ILE D 426 1 14 HELIX 45 AE9 GLU D 435 LYS D 456 1 22 HELIX 46 AF1 ARG D 459 ALA D 464 5 6 HELIX 47 AF2 PRO D 468 GLN D 487 1 20 SHEET 1 AA1 3 TYR A 369 ASN A 370 0 SHEET 2 AA1 3 THR A 375 PHE A 378 -1 O THR A 375 N ASN A 370 SHEET 3 AA1 3 LYS A 381 GLY A 383 -1 O LYS A 381 N PHE A 378 SHEET 1 AA2 3 TYR B 369 ASN B 370 0 SHEET 2 AA2 3 THR B 375 PHE B 378 -1 O THR B 375 N ASN B 370 SHEET 3 AA2 3 LYS B 381 GLY B 384 -1 O LYS B 381 N PHE B 378 SHEET 1 AA3 3 TYR C 369 ASN C 370 0 SHEET 2 AA3 3 THR C 375 PHE C 378 -1 O THR C 375 N ASN C 370 SHEET 3 AA3 3 LYS C 381 GLY C 383 -1 O LYS C 381 N PHE C 378 SHEET 1 AA4 3 TYR D 369 ASN D 370 0 SHEET 2 AA4 3 THR D 375 PHE D 378 -1 O THR D 375 N ASN D 370 SHEET 3 AA4 3 LYS D 381 GLY D 383 -1 O LYS D 381 N PHE D 378 SITE 1 AC1 11 TRP A 317 CYS A 320 HIS A 323 LEU A 324 SITE 2 AC1 11 ALA A 327 MET A 365 PHE A 377 PHE A 388 SITE 3 AC1 11 ILE A 400 HIS A 479 LEU A 483 SITE 1 AC2 12 GLN B 286 TRP B 317 CYS B 320 ALA B 321 SITE 2 AC2 12 HIS B 323 ALA B 327 MET B 365 PHE B 377 SITE 3 AC2 12 PHE B 388 ILE B 400 HIS B 479 LEU B 483 SITE 1 AC3 10 GLN C 286 TRP C 317 CYS C 320 HIS C 323 SITE 2 AC3 10 ALA C 327 MET C 365 PHE C 377 PHE C 378 SITE 3 AC3 10 PHE C 388 HIS C 479 SITE 1 AC4 10 TRP D 317 CYS D 320 HIS D 323 LEU D 324 SITE 2 AC4 10 ALA D 327 MET D 365 PHE D 377 ILE D 400 SITE 3 AC4 10 HIS D 479 LEU D 483 CRYST1 89.558 89.558 153.286 90.00 90.00 120.00 P 31 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011166 0.006447 0.000000 0.00000 SCALE2 0.000000 0.012893 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006524 0.00000