HEADER METAL BINDING PROTEIN 09-FEB-16 5I2O TITLE STRUCTURE OF EF-HAND CONTAINING PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: EF-HAND DOMAIN-CONTAINING PROTEIN D2; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 70-184; COMPND 5 SYNONYM: SWIPROSIN-1; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: EFHD2, SWS1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS CALCIUM BINDING PROTEIN, METAL BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR K.R.PARK,M.S.KWON,J.Y.AN,J.G.LEE,H.S.YOUN,Y.LEE,J.Y.KANG,T.G.KIM, AUTHOR 2 J.J.LIM,J.S.PARK,S.H.LEE,W.K.SONG,H.CHEONG,C.JUN,S.H.EOM REVDAT 2 08-NOV-23 5I2O 1 REMARK REVDAT 1 28-DEC-16 5I2O 0 JRNL AUTH K.R.PARK,M.S.KWON,J.Y.AN,J.G.LEE,H.S.YOUN,Y.LEE,J.Y.KANG, JRNL AUTH 2 T.G.KIM,J.J.LIM,J.S.PARK,S.H.LEE,W.K.SONG,H.K.CHEONG, JRNL AUTH 3 C.D.JUN,S.H.EOM JRNL TITL STRUCTURAL IMPLICATIONS OF CA(2+)-DEPENDENT ACTIN-BUNDLING JRNL TITL 2 FUNCTION OF HUMAN EFHD2/SWIPROSIN-1. JRNL REF SCI REP V. 6 39095 2016 JRNL REFN ESSN 2045-2322 JRNL PMID 27974828 JRNL DOI 10.1038/SREP39095 REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8_1069 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.14 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.8 REMARK 3 NUMBER OF REFLECTIONS : 7156 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.185 REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.204 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.560 REMARK 3 FREE R VALUE TEST SET COUNT : 326 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.1428 - 1.9800 1.00 3750 178 0.1778 0.2023 REMARK 3 2 1.9800 - 1.9517 0.86 3080 148 0.1612 0.2111 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.830 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.013 863 REMARK 3 ANGLE : 1.365 1149 REMARK 3 CHIRALITY : 0.096 122 REMARK 3 PLANARITY : 0.004 149 REMARK 3 DIHEDRAL : 15.933 337 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 80 THROUGH 85 ) REMARK 3 ORIGIN FOR THE GROUP (A): 52.9726 67.3919 6.7317 REMARK 3 T TENSOR REMARK 3 T11: 0.3271 T22: 0.2794 REMARK 3 T33: 0.5381 T12: -0.0230 REMARK 3 T13: -0.0532 T23: -0.0106 REMARK 3 L TENSOR REMARK 3 L11: 0.0917 L22: 0.0883 REMARK 3 L33: 0.0525 L12: -0.0003 REMARK 3 L13: -0.0650 L23: -0.0277 REMARK 3 S TENSOR REMARK 3 S11: -0.2197 S12: 0.3110 S13: 0.3054 REMARK 3 S21: -0.2583 S22: 0.2430 S23: -0.1091 REMARK 3 S31: 0.4185 S32: 0.2167 S33: 0.0005 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 86 THROUGH 104 ) REMARK 3 ORIGIN FOR THE GROUP (A): 57.9586 58.7851 7.5704 REMARK 3 T TENSOR REMARK 3 T11: 0.2638 T22: 0.2869 REMARK 3 T33: 0.2667 T12: -0.0701 REMARK 3 T13: -0.0073 T23: -0.0235 REMARK 3 L TENSOR REMARK 3 L11: 0.6731 L22: 0.3077 REMARK 3 L33: 0.1449 L12: 0.4031 REMARK 3 L13: 0.4471 L23: 0.2735 REMARK 3 S TENSOR REMARK 3 S11: -0.1639 S12: 0.2406 S13: -0.0142 REMARK 3 S21: 0.1810 S22: -0.0168 S23: -0.0858 REMARK 3 S31: -0.1288 S32: 0.1304 S33: 0.0002 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 105 THROUGH 113 ) REMARK 3 ORIGIN FOR THE GROUP (A): 54.361 55.852 -7.490 REMARK 3 T TENSOR REMARK 3 T11: 0.4138 T22: 0.5846 REMARK 3 T33: 0.3732 T12: -0.1883 REMARK 3 T13: 0.0427 T23: -0.0034 REMARK 3 L TENSOR REMARK 3 L11: 0.0451 L22: 0.0192 REMARK 3 L33: 0.0232 L12: -0.0496 REMARK 3 L13: -0.0351 L23: -0.0194 REMARK 3 S TENSOR REMARK 3 S11: -0.4458 S12: 1.1525 S13: 0.2772 REMARK 3 S21: -0.4806 S22: 0.2412 S23: -0.4969 REMARK 3 S31: -0.5820 S32: 0.8530 S33: -0.0121 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 114 THROUGH 129 ) REMARK 3 ORIGIN FOR THE GROUP (A): 54.8428 43.1152 -3.1436 REMARK 3 T TENSOR REMARK 3 T11: 0.3360 T22: 0.3510 REMARK 3 T33: 0.2860 T12: 0.0791 REMARK 3 T13: 0.0047 T23: -0.0453 REMARK 3 L TENSOR REMARK 3 L11: 0.0964 L22: 0.2422 REMARK 3 L33: 0.0461 L12: 0.1104 REMARK 3 L13: -0.0317 L23: -0.1766 REMARK 3 S TENSOR REMARK 3 S11: 0.1972 S12: 0.0053 S13: -0.0847 REMARK 3 S21: -0.4069 S22: -0.2753 S23: -0.0167 REMARK 3 S31: 0.5357 S32: 0.5837 S33: -0.0005 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 130 THROUGH 140 ) REMARK 3 ORIGIN FOR THE GROUP (A): 43.6825 46.1481 -2.9717 REMARK 3 T TENSOR REMARK 3 T11: 0.2480 T22: 0.2555 REMARK 3 T33: 0.2857 T12: 0.0157 REMARK 3 T13: -0.0364 T23: 0.0145 REMARK 3 L TENSOR REMARK 3 L11: 0.0397 L22: 0.0237 REMARK 3 L33: 0.1650 L12: 0.0921 REMARK 3 L13: 0.0824 L23: 0.0357 REMARK 3 S TENSOR REMARK 3 S11: 0.0205 S12: 0.0532 S13: -0.1844 REMARK 3 S21: -0.0673 S22: 0.0447 S23: 0.3960 REMARK 3 S31: 0.2186 S32: 0.1308 S33: 0.0010 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 141 THROUGH 149 ) REMARK 3 ORIGIN FOR THE GROUP (A): 43.9961 56.8926 -4.9247 REMARK 3 T TENSOR REMARK 3 T11: 0.2929 T22: 0.2745 REMARK 3 T33: 0.1914 T12: 0.0349 REMARK 3 T13: -0.0238 T23: -0.0198 REMARK 3 L TENSOR REMARK 3 L11: 0.0596 L22: 0.0644 REMARK 3 L33: 0.1079 L12: -0.0308 REMARK 3 L13: 0.0442 L23: -0.1731 REMARK 3 S TENSOR REMARK 3 S11: -0.1531 S12: -0.2998 S13: 0.0065 REMARK 3 S21: 0.0662 S22: 0.0199 S23: -0.0246 REMARK 3 S31: -0.7146 S32: -0.3780 S33: -0.0003 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 150 THROUGH 161 ) REMARK 3 ORIGIN FOR THE GROUP (A): 49.1802 56.4038 5.7083 REMARK 3 T TENSOR REMARK 3 T11: 0.2316 T22: 0.2286 REMARK 3 T33: 0.2384 T12: -0.0086 REMARK 3 T13: -0.0050 T23: -0.0184 REMARK 3 L TENSOR REMARK 3 L11: 0.0388 L22: 0.1007 REMARK 3 L33: 0.0322 L12: -0.0649 REMARK 3 L13: 0.0806 L23: 0.0013 REMARK 3 S TENSOR REMARK 3 S11: -0.0388 S12: 0.1280 S13: 0.1195 REMARK 3 S21: 0.0156 S22: 0.0932 S23: 0.2911 REMARK 3 S31: -0.3421 S32: -0.0851 S33: 0.0007 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 162 THROUGH 169 ) REMARK 3 ORIGIN FOR THE GROUP (A): 43.5146 45.4223 11.3963 REMARK 3 T TENSOR REMARK 3 T11: 0.2357 T22: 0.2857 REMARK 3 T33: 0.2933 T12: -0.0017 REMARK 3 T13: -0.0296 T23: 0.0311 REMARK 3 L TENSOR REMARK 3 L11: 0.1192 L22: 0.3197 REMARK 3 L33: 0.1542 L12: -0.0680 REMARK 3 L13: -0.0315 L23: 0.0001 REMARK 3 S TENSOR REMARK 3 S11: 0.1598 S12: -0.3607 S13: -0.0490 REMARK 3 S21: 0.4159 S22: 0.0162 S23: 0.0112 REMARK 3 S31: 0.4359 S32: -0.4044 S33: -0.0034 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 170 THROUGH 184 ) REMARK 3 ORIGIN FOR THE GROUP (A): 54.0981 47.2124 10.1300 REMARK 3 T TENSOR REMARK 3 T11: 0.3095 T22: 0.2807 REMARK 3 T33: 0.3031 T12: -0.0002 REMARK 3 T13: -0.0439 T23: 0.0102 REMARK 3 L TENSOR REMARK 3 L11: 0.0545 L22: 0.2140 REMARK 3 L33: 0.2427 L12: -0.0490 REMARK 3 L13: -0.0397 L23: -0.2582 REMARK 3 S TENSOR REMARK 3 S11: -0.1389 S12: -0.1954 S13: 0.1282 REMARK 3 S21: 0.3203 S22: -0.0507 S23: -0.2915 REMARK 3 S31: -0.3310 S32: 0.1063 S33: 0.0003 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5I2O COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 18-FEB-16. REMARK 100 THE DEPOSITION ID IS D_1000218157. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-APR-14 REMARK 200 TEMPERATURE (KELVIN) : 95 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 7A (6B, 6C1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 7706 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 10.60 REMARK 200 R MERGE (I) : 0.06200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.98 REMARK 200 COMPLETENESS FOR SHELL (%) : 78.7 REMARK 200 DATA REDUNDANCY IN SHELL : 7.70 REMARK 200 R MERGE FOR SHELL (I) : 0.38300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX 1.8_1069 REMARK 200 STARTING MODEL: 5I2L REMARK 200 REMARK 200 REMARK: ROD SHAPE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 33.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.84 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRIS-HCL, PH8.5, 32% PEG 2000, REMARK 280 VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 18.12700 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 26.78350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 25.76450 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 26.78350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 18.12700 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 25.76450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 65 REMARK 465 ALA A 66 REMARK 465 MET A 67 REMARK 465 GLY A 68 REMARK 465 SER A 69 REMARK 465 GLY A 70 REMARK 465 GLU A 71 REMARK 465 PRO A 72 REMARK 465 GLN A 73 REMARK 465 SER A 74 REMARK 465 PRO A 75 REMARK 465 SER A 76 REMARK 465 ARG A 77 REMARK 465 ARG A 78 REMARK 465 VAL A 79 REMARK 465 ALA A 106 REMARK 465 GLY A 107 REMARK 465 ARG A 108 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 86 66.63 -111.33 REMARK 500 ASP A 168 13.77 59.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 201 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 141 OD1 REMARK 620 2 ASP A 143 OD1 82.7 REMARK 620 3 ASP A 145 OD1 86.7 79.5 REMARK 620 4 LYS A 147 O 97.4 160.2 80.7 REMARK 620 5 GLU A 152 OE1 107.2 122.6 154.5 76.4 REMARK 620 6 GLU A 152 OE2 87.2 73.0 152.3 126.8 52.1 REMARK 620 7 HOH A 314 O 161.0 81.1 80.7 94.5 89.9 97.4 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5I2L RELATED DB: PDB REMARK 900 RELATED ID: 5I2Q RELATED DB: PDB DBREF 5I2O A 70 184 UNP Q96C19 EFHD2_HUMAN 70 184 SEQADV 5I2O GLY A 65 UNP Q96C19 EXPRESSION TAG SEQADV 5I2O ALA A 66 UNP Q96C19 EXPRESSION TAG SEQADV 5I2O MET A 67 UNP Q96C19 EXPRESSION TAG SEQADV 5I2O GLY A 68 UNP Q96C19 EXPRESSION TAG SEQADV 5I2O SER A 69 UNP Q96C19 EXPRESSION TAG SEQADV 5I2O ALA A 116 UNP Q96C19 GLU 116 ENGINEERED MUTATION SEQRES 1 A 120 GLY ALA MET GLY SER GLY GLU PRO GLN SER PRO SER ARG SEQRES 2 A 120 ARG VAL PHE ASN PRO TYR THR GLU PHE LYS GLU PHE SER SEQRES 3 A 120 ARG LYS GLN ILE LYS ASP MET GLU LYS MET PHE LYS GLN SEQRES 4 A 120 TYR ASP ALA GLY ARG ASP GLY PHE ILE ASP LEU MET ALA SEQRES 5 A 120 LEU LYS LEU MET MET GLU LYS LEU GLY ALA PRO GLN THR SEQRES 6 A 120 HIS LEU GLY LEU LYS ASN MET ILE LYS GLU VAL ASP GLU SEQRES 7 A 120 ASP PHE ASP SER LYS LEU SER PHE ARG GLU PHE LEU LEU SEQRES 8 A 120 ILE PHE ARG LYS ALA ALA ALA GLY GLU LEU GLN GLU ASP SEQRES 9 A 120 SER GLY LEU CYS VAL LEU ALA ARG LEU SER GLU ILE ASP SEQRES 10 A 120 VAL SER SER HET CA A 201 1 HETNAM CA CALCIUM ION FORMUL 2 CA CA 2+ FORMUL 3 HOH *35(H2 O) HELIX 1 AA1 ASN A 81 PHE A 86 1 6 HELIX 2 AA2 SER A 90 ASP A 105 1 16 HELIX 3 AA3 ASP A 113 LEU A 124 1 12 HELIX 4 AA4 THR A 129 ASP A 141 1 13 HELIX 5 AA5 SER A 149 ALA A 162 1 14 HELIX 6 AA6 SER A 169 SER A 178 1 10 LINK OD1 ASP A 141 CA CA A 201 1555 1555 2.28 LINK OD1 ASP A 143 CA CA A 201 1555 1555 2.33 LINK OD1 ASP A 145 CA CA A 201 1555 1555 2.39 LINK O LYS A 147 CA CA A 201 1555 1555 2.29 LINK OE1 GLU A 152 CA CA A 201 1555 1555 2.42 LINK OE2 GLU A 152 CA CA A 201 1555 1555 2.59 LINK CA CA A 201 O HOH A 314 1555 1555 2.37 SITE 1 AC1 6 ASP A 141 ASP A 143 ASP A 145 LYS A 147 SITE 2 AC1 6 GLU A 152 HOH A 314 CRYST1 36.254 51.529 53.567 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.027583 0.000000 0.000000 0.00000 SCALE2 0.000000 0.019407 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018668 0.00000