HEADER RNA BINDING PROTEIN/RNA 11-JUN-15 5BZ5 TITLE CRYSTAL STRUCTURE OF THE RNA-BINDING DOMAIN OF YEAST PUF5P BOUND TO TITLE 2 AMN1 RNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: SUPPRESSOR PROTEIN MPT5; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 201-600; COMPND 5 SYNONYM: PROTEIN HTR1,PUMILIO HOMOLOGY DOMAIN FAMILY MEMBER 5; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: RNA (5'-R(*UP*GP*UP*AP*AP*CP*UP*UP*UP*A)-3'); COMPND 9 CHAIN: B; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / SOURCE 3 S288C); SOURCE 4 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 5 ORGANISM_TAXID: 559292; SOURCE 6 STRAIN: ATCC 204508 / S288C; SOURCE 7 GENE: MPT5, HTR1, PUF5, YGL178W, BIC834; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 13 ORGANISM_TAXID: 32630 KEYWDS PUF RNA-BINDING DOMAIN, RNA BINDING PROTEIN-RNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR C.QIU,T.M.T.HALL REVDAT 3 06-MAR-24 5BZ5 1 REMARK REVDAT 2 30-SEP-15 5BZ5 1 JRNL REVDAT 1 23-SEP-15 5BZ5 0 JRNL AUTH D.WILINSKI,C.QIU,C.P.LAPOINTE,M.NEVIL,Z.T.CAMPBELL, JRNL AUTH 2 T.M.TANAKA HALL,M.WICKENS JRNL TITL RNA REGULATORY NETWORKS DIVERSIFIED THROUGH CURVATURE OF THE JRNL TITL 2 PUF PROTEIN SCAFFOLD. JRNL REF NAT COMMUN V. 6 8213 2015 JRNL REFN ESSN 2041-1723 JRNL PMID 26364903 JRNL DOI 10.1038/NCOMMS9213 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.2_1309 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.51 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.9 REMARK 3 NUMBER OF REFLECTIONS : 13471 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.201 REMARK 3 FREE R VALUE : 0.259 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1349 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.5124 - 6.0257 0.91 1297 146 0.1837 0.2122 REMARK 3 2 6.0257 - 4.7856 0.93 1238 137 0.2058 0.2427 REMARK 3 3 4.7856 - 4.1815 0.94 1218 135 0.1718 0.2540 REMARK 3 4 4.1815 - 3.7996 0.94 1211 135 0.1755 0.2585 REMARK 3 5 3.7996 - 3.5274 0.95 1216 135 0.2029 0.2507 REMARK 3 6 3.5274 - 3.3196 0.95 1206 134 0.2131 0.3035 REMARK 3 7 3.3196 - 3.1534 0.95 1212 134 0.2309 0.2864 REMARK 3 8 3.1534 - 3.0162 0.96 1203 134 0.2562 0.2883 REMARK 3 9 3.0162 - 2.9001 0.94 1194 134 0.2557 0.3415 REMARK 3 10 2.9001 - 2.8001 0.91 1127 125 0.2728 0.3196 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.300 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.200 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 53.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 67.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 3203 REMARK 3 ANGLE : 0.674 4371 REMARK 3 CHIRALITY : 0.046 535 REMARK 3 PLANARITY : 0.004 514 REMARK 3 DIHEDRAL : 12.563 1216 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 203 THROUGH 322 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.7353 31.1991 -22.9905 REMARK 3 T TENSOR REMARK 3 T11: 0.3220 T22: 0.4462 REMARK 3 T33: 0.2284 T12: 0.0593 REMARK 3 T13: 0.0091 T23: -0.0541 REMARK 3 L TENSOR REMARK 3 L11: 3.1742 L22: 3.0356 REMARK 3 L33: 7.0259 L12: 0.4404 REMARK 3 L13: 0.8542 L23: -0.9959 REMARK 3 S TENSOR REMARK 3 S11: -0.0028 S12: 0.7780 S13: 0.0293 REMARK 3 S21: -0.1870 S22: -0.1488 S23: 0.0519 REMARK 3 S31: -0.0430 S32: 0.2205 S33: 0.1634 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 323 THROUGH 600 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.3030 41.7707 20.7505 REMARK 3 T TENSOR REMARK 3 T11: 0.3752 T22: 0.3797 REMARK 3 T33: 0.2802 T12: -0.0564 REMARK 3 T13: 0.0334 T23: 0.0023 REMARK 3 L TENSOR REMARK 3 L11: 1.2548 L22: 4.1860 REMARK 3 L33: 4.6765 L12: -1.2935 REMARK 3 L13: -1.6602 L23: 3.1341 REMARK 3 S TENSOR REMARK 3 S11: -0.1671 S12: -0.1339 S13: 0.0168 REMARK 3 S21: 0.4680 S22: 0.1065 S23: 0.3096 REMARK 3 S31: 0.1627 S32: 0.1640 S33: 0.0528 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 12 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.1337 49.1758 3.2072 REMARK 3 T TENSOR REMARK 3 T11: 0.9703 T22: 0.7289 REMARK 3 T33: 0.4766 T12: -0.1427 REMARK 3 T13: 0.0946 T23: -0.0157 REMARK 3 L TENSOR REMARK 3 L11: 2.3155 L22: 0.8630 REMARK 3 L33: 0.4645 L12: 0.1778 REMARK 3 L13: 0.0500 L23: -0.6190 REMARK 3 S TENSOR REMARK 3 S11: 0.2603 S12: -0.3366 S13: -0.0997 REMARK 3 S21: -1.4858 S22: 0.0875 S23: -0.0837 REMARK 3 S31: -1.7272 S32: 1.2461 S33: -0.3724 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5BZ5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-JUN-15. REMARK 100 THE DEPOSITION ID IS D_1000210815. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-JUN-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.6 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13482 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.7 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : 0.09400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.7 REMARK 200 DATA REDUNDANCY IN SHELL : 4.20 REMARK 200 R MERGE FOR SHELL (I) : 0.56800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.78 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG3350, CBTP, PH 7.6, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 56.13467 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 112.26933 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 84.20200 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 140.33667 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 28.06733 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 56.13467 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 112.26933 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 140.33667 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 84.20200 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 28.06733 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2680 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17200 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -7.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 201 REMARK 465 MET A 202 REMARK 465 VAL A 473 REMARK 465 ASN A 474 REMARK 465 ASN A 475 REMARK 465 ASN A 476 REMARK 465 GLY A 477 REMARK 465 GLY A 478 REMARK 465 ALA A 479 REMARK 465 SER A 480 REMARK 465 GLN A 481 REMARK 465 ARG A 482 REMARK 465 THR A 483 REMARK 465 ALA A 484 REMARK 465 VAL A 485 REMARK 465 ALA A 536 REMARK 465 TYR A 537 REMARK 465 ASN A 538 REMARK 465 LYS A 539 REMARK 465 ASN A 540 REMARK 465 SER A 541 REMARK 465 ASN A 542 REMARK 465 ALA A 543 REMARK 465 ILE A 544 REMARK 465 GLY A 545 REMARK 465 GLN A 546 REMARK 465 ASN A 547 REMARK 465 SER A 548 REMARK 465 SER A 549 REMARK 465 SER A 550 REMARK 465 THR A 551 REMARK 465 LEU A 552 REMARK 465 ASN A 553 REMARK 465 TYR A 554 REMARK 465 U B 9 REMARK 465 U B 10 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 U B 8 C5' C4' O4' C3' O3' C2' O2' REMARK 470 U B 8 C1' N1 C2 O2 N3 C4 O4 REMARK 470 U B 8 C5 C6 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 206 25.58 -72.88 REMARK 500 GLN A 367 -121.09 47.46 REMARK 500 GLU A 427 41.40 -78.95 REMARK 500 LEU A 428 -15.19 -144.36 REMARK 500 TYR A 431 -36.11 -145.65 REMARK 500 THR A 599 -70.46 -70.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 711 DISTANCE = 5.88 ANGSTROMS REMARK 525 HOH A 712 DISTANCE = 7.62 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5BYM RELATED DB: PDB REMARK 900 5BYM CONTAINS THE SAME PROTEIN COMPLEXED WITH DIFFERENT RNA. REMARK 900 RELATED ID: 5BZ1 RELATED DB: PDB DBREF 5BZ5 A 201 600 UNP P39016 MPT5_YEAST 201 600 DBREF 5BZ5 B 1 12 PDB 5BZ5 5BZ5 1 12 SEQRES 1 A 400 SER MET VAL GLU ILE SER ALA LEU PRO LEU ARG ASP LEU SEQRES 2 A 400 ASP TYR ILE LYS LEU ALA THR ASP GLN PHE GLY CYS ARG SEQRES 3 A 400 PHE LEU GLN LYS LYS LEU GLU THR PRO SER GLU SER ASN SEQRES 4 A 400 MET VAL ARG ASP LEU MET TYR GLU GLN ILE LYS PRO PHE SEQRES 5 A 400 PHE LEU ASP LEU ILE LEU ASP PRO PHE GLY ASN TYR LEU SEQRES 6 A 400 VAL GLN LYS LEU CYS ASP TYR LEU THR ALA GLU GLN LYS SEQRES 7 A 400 THR LEU LEU ILE GLN THR ILE TYR PRO ASN VAL PHE GLN SEQRES 8 A 400 ILE SER ILE ASN GLN TYR GLY THR ARG SER LEU GLN LYS SEQRES 9 A 400 ILE ILE ASP THR VAL ASP ASN GLU VAL GLN ILE ASP LEU SEQRES 10 A 400 ILE ILE LYS GLY PHE SER GLN GLU PHE THR SER ILE GLU SEQRES 11 A 400 GLN VAL VAL THR LEU ILE ASN ASP LEU ASN GLY ASN HIS SEQRES 12 A 400 VAL ILE GLN LYS CYS ILE PHE LYS PHE SER PRO SER LYS SEQRES 13 A 400 PHE GLY PHE ILE ILE ASP ALA ILE VAL GLU GLN ASN ASN SEQRES 14 A 400 ILE ILE THR ILE SER THR HIS LYS HIS GLY CYS CYS VAL SEQRES 15 A 400 LEU GLN LYS LEU LEU SER VAL CYS THR LEU GLN GLN ILE SEQRES 16 A 400 PHE LYS ILE SER VAL LYS ILE VAL GLN PHE LEU PRO GLY SEQRES 17 A 400 LEU ILE ASN ASP GLN PHE GLY ASN TYR ILE ILE GLN PHE SEQRES 18 A 400 LEU LEU ASP ILE LYS GLU LEU ASP PHE TYR LEU LEU ALA SEQRES 19 A 400 GLU LEU PHE ASN ARG LEU SER ASN GLU LEU CYS GLN LEU SEQRES 20 A 400 SER CYS LEU LYS PHE SER SER ASN VAL VAL GLU LYS PHE SEQRES 21 A 400 ILE LYS LYS LEU PHE ARG ILE ILE THR GLY PHE ILE VAL SEQRES 22 A 400 ASN ASN ASN GLY GLY ALA SER GLN ARG THR ALA VAL ALA SEQRES 23 A 400 SER ASP ASP VAL ILE ASN ALA SER MET ASN ILE LEU LEU SEQRES 24 A 400 THR THR ILE ASP ILE PHE THR VAL ASN LEU ASN VAL LEU SEQRES 25 A 400 ILE ARG ASP ASN PHE GLY ASN TYR ALA LEU GLN THR LEU SEQRES 26 A 400 LEU ASP VAL LYS ASN TYR SER PRO LEU LEU ALA TYR ASN SEQRES 27 A 400 LYS ASN SER ASN ALA ILE GLY GLN ASN SER SER SER THR SEQRES 28 A 400 LEU ASN TYR GLY ASN PHE CYS ASN ASP PHE SER LEU LYS SEQRES 29 A 400 ILE GLY ASN LEU ILE VAL LEU THR LYS GLU LEU LEU PRO SEQRES 30 A 400 SER ILE LYS THR THR SER TYR ALA LYS LYS ILE LYS LEU SEQRES 31 A 400 LYS VAL LYS ALA TYR ALA GLU ALA THR GLY SEQRES 1 B 12 U G U A A C U U U U U A FORMUL 3 HOH *13(H2 O) HELIX 1 AA1 GLU A 204 LEU A 208 5 5 HELIX 2 AA2 PRO A 209 LEU A 213 5 5 HELIX 3 AA3 ASP A 214 THR A 220 1 7 HELIX 4 AA4 ASP A 221 GLU A 233 1 13 HELIX 5 AA5 GLU A 237 LYS A 250 1 14 HELIX 6 AA6 PHE A 252 LEU A 258 1 7 HELIX 7 AA7 PHE A 261 CYS A 270 1 10 HELIX 8 AA8 THR A 274 TYR A 286 1 13 HELIX 9 AA9 ASN A 288 ASN A 295 1 8 HELIX 10 AB1 TYR A 297 THR A 308 1 12 HELIX 11 AB2 ASN A 311 SER A 323 1 13 HELIX 12 AB3 SER A 328 ASP A 338 1 11 HELIX 13 AB4 GLY A 341 PHE A 352 1 12 HELIX 14 AB5 SER A 353 LYS A 356 5 4 HELIX 15 AB6 PHE A 357 VAL A 365 1 9 HELIX 16 AB7 ASN A 368 THR A 375 1 8 HELIX 17 AB8 HIS A 376 SER A 388 1 13 HELIX 18 AB9 THR A 391 PHE A 405 1 15 HELIX 19 AC1 LEU A 406 LEU A 409 5 4 HELIX 20 AC2 PHE A 414 LEU A 423 1 10 HELIX 21 AC3 LEU A 428 SER A 441 1 14 HELIX 22 AC4 GLU A 443 CYS A 449 1 7 HELIX 23 AC5 PHE A 452 ILE A 472 1 21 HELIX 24 AC6 SER A 487 ASN A 508 1 22 HELIX 25 AC7 ASN A 508 ILE A 513 1 6 HELIX 26 AC8 PHE A 517 ASP A 527 1 11 HELIX 27 AC9 TYR A 531 LEU A 535 5 5 HELIX 28 AD1 ASN A 556 LEU A 575 1 20 HELIX 29 AD2 LEU A 576 LYS A 580 5 5 HELIX 30 AD3 TYR A 584 GLY A 600 1 17 CRYST1 105.852 105.852 168.404 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009447 0.005454 0.000000 0.00000 SCALE2 0.000000 0.010909 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005938 0.00000