HEADER LIGASE 05-SEP-14 4WD1 TITLE ACETOACETYL-COA SYNTHETASE FROM STREPTOMYCES LIVIDANS COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACETOACETATE-COA LIGASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES LIVIDANS TK24; SOURCE 3 ORGANISM_TAXID: 457428; SOURCE 4 GENE: SSPG_06161; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: C41(LAMBDA)DE3 KEYWDS ADENYLATE-FORMING ENZYME, ANL SUPERFAMILY, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR A.M.GULICK,C.A.MITCHELL REVDAT 5 27-SEP-23 4WD1 1 REMARK LINK REVDAT 4 25-DEC-19 4WD1 1 REMARK REVDAT 3 20-SEP-17 4WD1 1 SOURCE KEYWDS JRNL REMARK REVDAT 2 25-FEB-15 4WD1 1 JRNL REVDAT 1 28-JAN-15 4WD1 0 JRNL AUTH C.A.MITCHELL,A.C.TUCKER,J.C.ESCALANTE-SEMERENA,A.M.GULICK JRNL TITL THE STRUCTURE OF S. LIVIDANS ACETOACETYL-COA SYNTHETASE JRNL TITL 2 SHOWS A NOVEL INTERACTION BETWEEN THE C-TERMINAL EXTENSION JRNL TITL 3 AND THE N-TERMINAL DOMAIN. JRNL REF PROTEINS V. 83 575 2015 JRNL REFN ESSN 1097-0134 JRNL PMID 25488501 JRNL DOI 10.1002/PROT.24738 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.1_743) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.18 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 66529 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.162 REMARK 3 R VALUE (WORKING SET) : 0.161 REMARK 3 FREE R VALUE : 0.194 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 3375 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 1.9304 - 1.9032 0.98 2571 138 0.1903 0.2333 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.83 REMARK 3 K_SOL : 0.37 REMARK 3 B_SOL : 42.68 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.410 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.670 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 19.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.54160 REMARK 3 B22 (A**2) : 1.54160 REMARK 3 B33 (A**2) : -3.08330 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 5226 REMARK 3 ANGLE : 1.001 7137 REMARK 3 CHIRALITY : 0.071 785 REMARK 3 PLANARITY : 0.005 929 REMARK 3 DIHEDRAL : 11.061 1841 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4WD1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-SEP-14. REMARK 100 THE DEPOSITION ID IS D_1000203594. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-JAN-13 REMARK 200 TEMPERATURE (KELVIN) : 113 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL7-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9794 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 66573 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 7.100 REMARK 200 R MERGE (I) : 0.05600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 85.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.24600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 1PG4 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.77 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.91 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.7-1.2 M K3CITRATE 50 MM BTP REMARK 280 COVERSLIP WAS LEFT OPEN TO ATMOSPHERE, PH 7.0, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 287K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 44.63533 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 89.27067 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 89.27067 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 44.63533 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4790 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24140 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 43.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 THR A 3 REMARK 465 GLU A 4 REMARK 465 ASN A 5 REMARK 465 GLN A 531 REMARK 465 GLY A 532 REMARK 465 GLN A 560 REMARK 465 PRO A 561 REMARK 465 ASP A 562 REMARK 465 GLY A 563 REMARK 465 GLY A 564 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 46 NE CZ NH1 NH2 REMARK 470 LYS A 208 CE NZ REMARK 470 GLU A 238 CG CD OE1 OE2 REMARK 470 ARG A 530 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 542 CD OE1 OE2 REMARK 470 ARG A 546 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 549 CG CD OE1 OE2 REMARK 470 ARG A 551 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 559 CG CD OE1 OE2 REMARK 470 THR A 578 OG1 CG2 REMARK 470 ASP A 581 CG OD1 OD2 REMARK 470 LEU A 584 CG CD1 CD2 REMARK 470 ASP A 585 CG OD1 OD2 REMARK 470 LYS A 588 CG CD CE NZ REMARK 470 ARG A 589 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 592 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 595 CG CD1 CD2 REMARK 470 ARG A 598 NE CZ NH1 NH2 REMARK 470 LYS A 617 CD CE NZ REMARK 470 LYS A 656 CG CD CE NZ REMARK 470 ARG A 657 CG CD NE CZ NH1 NH2 REMARK 470 SER A 658 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 1274 O HOH A 1275 2.01 REMARK 500 O HOH A 812 O HOH A 871 2.03 REMARK 500 OD1 ASP A 53 NH2 ARG A 78 2.03 REMARK 500 NH1 ARG A 24 O HOH A 801 2.09 REMARK 500 O HOH A 1182 O HOH A 1241 2.10 REMARK 500 O HOH A 1051 O HOH A 1135 2.12 REMARK 500 O HOH A 1131 O HOH A 1227 2.17 REMARK 500 O HOH A 1210 O HOH A 1232 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 875 O HOH A 913 3664 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 51 60.43 -118.09 REMARK 500 ASP A 114 -158.93 -125.94 REMARK 500 SER A 428 -161.73 -168.66 REMARK 500 ARG A 482 -179.96 -179.15 REMARK 500 LEU A 595 -84.76 -112.55 REMARK 500 ILE A 619 72.46 -118.31 REMARK 500 ASN A 643 94.62 -160.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1101 DISTANCE = 5.82 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 723 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 77 OD2 REMARK 620 2 THR A 79 O 109.4 REMARK 620 3 THR A 79 OG1 75.8 72.7 REMARK 620 4 PRO A 81 O 160.1 72.9 122.5 REMARK 620 5 EDO A 716 O2 76.8 147.9 137.6 91.2 REMARK 620 6 HOH A1294 O 125.8 103.0 73.9 70.8 97.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 724 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 545 O REMARK 620 2 LEU A 547 O 85.6 REMARK 620 3 ILE A 550 O 96.2 77.4 REMARK 620 4 HOH A 900 O 95.0 77.0 151.1 REMARK 620 5 HOH A1287 O 71.7 127.9 149.1 59.8 REMARK 620 6 HOH A1288 O 89.9 152.5 76.1 130.4 75.5 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 703 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 704 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 705 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 706 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 707 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 708 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 709 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 710 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 711 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 712 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 713 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 714 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 715 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 716 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 717 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 718 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 719 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 720 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 721 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 722 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 723 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 724 DBREF 4WD1 A 1 658 UNP D6EQU8 D6EQU8_STRLI 1 658 SEQRES 1 A 658 MET SER THR GLU ASN PRO GLN PRO LEU TRP GLN PRO ASP SEQRES 2 A 658 ALA GLN ARG ILE ALA GLN ALA ARG ILE THR ARG PHE GLN SEQRES 3 A 658 ALA TRP ALA ALA GLU HIS HIS GLY ALA PRO ALA GLU GLY SEQRES 4 A 658 GLY TYR ALA ALA LEU HIS ARG TRP SER VAL ASP GLU LEU SEQRES 5 A 658 ASP THR PHE TRP LYS ALA VAL THR GLU TRP PHE ASP VAL SEQRES 6 A 658 ARG PHE SER THR PRO TYR ALA ARG VAL LEU GLY ASP ARG SEQRES 7 A 658 THR MET PRO GLY ALA GLN TRP PHE PRO GLY ALA THR LEU SEQRES 8 A 658 ASN TYR ALA GLU HIS ALA LEU ARG ALA ALA GLY THR ARG SEQRES 9 A 658 PRO ASP GLU PRO ALA LEU LEU TYR VAL ASP GLU THR HIS SEQRES 10 A 658 GLU PRO ALA PRO VAL THR TRP ALA GLU LEU ARG ARG GLN SEQRES 11 A 658 VAL ALA SER LEU ALA ALA GLU LEU ARG ALA LEU GLY VAL SEQRES 12 A 658 ARG PRO GLY ASP ARG VAL SER GLY TYR LEU PRO ASN ILE SEQRES 13 A 658 PRO GLN ALA VAL VAL ALA LEU LEU ALA THR ALA ALA VAL SEQRES 14 A 658 GLY GLY VAL TRP THR SER CYS ALA PRO ASP PHE GLY ALA SEQRES 15 A 658 ARG SER VAL LEU ASP ARG PHE GLN GLN VAL GLU PRO VAL SEQRES 16 A 658 VAL LEU PHE THR VAL ASP GLY TYR ARG TYR GLY GLY LYS SEQRES 17 A 658 GLU HIS ASP ARG ARG ASP THR VAL ALA GLU LEU ARG ARG SEQRES 18 A 658 GLU LEU PRO THR LEU ARG ALA VAL ILE HIS ILE PRO LEU SEQRES 19 A 658 LEU GLY THR GLU ALA PRO ASP GLY THR LEU ASP TRP GLU SEQRES 20 A 658 THR LEU THR ALA ALA ASP ALA GLU PRO VAL TYR GLU GLN SEQRES 21 A 658 VAL PRO PHE ASP HIS PRO LEU TRP VAL LEU TYR SER SER SEQRES 22 A 658 GLY THR THR GLY LEU PRO LYS ALA ILE VAL GLN SER GLN SEQRES 23 A 658 GLY GLY ILE LEU VAL GLU HIS LEU LYS GLN LEU GLY LEU SEQRES 24 A 658 HIS CYS ASP LEU GLY PRO GLY ASP ARG PHE PHE TRP TYR SEQRES 25 A 658 THR SER THR GLY TRP MET MET TRP ASN PHE LEU VAL SER SEQRES 26 A 658 GLY LEU LEU THR GLY THR THR ILE VAL LEU TYR ASP GLY SEQRES 27 A 658 SER PRO GLY PHE PRO ALA THR ASP ALA GLN TRP ARG ILE SEQRES 28 A 658 ALA GLU ARG THR GLY ALA THR LEU PHE GLY THR SER ALA SEQRES 29 A 658 ALA TYR VAL MET ALA CYS ARG LYS ALA GLY VAL HIS PRO SEQRES 30 A 658 ALA ARG ASP LEU ASP LEU SER ALA ILE GLN CYS VAL ALA SEQRES 31 A 658 THR THR GLY SER PRO LEU PRO PRO ASP GLY PHE ARG TRP SEQRES 32 A 658 LEU HIS ASP GLU PHE ALA ALA GLY GLY ALA ASP LEU TRP SEQRES 33 A 658 ILE ALA SER VAL SER GLY GLY THR ASP VAL CYS SER CYS SEQRES 34 A 658 PHE ALA GLY ALA VAL PRO THR LEU PRO VAL HIS ILE GLY SEQRES 35 A 658 GLU LEU GLN ALA PRO GLY LEU GLY THR ASP LEU GLN SER SEQRES 36 A 658 TRP ASP PRO SER GLY ASP PRO LEU THR ASP GLU VAL GLY SEQRES 37 A 658 GLU LEU VAL VAL THR ASN PRO MET PRO SER MET PRO ILE SEQRES 38 A 658 ARG PHE TRP ASN ASP PRO ASP GLY SER ARG TYR HIS ASP SEQRES 39 A 658 SER TYR PHE ASP THR TYR PRO GLY VAL TRP ARG HIS GLY SEQRES 40 A 658 ASP TRP ILE THR LEU THR SER ARG GLY SER VAL VAL ILE SEQRES 41 A 658 HIS GLY ARG SER ASP SER THR LEU ASN ARG GLN GLY VAL SEQRES 42 A 658 ARG MET GLY SER ALA ASP ILE TYR GLU ALA VAL GLU ARG SEQRES 43 A 658 LEU PRO GLU ILE ARG GLU SER LEU VAL ILE GLY ILE GLU SEQRES 44 A 658 GLN PRO ASP GLY GLY TYR TRP MET PRO LEU PHE VAL HIS SEQRES 45 A 658 LEU ALA PRO GLY ALA THR LEU ASP ASP ALA LEU LEU ASP SEQRES 46 A 658 ARG ILE LYS ARG THR ILE ARG VAL ASN LEU SER PRO ARG SEQRES 47 A 658 HIS VAL PRO ASP GLU VAL ILE GLU VAL PRO GLY ILE PRO SEQRES 48 A 658 HIS THR LEU THR GLY LYS ARG ILE GLU VAL PRO VAL LYS SEQRES 49 A 658 ARG LEU LEU GLN GLY THR PRO LEU ASP LYS ALA VAL ASN SEQRES 50 A 658 PRO GLY SER ILE ASP ASN LEU ASP LEU LEU HIS PHE TYR SEQRES 51 A 658 GLU GLU LEU ALA ARG LYS ARG SER HET EDO A 701 4 HET EDO A 702 4 HET EDO A 703 4 HET EDO A 704 4 HET EDO A 705 4 HET EDO A 706 4 HET EDO A 707 4 HET EDO A 708 4 HET EDO A 709 4 HET EDO A 710 4 HET EDO A 711 4 HET EDO A 712 4 HET EDO A 713 4 HET EDO A 714 4 HET EDO A 715 4 HET EDO A 716 4 HET EDO A 717 4 HET EDO A 718 4 HET EDO A 719 4 HET EDO A 720 4 HET EDO A 721 4 HET EDO A 722 4 HET CA A 723 1 HET CA A 724 1 HETNAM EDO 1,2-ETHANEDIOL HETNAM CA CALCIUM ION HETSYN EDO ETHYLENE GLYCOL FORMUL 2 EDO 22(C2 H6 O2) FORMUL 24 CA 2(CA 2+) FORMUL 26 HOH *507(H2 O) HELIX 1 AA1 ASP A 13 ALA A 20 1 8 HELIX 2 AA2 ALA A 20 HIS A 33 1 14 HELIX 3 AA3 GLY A 39 GLU A 51 1 13 HELIX 4 AA4 GLU A 51 PHE A 63 1 13 HELIX 5 AA5 ASN A 92 LEU A 98 1 7 HELIX 6 AA6 ARG A 99 THR A 103 5 5 HELIX 7 AA7 TRP A 124 LEU A 141 1 18 HELIX 8 AA8 ILE A 156 VAL A 169 1 14 HELIX 9 AA9 GLY A 181 GLN A 190 1 10 HELIX 10 AB1 ARG A 212 LEU A 223 1 12 HELIX 11 AB2 TRP A 246 THR A 250 1 5 HELIX 12 AB3 GLN A 286 LEU A 299 1 14 HELIX 13 AB4 TRP A 317 SER A 325 1 9 HELIX 14 AB5 GLY A 326 GLY A 330 5 5 HELIX 15 AB6 ASP A 346 THR A 355 1 10 HELIX 16 AB7 ALA A 364 ALA A 373 1 10 HELIX 17 AB8 HIS A 376 LEU A 381 1 6 HELIX 18 AB9 PRO A 397 ALA A 410 1 14 HELIX 19 AC1 ASP A 486 ASP A 488 5 3 HELIX 20 AC2 GLY A 489 PHE A 497 1 9 HELIX 21 AC3 ASP A 525 THR A 527 5 3 HELIX 22 AC4 GLY A 536 GLU A 545 1 10 HELIX 23 AC5 ASP A 580 LEU A 595 1 16 HELIX 24 AC6 SER A 596 VAL A 600 5 5 HELIX 25 AC7 ILE A 619 GLN A 628 1 10 HELIX 26 AC8 PRO A 631 VAL A 636 1 6 HELIX 27 AC9 ASN A 637 ILE A 641 5 5 HELIX 28 AD1 ASN A 643 SER A 658 1 16 SHEET 1 AA1 2 THR A 90 LEU A 91 0 SHEET 2 AA1 2 VAL A 261 PRO A 262 -1 O VAL A 261 N LEU A 91 SHEET 1 AA2 7 ALA A 120 THR A 123 0 SHEET 2 AA2 7 PRO A 108 VAL A 113 -1 N ALA A 109 O VAL A 122 SHEET 3 AA2 7 THR A 332 TYR A 336 1 O ILE A 333 N ALA A 109 SHEET 4 AA2 7 ARG A 308 TRP A 311 1 N PHE A 309 O THR A 332 SHEET 5 AA2 7 LEU A 359 SER A 363 1 O GLY A 361 N PHE A 310 SHEET 6 AA2 7 CYS A 388 THR A 392 1 O ALA A 390 N THR A 362 SHEET 7 AA2 7 TRP A 416 VAL A 420 1 O VAL A 420 N THR A 391 SHEET 1 AA3 5 VAL A 172 CYS A 176 0 SHEET 2 AA3 5 ARG A 148 TYR A 152 1 N VAL A 149 O VAL A 172 SHEET 3 AA3 5 VAL A 196 VAL A 200 1 O VAL A 196 N SER A 150 SHEET 4 AA3 5 ALA A 228 ILE A 232 1 O ILE A 230 N LEU A 197 SHEET 5 AA3 5 LEU A 244 ASP A 245 1 O LEU A 244 N HIS A 231 SHEET 1 AA4 2 GLY A 202 TYR A 205 0 SHEET 2 AA4 2 LYS A 208 ASP A 211 -1 O HIS A 210 N TYR A 203 SHEET 1 AA5 3 PRO A 266 TYR A 271 0 SHEET 2 AA5 3 ALA A 281 SER A 285 -1 O ILE A 282 N LEU A 270 SHEET 3 AA5 3 ARG A 482 TRP A 484 -1 O TRP A 484 N ALA A 281 SHEET 1 AA6 2 ALA A 431 GLY A 432 0 SHEET 2 AA6 2 ALA A 446 PRO A 447 -1 O ALA A 446 N GLY A 432 SHEET 1 AA7 4 LEU A 453 TRP A 456 0 SHEET 2 AA7 4 VAL A 467 VAL A 472 -1 O GLU A 469 N TRP A 456 SHEET 3 AA7 4 TRP A 504 LEU A 512 -1 O ILE A 510 N GLY A 468 SHEET 4 AA7 4 VAL A 518 ARG A 523 -1 O GLY A 522 N TRP A 509 SHEET 1 AA8 3 ILE A 550 VAL A 555 0 SHEET 2 AA8 3 PRO A 568 LEU A 573 -1 O PHE A 570 N LEU A 554 SHEET 3 AA8 3 GLU A 603 GLU A 606 1 O GLU A 603 N LEU A 569 LINK OD2 ASP A 77 CA CA A 723 1555 1555 2.76 LINK O THR A 79 CA CA A 723 1555 1555 2.73 LINK OG1 THR A 79 CA CA A 723 1555 1555 2.72 LINK O PRO A 81 CA CA A 723 1555 1555 2.94 LINK O GLU A 545 CA CA A 724 1555 1555 2.76 LINK O LEU A 547 CA CA A 724 1555 1555 2.84 LINK O ILE A 550 CA CA A 724 1555 1555 2.64 LINK O2 EDO A 716 CA CA A 723 1555 1555 2.86 LINK CA CA A 723 O HOH A1294 1555 1555 3.03 LINK CA CA A 724 O HOH A 900 1555 1555 2.94 LINK CA CA A 724 O HOH A1287 1555 1555 2.99 LINK CA CA A 724 O HOH A1288 1555 1555 2.90 CISPEP 1 MET A 80 PRO A 81 0 -3.70 CISPEP 2 PHE A 342 PRO A 343 0 3.63 SITE 1 AC1 5 ASP A 13 ALA A 14 GLN A 15 ALA A 18 SITE 2 AC1 5 HOH A1171 SITE 1 AC2 7 GLY A 40 TYR A 41 THR A 436 LEU A 437 SITE 2 AC2 7 EDO A 703 HOH A1058 HOH A1093 SITE 1 AC3 7 ILE A 22 THR A 23 GLN A 26 TYR A 41 SITE 2 AC3 7 THR A 436 EDO A 702 HOH A1022 SITE 1 AC4 2 TRP A 28 GLU A 61 SITE 1 AC5 5 PRO A 438 HIS A 440 ARG A 515 HOH A1014 SITE 2 AC5 5 HOH A1254 SITE 1 AC6 6 LEU A 396 PHE A 401 SER A 419 VAL A 439 SITE 2 AC6 6 HIS A 440 GLU A 443 SITE 1 AC7 5 ALA A 42 PRO A 447 GLY A 516 HOH A1015 SITE 2 AC7 5 HOH A1214 SITE 1 AC8 7 HIS A 265 PRO A 266 TRP A 403 ASP A 406 SITE 2 AC8 7 GLU A 407 HOH A 809 HOH A 842 SITE 1 AC9 6 PHE A 63 HIS A 96 LEU A 294 LEU A 328 SITE 2 AC9 6 HOH A 869 HOH A 874 SITE 1 AD1 2 GLN A 130 TRP A 246 SITE 1 AD2 9 ALA A 177 PRO A 178 ASP A 179 TYR A 203 SITE 2 AD2 9 TYR A 205 SER A 314 EDO A 712 HOH A 960 SITE 3 AD2 9 HOH A 966 SITE 1 AD3 9 TYR A 312 THR A 313 SER A 314 TYR A 336 SITE 2 AD3 9 ASP A 337 GLY A 338 EDO A 711 HOH A 938 SITE 3 AD3 9 HOH A1119 SITE 1 AD4 4 ARG A 220 VAL A 229 GLY A 242 HOH A 818 SITE 1 AD5 5 SER A 421 PHE A 430 ALA A 431 ASP A 508 SITE 2 AD5 5 HOH A1268 SITE 1 AD6 8 VAL A 65 ARG A 66 LEU A 91 ASN A 92 SITE 2 AD6 8 GLU A 95 HIS A 96 ARG A 99 HOH A1080 SITE 1 AD7 5 ASP A 77 GLY A 82 ASP A 380 CA A 723 SITE 2 AD7 5 HOH A 803 SITE 1 AD8 5 PHE A 180 ARG A 188 TYR A 271 SER A 272 SITE 2 AD8 5 HOH A1025 SITE 1 AD9 4 GLU A 218 GLY A 330 HOH A 844 HOH A 895 SITE 1 AE1 3 ASP A 179 TYR A 203 TYR A 205 SITE 1 AE2 8 GLY A 102 THR A 103 PRO A 105 PHE A 180 SITE 2 AE2 8 GLY A 181 ARG A 212 THR A 215 HOH A 897 SITE 1 AE3 4 ARG A 308 ASP A 633 PRO A 638 HOH A 879 SITE 1 AE4 4 GLY A 341 THR A 345 TYR A 366 ALA A 369 SITE 1 AE5 6 ASP A 77 THR A 79 PRO A 81 GLY A 82 SITE 2 AE5 6 EDO A 716 HOH A1294 SITE 1 AE6 6 GLU A 545 LEU A 547 ILE A 550 HOH A 900 SITE 2 AE6 6 HOH A1287 HOH A1288 CRYST1 104.408 104.408 133.906 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009578 0.005530 0.000000 0.00000 SCALE2 0.000000 0.011060 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007468 0.00000