HEADER TRANSFERASE 13-AUG-14 4UC0 TITLE CRYSTAL STRUCTURE OF A PURINE NUCLEOSIDE PHOSPHORYLASE (PSI-NYSGRC- TITLE 2 029736) FROM AGROBACTERIUM VITIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PURINE NUCLEOSIDE PHOSPHORYLASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: INOSINE-GUANOSINE PHOSPHORYLASE; COMPND 5 EC: 2.4.2.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AGROBACTERIUM VITIS; SOURCE 3 ORGANISM_TAXID: 373; SOURCE 4 GENE: AVI_0263; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PSGC KEYWDS PROTEIN STRUCTURE INITIATIVE, NYSGRC, STRUCTURAL GENOMICS, NEW YORK KEYWDS 2 STRUCTURAL GENOMICS RESEARCH CONSORTIUM, PSI-BIOLOGY, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR S.A.CAMERON,P.SAMPATHKUMAR,U.A.RAMAGOPAL,J.ATTONITO,M.AHMED,R.BHOSLE, AUTHOR 2 J.BONANNO,S.CHAMALA,S.CHOWDHURY,A.S.GLENN,J.HAMMONDS,B.HILLERICH, AUTHOR 3 J.D.LOVE,R.SEIDEL,M.STEAD,R.TORO,S.R.WASSERMAN,V.L.SCHRAMM,S.C.ALMO, AUTHOR 4 NEW YORK STRUCTURAL GENOMICS RESEARCH CONSORTIUM (NYSGRC) REVDAT 3 27-DEC-23 4UC0 1 REMARK REVDAT 2 04-DEC-19 4UC0 1 SOURCE REMARK REVDAT 1 08-OCT-14 4UC0 0 JRNL AUTH S.A.CAMERON,P.SAMPATHKUMAR,U.A.RAMAGOPAL,J.ATTONITO,M.AHMED, JRNL AUTH 2 R.BHOSLE,J.BONANNO,S.CHAMALA,S.CHOWDHURY,A.S.GLENN, JRNL AUTH 3 J.HAMMONDS,B.HILLERICH,J.D.LOVE,R.SEIDEL,M.STEAD,R.TORO, JRNL AUTH 4 S.R.WASSERMAN,V.L.SCHRAMM,S.C.ALMO, JRNL AUTH 5 NEW YORK STRUCTURAL GENOMICS RESEARCH CONSORTIUM (NYSGRC) JRNL TITL CRYSTAL STRUCTURE OF A PURINE NUCLEOSIDE PHOSPHORYLASE JRNL TITL 2 (PSI-NYSGRC-029736) FROM AGROBACTERIUM VITIS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0073 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 10039 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 519 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.46 REMARK 3 REFLECTION IN BIN (WORKING SET) : 699 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.86 REMARK 3 BIN R VALUE (WORKING SET) : 0.2140 REMARK 3 BIN FREE R VALUE SET COUNT : 37 REMARK 3 BIN FREE R VALUE : 0.2960 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1806 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 18 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 48.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 59.63 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.42000 REMARK 3 B22 (A**2) : -0.42000 REMARK 3 B33 (A**2) : 1.38000 REMARK 3 B12 (A**2) : -0.21000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.402 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.241 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.195 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 18.073 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.940 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1847 ; 0.008 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1808 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2503 ; 1.361 ; 2.011 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4137 ; 0.744 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 244 ; 5.931 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 68 ;38.309 ;22.941 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 253 ;14.803 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 15 ;17.888 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 291 ; 0.070 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2091 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 396 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 985 ; 1.929 ; 4.061 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 984 ; 1.913 ; 4.059 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1226 ; 3.036 ; 6.080 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3 A 267 REMARK 3 ORIGIN FOR THE GROUP (A): 0.4525 34.2599 15.5224 REMARK 3 T TENSOR REMARK 3 T11: 0.0631 T22: 0.0635 REMARK 3 T33: 0.1229 T12: 0.0052 REMARK 3 T13: 0.0064 T23: 0.0255 REMARK 3 L TENSOR REMARK 3 L11: 2.6865 L22: 3.2188 REMARK 3 L33: 2.0342 L12: -0.8059 REMARK 3 L13: 0.8934 L23: -1.2091 REMARK 3 S TENSOR REMARK 3 S11: -0.0607 S12: -0.3106 S13: -0.4777 REMARK 3 S21: 0.2643 S22: 0.0925 S23: 0.0201 REMARK 3 S31: 0.1123 S32: -0.1569 S33: -0.0318 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 4UC0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-AUG-14. REMARK 100 THE DEPOSITION ID IS D_1000203158. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-JUL-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97931 REMARK 200 MONOCHROMATOR : DIAMOND REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19502 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 11.00 REMARK 200 R MERGE (I) : 0.09300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.44 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 10.30 REMARK 200 R MERGE FOR SHELL (I) : 0.94200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.15 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.09 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN (20 MM HEPES, PH 7.5, 150 MM REMARK 280 NACL, 10% GLYCEROL; RESERVOIR (0.16M MGCL2, 0.08M TRIS-HCL PH REMARK 280 8.5, 24% PEG 4000, 20% GLYCEROL - MCSG1 #22); CRYOPROTECTION REMARK 280 (NONE), VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 23.17800 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 23.17800 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 23.17800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A TRIMER REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6330 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26960 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 48.94050 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 84.76743 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 -48.94050 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 84.76743 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 SER A -14 REMARK 465 SER A -13 REMARK 465 GLY A -12 REMARK 465 VAL A -11 REMARK 465 ASP A -10 REMARK 465 LEU A -9 REMARK 465 GLY A -8 REMARK 465 THR A -7 REMARK 465 GLU A -6 REMARK 465 ASN A -5 REMARK 465 LEU A -4 REMARK 465 TYR A -3 REMARK 465 PHE A -2 REMARK 465 GLN A -1 REMARK 465 SER A 0 REMARK 465 MSE A 1 REMARK 465 THR A 2 REMARK 465 GLN A 50 REMARK 465 GLY A 51 REMARK 465 GLY A 52 REMARK 465 VAL A 53 REMARK 465 SER A 54 REMARK 465 GLY A 55 REMARK 465 HIS A 56 REMARK 465 ALA A 57 REMARK 465 GLY A 234 REMARK 465 ALA A 235 REMARK 465 GLU A 236 REMARK 465 LEU A 237 REMARK 465 SER A 238 REMARK 465 HIS A 239 REMARK 465 GLU A 240 REMARK 465 GLU A 241 REMARK 465 THR A 242 REMARK 465 LYS A 243 REMARK 465 LEU A 268 REMARK 465 GLY A 269 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 10 CG OD1 OD2 REMARK 470 LYS A 58 CG CD CE NZ REMARK 470 ASP A 165 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 13 6.76 58.03 REMARK 500 THR A 205 -48.89 79.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HPA A 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGRC-029736 RELATED DB: TARGETTRACK DBREF 4UC0 A 1 269 UNP B9JYS2 B9JYS2_AGRVS 1 269 SEQADV 4UC0 MSE A -21 UNP B9JYS2 EXPRESSION TAG SEQADV 4UC0 HIS A -20 UNP B9JYS2 EXPRESSION TAG SEQADV 4UC0 HIS A -19 UNP B9JYS2 EXPRESSION TAG SEQADV 4UC0 HIS A -18 UNP B9JYS2 EXPRESSION TAG SEQADV 4UC0 HIS A -17 UNP B9JYS2 EXPRESSION TAG SEQADV 4UC0 HIS A -16 UNP B9JYS2 EXPRESSION TAG SEQADV 4UC0 HIS A -15 UNP B9JYS2 EXPRESSION TAG SEQADV 4UC0 SER A -14 UNP B9JYS2 EXPRESSION TAG SEQADV 4UC0 SER A -13 UNP B9JYS2 EXPRESSION TAG SEQADV 4UC0 GLY A -12 UNP B9JYS2 EXPRESSION TAG SEQADV 4UC0 VAL A -11 UNP B9JYS2 EXPRESSION TAG SEQADV 4UC0 ASP A -10 UNP B9JYS2 EXPRESSION TAG SEQADV 4UC0 LEU A -9 UNP B9JYS2 EXPRESSION TAG SEQADV 4UC0 GLY A -8 UNP B9JYS2 EXPRESSION TAG SEQADV 4UC0 THR A -7 UNP B9JYS2 EXPRESSION TAG SEQADV 4UC0 GLU A -6 UNP B9JYS2 EXPRESSION TAG SEQADV 4UC0 ASN A -5 UNP B9JYS2 EXPRESSION TAG SEQADV 4UC0 LEU A -4 UNP B9JYS2 EXPRESSION TAG SEQADV 4UC0 TYR A -3 UNP B9JYS2 EXPRESSION TAG SEQADV 4UC0 PHE A -2 UNP B9JYS2 EXPRESSION TAG SEQADV 4UC0 GLN A -1 UNP B9JYS2 EXPRESSION TAG SEQADV 4UC0 SER A 0 UNP B9JYS2 EXPRESSION TAG SEQRES 1 A 291 MSE HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 291 GLY THR GLU ASN LEU TYR PHE GLN SER MSE THR PRO ALA SEQRES 3 A 291 VAL ASP LEU LEU ILE ASP ARG LEU ASN GLY LEU LEU PRO SEQRES 4 A 291 ARG ILE ALA ILE VAL LEU GLY SER GLY LEU GLY GLY LEU SEQRES 5 A 291 VAL ASP GLU VAL GLU ASN ALA VAL ARG ILE PRO PHE ALA SEQRES 6 A 291 ASP ILE PRO GLY PHE PRO GLN GLY GLY VAL SER GLY HIS SEQRES 7 A 291 ALA LYS GLU LEU VAL ALA GLY LEU PHE ALA GLY GLN PRO SEQRES 8 A 291 ILE ILE MSE LEU ALA GLY ARG VAL HIS TYR TYR GLU GLU SEQRES 9 A 291 GLY ASP ALA ALA ALA MSE ARG LEU PRO ILE GLU THR LEU SEQRES 10 A 291 ALA SER LEU GLY VAL THR THR LEU ILE LEU THR ASN ALA SEQRES 11 A 291 ALA GLY SER LEU ARG ALA ASP MSE PRO PRO GLY SER VAL SEQRES 12 A 291 MSE GLN LEU ILE ASP HIS ILE ASN PHE SER GLY HIS ASN SEQRES 13 A 291 PRO LEU ILE GLY GLU THR GLY ASP GLY ARG PHE VAL GLY SEQRES 14 A 291 MSE THR GLN ALA TYR ASP GLY GLU LEU ALA GLU ALA MSE SEQRES 15 A 291 ARG ARG ALA ALA ASP ALA GLU ASP ILE SER LEU SER SER SEQRES 16 A 291 GLY VAL TYR MSE TRP PHE SER GLY PRO SER PHE GLU THR SEQRES 17 A 291 PRO ALA GLU ILE ARG MSE ALA ARG THR LEU GLY ALA ASP SEQRES 18 A 291 ALA VAL GLY MSE SER THR VAL PRO GLU VAL ILE LEU ALA SEQRES 19 A 291 ARG PHE PHE GLY LEU LYS VAL ALA ALA ALA SER VAL ILE SEQRES 20 A 291 THR ASN TYR GLY ALA GLY MSE THR GLY ALA GLU LEU SER SEQRES 21 A 291 HIS GLU GLU THR LYS ASP MSE ALA PRO ILE GLY GLY ARG SEQRES 22 A 291 ARG LEU VAL ALA ILE LEU LYS ARG MSE ILE VAL ASP GLY SEQRES 23 A 291 GLY ALA ASP LEU GLY MODRES 4UC0 MSE A 72 MET MODIFIED RESIDUE MODRES 4UC0 MSE A 88 MET MODIFIED RESIDUE MODRES 4UC0 MSE A 116 MET MODIFIED RESIDUE MODRES 4UC0 MSE A 122 MET MODIFIED RESIDUE MODRES 4UC0 MSE A 148 MET MODIFIED RESIDUE MODRES 4UC0 MSE A 160 MET MODIFIED RESIDUE MODRES 4UC0 MSE A 177 MET MODIFIED RESIDUE MODRES 4UC0 MSE A 192 MET MODIFIED RESIDUE MODRES 4UC0 MSE A 203 MET MODIFIED RESIDUE MODRES 4UC0 MSE A 232 MET MODIFIED RESIDUE MODRES 4UC0 MSE A 245 MET MODIFIED RESIDUE MODRES 4UC0 MSE A 260 MET MODIFIED RESIDUE HET MSE A 72 8 HET MSE A 88 8 HET MSE A 116 8 HET MSE A 122 8 HET MSE A 148 8 HET MSE A 160 8 HET MSE A 177 8 HET MSE A 192 8 HET MSE A 203 8 HET MSE A 232 8 HET MSE A 245 8 HET MSE A 260 8 HET HPA A 301 10 HETNAM MSE SELENOMETHIONINE HETNAM HPA HYPOXANTHINE FORMUL 1 MSE 12(C5 H11 N O2 SE) FORMUL 2 HPA C5 H4 N4 O FORMUL 3 HOH *18(H2 O) HELIX 1 AA1 PRO A 3 LEU A 12 1 10 HELIX 2 AA2 LEU A 27 ASP A 32 5 6 HELIX 3 AA3 ALA A 43 ILE A 45 5 3 HELIX 4 AA4 HIS A 78 GLY A 83 1 6 HELIX 5 AA5 MSE A 88 LEU A 98 1 11 HELIX 6 AA6 GLY A 141 PHE A 145 5 5 HELIX 7 AA7 ASP A 153 ASP A 168 1 16 HELIX 8 AA8 THR A 186 LEU A 196 1 11 HELIX 9 AA9 THR A 205 PHE A 215 1 11 HELIX 10 AB1 MSE A 245 GLY A 264 1 20 SHEET 1 AA110 GLU A 35 PRO A 41 0 SHEET 2 AA110 GLU A 59 PHE A 65 -1 O LEU A 60 N ILE A 40 SHEET 3 AA110 GLN A 68 ALA A 74 -1 O GLN A 68 N PHE A 65 SHEET 4 AA110 ILE A 19 LEU A 23 1 N ILE A 21 O LEU A 73 SHEET 5 AA110 THR A 102 SER A 111 1 O ILE A 104 N ALA A 20 SHEET 6 AA110 LYS A 218 TYR A 228 1 O VAL A 224 N ASN A 107 SHEET 7 AA110 VAL A 121 ASN A 129 -1 N MSE A 122 O SER A 223 SHEET 8 AA110 SER A 172 TRP A 178 1 O SER A 172 N VAL A 121 SHEET 9 AA110 ALA A 200 GLY A 202 1 O ALA A 200 N MSE A 177 SHEET 10 AA110 THR A 102 SER A 111 -1 N GLY A 110 O VAL A 201 LINK C ILE A 71 N MSE A 72 1555 1555 1.33 LINK C MSE A 72 N LEU A 73 1555 1555 1.32 LINK C ALA A 87 N MSE A 88 1555 1555 1.33 LINK C MSE A 88 N ARG A 89 1555 1555 1.33 LINK C ASP A 115 N MSE A 116 1555 1555 1.34 LINK C MSE A 116 N PRO A 117 1555 1555 1.34 LINK C VAL A 121 N MSE A 122 1555 1555 1.34 LINK C MSE A 122 N GLN A 123 1555 1555 1.33 LINK C GLY A 147 N MSE A 148 1555 1555 1.33 LINK C MSE A 148 N THR A 149 1555 1555 1.32 LINK C ALA A 159 N MSE A 160 1555 1555 1.33 LINK C MSE A 160 N ARG A 161 1555 1555 1.33 LINK C TYR A 176 N MSE A 177 1555 1555 1.32 LINK C MSE A 177 N TRP A 178 1555 1555 1.33 LINK C ARG A 191 N MSE A 192 1555 1555 1.33 LINK C MSE A 192 N ALA A 193 1555 1555 1.33 LINK C GLY A 202 N MSE A 203 1555 1555 1.33 LINK C MSE A 203 N SER A 204 1555 1555 1.33 LINK C GLY A 231 N MSE A 232 1555 1555 1.33 LINK C MSE A 232 N THR A 233 1555 1555 1.34 LINK C ASP A 244 N MSE A 245 1555 1555 1.33 LINK C MSE A 245 N ALA A 246 1555 1555 1.34 LINK C ARG A 259 N MSE A 260 1555 1555 1.33 LINK C MSE A 260 N ILE A 261 1555 1555 1.33 CISPEP 1 GLY A 181 PRO A 182 0 7.35 SITE 1 AC1 9 ALA A 108 ALA A 109 GLY A 110 GLU A 185 SITE 2 AC1 9 VAL A 201 GLY A 202 MSE A 203 THR A 226 SITE 3 AC1 9 ASN A 227 CRYST1 97.881 97.881 46.356 90.00 90.00 120.00 P 63 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010216 0.005898 0.000000 0.00000 SCALE2 0.000000 0.011797 0.000000 0.00000 SCALE3 0.000000 0.000000 0.021572 0.00000