HEADER OXIDOREDUCTASE 17-JUL-12 4G5D TITLE X-RAY CRYSTAL STRUCTURE OF PROSTAGLANDIN F SYNTHASE FROM LEISHMANIA TITLE 2 MAJOR FRIEDLIN BOUND TO NADPH COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROSTAGLANDIN F2-ALPHA SYNTHASE/D-ARABINOSE DEHYDROGENASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PROSTAGLANDIN F SYNTHASE; COMPND 5 EC: 1.1.1.188; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LEISHMANIA MAJOR; SOURCE 3 ORGANISM_TAXID: 347515; SOURCE 4 STRAIN: FRIEDLIN; SOURCE 5 GENE: PGFS, LMJF_31_2150; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS STRUCTURAL GENOMICS, NIAID, NATIONAL INSTITUTE OF ALLERGY AND KEYWDS 2 INFECTIOUS DISEASES, SEATTLE STRUCTURAL GENOMICS CENTER FOR KEYWDS 3 INFECTIOUS DISEASE, SSGCID, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 4 13-SEP-23 4G5D 1 REMARK SEQADV REVDAT 3 03-JUN-15 4G5D 1 JRNL REVDAT 2 13-MAY-15 4G5D 1 JRNL REVDAT 1 15-AUG-12 4G5D 0 JRNL AUTH S.O.MOEN,J.W.FAIRMAN,S.R.BARNES,A.SULLIVAN, JRNL AUTH 2 S.NAKAZAWA-HEWITT,W.C.VAN VOORHIS,B.L.STAKER,D.D.LORIMER, JRNL AUTH 3 P.J.MYLER,T.E.EDWARDS JRNL TITL STRUCTURES OF PROSTAGLANDIN F SYNTHASE FROM THE PROTOZOA JRNL TITL 2 LEISHMANIA MAJOR AND TRYPANOSOMA CRUZI WITH NADP. JRNL REF ACTA CRYSTALLOGR F STRUCT V. 71 609 2015 JRNL REF 2 BIOL COMMUN JRNL REFN ESSN 1744-3091 JRNL PMID 25945716 JRNL DOI 10.1107/S2053230X15006883 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8_1069 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : MLHL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.19 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.5 REMARK 3 NUMBER OF REFLECTIONS : 61405 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.218 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 3097 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.2041 - 5.0417 1.00 2907 161 0.1888 0.1930 REMARK 3 2 5.0417 - 4.0024 1.00 2823 148 0.1520 0.1809 REMARK 3 3 4.0024 - 3.4967 1.00 2762 154 0.1587 0.1816 REMARK 3 4 3.4967 - 3.1771 1.00 2778 150 0.1607 0.2212 REMARK 3 5 3.1771 - 2.9494 1.00 2781 143 0.1735 0.2222 REMARK 3 6 2.9494 - 2.7755 1.00 2766 137 0.1726 0.2201 REMARK 3 7 2.7755 - 2.6366 1.00 2725 150 0.1715 0.2374 REMARK 3 8 2.6366 - 2.5218 1.00 2734 153 0.1736 0.2359 REMARK 3 9 2.5218 - 2.4247 0.99 2721 143 0.1745 0.2236 REMARK 3 10 2.4247 - 2.3411 1.00 2750 130 0.1713 0.2633 REMARK 3 11 2.3411 - 2.2679 0.99 2723 133 0.1694 0.2037 REMARK 3 12 2.2679 - 2.2030 1.00 2699 151 0.1686 0.2205 REMARK 3 13 2.2030 - 2.1450 0.98 2672 138 0.1636 0.2266 REMARK 3 14 2.1450 - 2.0927 0.98 2682 152 0.1674 0.2143 REMARK 3 15 2.0927 - 2.0451 0.98 2654 139 0.1707 0.1872 REMARK 3 16 2.0451 - 2.0016 0.94 2573 153 0.1700 0.2153 REMARK 3 17 2.0016 - 1.9616 0.93 2559 107 0.1851 0.2623 REMARK 3 18 1.9616 - 1.9245 0.93 2498 129 0.1884 0.2712 REMARK 3 19 1.9245 - 1.8902 0.88 2391 144 0.1959 0.2323 REMARK 3 20 1.8902 - 1.8581 0.89 2413 120 0.1893 0.2676 REMARK 3 21 1.8581 - 1.8282 0.89 2390 131 0.2107 0.2246 REMARK 3 22 1.8282 - 1.8000 0.85 2307 131 0.2219 0.2890 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.540 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 17.59 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 14.45 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 4645 REMARK 3 ANGLE : 1.332 6344 REMARK 3 CHIRALITY : 0.083 703 REMARK 3 PLANARITY : 0.006 809 REMARK 3 DIHEDRAL : 16.616 1698 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 3:32) REMARK 3 ORIGIN FOR THE GROUP (A): 34.8503 1.4954 20.3713 REMARK 3 T TENSOR REMARK 3 T11: 0.0627 T22: 0.0733 REMARK 3 T33: 0.0838 T12: 0.0014 REMARK 3 T13: 0.0034 T23: 0.0097 REMARK 3 L TENSOR REMARK 3 L11: 1.5846 L22: 1.0314 REMARK 3 L33: 1.1098 L12: -0.5451 REMARK 3 L13: -0.3302 L23: 0.3660 REMARK 3 S TENSOR REMARK 3 S11: -0.0654 S12: 0.0085 S13: -0.1196 REMARK 3 S21: 0.1095 S22: 0.0140 S23: 0.2767 REMARK 3 S31: 0.0223 S32: -0.0959 S33: 0.0572 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 33:58) REMARK 3 ORIGIN FOR THE GROUP (A): 31.8915 6.7069 27.0163 REMARK 3 T TENSOR REMARK 3 T11: 0.0789 T22: 0.1063 REMARK 3 T33: 0.1201 T12: 0.0148 REMARK 3 T13: 0.0526 T23: -0.0042 REMARK 3 L TENSOR REMARK 3 L11: 2.7127 L22: 0.4525 REMARK 3 L33: 0.6902 L12: 0.5282 REMARK 3 L13: -0.3994 L23: -0.5463 REMARK 3 S TENSOR REMARK 3 S11: 0.0596 S12: -0.2739 S13: 0.0622 REMARK 3 S21: 0.1988 S22: -0.0922 S23: 0.1406 REMARK 3 S31: -0.0639 S32: -0.1854 S33: 0.0041 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 59:184) REMARK 3 ORIGIN FOR THE GROUP (A): 48.6441 5.0251 22.2429 REMARK 3 T TENSOR REMARK 3 T11: 0.0518 T22: 0.0458 REMARK 3 T33: 0.0361 T12: 0.0032 REMARK 3 T13: 0.0006 T23: 0.0059 REMARK 3 L TENSOR REMARK 3 L11: 1.0770 L22: 0.9842 REMARK 3 L33: 0.7470 L12: -0.1021 REMARK 3 L13: 0.2409 L23: 0.0605 REMARK 3 S TENSOR REMARK 3 S11: 0.0363 S12: -0.1047 S13: -0.0205 REMARK 3 S21: 0.1103 S22: -0.0122 S23: -0.0025 REMARK 3 S31: -0.0002 S32: -0.0099 S33: -0.0026 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 185:253) REMARK 3 ORIGIN FOR THE GROUP (A): 30.8131 5.8070 9.2549 REMARK 3 T TENSOR REMARK 3 T11: 0.0618 T22: 0.1134 REMARK 3 T33: 0.0841 T12: -0.0073 REMARK 3 T13: -0.0053 T23: 0.0107 REMARK 3 L TENSOR REMARK 3 L11: 1.0213 L22: 0.8245 REMARK 3 L33: 0.8428 L12: -0.0518 REMARK 3 L13: 0.0361 L23: -0.0569 REMARK 3 S TENSOR REMARK 3 S11: -0.0227 S12: 0.1517 S13: 0.0702 REMARK 3 S21: -0.0557 S22: 0.0180 S23: 0.1129 REMARK 3 S31: 0.0262 S32: -0.2183 S33: 0.0031 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 254:284) REMARK 3 ORIGIN FOR THE GROUP (A): 37.1132 9.8324 3.7283 REMARK 3 T TENSOR REMARK 3 T11: 0.0895 T22: 0.0571 REMARK 3 T33: 0.0526 T12: 0.0193 REMARK 3 T13: -0.0011 T23: -0.0073 REMARK 3 L TENSOR REMARK 3 L11: 1.4353 L22: 0.7713 REMARK 3 L33: 1.4820 L12: -0.2299 REMARK 3 L13: 0.0161 L23: -0.1120 REMARK 3 S TENSOR REMARK 3 S11: 0.0016 S12: 0.2093 S13: -0.0215 REMARK 3 S21: -0.0386 S22: 0.0345 S23: 0.0560 REMARK 3 S31: 0.1147 S32: -0.0640 S33: -0.0399 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN B AND RESID 3:33) REMARK 3 ORIGIN FOR THE GROUP (A): -1.4466 1.9776 30.4189 REMARK 3 T TENSOR REMARK 3 T11: 0.0809 T22: 0.0447 REMARK 3 T33: 0.0865 T12: 0.0125 REMARK 3 T13: 0.0148 T23: -0.0063 REMARK 3 L TENSOR REMARK 3 L11: 1.0226 L22: 1.0971 REMARK 3 L33: 0.9832 L12: 0.6725 REMARK 3 L13: -0.2314 L23: -0.5474 REMARK 3 S TENSOR REMARK 3 S11: 0.0169 S12: -0.0019 S13: -0.1142 REMARK 3 S21: 0.0036 S22: -0.0804 S23: -0.1491 REMARK 3 S31: 0.0056 S32: 0.1425 S33: 0.0562 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN B AND RESID 34:119) REMARK 3 ORIGIN FOR THE GROUP (A): -8.2342 6.3018 23.8030 REMARK 3 T TENSOR REMARK 3 T11: 0.0834 T22: 0.0712 REMARK 3 T33: 0.0424 T12: 0.0042 REMARK 3 T13: 0.0082 T23: -0.0021 REMARK 3 L TENSOR REMARK 3 L11: 1.5514 L22: 0.9001 REMARK 3 L33: 0.8997 L12: 0.0659 REMARK 3 L13: 0.0528 L23: -0.1718 REMARK 3 S TENSOR REMARK 3 S11: 0.0057 S12: 0.1926 S13: -0.0504 REMARK 3 S21: -0.1500 S22: -0.0144 S23: -0.0371 REMARK 3 S31: 0.0240 S32: 0.0768 S33: -0.0010 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN B AND RESID 120:184) REMARK 3 ORIGIN FOR THE GROUP (A): -18.4804 4.8754 36.1417 REMARK 3 T TENSOR REMARK 3 T11: 0.0536 T22: 0.0342 REMARK 3 T33: 0.0447 T12: 0.0047 REMARK 3 T13: 0.0053 T23: 0.0134 REMARK 3 L TENSOR REMARK 3 L11: 1.4744 L22: 1.0601 REMARK 3 L33: 0.9091 L12: 0.0596 REMARK 3 L13: 0.3832 L23: 0.0068 REMARK 3 S TENSOR REMARK 3 S11: 0.0259 S12: -0.0287 S13: -0.0271 REMARK 3 S21: -0.0665 S22: -0.0174 S23: 0.0514 REMARK 3 S31: -0.0589 S32: -0.0948 S33: -0.0215 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN B AND RESID 185:248) REMARK 3 ORIGIN FOR THE GROUP (A): 3.1162 6.3488 41.5973 REMARK 3 T TENSOR REMARK 3 T11: 0.0611 T22: 0.0994 REMARK 3 T33: 0.0731 T12: 0.0000 REMARK 3 T13: -0.0079 T23: 0.0005 REMARK 3 L TENSOR REMARK 3 L11: 1.2831 L22: 0.7510 REMARK 3 L33: 0.6586 L12: -0.0049 REMARK 3 L13: 0.0339 L23: 0.0160 REMARK 3 S TENSOR REMARK 3 S11: 0.0563 S12: -0.1385 S13: -0.0245 REMARK 3 S21: 0.0303 S22: -0.0469 S23: -0.1475 REMARK 3 S31: 0.0225 S32: 0.2162 S33: -0.0163 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: (CHAIN B AND RESID 249:284) REMARK 3 ORIGIN FOR THE GROUP (A): -0.6346 9.4248 45.9815 REMARK 3 T TENSOR REMARK 3 T11: 0.0733 T22: 0.0581 REMARK 3 T33: 0.0804 T12: 0.0039 REMARK 3 T13: -0.0055 T23: 0.0156 REMARK 3 L TENSOR REMARK 3 L11: 0.7146 L22: 0.2813 REMARK 3 L33: 1.3495 L12: 0.3579 REMARK 3 L13: 0.0701 L23: 0.3112 REMARK 3 S TENSOR REMARK 3 S11: -0.0323 S12: -0.1239 S13: -0.0869 REMARK 3 S21: 0.0549 S22: 0.0641 S23: -0.0358 REMARK 3 S31: 0.1236 S32: 0.1527 S33: -0.0336 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4G5D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-JUL-12. REMARK 100 THE DEPOSITION ID IS D_1000073758. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-JUL-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-E+ SUPERBRIGHT REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN 944+ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XSCALE REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 61422 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.5 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.09600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.3600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 86.7 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.51500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.620 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4F40 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.59 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.65 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: JCSG+ B8: 10% PEG8000, 200 MM REMARK 280 MAGNESIUM CHLORIDE, 100 MM TRIS, PH 7.0, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 17.29500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 PRO A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 GLY B -3 REMARK 465 PRO B -2 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 6 CG CD CE NZ REMARK 470 GLU A 72 CG CD OE1 OE2 REMARK 470 LYS A 122 CG CD CE NZ REMARK 470 LYS A 204 CG CD CE NZ REMARK 470 ASN A 219 CG OD1 ND2 REMARK 470 GLU A 245 CG CD OE1 OE2 REMARK 470 GLU A 261 CG CD OE1 OE2 REMARK 470 LYS B 6 CG CD CE NZ REMARK 470 LYS B 55 CG CD CE NZ REMARK 470 GLU B 72 CG CD OE1 OE2 REMARK 470 GLU B 96 CG CD OE1 OE2 REMARK 470 GLN B 99 CG CD OE1 NE2 REMARK 470 LYS B 122 CG CD CE NZ REMARK 470 LYS B 139 CG CD CE NZ REMARK 470 LYS B 204 CG CD CE NZ REMARK 470 GLU B 257 CG CD OE1 OE2 REMARK 470 GLU B 261 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 548 O HOH A 727 2.11 REMARK 500 O HOH B 561 O HOH B 647 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 676 O HOH B 711 1655 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 50 -167.90 -126.81 REMARK 500 ARG A 115 147.22 85.41 REMARK 500 SER A 198 49.21 39.73 REMARK 500 GLN A 283 50.57 -100.01 REMARK 500 THR B 50 -167.16 -128.58 REMARK 500 ARG B 115 150.73 84.03 REMARK 500 GLN B 283 46.17 -96.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NDP A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NDP B 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4F40 RELATED DB: PDB REMARK 900 LEISHMANIA MAJOR FRIEDLIN PROSTAGLANDIN F SYNTHASE, APO VERSION REMARK 900 RELATED ID: SSGCID-LEMAA.00019.A RELATED DB: TARGETTRACK DBREF 4G5D A 1 284 UNP Q4Q646 Q4Q646_LEIMA 1 284 DBREF 4G5D B 1 284 UNP Q4Q646 Q4Q646_LEIMA 1 284 SEQADV 4G5D GLY A -3 UNP Q4Q646 EXPRESSION TAG SEQADV 4G5D PRO A -2 UNP Q4Q646 EXPRESSION TAG SEQADV 4G5D GLY A -1 UNP Q4Q646 EXPRESSION TAG SEQADV 4G5D SER A 0 UNP Q4Q646 EXPRESSION TAG SEQADV 4G5D GLY B -3 UNP Q4Q646 EXPRESSION TAG SEQADV 4G5D PRO B -2 UNP Q4Q646 EXPRESSION TAG SEQADV 4G5D GLY B -1 UNP Q4Q646 EXPRESSION TAG SEQADV 4G5D SER B 0 UNP Q4Q646 EXPRESSION TAG SEQRES 1 A 288 GLY PRO GLY SER MET ALA GLY VAL ASP LYS ALA MET VAL SEQRES 2 A 288 THR LEU SER ASN GLY VAL LYS MET PRO GLN PHE GLY LEU SEQRES 3 A 288 GLY VAL TRP GLN SER PRO ALA GLY GLU VAL THR GLU ASN SEQRES 4 A 288 ALA VAL LYS TRP ALA LEU CYS ALA GLY TYR ARG HIS ILE SEQRES 5 A 288 ASP THR ALA ALA ILE TYR LYS ASN GLU GLU SER VAL GLY SEQRES 6 A 288 ALA GLY LEU ARG ALA SER GLY VAL PRO ARG GLU ASP VAL SEQRES 7 A 288 PHE ILE THR THR LYS LEU TRP ASN THR GLU GLN GLY TYR SEQRES 8 A 288 GLU SER THR LEU ALA ALA PHE GLU GLU SER ARG GLN LYS SEQRES 9 A 288 LEU GLY VAL ASP TYR ILE ASP LEU TYR LEU ILE HIS TRP SEQRES 10 A 288 PRO ARG GLY LYS ASP ILE LEU SER LYS GLU GLY LYS LYS SEQRES 11 A 288 TYR LEU ASP SER TRP ARG ALA PHE GLU GLN LEU TYR LYS SEQRES 12 A 288 GLU LYS LYS VAL ARG ALA ILE GLY VAL SER ASN PHE HIS SEQRES 13 A 288 ILE HIS HIS LEU GLU ASP VAL LEU ALA MET CYS THR VAL SEQRES 14 A 288 THR PRO MET VAL ASN GLN VAL GLU LEU HIS PRO LEU ASN SEQRES 15 A 288 ASN GLN ALA ASP LEU ARG ALA PHE CYS ASP ALA LYS GLN SEQRES 16 A 288 ILE LYS VAL GLU ALA TRP SER PRO LEU GLY GLN GLY LYS SEQRES 17 A 288 LEU LEU SER ASN PRO ILE LEU SER ALA ILE GLY ALA LYS SEQRES 18 A 288 TYR ASN LYS THR ALA ALA GLN VAL ILE LEU ARG TRP ASN SEQRES 19 A 288 ILE GLN LYS ASN LEU ILE THR ILE PRO LYS SER VAL HIS SEQRES 20 A 288 ARG GLU ARG ILE GLU GLU ASN ALA ASP ILE PHE ASP PHE SEQRES 21 A 288 GLU LEU GLY ALA GLU ASP VAL MET SER ILE ASP ALA LEU SEQRES 22 A 288 ASN THR ASN SER ARG TYR GLY PRO ASP PRO ASP GLU ALA SEQRES 23 A 288 GLN PHE SEQRES 1 B 288 GLY PRO GLY SER MET ALA GLY VAL ASP LYS ALA MET VAL SEQRES 2 B 288 THR LEU SER ASN GLY VAL LYS MET PRO GLN PHE GLY LEU SEQRES 3 B 288 GLY VAL TRP GLN SER PRO ALA GLY GLU VAL THR GLU ASN SEQRES 4 B 288 ALA VAL LYS TRP ALA LEU CYS ALA GLY TYR ARG HIS ILE SEQRES 5 B 288 ASP THR ALA ALA ILE TYR LYS ASN GLU GLU SER VAL GLY SEQRES 6 B 288 ALA GLY LEU ARG ALA SER GLY VAL PRO ARG GLU ASP VAL SEQRES 7 B 288 PHE ILE THR THR LYS LEU TRP ASN THR GLU GLN GLY TYR SEQRES 8 B 288 GLU SER THR LEU ALA ALA PHE GLU GLU SER ARG GLN LYS SEQRES 9 B 288 LEU GLY VAL ASP TYR ILE ASP LEU TYR LEU ILE HIS TRP SEQRES 10 B 288 PRO ARG GLY LYS ASP ILE LEU SER LYS GLU GLY LYS LYS SEQRES 11 B 288 TYR LEU ASP SER TRP ARG ALA PHE GLU GLN LEU TYR LYS SEQRES 12 B 288 GLU LYS LYS VAL ARG ALA ILE GLY VAL SER ASN PHE HIS SEQRES 13 B 288 ILE HIS HIS LEU GLU ASP VAL LEU ALA MET CYS THR VAL SEQRES 14 B 288 THR PRO MET VAL ASN GLN VAL GLU LEU HIS PRO LEU ASN SEQRES 15 B 288 ASN GLN ALA ASP LEU ARG ALA PHE CYS ASP ALA LYS GLN SEQRES 16 B 288 ILE LYS VAL GLU ALA TRP SER PRO LEU GLY GLN GLY LYS SEQRES 17 B 288 LEU LEU SER ASN PRO ILE LEU SER ALA ILE GLY ALA LYS SEQRES 18 B 288 TYR ASN LYS THR ALA ALA GLN VAL ILE LEU ARG TRP ASN SEQRES 19 B 288 ILE GLN LYS ASN LEU ILE THR ILE PRO LYS SER VAL HIS SEQRES 20 B 288 ARG GLU ARG ILE GLU GLU ASN ALA ASP ILE PHE ASP PHE SEQRES 21 B 288 GLU LEU GLY ALA GLU ASP VAL MET SER ILE ASP ALA LEU SEQRES 22 B 288 ASN THR ASN SER ARG TYR GLY PRO ASP PRO ASP GLU ALA SEQRES 23 B 288 GLN PHE HET NDP A 301 48 HET NDP B 301 48 HETNAM NDP NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM 2 NDP PHOSPHATE FORMUL 3 NDP 2(C21 H30 N7 O17 P3) FORMUL 5 HOH *860(H2 O) HELIX 1 1 GLY A 30 ALA A 43 1 14 HELIX 2 2 ALA A 51 LYS A 55 5 5 HELIX 3 3 ASN A 56 GLY A 68 1 13 HELIX 4 4 PRO A 70 VAL A 74 5 5 HELIX 5 5 TRP A 81 GLN A 85 5 5 HELIX 6 6 GLY A 86 GLY A 102 1 17 HELIX 7 7 GLY A 116 GLY A 124 1 9 HELIX 8 8 LYS A 125 GLU A 140 1 16 HELIX 9 9 HIS A 152 ALA A 161 1 10 HELIX 10 10 GLN A 180 LYS A 190 1 11 HELIX 11 11 LEU A 200 LYS A 204 5 5 HELIX 12 12 ASN A 208 TYR A 218 1 11 HELIX 13 13 THR A 221 LYS A 233 1 13 HELIX 14 14 HIS A 243 ASP A 252 1 10 HELIX 15 15 GLY A 259 ALA A 268 1 10 HELIX 16 16 GLY B 30 GLY B 44 1 15 HELIX 17 17 ALA B 51 LYS B 55 5 5 HELIX 18 18 ASN B 56 SER B 67 1 12 HELIX 19 19 PRO B 70 VAL B 74 5 5 HELIX 20 20 TRP B 81 GLN B 85 5 5 HELIX 21 21 GLY B 86 GLY B 102 1 17 HELIX 22 22 GLY B 116 GLY B 124 1 9 HELIX 23 23 LYS B 125 GLU B 140 1 16 HELIX 24 24 HIS B 152 ALA B 161 1 10 HELIX 25 25 GLN B 180 LYS B 190 1 11 HELIX 26 26 LEU B 200 LYS B 204 5 5 HELIX 27 27 ASN B 208 TYR B 218 1 11 HELIX 28 28 THR B 221 LYS B 233 1 13 HELIX 29 29 HIS B 243 ASP B 252 1 10 HELIX 30 30 GLY B 259 ALA B 268 1 10 SHEET 1 A 2 MET A 8 THR A 10 0 SHEET 2 A 2 LYS A 16 PRO A 18 -1 O MET A 17 N VAL A 9 SHEET 1 B 8 LEU A 22 GLY A 23 0 SHEET 2 B 8 HIS A 47 ASP A 49 1 O ASP A 49 N LEU A 22 SHEET 3 B 8 PHE A 75 LEU A 80 1 O THR A 77 N ILE A 48 SHEET 4 B 8 ILE A 106 ILE A 111 1 O LEU A 110 N LEU A 80 SHEET 5 B 8 VAL A 143 SER A 149 1 O GLY A 147 N TYR A 109 SHEET 6 B 8 VAL A 169 GLU A 173 1 O VAL A 169 N VAL A 148 SHEET 7 B 8 LYS A 193 TRP A 197 1 O TRP A 197 N VAL A 172 SHEET 8 B 8 ILE A 236 THR A 237 1 O ILE A 236 N ALA A 196 SHEET 1 C 2 MET B 8 THR B 10 0 SHEET 2 C 2 LYS B 16 PRO B 18 -1 O MET B 17 N VAL B 9 SHEET 1 D 8 LEU B 22 GLY B 23 0 SHEET 2 D 8 HIS B 47 ASP B 49 1 O ASP B 49 N LEU B 22 SHEET 3 D 8 PHE B 75 LEU B 80 1 O THR B 77 N ILE B 48 SHEET 4 D 8 ILE B 106 ILE B 111 1 O LEU B 110 N LEU B 80 SHEET 5 D 8 VAL B 143 SER B 149 1 O GLY B 147 N TYR B 109 SHEET 6 D 8 VAL B 169 GLU B 173 1 O VAL B 169 N VAL B 148 SHEET 7 D 8 LYS B 193 TRP B 197 1 O TRP B 197 N VAL B 172 SHEET 8 D 8 ILE B 236 THR B 237 1 O ILE B 236 N ALA B 196 SITE 1 AC1 35 GLY A 23 VAL A 24 TRP A 25 ASP A 49 SITE 2 AC1 35 TYR A 54 HIS A 112 TRP A 113 SER A 149 SITE 3 AC1 35 ASN A 150 GLN A 171 TRP A 197 SER A 198 SITE 4 AC1 35 PRO A 199 LEU A 200 GLY A 201 GLN A 202 SITE 5 AC1 35 GLY A 203 LEU A 206 ILE A 238 PRO A 239 SITE 6 AC1 35 LYS A 240 SER A 241 VAL A 242 HIS A 243 SITE 7 AC1 35 ARG A 246 GLU A 249 ASN A 250 HOH A 427 SITE 8 AC1 35 HOH A 434 HOH A 436 HOH A 437 HOH A 439 SITE 9 AC1 35 HOH A 440 HOH A 546 HOH A 573 SITE 1 AC2 37 GLY B 23 VAL B 24 TRP B 25 ASP B 49 SITE 2 AC2 37 TYR B 54 LYS B 79 HIS B 112 SER B 149 SITE 3 AC2 37 ASN B 150 GLN B 171 TRP B 197 SER B 198 SITE 4 AC2 37 PRO B 199 LEU B 200 GLY B 201 GLN B 202 SITE 5 AC2 37 GLY B 203 LEU B 206 ALA B 223 ILE B 238 SITE 6 AC2 37 PRO B 239 LYS B 240 SER B 241 VAL B 242 SITE 7 AC2 37 HIS B 243 ARG B 246 GLU B 249 ASN B 250 SITE 8 AC2 37 HOH B 437 HOH B 440 HOH B 441 HOH B 564 SITE 9 AC2 37 HOH B 568 HOH B 586 HOH B 599 HOH B 632 SITE 10 AC2 37 HOH B 786 CRYST1 94.660 34.590 106.950 90.00 102.98 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010564 0.000000 0.002435 0.00000 SCALE2 0.000000 0.028910 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009595 0.00000