HEADER HYDROLASE 04-JUN-12 4FGM TITLE CRYSTAL STRUCTURE OF THE AMINOPEPTIDASE N FAMILY PROTEIN Q5QTY1 FROM TITLE 2 IDIOMARINA LOIHIENSIS. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TITLE 3 TARGET ILR60. COMPND MOL_ID: 1; COMPND 2 MOLECULE: AMINOPEPTIDASE N FAMILY PROTEIN; COMPND 3 CHAIN: A; COMPND 4 EC: 3.4.11.2; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: IDIOMARINA LOIHIENSIS L2TR; SOURCE 3 ORGANISM_TAXID: 283942; SOURCE 4 STRAIN: ATCC BAA-735 / DSM 15497 / L2-TR; SOURCE 5 GENE: IL1258; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)+MAGIC; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET21_NESG, ILR60-21.5 KEYWDS STRUCTURAL GENOMICS, PSI-BIOLOGY, NORTHEAST STRUCTURAL GENOMICS KEYWDS 2 CONSORTIUM, NESG, PEPTIDASE_M61, PDZ, PDZ_2, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR S.VOROBIEV,M.SU,T.TONG,E.KOHAN,D.WANG,J.K.EVERETT,T.B.ACTON, AUTHOR 2 G.T.MONTELIONE,L.TONG,J.F.HUNT,NORTHEAST STRUCTURAL GENOMICS AUTHOR 3 CONSORTIUM (NESG) REVDAT 2 25-OCT-17 4FGM 1 REMARK REVDAT 1 01-AUG-12 4FGM 0 JRNL AUTH S.VOROBIEV,M.SU,T.TONG,E.KOHAN,D.WANG,J.K.EVERETT,T.B.ACTON, JRNL AUTH 2 G.T.MONTELIONE,L.TONG,J.F.HUNT JRNL TITL CRYSTAL STRUCTURE OF THE AMINOPEPTIDASE N FAMILY PROTEIN JRNL TITL 2 Q5QTY1 FROM IDIOMARINA LOIHIENSIS. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.39 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.7.2_869 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.39 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.33 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.380 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 69442 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 3489 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.3320 - 6.9900 1.00 2657 130 0.1970 0.1770 REMARK 3 2 6.9900 - 5.5520 1.00 2628 161 0.1920 0.1990 REMARK 3 3 5.5520 - 4.8520 1.00 2642 138 0.1490 0.1880 REMARK 3 4 4.8520 - 4.4090 1.00 2643 111 0.1330 0.1440 REMARK 3 5 4.4090 - 4.0930 1.00 2679 130 0.1500 0.1890 REMARK 3 6 4.0930 - 3.8520 1.00 2610 132 0.1640 0.1490 REMARK 3 7 3.8520 - 3.6590 1.00 2641 169 0.1770 0.1950 REMARK 3 8 3.6590 - 3.5000 1.00 2628 139 0.1800 0.1950 REMARK 3 9 3.5000 - 3.3650 1.00 2634 144 0.1970 0.2200 REMARK 3 10 3.3650 - 3.2490 1.00 2600 158 0.1910 0.2220 REMARK 3 11 3.2490 - 3.1470 1.00 2670 115 0.2100 0.2280 REMARK 3 12 3.1470 - 3.0570 1.00 2625 158 0.1980 0.2310 REMARK 3 13 3.0570 - 2.9770 1.00 2656 124 0.1980 0.2080 REMARK 3 14 2.9770 - 2.9040 1.00 2632 133 0.2180 0.2740 REMARK 3 15 2.9040 - 2.8380 1.00 2671 130 0.2110 0.2290 REMARK 3 16 2.8380 - 2.7780 1.00 2608 152 0.2190 0.3110 REMARK 3 17 2.7780 - 2.7220 1.00 2604 160 0.2290 0.2700 REMARK 3 18 2.7220 - 2.6710 1.00 2645 156 0.2540 0.2890 REMARK 3 19 2.6710 - 2.6230 1.00 2641 122 0.2510 0.3050 REMARK 3 20 2.6230 - 2.5790 1.00 2663 125 0.2490 0.2230 REMARK 3 21 2.5790 - 2.5370 1.00 2617 126 0.2480 0.2700 REMARK 3 22 2.5370 - 2.4980 1.00 2649 163 0.2670 0.2710 REMARK 3 23 2.4980 - 2.4610 1.00 2649 122 0.2860 0.3360 REMARK 3 24 2.4610 - 2.4270 1.00 2633 152 0.2960 0.2690 REMARK 3 25 2.4270 - 2.3940 1.00 2628 139 0.3330 0.3560 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.98 REMARK 3 K_SOL : 0.33 REMARK 3 B_SOL : 40.97 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.680 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.600 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 49.99 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 51.71 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.12000 REMARK 3 B22 (A**2) : 2.12000 REMARK 3 B33 (A**2) : -4.23900 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 4841 REMARK 3 ANGLE : 1.387 6580 REMARK 3 CHIRALITY : 0.104 717 REMARK 3 PLANARITY : 0.007 844 REMARK 3 DIHEDRAL : 15.504 1742 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4FGM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-JUN-12. REMARK 100 THE DEPOSITION ID IS D_1000072875. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-MAY-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97900 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : 2.394 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 11.70 REMARK 200 R MERGE (I) : 0.11500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 27.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 11.70 REMARK 200 R MERGE FOR SHELL (I) : 0.97800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.050 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXDE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.94 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN SOLUTION: 100MM NACL, 5MM DTT, REMARK 280 0.02% NAN3, 10MM TRIS-HCL (PH 7.5). RESERVOIR SOLUTION: 45% PEG/ REMARK 280 TACSIMATE PH 6.8 (HAMPTON RESEARCH HR2-092), 45% SILVER BULLET REMARK 280 (HAMPTON RESEARCH HR2-096, G11), 0.1 M SODIUM CITRATE., REMARK 280 MICROBATCH CRYSTALLIZATION UNDER OIL, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 62 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+2/3 REMARK 290 6555 X-Y,X,Z+1/3 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+2/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 146.75600 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 73.37800 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 146.75600 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 73.37800 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 146.75600 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 73.37800 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 146.75600 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 73.37800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: MONOMER ACCORDING TO AGGREGATION SCREENING REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 16320 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 81470 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -160.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 119.65700 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 220.13400 REMARK 350 BIOMT1 4 -1.000000 0.000000 0.000000 119.65700 REMARK 350 BIOMT2 4 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 220.13400 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 588 REMARK 465 GLY A 589 REMARK 465 LEU A 590 REMARK 465 GLU A 591 REMARK 465 HIS A 592 REMARK 465 HIS A 593 REMARK 465 HIS A 594 REMARK 465 HIS A 595 REMARK 465 HIS A 596 REMARK 465 HIS A 597 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 477 CG CD CE NZ REMARK 470 GLU A 480 CG CD OE1 OE2 REMARK 470 GLN A 481 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 96 -77.62 -122.16 REMARK 500 ALA A 97 140.38 -179.20 REMARK 500 ALA A 133 59.25 -153.54 REMARK 500 PRO A 149 -35.08 -37.70 REMARK 500 ILE A 281 -27.25 107.29 REMARK 500 LEU A 357 30.88 -98.65 REMARK 500 THR A 360 -66.69 -122.53 REMARK 500 ASN A 366 -155.63 -135.14 REMARK 500 ARG A 553 -126.08 57.62 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 602 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 277 NE2 REMARK 620 2 GLU A 307 OE1 102.5 REMARK 620 3 HIS A 273 NE2 95.0 109.3 REMARK 620 4 MAE A 601 O2 100.9 136.9 104.1 REMARK 620 5 MAE A 601 O1 129.3 85.2 130.0 52.1 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MAE A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 602 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NESG-ILR60 RELATED DB: TARGETTRACK DBREF 4FGM A 1 589 UNP Q5QTY1 Q5QTY1_IDILO 1 589 SEQADV 4FGM LEU A 590 UNP Q5QTY1 EXPRESSION TAG SEQADV 4FGM GLU A 591 UNP Q5QTY1 EXPRESSION TAG SEQADV 4FGM HIS A 592 UNP Q5QTY1 EXPRESSION TAG SEQADV 4FGM HIS A 593 UNP Q5QTY1 EXPRESSION TAG SEQADV 4FGM HIS A 594 UNP Q5QTY1 EXPRESSION TAG SEQADV 4FGM HIS A 595 UNP Q5QTY1 EXPRESSION TAG SEQADV 4FGM HIS A 596 UNP Q5QTY1 EXPRESSION TAG SEQADV 4FGM HIS A 597 UNP Q5QTY1 EXPRESSION TAG SEQRES 1 A 597 MSE ILE ALA TYR ASP ILE THR PRO ILE ASP LEU HIS GLY SEQRES 2 A 597 HIS LEU PHE ASN VAL SER LEU THR ILE GLU GLN THR ASN SEQRES 3 A 597 ASP GLU GLN GLU LEU TRP LEU PRO ASN TRP ILE PRO GLY SEQRES 4 A 597 SER TYR LEU ILE ARG ASP PHE SER LYS HIS ILE ILE GLY SEQRES 5 A 597 LEU HIS ALA GLU SER ASN GLY LEU SER LEU PRO VAL LYS SEQRES 6 A 597 GLN ILE SER LYS ASN ARG TRP GLN LEU ALA ARG SER LYS SEQRES 7 A 597 HIS PRO VAL THR VAL HIS TYR GLN VAL TYR ALA TRP ASP SEQRES 8 A 597 LEU SER VAL ARG SER ALA TYR LEU ASP GLN PHE GLN GLY SEQRES 9 A 597 PHE PHE ASN ASN THR SER LEU CYS LEU ALA VAL GLU GLY SEQRES 10 A 597 GLN THR ASP LEU PRO CYS GLU LEU HIS LEU HIS ALA PRO SEQRES 11 A 597 PRO GLU ALA PRO LEU TRP LYS VAL ALA THR GLY MSE PRO SEQRES 12 A 597 ARG LYS SER GLY GLN PRO HIS SER TRP GLY CYS PHE ARG SEQRES 13 A 597 ALA ASP ASN TYR ASP ALA LEU ILE ASP TYR PRO PHE LEU SEQRES 14 A 597 ILE GLY ASP LEU THR ILE GLU GLU PHE ILE ALA HIS GLY SEQRES 15 A 597 ILE LYS HIS SER LEU VAL LEU SER GLY ARG HIS TYR ALA SEQRES 16 A 597 ASP THR SER ARG ILE THR ALA ASP LEU ALA LYS ILE CYS SEQRES 17 A 597 GLU THR GLN ILE SER LEU PHE GLU GLU ALA PRO PHE GLN SEQRES 18 A 597 SER TYR THR PHE LEU THR MSE VAL VAL GLY ASN GLY PHE SEQRES 19 A 597 GLY GLY LEU GLU HIS ARG ASN SER THR ALA LEU LEU CYS SEQRES 20 A 597 SER ARG LYS ASP LEU ILE SER ALA HIS GLN TYR GLU MSE SEQRES 21 A 597 ASN ASP ASN TYR GLN THR PHE LEU SER LEU CYS CYS HIS SEQRES 22 A 597 GLU TYR PHE HIS SER TRP ASN ILE LYS THR LEU LYS PRO SEQRES 23 A 597 LYS ALA PHE LEU PRO TYR GLN LEU GLU LYS GLU SER TYR SEQRES 24 A 597 THR GLU GLN LEU TRP PHE TYR GLU GLY MSE THR SER TYR SEQRES 25 A 597 PHE ASP ASP TYR LEU LEU HIS THR SER GLY ILE ILE ASP SEQRES 26 A 597 GLU LYS ARG TYR LEU LYS LEU LEU GLY ASP THR LEU SER SEQRES 27 A 597 ARG VAL GLU ARG GLY ALA GLY GLN TYR GLN GLN SER VAL SEQRES 28 A 597 THR GLU SER SER PHE LEU ALA TRP THR LYS PHE TYR GLN SEQRES 29 A 597 GLN ASN GLU ASN ALA PRO ASN SER ILE VAL SER TYR TYR SEQRES 30 A 597 ALA LYS GLY ALA LEU ILE ALA LEU SER LEU ASP LEU MSE SEQRES 31 A 597 LEU ARG LEU GLN SER ASP HIS LYS LEU THR LEU ALA ARG SEQRES 32 A 597 VAL MSE LYS GLU LEU TRP HIS GLU PHE GLY LYS THR SER SEQRES 33 A 597 ILE GLY THR ALA ASP ASP THR VAL ILE ASN TRP LEU ASN SEQRES 34 A 597 GLN TYR PRO GLY ILE ASP ILE SER ASP PHE LEU LYS ASP SEQRES 35 A 597 ALA LEU TYR ASN LYS GLU SER LEU SER LEU VAL GLU LEU SEQRES 36 A 597 LEU GLN ASN PHE GLY VAL MSE VAL GLN LYS GLN VAL PRO SEQRES 37 A 597 VAL ASP ASP ASN SER VAL GLY GLY LYS ALA SER GLU GLN SEQRES 38 A 597 PRO ALA ARG VAL ASN PHE GLY ALA LYS TYR LYS ALA SER SEQRES 39 A 597 PRO GLN GLY LEU ASP VAL LEU ASN VAL TYR HIS ASP GLU SEQRES 40 A 597 SER ALA TYR HIS ALA GLY LEU SER ALA GLY ASP LYS ILE SEQRES 41 A 597 ILE ALA ILE ASP HIS LEU GLN ALA THR GLU GLN SER VAL SEQRES 42 A 597 LYS ARG ILE LEU GLU ARG TYR ILE PRO GLY ASP THR VAL SEQRES 43 A 597 THR ILE HIS ALA PHE ARG ARG ASP GLU LEU MSE THR LEU SEQRES 44 A 597 GLU LEU THR TRP GLN GLU PRO ALA LYS SER SER TYR VAL SEQRES 45 A 597 LEU SER VAL GLU GLN PRO ASP LYS LEU LYS GLY TRP LEU SEQRES 46 A 597 THR PRO SER GLY LEU GLU HIS HIS HIS HIS HIS HIS MODRES 4FGM MSE A 1 MET SELENOMETHIONINE MODRES 4FGM MSE A 142 MET SELENOMETHIONINE MODRES 4FGM MSE A 228 MET SELENOMETHIONINE MODRES 4FGM MSE A 260 MET SELENOMETHIONINE MODRES 4FGM MSE A 309 MET SELENOMETHIONINE MODRES 4FGM MSE A 390 MET SELENOMETHIONINE MODRES 4FGM MSE A 405 MET SELENOMETHIONINE MODRES 4FGM MSE A 462 MET SELENOMETHIONINE MODRES 4FGM MSE A 557 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 142 8 HET MSE A 228 8 HET MSE A 260 8 HET MSE A 309 8 HET MSE A 390 8 HET MSE A 405 8 HET MSE A 462 8 HET MSE A 557 8 HET MAE A 601 8 HET ZN A 602 1 HETNAM MSE SELENOMETHIONINE HETNAM MAE MALEIC ACID HETNAM ZN ZINC ION FORMUL 1 MSE 9(C5 H11 N O2 SE) FORMUL 2 MAE C4 H4 O4 FORMUL 3 ZN ZN 2+ FORMUL 4 HOH *222(H2 O) HELIX 1 1 ASP A 45 LYS A 48 5 4 HELIX 2 2 ASN A 107 CYS A 112 1 6 HELIX 3 3 ASN A 159 ILE A 164 1 6 HELIX 4 4 ASP A 196 GLU A 216 1 21 HELIX 5 5 LYS A 250 LEU A 252 5 3 HELIX 6 6 ASN A 261 SER A 278 1 18 HELIX 7 7 PRO A 286 LEU A 290 5 5 HELIX 8 8 GLN A 302 GLU A 307 1 6 HELIX 9 9 GLU A 307 SER A 321 1 15 HELIX 10 10 ASP A 325 GLY A 343 1 19 HELIX 11 11 ALA A 344 GLN A 348 5 5 HELIX 12 12 SER A 350 LEU A 357 1 8 HELIX 13 13 ASN A 368 ILE A 373 1 6 HELIX 14 14 TYR A 377 SER A 395 1 19 HELIX 15 15 THR A 400 GLY A 413 1 14 HELIX 16 16 ASP A 422 GLN A 430 1 9 HELIX 17 17 ILE A 436 ASN A 446 1 11 HELIX 18 18 LEU A 452 ASN A 458 1 7 HELIX 19 19 GLU A 507 GLY A 513 1 7 HELIX 20 20 SER A 532 GLU A 538 1 7 HELIX 21 21 GLN A 577 LEU A 581 5 5 SHEET 1 A 7 LEU A 60 LEU A 62 0 SHEET 2 A 7 ILE A 50 SER A 57 -1 N SER A 57 O LEU A 60 SHEET 3 A 7 VAL A 81 TYR A 88 -1 O GLN A 86 N ILE A 51 SHEET 4 A 7 LEU A 15 ILE A 22 -1 N VAL A 18 O TYR A 85 SHEET 5 A 7 ILE A 2 ASP A 10 -1 N THR A 7 O ASN A 17 SHEET 6 A 7 CYS A 123 LEU A 127 1 O HIS A 126 N TYR A 4 SHEET 7 A 7 GLY A 153 ALA A 157 -1 O PHE A 155 N LEU A 125 SHEET 1 B 4 VAL A 64 SER A 68 0 SHEET 2 B 4 ARG A 71 LEU A 74 -1 O GLN A 73 N LYS A 65 SHEET 3 B 4 GLU A 30 TRP A 32 -1 N LEU A 31 O TRP A 72 SHEET 4 B 4 ALA A 114 VAL A 115 -1 O ALA A 114 N TRP A 32 SHEET 1 C 5 TRP A 90 ASP A 91 0 SHEET 2 C 5 ALA A 97 LEU A 99 -1 O ALA A 97 N ASP A 91 SHEET 3 C 5 GLN A 103 PHE A 106 -1 O PHE A 105 N TYR A 98 SHEET 4 C 5 PHE A 168 GLY A 171 -1 O ILE A 170 N GLY A 104 SHEET 5 C 5 LYS A 137 THR A 140 -1 N LYS A 137 O GLY A 171 SHEET 1 D 5 THR A 174 ALA A 180 0 SHEET 2 D 5 ILE A 183 SER A 190 -1 O HIS A 185 N PHE A 178 SHEET 3 D 5 SER A 222 VAL A 230 1 O PHE A 225 N SER A 186 SHEET 4 D 5 SER A 242 SER A 248 1 O LEU A 245 N LEU A 226 SHEET 5 D 5 GLY A 235 GLU A 238 -1 N GLY A 235 O LEU A 246 SHEET 1 E 2 VAL A 461 GLN A 466 0 SHEET 2 E 2 SER A 570 VAL A 575 -1 O SER A 574 N MSE A 462 SHEET 1 F 4 ALA A 489 SER A 494 0 SHEET 2 F 4 GLY A 497 VAL A 503 -1 O ASP A 499 N LYS A 492 SHEET 3 F 4 LYS A 519 ILE A 523 -1 O ILE A 520 N LEU A 498 SHEET 4 F 4 LEU A 526 GLN A 527 -1 O LEU A 526 N ILE A 523 SHEET 1 G 5 ALA A 489 SER A 494 0 SHEET 2 G 5 GLY A 497 VAL A 503 -1 O ASP A 499 N LYS A 492 SHEET 3 G 5 LYS A 519 ILE A 523 -1 O ILE A 520 N LEU A 498 SHEET 4 G 5 THR A 545 ARG A 552 -1 O HIS A 549 N ILE A 521 SHEET 5 G 5 GLU A 555 THR A 562 -1 O MSE A 557 N ALA A 550 LINK C MSE A 1 N ILE A 2 1555 1555 1.33 LINK C GLY A 141 N MSE A 142 1555 1555 1.33 LINK C MSE A 142 N PRO A 143 1555 1555 1.35 LINK C THR A 227 N MSE A 228 1555 1555 1.33 LINK C MSE A 228 N VAL A 229 1555 1555 1.33 LINK C GLU A 259 N MSE A 260 1555 1555 1.33 LINK C MSE A 260 N ASN A 261 1555 1555 1.33 LINK C GLY A 308 N MSE A 309 1555 1555 1.34 LINK C MSE A 309 N THR A 310 1555 1555 1.33 LINK C LEU A 389 N MSE A 390 1555 1555 1.33 LINK C MSE A 390 N LEU A 391 1555 1555 1.33 LINK C VAL A 404 N MSE A 405 1555 1555 1.33 LINK C MSE A 405 N LYS A 406 1555 1555 1.33 LINK C VAL A 461 N MSE A 462 1555 1555 1.33 LINK C MSE A 462 N VAL A 463 1555 1555 1.33 LINK C LEU A 556 N MSE A 557 1555 1555 1.32 LINK C MSE A 557 N THR A 558 1555 1555 1.33 LINK NE2 HIS A 277 ZN ZN A 602 1555 1555 2.00 LINK OE1 GLU A 307 ZN ZN A 602 1555 1555 2.20 LINK NE2 HIS A 273 ZN ZN A 602 1555 1555 2.26 LINK O2 MAE A 601 ZN ZN A 602 1555 1555 2.26 LINK O1 MAE A 601 ZN ZN A 602 1555 1555 2.63 CISPEP 1 LEU A 290 PRO A 291 0 0.27 SITE 1 AC1 11 GLY A 39 GLY A 236 GLU A 238 HIS A 273 SITE 2 AC1 11 HIS A 277 GLU A 307 TYR A 377 ZN A 602 SITE 3 AC1 11 HOH A 754 HOH A 786 HOH A 848 SITE 1 AC2 4 HIS A 273 HIS A 277 GLU A 307 MAE A 601 CRYST1 119.657 119.657 220.134 90.00 90.00 120.00 P 62 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008357 0.004825 0.000000 0.00000 SCALE2 0.000000 0.009650 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004543 0.00000