HEADER SIGNALING PROTEIN 24-APR-12 4ETZ TITLE CRYSTAL STRUCTURE OF PELD 158-CT FROM PSEUDOMONAS AERUGINOSA PAO1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PELD; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 158-454; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 208964; SOURCE 4 STRAIN: PAO1; SOURCE 5 GENE: PA3061, PELD; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 ROSETTA(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28 KEYWDS C-DI-GMP, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Z.LI,J.CHEN,S.K.NAIR REVDAT 3 28-FEB-24 4ETZ 1 REMARK HETSYN REVDAT 2 19-SEP-12 4ETZ 1 JRNL REVDAT 1 25-JUL-12 4ETZ 0 JRNL AUTH Z.LI,J.H.CHEN,Y.HAO,S.K.NAIR JRNL TITL STRUCTURES OF THE PELD CYCLIC DIGUANYLATE EFFECTOR INVOLVED JRNL TITL 2 IN PELLICLE FORMATION IN PSEUDOMONAS AERUGINOSA PAO1. JRNL REF J.BIOL.CHEM. V. 287 30191 2012 JRNL REFN ISSN 0021-9258 JRNL PMID 22810222 JRNL DOI 10.1074/JBC.M112.378273 REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 40287 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.233 REMARK 3 R VALUE (WORKING SET) : 0.231 REMARK 3 FREE R VALUE : 0.277 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2015 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.05 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.10 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2768 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2940 REMARK 3 BIN FREE R VALUE SET COUNT : 146 REMARK 3 BIN FREE R VALUE : 0.3620 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4536 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 92 REMARK 3 SOLVENT ATOMS : 140 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 49.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 53.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.43000 REMARK 3 B22 (A**2) : -0.74000 REMARK 3 B33 (A**2) : 3.19000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.11000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.240 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.204 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.173 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 13.433 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.945 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.924 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4698 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6374 ; 1.510 ; 2.027 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 570 ; 6.333 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 238 ;35.673 ;23.025 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 812 ;19.294 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 62 ;17.493 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 730 ; 0.101 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3558 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2846 ; 0.776 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4526 ; 1.444 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1852 ; 1.991 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1848 ; 3.250 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 158 A 454 REMARK 3 ORIGIN FOR THE GROUP (A): 22.0717 -0.1407 11.8160 REMARK 3 T TENSOR REMARK 3 T11: 0.1487 T22: 0.1153 REMARK 3 T33: 0.0744 T12: 0.0113 REMARK 3 T13: 0.0248 T23: -0.0097 REMARK 3 L TENSOR REMARK 3 L11: 5.8542 L22: 0.9682 REMARK 3 L33: 0.9988 L12: 0.9181 REMARK 3 L13: 1.8891 L23: 0.3018 REMARK 3 S TENSOR REMARK 3 S11: -0.0328 S12: -0.4447 S13: 0.1649 REMARK 3 S21: 0.0803 S22: -0.0202 S23: 0.1740 REMARK 3 S31: -0.0538 S32: 0.0263 S33: 0.0530 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 158 B 454 REMARK 3 ORIGIN FOR THE GROUP (A): 17.3539 -18.7671 43.3493 REMARK 3 T TENSOR REMARK 3 T11: 0.2761 T22: 0.2749 REMARK 3 T33: 0.1153 T12: 0.0001 REMARK 3 T13: -0.0316 T23: 0.0026 REMARK 3 L TENSOR REMARK 3 L11: 7.1765 L22: 1.1428 REMARK 3 L33: 0.9412 L12: -0.6552 REMARK 3 L13: -2.4005 L23: 0.2554 REMARK 3 S TENSOR REMARK 3 S11: 0.0389 S12: 0.3908 S13: 0.0036 REMARK 3 S21: -0.1061 S22: -0.0501 S23: 0.2856 REMARK 3 S31: 0.0139 S32: 0.0321 S33: 0.0112 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : RESIDUAL ONLY REMARK 4 REMARK 4 4ETZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-MAY-12. REMARK 100 THE DEPOSITION ID IS D_1000072066. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 300 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40304 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.6800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.15 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.89700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.310 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.40 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM TRIS, PH 8.5, 200 MM LI2SO4, REMARK 280 AND 1.26 M (NH4)2SO4, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 20.65500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 248 REMARK 465 LEU A 249 REMARK 465 LEU A 250 REMARK 465 GLU A 251 REMARK 465 ARG A 252 REMARK 465 GLY A 253 REMARK 465 GLU A 254 REMARK 465 GLN A 255 REMARK 465 ARG A 256 REMARK 465 ALA A 257 REMARK 465 HIS A 258 REMARK 465 SER A 259 REMARK 465 ARG B 252 REMARK 465 GLY B 253 REMARK 465 GLU B 254 REMARK 465 GLN B 255 REMARK 465 ARG B 256 REMARK 465 ALA B 257 REMARK 465 HIS B 258 REMARK 465 SER B 259 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ALA B 228 O HOH B 626 2.17 REMARK 500 NH1 ARG A 246 OE2 GLU A 290 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 369 CB - CG - CD1 ANGL. DEV. = 10.4 DEGREES REMARK 500 GLY A 395 C - N - CA ANGL. DEV. = -13.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 227 88.91 -66.44 REMARK 500 ARG A 246 170.75 -50.29 REMARK 500 SER A 309 -127.62 -81.19 REMARK 500 ASP A 310 -43.73 -24.10 REMARK 500 LEU A 316 25.93 -69.29 REMARK 500 ARG A 435 -90.53 10.78 REMARK 500 GLN A 436 31.83 -91.75 REMARK 500 GLU A 445 -68.93 -157.03 REMARK 500 ALA B 228 -81.17 -29.65 REMARK 500 ARG B 246 -163.06 -71.61 REMARK 500 GLN B 247 49.98 33.53 REMARK 500 GLU B 248 110.86 61.13 REMARK 500 ASP B 310 -144.87 -88.75 REMARK 500 ARG B 311 -28.64 54.40 REMARK 500 ARG B 312 80.48 -44.90 REMARK 500 PHE B 411 -167.02 -108.28 REMARK 500 ALA B 431 -84.90 21.32 REMARK 500 ASP B 434 -179.09 -61.17 REMARK 500 ARG B 435 -76.39 -57.52 REMARK 500 GLU B 445 -44.45 -133.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C2E A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C2E B 501 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4ETX RELATED DB: PDB REMARK 900 RELATED ID: 4EU0 RELATED DB: PDB DBREF 4ETZ A 158 454 UNP Q9HZE7 Q9HZE7_PSEAE 158 454 DBREF 4ETZ B 158 454 UNP Q9HZE7 Q9HZE7_PSEAE 158 454 SEQRES 1 A 297 GLN SER LEU ARG SER SER LEU LEU GLY LEU ARG GLN LEU SEQRES 2 A 297 LEU ARG GLU LEU PRO GLY ASP GLU ALA PRO LEU ASP ALA SEQRES 3 A 297 LEU ALA GLU THR VAL LEU ALA LEU LEU ALA GLN TYR GLY SEQRES 4 A 297 SER LEU ARG ILE ALA GLY LEU TYR ARG VAL ARG TYR ASP SEQRES 5 A 297 ARG THR PRO GLU PRO GLN PRO LEU ALA THR LEU GLY GLU SEQRES 6 A 297 MET PRO ALA LEU ASP ALA ASP ASP LEU LEU VAL ARG THR SEQRES 7 A 297 CYS LEU GLU ARG GLY GLU LEU VAL SER VAL ARG GLN GLU SEQRES 8 A 297 LEU LEU GLU ARG GLY GLU GLN ARG ALA HIS SER ALA LEU SEQRES 9 A 297 GLN VAL CYS VAL PRO LEU VAL ASP THR ASP GLY ARG ILE SEQRES 10 A 297 LEU ALA LEU LEU ALA VAL GLU GLN MET PRO PHE PHE VAL SEQRES 11 A 297 PHE ASN GLU ARG THR PHE SER LEU LEU ALA ILE LEU ALA SEQRES 12 A 297 GLY HIS ILE ALA ASP LEU LEU GLN SER ASP ARG ARG ALA SEQRES 13 A 297 LEU GLN LEU ALA ASP ILE ASP ALA GLN ARG PHE SER GLN SEQRES 14 A 297 TYR LEU LYS ARG SER LEU LEU ASP ALA ARG ASP HIS GLY SEQRES 15 A 297 LEU PRO ALA CYS LEU TYR ALA PHE GLU LEU THR ASP ALA SEQRES 16 A 297 ARG TYR GLY GLU GLU VAL GLN ARG LEU LEU GLU GLY SER SEQRES 17 A 297 GLN ARG GLY LEU ASP VAL GLN LEU ARG LEU ARG ASN ASP SEQRES 18 A 297 GLU GLY ARG ARG VAL LEU LEU VAL LEU LEU PRO LEU THR SEQRES 19 A 297 SER ALA GLU GLY SER GLN GLY TYR LEU GLN ARG LEU ARG SEQRES 20 A 297 ILE LEU PHE ALA GLU ARG PHE GLY GLN ALA ARG GLU LEU SEQRES 21 A 297 GLU SER LEU GLY VAL ARG ILE ARG GLN TYR GLU LEU ASP SEQRES 22 A 297 ALA GLY ASN ASP ARG GLN ALA LEU GLY HIS PHE LEU PHE SEQRES 23 A 297 ASN GLU CYS GLY LEU ASN ASP GLN GLN VAL ALA SEQRES 1 B 297 GLN SER LEU ARG SER SER LEU LEU GLY LEU ARG GLN LEU SEQRES 2 B 297 LEU ARG GLU LEU PRO GLY ASP GLU ALA PRO LEU ASP ALA SEQRES 3 B 297 LEU ALA GLU THR VAL LEU ALA LEU LEU ALA GLN TYR GLY SEQRES 4 B 297 SER LEU ARG ILE ALA GLY LEU TYR ARG VAL ARG TYR ASP SEQRES 5 B 297 ARG THR PRO GLU PRO GLN PRO LEU ALA THR LEU GLY GLU SEQRES 6 B 297 MET PRO ALA LEU ASP ALA ASP ASP LEU LEU VAL ARG THR SEQRES 7 B 297 CYS LEU GLU ARG GLY GLU LEU VAL SER VAL ARG GLN GLU SEQRES 8 B 297 LEU LEU GLU ARG GLY GLU GLN ARG ALA HIS SER ALA LEU SEQRES 9 B 297 GLN VAL CYS VAL PRO LEU VAL ASP THR ASP GLY ARG ILE SEQRES 10 B 297 LEU ALA LEU LEU ALA VAL GLU GLN MET PRO PHE PHE VAL SEQRES 11 B 297 PHE ASN GLU ARG THR PHE SER LEU LEU ALA ILE LEU ALA SEQRES 12 B 297 GLY HIS ILE ALA ASP LEU LEU GLN SER ASP ARG ARG ALA SEQRES 13 B 297 LEU GLN LEU ALA ASP ILE ASP ALA GLN ARG PHE SER GLN SEQRES 14 B 297 TYR LEU LYS ARG SER LEU LEU ASP ALA ARG ASP HIS GLY SEQRES 15 B 297 LEU PRO ALA CYS LEU TYR ALA PHE GLU LEU THR ASP ALA SEQRES 16 B 297 ARG TYR GLY GLU GLU VAL GLN ARG LEU LEU GLU GLY SER SEQRES 17 B 297 GLN ARG GLY LEU ASP VAL GLN LEU ARG LEU ARG ASN ASP SEQRES 18 B 297 GLU GLY ARG ARG VAL LEU LEU VAL LEU LEU PRO LEU THR SEQRES 19 B 297 SER ALA GLU GLY SER GLN GLY TYR LEU GLN ARG LEU ARG SEQRES 20 B 297 ILE LEU PHE ALA GLU ARG PHE GLY GLN ALA ARG GLU LEU SEQRES 21 B 297 GLU SER LEU GLY VAL ARG ILE ARG GLN TYR GLU LEU ASP SEQRES 22 B 297 ALA GLY ASN ASP ARG GLN ALA LEU GLY HIS PHE LEU PHE SEQRES 23 B 297 ASN GLU CYS GLY LEU ASN ASP GLN GLN VAL ALA HET C2E A 501 46 HET C2E B 501 46 HETNAM C2E 9,9'-[(2R,3R,3AS,5S,7AR,9R,10R,10AS,12S,14AR)-3,5,10, HETNAM 2 C2E 12-TETRAHYDROXY-5,12-DIOXIDOOCTAHYDRO-2H,7H-DIFURO[3, HETNAM 3 C2E 2-D:3',2'-J][1,3,7,9,2, HETNAM 4 C2E 8]TETRAOXADIPHOSPHACYCLODODECINE-2,9-DIYL]BIS(2-AMINO- HETNAM 5 C2E 1,9-DIHYDRO-6H-PURIN-6-ONE) HETSYN C2E C-DI-GMP; CYCLIC DIGUANOSINE MONOPHOSPHATE FORMUL 3 C2E 2(C20 H24 N10 O14 P2) FORMUL 5 HOH *140(H2 O) HELIX 1 1 GLN A 158 LEU A 174 1 17 HELIX 2 2 ALA A 179 LEU A 184 1 6 HELIX 3 3 LEU A 184 SER A 197 1 14 HELIX 4 4 ASP A 230 GLY A 240 1 11 HELIX 5 5 PRO A 284 PHE A 288 5 5 HELIX 6 6 ASN A 289 SER A 309 1 21 HELIX 7 7 ASP A 318 GLY A 339 1 22 HELIX 8 8 TYR A 354 SER A 365 1 12 HELIX 9 9 SER A 392 PHE A 411 1 20 HELIX 10 10 GLU A 416 LEU A 420 5 5 HELIX 11 11 GLN A 436 PHE A 443 1 8 HELIX 12 12 SER B 159 GLU B 173 1 15 HELIX 13 13 ALA B 179 SER B 197 1 19 HELIX 14 14 ASP B 230 GLY B 240 1 11 HELIX 15 15 ASN B 289 GLN B 308 1 20 HELIX 16 16 ASP B 318 GLY B 339 1 22 HELIX 17 17 TYR B 354 SER B 365 1 12 HELIX 18 18 SER B 392 PHE B 411 1 20 HELIX 19 19 GLU B 416 LEU B 420 5 5 HELIX 20 20 GLN B 436 PHE B 443 1 8 SHEET 1 A 5 ALA A 218 LEU A 220 0 SHEET 2 A 5 ILE A 200 ARG A 205 -1 N ALA A 201 O LEU A 220 SHEET 3 A 5 ILE A 274 GLN A 282 -1 O GLU A 281 N ILE A 200 SHEET 4 A 5 VAL A 263 VAL A 268 -1 N VAL A 263 O VAL A 280 SHEET 5 A 5 VAL A 243 SER A 244 -1 N VAL A 243 O CYS A 264 SHEET 1 B 4 VAL A 371 ARG A 376 0 SHEET 2 B 4 ARG A 382 LEU A 388 -1 O VAL A 383 N LEU A 375 SHEET 3 B 4 ALA A 342 LEU A 349 -1 N CYS A 343 O LEU A 388 SHEET 4 B 4 VAL A 422 LEU A 429 -1 O ARG A 425 N ALA A 346 SHEET 1 C 5 ALA B 218 LEU B 220 0 SHEET 2 C 5 ILE B 200 ARG B 205 -1 N ALA B 201 O LEU B 220 SHEET 3 C 5 ILE B 274 GLN B 282 -1 O LEU B 277 N TYR B 204 SHEET 4 C 5 VAL B 263 VAL B 268 -1 N VAL B 265 O LEU B 278 SHEET 5 C 5 VAL B 243 SER B 244 -1 N VAL B 243 O CYS B 264 SHEET 1 D 4 VAL B 371 ARG B 376 0 SHEET 2 D 4 ARG B 382 LEU B 388 -1 O VAL B 383 N LEU B 375 SHEET 3 D 4 ALA B 342 LEU B 349 -1 N TYR B 345 O VAL B 386 SHEET 4 D 4 VAL B 422 LEU B 429 -1 O ARG B 423 N GLU B 348 CISPEP 1 GLU B 248 LEU B 249 0 2.40 SITE 1 AC1 13 GLN A 158 ARG A 161 ARG A 367 ASP A 370 SITE 2 AC1 13 LEU A 388 THR A 391 GLY A 395 GLY A 398 SITE 3 AC1 13 TYR A 399 ARG A 402 HOH A 602 HOH A 630 SITE 4 AC1 13 HOH A 634 SITE 1 AC2 11 GLN B 158 ARG B 161 ARG B 367 ASP B 370 SITE 2 AC2 11 THR B 391 GLY B 395 GLY B 398 TYR B 399 SITE 3 AC2 11 ARG B 402 HOH B 602 HOH B 608 CRYST1 70.320 41.310 110.850 90.00 95.45 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014221 0.000000 0.001357 0.00000 SCALE2 0.000000 0.024207 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009062 0.00000