HEADER TRANSCRIPTION 13-SEP-11 4A0Z TITLE STRUCTURE OF THE GLOBAL TRANSCRIPTION REGULATOR FAPR FROM TITLE 2 STAPHYLOCOCCUS AUREUS IN COMPLEX WITH MALONYL-COA COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSCRIPTION FACTOR FAPR; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: FATTY ACID AND PHOSPHOLIPID BIOSYNTHESIS REGULATOR, COMPND 5 REPRESSOR FACTOR FAPR; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 1280; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 7 EXPRESSION_SYSTEM_VARIANT: PLYSS; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET15B KEYWDS TRANSCRIPTION, LIPID HOMEOSTASIS EXPDTA X-RAY DIFFRACTION AUTHOR D.ALBANESI,M.E.GUERIN,A.BUSCHIAZZO,D.DE MENDOZA,P.M.ALZARI REVDAT 3 20-DEC-23 4A0Z 1 REMARK REVDAT 2 23-JAN-13 4A0Z 1 JRNL REVDAT 1 26-SEP-12 4A0Z 0 JRNL AUTH D.ALBANESI,G.REH,M.E.GUERIN,F.SCHAEFFER,M.DEBARBOUILLE, JRNL AUTH 2 A.BUSCHIAZZO,G.E.SCHUJMAN,D.DE MENDOZA,P.M.ALZARI JRNL TITL STRUCTURAL BASIS FOR FEED-FORWARD TRANSCRIPTIONAL REGULATION JRNL TITL 2 OF MEMBRANE LIPID HOMEOSTASIS IN STAPHYLOCOCCUS AUREUS. JRNL REF PLOS PATHOG. V. 9 3108 2013 JRNL REFN ISSN 1553-7366 JRNL PMID 23300457 JRNL DOI 10.1371/JOURNAL.PPAT.1003108 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0044 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.73 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 30557 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.236 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1631 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2245 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.83 REMARK 3 BIN R VALUE (WORKING SET) : 0.2710 REMARK 3 BIN FREE R VALUE SET COUNT : 119 REMARK 3 BIN FREE R VALUE : 0.3390 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2538 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 98 REMARK 3 SOLVENT ATOMS : 150 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.35000 REMARK 3 B22 (A**2) : -1.93000 REMARK 3 B33 (A**2) : 2.67000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.53000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.145 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.138 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.106 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.295 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.953 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.930 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2681 ; 0.012 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3641 ; 1.393 ; 1.984 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 319 ; 6.229 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 121 ;30.616 ;24.050 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 455 ;13.823 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 17 ;17.338 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 423 ; 0.087 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1962 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1602 ; 0.568 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2599 ; 1.054 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1079 ; 1.935 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1042 ; 3.186 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 80 A 189 6 REMARK 3 1 B 80 B 189 6 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 LOOSE POSITIONAL 1 A (A): 868 ; 0.30 ; 5.00 REMARK 3 LOOSE POSITIONAL 1 B (A): 868 ; 0.30 ; 5.00 REMARK 3 LOOSE THERMAL 1 A (A**2): 868 ; 1.52 ; 10.00 REMARK 3 LOOSE THERMAL 1 B (A**2): 868 ; 1.52 ; 10.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 80 A 189 REMARK 3 RESIDUE RANGE : B 80 B 189 REMARK 3 ORIGIN FOR THE GROUP (A): -0.3537 0.0054 15.9132 REMARK 3 T TENSOR REMARK 3 T11: 0.0431 T22: 0.0030 REMARK 3 T33: 0.0444 T12: 0.0021 REMARK 3 T13: -0.0085 T23: 0.0104 REMARK 3 L TENSOR REMARK 3 L11: 1.6716 L22: 4.3491 REMARK 3 L33: 5.4956 L12: 0.1903 REMARK 3 L13: -0.4400 L23: 0.3336 REMARK 3 S TENSOR REMARK 3 S11: 0.0339 S12: 0.0131 S13: 0.0540 REMARK 3 S21: -0.4093 S22: -0.0453 S23: -0.0004 REMARK 3 S31: 0.0010 S32: -0.0281 S33: 0.0114 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 5 A 79 REMARK 3 ORIGIN FOR THE GROUP (A): 6.6173 25.5958 32.5111 REMARK 3 T TENSOR REMARK 3 T11: 0.0238 T22: 0.2732 REMARK 3 T33: 0.2059 T12: -0.0349 REMARK 3 T13: -0.0166 T23: 0.0097 REMARK 3 L TENSOR REMARK 3 L11: 2.1540 L22: 10.0079 REMARK 3 L33: 0.9284 L12: 1.0428 REMARK 3 L13: -0.0567 L23: 1.8214 REMARK 3 S TENSOR REMARK 3 S11: 0.1253 S12: 0.0444 S13: 0.3821 REMARK 3 S21: 0.1801 S22: -0.0786 S23: -0.2388 REMARK 3 S31: 0.0050 S32: -0.1312 S33: -0.0467 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 5 B 79 REMARK 3 ORIGIN FOR THE GROUP (A): 16.0873 -10.1268 4.4090 REMARK 3 T TENSOR REMARK 3 T11: 0.5665 T22: 0.6955 REMARK 3 T33: 0.3696 T12: 0.2518 REMARK 3 T13: 0.2595 T23: 0.0675 REMARK 3 L TENSOR REMARK 3 L11: 4.1751 L22: 9.5103 REMARK 3 L33: 1.2950 L12: -3.3634 REMARK 3 L13: -0.7095 L23: 3.3434 REMARK 3 S TENSOR REMARK 3 S11: 0.5442 S12: 0.9275 S13: 0.2815 REMARK 3 S21: -0.7132 S22: -0.0790 S23: -1.3782 REMARK 3 S31: -0.0733 S32: 0.2184 S33: -0.4652 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 4A0Z COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 13-SEP-11. REMARK 100 THE DEPOSITION ID IS D_1290049620. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-DEC-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.072 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30557 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 44.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.04000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.35000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 4A0X REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.45 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% MPD, 5% PEG-4000, 0.1M NA HEPES, REMARK 280 PH=7.5, PH 7.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 34.25000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4640 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15380 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -27.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ARG A 2 REMARK 465 GLY A 3 REMARK 465 GLU A 4 REMARK 465 THR A 5 REMARK 465 LEU A 6 REMARK 465 GLY A 190 REMARK 465 MET B 1 REMARK 465 ARG B 2 REMARK 465 GLY B 3 REMARK 465 GLU B 4 REMARK 465 THR B 5 REMARK 465 LEU B 6 REMARK 465 LYS B 7 REMARK 465 LEU B 8 REMARK 465 LYS B 9 REMARK 465 LYS B 10 REMARK 465 ASP B 11 REMARK 465 LYS B 12 REMARK 465 ARG B 13 REMARK 465 ARG B 14 REMARK 465 GLU B 15 REMARK 465 ALA B 16 REMARK 465 ILE B 17 REMARK 465 ARG B 18 REMARK 465 GLN B 19 REMARK 465 GLN B 20 REMARK 465 ILE B 21 REMARK 465 ASP B 22 REMARK 465 SER B 23 REMARK 465 ASN B 24 REMARK 465 PRO B 25 REMARK 465 PHE B 26 REMARK 465 ILE B 27 REMARK 465 THR B 28 REMARK 465 ASP B 29 REMARK 465 HIS B 30 REMARK 465 GLU B 31 REMARK 465 LEU B 32 REMARK 465 SER B 33 REMARK 465 ASP B 34 REMARK 465 LEU B 35 REMARK 465 PHE B 36 REMARK 465 GLN B 37 REMARK 465 VAL B 38 REMARK 465 SER B 39 REMARK 465 ILE B 40 REMARK 465 GLN B 41 REMARK 465 THR B 42 REMARK 465 ILE B 43 REMARK 465 ARG B 44 REMARK 465 LEU B 45 REMARK 465 ASP B 46 REMARK 465 ARG B 47 REMARK 465 THR B 48 REMARK 465 TYR B 49 REMARK 465 LEU B 50 REMARK 465 ASN B 51 REMARK 465 GLY B 190 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 7 CG CD CE NZ REMARK 470 LEU A 8 CG CD1 CD2 REMARK 470 LYS A 9 CG CD CE NZ REMARK 470 LYS A 10 CG CD CE NZ REMARK 470 LYS A 12 CD CE NZ REMARK 470 GLU A 15 CG CD OE1 OE2 REMARK 470 ASP A 22 CG OD1 OD2 REMARK 470 LYS A 60 CG CD CE NZ REMARK 470 LYS A 65 CE NZ REMARK 470 GLN A 76 CG CD OE1 NE2 REMARK 470 LYS A 105 CG CD CE NZ REMARK 470 ILE B 52 CG1 CG2 CD1 REMARK 470 GLU B 54 CG CD OE1 OE2 REMARK 470 LEU B 55 CG CD1 CD2 REMARK 470 LYS B 57 CG CD CE NZ REMARK 470 GLU B 64 CG CD OE1 OE2 REMARK 470 LYS B 65 CG CD CE NZ REMARK 470 GLN B 69 CG CD OE1 NE2 REMARK 470 GLN B 76 CG CD OE1 NE2 REMARK 470 LYS B 105 CE NZ REMARK 470 LYS B 127 CD CE NZ REMARK 470 LYS B 188 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 89 -67.41 -125.21 REMARK 500 ASN A 147 -4.65 82.25 REMARK 500 LYS A 173 -124.66 53.53 REMARK 500 VAL B 89 -65.13 -127.41 REMARK 500 ASN B 147 -1.35 82.56 REMARK 500 LYS B 173 -116.59 56.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 MLC B 201 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MLC A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MLC B 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4A0Y RELATED DB: PDB REMARK 900 STRUCTURE OF THE GLOBAL TRANSCRIPTION REGULATOR FAPR FROM REMARK 900 STAPHYLOCOCCUS AUREUS REMARK 900 RELATED ID: 4A0X RELATED DB: PDB REMARK 900 STRUCTURE OF THE GLOBAL TRANSCRIPTION REGULATOR FAPR FROM REMARK 900 STAPHYLOCOCCUS AUREUS REMARK 900 RELATED ID: 4A12 RELATED DB: PDB REMARK 900 STRUCTURE OF THE GLOBAL TRANSCRIPTION REGULATOR FAPR FROM REMARK 900 STAPHYLOCOCCUS AUREUS IN COMPLEX WITH DNA OPERATOR DBREF 4A0Z A 1 190 UNP D6UB50 D6UB50_STAAU 1 190 DBREF 4A0Z B 1 190 UNP D6UB50 D6UB50_STAAU 1 190 SEQRES 1 A 190 MET ARG GLY GLU THR LEU LYS LEU LYS LYS ASP LYS ARG SEQRES 2 A 190 ARG GLU ALA ILE ARG GLN GLN ILE ASP SER ASN PRO PHE SEQRES 3 A 190 ILE THR ASP HIS GLU LEU SER ASP LEU PHE GLN VAL SER SEQRES 4 A 190 ILE GLN THR ILE ARG LEU ASP ARG THR TYR LEU ASN ILE SEQRES 5 A 190 PRO GLU LEU ARG LYS ARG ILE LYS LEU VAL ALA GLU LYS SEQRES 6 A 190 ASN TYR ASP GLN ILE SER SER ILE GLU GLU GLN GLU PHE SEQRES 7 A 190 ILE GLY ASP LEU ILE GLN VAL ASN PRO ASN VAL LYS ALA SEQRES 8 A 190 GLN SER ILE LEU ASP ILE THR SER ASP SER VAL PHE HIS SEQRES 9 A 190 LYS THR GLY ILE ALA ARG GLY HIS VAL LEU PHE ALA GLN SEQRES 10 A 190 ALA ASN SER LEU CYS VAL ALA LEU ILE LYS GLN PRO THR SEQRES 11 A 190 VAL LEU THR HIS GLU SER SER ILE GLN PHE ILE GLU LYS SEQRES 12 A 190 VAL LYS LEU ASN ASP THR VAL ARG ALA GLU ALA ARG VAL SEQRES 13 A 190 VAL ASN GLN THR ALA LYS HIS TYR TYR VAL GLU VAL LYS SEQRES 14 A 190 SER TYR VAL LYS HIS THR LEU VAL PHE LYS GLY ASN PHE SEQRES 15 A 190 LYS MET PHE TYR ASP LYS ARG GLY SEQRES 1 B 190 MET ARG GLY GLU THR LEU LYS LEU LYS LYS ASP LYS ARG SEQRES 2 B 190 ARG GLU ALA ILE ARG GLN GLN ILE ASP SER ASN PRO PHE SEQRES 3 B 190 ILE THR ASP HIS GLU LEU SER ASP LEU PHE GLN VAL SER SEQRES 4 B 190 ILE GLN THR ILE ARG LEU ASP ARG THR TYR LEU ASN ILE SEQRES 5 B 190 PRO GLU LEU ARG LYS ARG ILE LYS LEU VAL ALA GLU LYS SEQRES 6 B 190 ASN TYR ASP GLN ILE SER SER ILE GLU GLU GLN GLU PHE SEQRES 7 B 190 ILE GLY ASP LEU ILE GLN VAL ASN PRO ASN VAL LYS ALA SEQRES 8 B 190 GLN SER ILE LEU ASP ILE THR SER ASP SER VAL PHE HIS SEQRES 9 B 190 LYS THR GLY ILE ALA ARG GLY HIS VAL LEU PHE ALA GLN SEQRES 10 B 190 ALA ASN SER LEU CYS VAL ALA LEU ILE LYS GLN PRO THR SEQRES 11 B 190 VAL LEU THR HIS GLU SER SER ILE GLN PHE ILE GLU LYS SEQRES 12 B 190 VAL LYS LEU ASN ASP THR VAL ARG ALA GLU ALA ARG VAL SEQRES 13 B 190 VAL ASN GLN THR ALA LYS HIS TYR TYR VAL GLU VAL LYS SEQRES 14 B 190 SER TYR VAL LYS HIS THR LEU VAL PHE LYS GLY ASN PHE SEQRES 15 B 190 LYS MET PHE TYR ASP LYS ARG GLY HET MLC A 201 54 HET MLC B 201 44 HETNAM MLC MALONYL-COENZYME A FORMUL 3 MLC 2(C24 H38 N7 O19 P3 S) FORMUL 5 HOH *150(H2 O) HELIX 1 1 LYS A 7 ASN A 24 1 18 HELIX 2 2 THR A 28 GLN A 37 1 10 HELIX 3 3 SER A 39 ASN A 51 1 13 HELIX 4 4 GLU A 54 ASP A 68 1 15 HELIX 5 5 GLU A 74 PHE A 78 5 5 HELIX 6 6 THR A 98 SER A 101 5 4 HELIX 7 7 ARG A 110 ILE A 126 1 17 HELIX 8 8 GLU B 54 TYR B 67 1 14 HELIX 9 9 GLU B 74 PHE B 78 5 5 HELIX 10 10 THR B 98 SER B 101 5 4 HELIX 11 11 ARG B 110 ILE B 126 1 17 SHEET 1 AA12 ASP A 81 ASN A 86 0 SHEET 2 AA12 LYS A 90 ASP A 96 -1 O LYS A 90 N ASN A 86 SHEET 3 AA12 THR A 149 GLN A 159 -1 O VAL A 150 N LEU A 95 SHEET 4 AA12 HIS A 163 VAL A 172 -1 O TYR A 165 N VAL A 157 SHEET 5 AA12 THR A 175 ASP A 187 -1 O THR A 175 N VAL A 172 SHEET 6 AA12 THR A 130 PHE A 140 -1 O THR A 130 N ASP A 187 SHEET 7 AA12 THR B 130 PHE B 140 -1 O HIS B 134 N PHE A 140 SHEET 8 AA12 THR B 175 ASP B 187 -1 O LYS B 179 N GLN B 139 SHEET 9 AA12 HIS B 163 VAL B 172 -1 O TYR B 164 N MET B 184 SHEET 10 AA12 THR B 149 GLN B 159 -1 O ARG B 151 N TYR B 171 SHEET 11 AA12 LYS B 90 ASP B 96 -1 O ALA B 91 N ALA B 154 SHEET 12 AA12 ASP B 81 ASN B 86 -1 O ASP B 81 N ILE B 94 SITE 1 AC1 24 PHE A 103 ALA A 109 ARG A 110 GLY A 111 SITE 2 AC1 24 PHE A 140 ILE A 141 GLU A 142 LYS A 143 SITE 3 AC1 24 HOH A2059 HOH A2060 HOH A2071 HOH A2097 SITE 4 AC1 24 HOH A2098 HOH A2099 ASN B 119 VAL B 123 SITE 5 AC1 24 THR B 130 LEU B 132 THR B 133 HIS B 134 SITE 6 AC1 24 LYS B 162 PHE B 185 ASP B 187 ARG B 189 SITE 1 AC2 18 ASN A 119 VAL A 123 THR A 133 HIS A 134 SITE 2 AC2 18 LYS A 162 PHE A 185 ASP A 187 HOH A2062 SITE 3 AC2 18 PHE B 103 ALA B 109 ARG B 110 GLY B 111 SITE 4 AC2 18 PHE B 140 ILE B 141 GLU B 142 LYS B 143 SITE 5 AC2 18 HOH B2027 HOH B2051 CRYST1 53.380 68.500 61.160 90.00 111.31 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018734 0.000000 0.007308 0.00000 SCALE2 0.000000 0.014599 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017551 0.00000