HEADER OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR 04-FEB-10 3AE8 TITLE CRYSTAL STRUCTURE OF PORCINE HEART MITOCHONDRIAL COMPLEX II BOUND WITH TITLE 2 N-(3-ISOPROPOXY-PHENYL)-2-TRIFLUOROMETHYLBENZAMIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: SUCCINATE DEHYDROGENASE [UBIQUINONE] FLAVOPROTEIN SUBUNIT, COMPND 3 MITOCHONDRIAL; COMPND 4 CHAIN: A; COMPND 5 SYNONYM: FLAVOPROTEIN SUBUNIT OF COMPLEX II, FP; COMPND 6 EC: 1.3.5.1; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: SUCCINATE DEHYDROGENASE [UBIQUINONE] IRON-SULFUR SUBUNIT, COMPND 9 MITOCHONDRIAL; COMPND 10 CHAIN: B; COMPND 11 SYNONYM: IRON-SULFUR SUBUNIT OF COMPLEX II, IP; COMPND 12 EC: 1.3.5.1; COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: SUCCINATE DEHYDROGENASE CYTOCHROME B560 SUBUNIT, COMPND 15 MITOCHONDRIAL; COMPND 16 CHAIN: C; COMPND 17 SYNONYM: SUCCINATE-UBIQUINONE OXIDOREDUCTASE CYTOCHROME B LARGE COMPND 18 SUBUNIT, CYBL; COMPND 19 MOL_ID: 4; COMPND 20 MOLECULE: SUCCINATE DEHYDROGENASE [UBIQUINONE] CYTOCHROME B SMALL COMPND 21 SUBUNIT, MITOCHONDRIAL; COMPND 22 CHAIN: D; COMPND 23 FRAGMENT: RESIDUES 57-159; COMPND 24 SYNONYM: SUCCINATE-UBIQUINONE OXIDOREDUCTASE CYTOCHROME B SMALL COMPND 25 SUBUNIT, CYBS, SUCCINATE-UBIQUINONE REDUCTASE MEMBRANE ANCHOR COMPND 26 SUBUNIT, QPS3, CII-4, SUCCINATE DEHYDROGENASE COMPLEX SUBUNIT D SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SUS SCROFA; SOURCE 3 ORGANISM_COMMON: PIG; SOURCE 4 ORGANISM_TAXID: 9823; SOURCE 5 ORGAN: HEART; SOURCE 6 TISSUE: MUSCLE; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: SUS SCROFA; SOURCE 9 ORGANISM_COMMON: PIG; SOURCE 10 ORGANISM_TAXID: 9823; SOURCE 11 ORGAN: HEART; SOURCE 12 TISSUE: MUSCLE; SOURCE 13 MOL_ID: 3; SOURCE 14 ORGANISM_SCIENTIFIC: SUS SCROFA; SOURCE 15 ORGANISM_COMMON: PIG; SOURCE 16 ORGANISM_TAXID: 9823; SOURCE 17 ORGAN: HEART; SOURCE 18 TISSUE: MUSCLE; SOURCE 19 MOL_ID: 4; SOURCE 20 ORGANISM_SCIENTIFIC: SUS SCROFA; SOURCE 21 ORGANISM_COMMON: PIG; SOURCE 22 ORGANISM_TAXID: 9823; SOURCE 23 ORGAN: HEART; SOURCE 24 TISSUE: MUSCLE KEYWDS RESPIRATORY COMPLEX II, INHIBITORS, ELECTRON TRANSPORT, IRON, IRON- KEYWDS 2 SULFUR, METAL-BINDING, MITOCHONDRION, MITOCHONDRION INNER MEMBRANE, KEYWDS 3 OXIDOREDUCTASE, TRANSIT PEPTIDE, TRANSPORT, TRICARBOXYLIC ACID KEYWDS 4 CYCLE, HEME, TRANSMEMBRANE, FAD-BINDING PROTEIN, OXIDOREDUCTASE- KEYWDS 5 OXIDOREDUCTASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR S.HARADA,T.SASAKI,M.SHINDO,Y.KIDO,D.K.INAOKA,J.OMORI,A.OSANAI, AUTHOR 2 K.SAKAMOTO,J.MAO,S.MATSUOKA,M.INOUE,T.HONMA,A.TANAKA,K.KITA REVDAT 3 11-OCT-17 3AE8 1 REMARK REVDAT 2 03-JUN-15 3AE8 1 HETSYN VERSN REMARK REVDAT 1 09-FEB-11 3AE8 0 JRNL AUTH S.HARADA,T.SASAKI,M.SHINDO,Y.KIDO,D.K.INAOKA,J.OMORI, JRNL AUTH 2 A.OSANAI,K.SAKAMOTO,J.MAO,S.MATSUOKA,M.INOUE,T.HONMA, JRNL AUTH 3 A.TANAKA,K.KITA JRNL TITL CRYSTAL STRUCTURE OF PORCINE HEART MITOCHONDRIAL COMPLEX II JRNL TITL 2 BOUND WITH N-(3-ISOPROPOXY-PHENYL) JRNL TITL 3 -2-TRIFLUOROMETHYLBENZAMIDE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.31 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 83.6 REMARK 3 NUMBER OF REFLECTIONS : 21173 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.242 REMARK 3 R VALUE (WORKING SET) : 0.239 REMARK 3 FREE R VALUE : 0.288 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1067 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.49 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1493 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 87.39 REMARK 3 BIN R VALUE (WORKING SET) : 0.3480 REMARK 3 BIN FREE R VALUE SET COUNT : 80 REMARK 3 BIN FREE R VALUE : 0.3800 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 8480 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 182 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 99.76 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.46000 REMARK 3 B22 (A**2) : -0.03000 REMARK 3 B33 (A**2) : -0.43000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.695 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.502 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 65.844 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.902 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.878 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 8867 ; 0.005 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 12024 ; 0.853 ; 1.992 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1088 ; 3.909 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 375 ;33.474 ;23.413 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1469 ;15.376 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 59 ; 9.797 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1306 ; 0.054 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6652 ; 0.003 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 5411 ; 0.089 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 8676 ; 0.160 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3456 ; 0.095 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 3331 ; 0.177 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 10 A 259 REMARK 3 ORIGIN FOR THE GROUP (A): 16.7220 -17.5080 -18.0590 REMARK 3 T TENSOR REMARK 3 T11: 0.0574 T22: 0.3183 REMARK 3 T33: 0.3952 T12: 0.1058 REMARK 3 T13: -0.0176 T23: -0.0400 REMARK 3 L TENSOR REMARK 3 L11: 2.1213 L22: 1.2571 REMARK 3 L33: 3.7662 L12: 0.4874 REMARK 3 L13: -0.6274 L23: 0.5079 REMARK 3 S TENSOR REMARK 3 S11: 0.0172 S12: 0.1139 S13: -0.0141 REMARK 3 S21: 0.0425 S22: -0.0930 S23: -0.0394 REMARK 3 S31: -0.4319 S32: -0.0937 S33: 0.0757 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 260 A 349 REMARK 3 ORIGIN FOR THE GROUP (A): 19.4220 8.8360 -24.3360 REMARK 3 T TENSOR REMARK 3 T11: 1.1478 T22: 0.3665 REMARK 3 T33: 0.7200 T12: 0.0770 REMARK 3 T13: 0.2820 T23: 0.0329 REMARK 3 L TENSOR REMARK 3 L11: 4.0335 L22: 1.5008 REMARK 3 L33: -1.2844 L12: 0.6122 REMARK 3 L13: 0.7575 L23: 1.0477 REMARK 3 S TENSOR REMARK 3 S11: 0.4390 S12: 0.3364 S13: 0.9952 REMARK 3 S21: -0.5650 S22: -0.2087 S23: -0.2676 REMARK 3 S31: -0.6333 S32: 0.0212 S33: -0.2303 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 350 A 622 REMARK 3 ORIGIN FOR THE GROUP (A): 4.2070 -10.7020 -11.6480 REMARK 3 T TENSOR REMARK 3 T11: 0.1260 T22: 0.3447 REMARK 3 T33: 0.3395 T12: 0.1797 REMARK 3 T13: 0.0319 T23: -0.0879 REMARK 3 L TENSOR REMARK 3 L11: 2.1885 L22: 1.7125 REMARK 3 L33: 3.3459 L12: 0.3100 REMARK 3 L13: 0.0310 L23: 0.7405 REMARK 3 S TENSOR REMARK 3 S11: -0.0429 S12: 0.0322 S13: 0.2210 REMARK 3 S21: 0.0964 S22: -0.0493 S23: 0.1980 REMARK 3 S31: -0.6510 S32: -0.5507 S33: 0.0922 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 9 B 106 REMARK 3 ORIGIN FOR THE GROUP (A): 2.8590 -11.6230 -46.0170 REMARK 3 T TENSOR REMARK 3 T11: 0.1035 T22: 0.6284 REMARK 3 T33: 0.3404 T12: 0.2734 REMARK 3 T13: -0.0809 T23: -0.0349 REMARK 3 L TENSOR REMARK 3 L11: 3.1517 L22: 3.5434 REMARK 3 L33: 5.8373 L12: -0.1101 REMARK 3 L13: 0.1871 L23: 0.6450 REMARK 3 S TENSOR REMARK 3 S11: -0.3264 S12: 0.4507 S13: 0.3161 REMARK 3 S21: -0.3743 S22: 0.0576 S23: 0.2564 REMARK 3 S31: -0.4518 S32: -1.0119 S33: 0.2687 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 107 B 247 REMARK 3 ORIGIN FOR THE GROUP (A): 29.5910 -24.1700 -40.1890 REMARK 3 T TENSOR REMARK 3 T11: 0.2139 T22: 0.2557 REMARK 3 T33: 0.5184 T12: 0.0352 REMARK 3 T13: 0.0559 T23: 0.0911 REMARK 3 L TENSOR REMARK 3 L11: 2.0036 L22: 0.3302 REMARK 3 L33: 4.5226 L12: 0.6026 REMARK 3 L13: -1.7824 L23: 0.6072 REMARK 3 S TENSOR REMARK 3 S11: -0.0486 S12: -0.1982 S13: -0.0331 REMARK 3 S21: -0.0872 S22: -0.0470 S23: -0.1780 REMARK 3 S31: 0.1269 S32: 0.5302 S33: 0.0955 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 6 C 38 REMARK 3 ORIGIN FOR THE GROUP (A): 12.6390 -29.4490 -48.2660 REMARK 3 T TENSOR REMARK 3 T11: 0.5707 T22: 0.5907 REMARK 3 T33: 0.4127 T12: 0.0119 REMARK 3 T13: 0.2048 T23: -0.2179 REMARK 3 L TENSOR REMARK 3 L11: 6.3987 L22: 4.0368 REMARK 3 L33: 1.4789 L12: 2.2298 REMARK 3 L13: 1.1675 L23: -2.0180 REMARK 3 S TENSOR REMARK 3 S11: -0.5199 S12: 0.0607 S13: -0.2940 REMARK 3 S21: -1.2807 S22: 0.3442 S23: -0.2752 REMARK 3 S31: 0.7366 S32: -1.0567 S33: 0.1757 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 39 C 63 REMARK 3 ORIGIN FOR THE GROUP (A): 29.8460 -28.6410 -72.9500 REMARK 3 T TENSOR REMARK 3 T11: 1.0811 T22: -0.0130 REMARK 3 T33: 0.3730 T12: 0.1407 REMARK 3 T13: 0.1143 T23: -0.0150 REMARK 3 L TENSOR REMARK 3 L11: 2.1873 L22: 0.0561 REMARK 3 L33: 4.8425 L12: 0.7923 REMARK 3 L13: 2.1668 L23: -4.4266 REMARK 3 S TENSOR REMARK 3 S11: -0.3527 S12: 0.0927 S13: -0.2688 REMARK 3 S21: -0.6152 S22: -0.1666 S23: 0.3338 REMARK 3 S31: -0.4783 S32: -0.0386 S33: 0.5192 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 64 C 88 REMARK 3 ORIGIN FOR THE GROUP (A): 33.9580 -29.6880 -94.1330 REMARK 3 T TENSOR REMARK 3 T11: 1.1942 T22: 0.6955 REMARK 3 T33: 1.0139 T12: -0.0149 REMARK 3 T13: -0.1707 T23: -0.1994 REMARK 3 L TENSOR REMARK 3 L11: 0.2670 L22: -4.3112 REMARK 3 L33: 25.3436 L12: -1.5549 REMARK 3 L13: -7.7085 L23: -2.6176 REMARK 3 S TENSOR REMARK 3 S11: -0.1180 S12: 1.5754 S13: 0.3662 REMARK 3 S21: -1.2877 S22: -0.5309 S23: 0.4135 REMARK 3 S31: 1.0339 S32: 0.0807 S33: 0.6489 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 89 C 143 REMARK 3 ORIGIN FOR THE GROUP (A): 34.5690 -14.9020 -69.2340 REMARK 3 T TENSOR REMARK 3 T11: 0.6857 T22: 0.0840 REMARK 3 T33: 0.5201 T12: -0.0413 REMARK 3 T13: 0.2368 T23: 0.0222 REMARK 3 L TENSOR REMARK 3 L11: 2.6545 L22: 2.5820 REMARK 3 L33: 0.9179 L12: -0.6894 REMARK 3 L13: -0.6222 L23: -0.9262 REMARK 3 S TENSOR REMARK 3 S11: 0.4815 S12: -0.0081 S13: 0.0728 REMARK 3 S21: -0.3479 S22: 0.0602 S23: -0.2617 REMARK 3 S31: -0.4072 S32: -0.0482 S33: -0.5417 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 35 D 70 REMARK 3 ORIGIN FOR THE GROUP (A): 45.3940 -29.3390 -66.7720 REMARK 3 T TENSOR REMARK 3 T11: 0.1826 T22: 0.3741 REMARK 3 T33: 0.4292 T12: -0.0649 REMARK 3 T13: 0.1232 T23: 0.0174 REMARK 3 L TENSOR REMARK 3 L11: 1.8033 L22: 6.4571 REMARK 3 L33: 4.7402 L12: -1.7547 REMARK 3 L13: -0.3881 L23: -0.8914 REMARK 3 S TENSOR REMARK 3 S11: -0.0976 S12: -0.1459 S13: -0.2772 REMARK 3 S21: -0.0601 S22: -0.0393 S23: -0.4969 REMARK 3 S31: -0.5102 S32: 0.5660 S33: 0.1369 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 71 D 96 REMARK 3 ORIGIN FOR THE GROUP (A): 32.0360 -35.4690 -64.7460 REMARK 3 T TENSOR REMARK 3 T11: 0.6376 T22: 0.0307 REMARK 3 T33: 0.5027 T12: 0.0537 REMARK 3 T13: 0.1116 T23: -0.0166 REMARK 3 L TENSOR REMARK 3 L11: -0.4528 L22: 4.1732 REMARK 3 L33: 1.0954 L12: -4.7787 REMARK 3 L13: 4.9530 L23: 3.0150 REMARK 3 S TENSOR REMARK 3 S11: 0.0927 S12: -0.2884 S13: -0.4005 REMARK 3 S21: 0.4811 S22: -0.1716 S23: 0.5110 REMARK 3 S31: 0.5996 S32: -0.3884 S33: 0.0789 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 97 D 136 REMARK 3 ORIGIN FOR THE GROUP (A): 38.6810 -37.1810 -79.1340 REMARK 3 T TENSOR REMARK 3 T11: 0.5790 T22: 0.1531 REMARK 3 T33: 0.5538 T12: 0.0135 REMARK 3 T13: 0.2540 T23: -0.0365 REMARK 3 L TENSOR REMARK 3 L11: 3.6901 L22: 3.1890 REMARK 3 L33: 5.7424 L12: -2.6538 REMARK 3 L13: -0.5106 L23: 3.8084 REMARK 3 S TENSOR REMARK 3 S11: -0.3737 S12: 0.2097 S13: -0.2661 REMARK 3 S21: -0.0285 S22: -0.1209 S23: -0.1339 REMARK 3 S31: 0.2912 S32: 0.4377 S33: 0.4946 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES REMARK 4 REMARK 4 3AE8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 04-FEB-10. REMARK 100 THE DEPOSITION ID IS D_1000029142. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-JUN-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL44XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.90000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAC SCIENCE DIP-2040 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21305 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 83.9 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.08600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.2680 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.52 REMARK 200 COMPLETENESS FOR SHELL (%) : 87.5 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : 0.44000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.280 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1ZOY REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.86 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25MM HEPES-NAOH, 8% PEG 4000, 200MM REMARK 280 SUCROSE, 100MM NACL, 10MM CACL2, 0.5MM EDTA, 3% 1,6-HAXANEDIOL, REMARK 280 0.5% N-DECYL-BETA-D-MALTOSIDE, PH 7.2, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 35.82750 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 147.65850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.99700 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 147.65850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 35.82750 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 41.99700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12930 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 42670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -54.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 THESE COMPLEX FORMS MITOCHONDRIAL RESPIRATORY COMPLEX II. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 1 REMARK 465 SER A 2 REMARK 465 ALA A 3 REMARK 465 LYS A 4 REMARK 465 VAL A 5 REMARK 465 SER A 6 REMARK 465 ASP A 7 REMARK 465 ALA A 8 REMARK 465 ILE A 9 REMARK 465 ALA B 1 REMARK 465 GLN B 2 REMARK 465 THR B 3 REMARK 465 ALA B 4 REMARK 465 ALA B 5 REMARK 465 ALA B 6 REMARK 465 THR B 7 REMARK 465 ALA B 8 REMARK 465 LYS B 248 REMARK 465 LYS B 249 REMARK 465 ALA B 250 REMARK 465 SER B 251 REMARK 465 ALA B 252 REMARK 465 LEU C 4 REMARK 465 GLY C 5 REMARK 465 ALA D 34 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 11 -3.72 61.81 REMARK 500 THR A 121 -167.35 -122.44 REMARK 500 VAL A 150 70.19 -102.31 REMARK 500 ALA A 151 61.76 39.13 REMARK 500 ASP A 170 39.42 -82.22 REMARK 500 LYS A 293 -128.05 59.57 REMARK 500 LEU A 295 50.02 -99.30 REMARK 500 ARG A 313 57.60 -97.47 REMARK 500 LYS A 319 77.36 56.75 REMARK 500 ASP A 320 -33.77 -142.67 REMARK 500 HIS A 365 -58.58 -130.33 REMARK 500 ALA A 481 50.16 -114.37 REMARK 500 ALA A 482 -155.84 -78.10 REMARK 500 TRP A 516 72.64 45.25 REMARK 500 LYS A 544 56.90 -106.23 REMARK 500 GLN A 569 -64.75 -169.32 REMARK 500 GLN A 577 30.49 -89.18 REMARK 500 THR B 24 82.33 52.77 REMARK 500 GLU B 54 -55.28 -124.81 REMARK 500 SER B 64 -80.77 -153.72 REMARK 500 ARG B 66 21.94 45.30 REMARK 500 CYS B 70 -36.51 -134.35 REMARK 500 LYS B 109 -153.70 -149.87 REMARK 500 LEU B 111 14.30 59.12 REMARK 500 GLU B 126 80.05 63.94 REMARK 500 LYS B 139 -35.35 -139.62 REMARK 500 PHE B 198 49.51 -89.19 REMARK 500 TYR B 213 20.06 -77.28 REMARK 500 MET B 219 36.29 71.69 REMARK 500 HIS C 29 -71.25 -119.19 REMARK 500 PRO D 64 53.76 -90.20 REMARK 500 ASP D 95 -7.93 62.52 REMARK 500 ALA D 96 -45.40 -147.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 EPH D 1306 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES B 302 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 70 SG REMARK 620 2 FES B 302 S1 115.7 REMARK 620 3 FES B 302 S2 114.2 90.1 REMARK 620 4 CYS B 65 SG 106.9 107.1 122.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES B 302 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 73 SG REMARK 620 2 FES B 302 S1 123.5 REMARK 620 3 FES B 302 S2 113.1 90.2 REMARK 620 4 CYS B 85 SG 103.8 102.8 124.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 B 303 FE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 161 SG REMARK 620 2 SF4 B 303 S1 116.5 REMARK 620 3 SF4 B 303 S2 112.1 105.2 REMARK 620 4 SF4 B 303 S4 112.0 105.0 105.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 B 303 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 164 SG REMARK 620 2 SF4 B 303 S2 121.8 REMARK 620 3 SF4 B 303 S3 112.0 105.5 REMARK 620 4 SF4 B 303 S4 105.9 104.9 105.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 F3S B 304 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 168 SG REMARK 620 2 F3S B 304 S1 112.5 REMARK 620 3 F3S B 304 S2 109.0 116.5 REMARK 620 4 F3S B 304 S3 117.3 101.3 99.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM C1305 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS D 79 NE2 REMARK 620 2 HEM C1305 NA 92.5 REMARK 620 3 HEM C1305 NB 89.3 88.9 REMARK 620 4 HEM C1305 NC 93.0 174.4 90.2 REMARK 620 5 HEM C1305 ND 92.1 90.9 178.6 90.0 REMARK 620 6 HIS C 101 NE2 172.1 90.7 98.0 83.9 80.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 SF4 B 303 FE4 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 158 SG REMARK 620 2 SF4 B 303 S1 127.4 REMARK 620 3 SF4 B 303 S2 107.4 105.1 REMARK 620 4 SF4 B 303 S3 104.7 105.0 105.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 F3S B 304 FE3 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 221 SG REMARK 620 2 F3S B 304 S1 107.1 REMARK 620 3 F3S B 304 S3 134.6 101.4 REMARK 620 4 F3S B 304 S4 99.5 114.6 99.8 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD A 700 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FES B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SF4 B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE F3S B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM C 1305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EPH D 1306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FTN B 1201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3ABV RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEX BOUND WITH ANOTHER INHIBITOR REMARK 900 RELATED ID: 3AE1 RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEX BOUND WITH ANOTHER INHIBITOR REMARK 900 RELATED ID: 3AE2 RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEX BOUND WITH ANOTHER INHIBITOR REMARK 900 RELATED ID: 3AE3 RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEX BOUND WITH ANOTHER INHIBITOR REMARK 900 RELATED ID: 3AE4 RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEX BOUND WITH ANOTHER INHIBITOR REMARK 900 RELATED ID: 3AE5 RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEX BOUND WITH ANOTHER INHIBITOR REMARK 900 RELATED ID: 3AE6 RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEX BOUND WITH ANOTHER INHIBITOR REMARK 900 RELATED ID: 3AE7 RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEX BOUND WITH ANOTHER INHIBITOR REMARK 900 RELATED ID: 3AE9 RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEX BOUND WITH ANOTHER INHIBITOR REMARK 900 RELATED ID: 3AEA RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEX BOUND WITH ANOTHER INHIBITOR REMARK 900 RELATED ID: 3AEB RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEX BOUND WITH ANOTHER INHIBITOR REMARK 900 RELATED ID: 3AEC RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEX BOUND WITH ANOTHER INHIBITOR REMARK 900 RELATED ID: 3AED RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEX BOUND WITH ANOTHER INHIBITOR REMARK 900 RELATED ID: 3AEE RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEX BOUND WITH ANOTHER INHIBITOR REMARK 900 RELATED ID: 3AEF RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEX WITH AN EMPTY QUINONE-BINDING POCKET REMARK 900 RELATED ID: 3AEG RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEX BOUND WITH ANOTHER INHIBITOR REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE SEQUENCE OF CHAIN D IS REFERRED IN REF 2 IN A5GZW8, UNIPROT. DBREF 3AE8 A 1 622 UNP Q0QF01 DHSA_PIG 43 664 DBREF 3AE8 B 1 252 UNP Q007T0 DHSB_PIG 29 280 DBREF 3AE8 C 4 143 UNP D0VWV4 C560_PIG 30 169 DBREF 3AE8 D 34 136 UNP A5GZW8 DHSD_PIG 57 159 SEQRES 1 A 622 SER SER ALA LYS VAL SER ASP ALA ILE SER THR GLN TYR SEQRES 2 A 622 PRO VAL VAL ASP HIS GLU PHE ASP ALA VAL VAL VAL GLY SEQRES 3 A 622 ALA GLY GLY ALA GLY LEU ARG ALA ALA PHE GLY LEU SER SEQRES 4 A 622 GLU ALA GLY PHE ASN THR ALA CYS VAL THR LYS LEU PHE SEQRES 5 A 622 PRO THR ARG SER HIS THR VAL ALA ALA GLN GLY GLY ILE SEQRES 6 A 622 ASN ALA ALA LEU GLY ASN MET GLU GLU ASP ASN TRP ARG SEQRES 7 A 622 TRP HIS PHE TYR ASP THR VAL LYS GLY SER ASP TRP LEU SEQRES 8 A 622 GLY ASP GLN ASP ALA ILE HIS TYR MET THR GLU GLN ALA SEQRES 9 A 622 PRO ALA SER VAL VAL GLU LEU GLU ASN TYR GLY MET PRO SEQRES 10 A 622 PHE SER ARG THR GLU ASP GLY LYS ILE TYR GLN ARG ALA SEQRES 11 A 622 PHE GLY GLY GLN SER LEU LYS PHE GLY LYS GLY GLY GLN SEQRES 12 A 622 ALA HIS ARG CYS CYS CYS VAL ALA ASP ARG THR GLY HIS SEQRES 13 A 622 SER LEU LEU HIS THR LEU TYR GLY ARG SER LEU ARG TYR SEQRES 14 A 622 ASP THR SER TYR PHE VAL GLU TYR PHE ALA LEU ASP LEU SEQRES 15 A 622 LEU MET GLU ASN GLY GLU CYS ARG GLY VAL ILE ALA LEU SEQRES 16 A 622 CYS ILE GLU ASP GLY SER ILE HIS ARG ILE ARG ALA ARG SEQRES 17 A 622 ASN THR VAL VAL ALA THR GLY GLY TYR GLY ARG THR TYR SEQRES 18 A 622 PHE SER CYS THR SER ALA HIS THR SER THR GLY ASP GLY SEQRES 19 A 622 THR ALA MET VAL THR ARG ALA GLY LEU PRO CYS GLN ASP SEQRES 20 A 622 LEU GLU PHE VAL GLN PHE HIS PRO THR GLY ILE TYR GLY SEQRES 21 A 622 ALA GLY CYS LEU ILE THR GLU GLY CYS ARG GLY GLU GLY SEQRES 22 A 622 GLY ILE LEU ILE ASN SER GLN GLY GLU ARG PHE MET GLU SEQRES 23 A 622 ARG TYR ALA PRO VAL ALA LYS ASP LEU ALA SER ARG ASP SEQRES 24 A 622 VAL VAL SER ARG SER MET THR LEU GLU ILE ARG GLU GLY SEQRES 25 A 622 ARG GLY CYS GLY PRO GLU LYS ASP HIS VAL TYR LEU GLN SEQRES 26 A 622 LEU HIS HIS LEU PRO PRO GLU GLN LEU ALA VAL ARG LEU SEQRES 27 A 622 PRO GLY ILE SER GLU THR ALA MET ILE PHE ALA GLY VAL SEQRES 28 A 622 ASP VAL THR LYS GLU PRO ILE PRO VAL LEU PRO THR VAL SEQRES 29 A 622 HIS TYR ASN MET GLY GLY ILE PRO THR ASN TYR LYS GLY SEQRES 30 A 622 GLN VAL LEU ARG HIS VAL ASN GLY GLN ASP GLN VAL VAL SEQRES 31 A 622 PRO GLY LEU TYR ALA CYS GLY GLU ALA ALA CYS ALA SER SEQRES 32 A 622 VAL HIS GLY ALA ASN ARG LEU GLY ALA ASN SER LEU LEU SEQRES 33 A 622 ASP LEU VAL VAL PHE GLY ARG ALA CYS ALA LEU SER ILE SEQRES 34 A 622 ALA GLU SER CYS ARG PRO GLY ASP LYS VAL PRO SER ILE SEQRES 35 A 622 LYS PRO ASN ALA GLY GLU GLU SER VAL MET ASN LEU ASP SEQRES 36 A 622 LYS LEU ARG PHE ALA ASN GLY THR ILE ARG THR SER GLU SEQRES 37 A 622 LEU ARG LEU SER MET GLN LYS SER MET GLN SER HIS ALA SEQRES 38 A 622 ALA VAL PHE ARG VAL GLY SER VAL LEU GLN GLU GLY CYS SEQRES 39 A 622 GLU LYS ILE LEU ARG LEU TYR GLY ASP LEU GLN HIS LEU SEQRES 40 A 622 LYS THR PHE ASP ARG GLY MET VAL TRP ASN THR ASP LEU SEQRES 41 A 622 VAL GLU THR LEU GLU LEU GLN ASN LEU MET LEU CYS ALA SEQRES 42 A 622 LEU GLN THR ILE TYR GLY ALA GLU ALA ARG LYS GLU SER SEQRES 43 A 622 ARG GLY ALA HIS ALA ARG GLU ASP PHE LYS GLU ARG VAL SEQRES 44 A 622 ASP GLU TYR ASP TYR SER LYS PRO ILE GLN GLY GLN GLN SEQRES 45 A 622 LYS LYS PRO PHE GLN GLU HIS TRP ARG LYS HIS THR LEU SEQRES 46 A 622 SER TYR VAL ASP VAL LYS THR GLY LYS VAL SER LEU GLU SEQRES 47 A 622 TYR ARG PRO VAL ILE ASP LYS THR LEU ASN GLU ALA ASP SEQRES 48 A 622 CYS ALA THR VAL PRO PRO ALA ILE ARG SER TYR SEQRES 1 B 252 ALA GLN THR ALA ALA ALA THR ALA PRO ARG ILE LYS LYS SEQRES 2 B 252 PHE ALA ILE TYR ARG TRP ASP PRO ASP LYS THR GLY ASP SEQRES 3 B 252 LYS PRO HIS MET GLN THR TYR GLU ILE ASP LEU ASN ASN SEQRES 4 B 252 CYS GLY PRO MET VAL LEU ASP ALA LEU ILE LYS ILE LYS SEQRES 5 B 252 ASN GLU ILE ASP SER THR LEU THR PHE ARG ARG SER CYS SEQRES 6 B 252 ARG GLU GLY ILE CYS GLY SER CYS ALA MET ASN ILE ASN SEQRES 7 B 252 GLY GLY ASN THR LEU ALA CYS THR ARG ARG ILE ASP THR SEQRES 8 B 252 ASN LEU ASP LYS VAL SER LYS ILE TYR PRO LEU PRO HIS SEQRES 9 B 252 MET TYR VAL ILE LYS ASP LEU VAL PRO ASP LEU SER ASN SEQRES 10 B 252 PHE TYR ALA GLN TYR LYS SER ILE GLU PRO TYR LEU LYS SEQRES 11 B 252 LYS LYS ASP GLU SER GLN GLU GLY LYS GLN GLN TYR LEU SEQRES 12 B 252 GLN SER ILE GLU GLU ARG GLU LYS LEU ASP GLY LEU TYR SEQRES 13 B 252 GLU CYS ILE LEU CYS ALA CYS CYS SER THR SER CYS PRO SEQRES 14 B 252 SER TYR TRP TRP ASN GLY ASP LYS TYR LEU GLY PRO ALA SEQRES 15 B 252 VAL LEU MET GLN ALA TYR ARG TRP MET ILE ASP SER ARG SEQRES 16 B 252 ASP ASP PHE THR GLU GLU ARG LEU ALA LYS LEU GLN ASP SEQRES 17 B 252 PRO PHE SER LEU TYR ARG CYS HIS THR ILE MET ASN CYS SEQRES 18 B 252 THR GLY THR CYS PRO LYS GLY LEU ASN PRO GLY LYS ALA SEQRES 19 B 252 ILE ALA GLU ILE LYS LYS MET MET ALA THR TYR LYS GLU SEQRES 20 B 252 LYS LYS ALA SER ALA SEQRES 1 C 140 LEU GLY THR THR ALA LYS GLU GLU MET GLU ARG PHE TRP SEQRES 2 C 140 ASN LYS ASN LEU GLY SER ASN ARG PRO LEU SER PRO HIS SEQRES 3 C 140 ILE THR ILE TYR ARG TRP SER LEU PRO MET ALA MET SER SEQRES 4 C 140 ILE CYS HIS ARG GLY THR GLY ILE ALA LEU SER ALA GLY SEQRES 5 C 140 VAL SER LEU PHE GLY LEU SER ALA LEU LEU LEU PRO GLY SEQRES 6 C 140 ASN PHE GLU SER HIS LEU GLU LEU VAL LYS SER LEU CYS SEQRES 7 C 140 LEU GLY PRO THR LEU ILE TYR THR ALA LYS PHE GLY ILE SEQRES 8 C 140 VAL PHE PRO LEU MET TYR HIS THR TRP ASN GLY ILE ARG SEQRES 9 C 140 HIS LEU ILE TRP ASP LEU GLY LYS GLY LEU THR ILE PRO SEQRES 10 C 140 GLN LEU THR GLN SER GLY VAL VAL VAL LEU ILE LEU THR SEQRES 11 C 140 VAL LEU SER SER VAL GLY LEU ALA ALA MET SEQRES 1 D 103 ALA SER SER LYS ALA ALA SER LEU HIS TRP THR GLY GLU SEQRES 2 D 103 ARG VAL VAL SER VAL LEU LEU LEU GLY LEU LEU PRO ALA SEQRES 3 D 103 ALA TYR LEU ASN PRO CYS SER ALA MET ASP TYR SER LEU SEQRES 4 D 103 ALA ALA ALA LEU THR LEU HIS GLY HIS TRP GLY ILE GLY SEQRES 5 D 103 GLN VAL VAL THR ASP TYR VAL ARG GLY ASP ALA LEU GLN SEQRES 6 D 103 LYS ALA ALA LYS ALA GLY LEU LEU ALA LEU SER ALA PHE SEQRES 7 D 103 THR PHE ALA GLY LEU CYS TYR PHE ASN TYR HIS ASP VAL SEQRES 8 D 103 GLY ILE CYS LYS ALA VAL ALA MET LEU TRP LYS LEU HET FAD A 700 53 HET FES B 302 4 HET SF4 B 303 8 HET F3S B 304 7 HET FTN B1201 23 HET HEM C1305 43 HET EPH D1306 44 HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM FES FE2/S2 (INORGANIC) CLUSTER HETNAM SF4 IRON/SULFUR CLUSTER HETNAM F3S FE3-S4 CLUSTER HETNAM FTN N-[3-(1-METHYLETHOXY)PHENYL]-2-(TRIFLUOROMETHYL) HETNAM 2 FTN BENZAMIDE HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETNAM EPH L-ALPHA-PHOSPHATIDYL-BETA-OLEOYL-GAMMA-PALMITOYL- HETNAM 2 EPH PHOSPHATIDYLETHANOLAMINE HETSYN FTN FLUTOLANIL, N-(3-ISOPROPOXY-PHENYL)-2- HETSYN 2 FTN TRIFLUOROMETHYLBENZAMIDE HETSYN HEM HEME FORMUL 5 FAD C27 H33 N9 O15 P2 FORMUL 6 FES FE2 S2 FORMUL 7 SF4 FE4 S4 FORMUL 8 F3S FE3 S4 FORMUL 9 FTN C17 H16 F3 N O2 FORMUL 10 HEM C34 H32 FE N4 O4 FORMUL 11 EPH C39 H68 N O8 P HELIX 1 1 GLY A 28 GLY A 42 1 15 HELIX 2 2 PHE A 52 ALA A 61 5 10 HELIX 3 3 ASN A 76 SER A 88 1 13 HELIX 4 4 ASP A 93 GLN A 103 1 11 HELIX 5 5 GLN A 103 GLY A 115 1 13 HELIX 6 6 LYS A 137 LYS A 140 5 4 HELIX 7 7 ARG A 153 LEU A 167 1 15 HELIX 8 8 TYR A 217 TYR A 221 5 5 HELIX 9 9 GLY A 234 ALA A 241 1 8 HELIX 10 10 GLU A 267 GLY A 273 1 7 HELIX 11 11 PHE A 284 ALA A 289 1 6 HELIX 12 12 SER A 297 GLU A 311 1 15 HELIX 13 13 PRO A 330 ALA A 335 1 6 HELIX 14 14 LEU A 338 ALA A 349 1 12 HELIX 15 15 ASN A 413 GLU A 431 1 19 HELIX 16 16 GLY A 447 PHE A 459 1 13 HELIX 17 17 THR A 466 ALA A 481 1 16 HELIX 18 18 VAL A 486 GLY A 502 1 17 HELIX 19 19 ASN A 517 ARG A 543 1 27 HELIX 20 20 ASN B 38 CYS B 40 5 3 HELIX 21 21 MET B 43 GLU B 54 1 12 HELIX 22 22 LEU B 115 ILE B 125 1 11 HELIX 23 23 SER B 145 GLU B 150 1 6 HELIX 24 24 ALA B 162 CYS B 168 1 7 HELIX 25 25 CYS B 168 ASN B 174 1 7 HELIX 26 26 GLY B 180 TRP B 190 1 11 HELIX 27 27 PHE B 198 LYS B 205 1 8 HELIX 28 28 MET B 219 CYS B 225 1 7 HELIX 29 29 ASN B 230 ALA B 243 1 14 HELIX 30 30 THR C 7 LEU C 20 1 14 HELIX 31 31 SER C 36 LEU C 66 1 31 HELIX 32 32 ASN C 69 LEU C 80 1 12 HELIX 33 33 GLY C 83 LEU C 113 1 31 HELIX 34 34 THR C 118 ALA C 142 1 25 HELIX 35 35 LYS D 37 ASN D 63 1 27 HELIX 36 36 CYS D 65 VAL D 92 1 28 HELIX 37 37 ALA D 96 ASP D 123 1 28 HELIX 38 38 GLY D 125 LYS D 135 1 11 SHEET 1 A 4 VAL A 15 GLU A 19 0 SHEET 2 A 4 ILE A 202 ARG A 206 1 O ARG A 204 N HIS A 18 SHEET 3 A 4 GLU A 188 CYS A 196 -1 N ALA A 194 O HIS A 203 SHEET 4 A 4 TYR A 177 GLU A 185 -1 N PHE A 178 O LEU A 195 SHEET 1 B 6 SER A 172 VAL A 175 0 SHEET 2 B 6 THR A 45 THR A 49 1 N CYS A 47 O PHE A 174 SHEET 3 B 6 ALA A 22 VAL A 25 1 N ALA A 22 O ALA A 46 SHEET 4 B 6 ASN A 209 VAL A 212 1 O VAL A 211 N VAL A 23 SHEET 5 B 6 GLN A 386 ALA A 395 1 O TYR A 394 N THR A 210 SHEET 6 B 6 GLN A 378 VAL A 383 -1 N VAL A 379 O VAL A 390 SHEET 1 C 3 ILE A 65 ASN A 66 0 SHEET 2 C 3 GLN A 143 CYS A 148 -1 O CYS A 148 N ILE A 65 SHEET 3 C 3 GLN A 128 SER A 135 -1 N ARG A 129 O CYS A 147 SHEET 1 D 3 CYS A 245 GLN A 246 0 SHEET 2 D 3 LYS A 582 VAL A 588 -1 O SER A 586 N CYS A 245 SHEET 3 D 3 VAL A 595 PRO A 601 -1 O SER A 596 N TYR A 587 SHEET 1 E 2 VAL A 251 HIS A 254 0 SHEET 2 E 2 THR A 363 ASN A 367 -1 O HIS A 365 N GLN A 252 SHEET 1 F 3 ILE A 275 ILE A 277 0 SHEET 2 F 3 VAL A 322 GLN A 325 -1 O GLN A 325 N ILE A 275 SHEET 3 F 3 ILE A 358 VAL A 360 -1 O ILE A 358 N LEU A 324 SHEET 1 G 2 ILE A 371 PRO A 372 0 SHEET 2 G 2 ALA A 400 CYS A 401 1 O CYS A 401 N ILE A 371 SHEET 1 H 2 ILE A 464 ARG A 465 0 SHEET 2 H 2 LEU A 507 LYS A 508 1 O LYS A 508 N ILE A 464 SHEET 1 I 2 PHE A 484 ARG A 485 0 SHEET 2 I 2 ALA A 551 ARG A 552 1 O ALA A 551 N ARG A 485 SHEET 1 J 5 HIS B 29 ASP B 36 0 SHEET 2 J 5 ILE B 11 ARG B 18 -1 N PHE B 14 O TYR B 33 SHEET 3 J 5 SER B 97 TYR B 100 1 O ILE B 99 N ALA B 15 SHEET 4 J 5 ALA B 74 ILE B 77 -1 N ASN B 76 O TYR B 100 SHEET 5 J 5 GLY B 80 LEU B 83 -1 O GLY B 80 N ILE B 77 SHEET 1 K 2 VAL B 107 LYS B 109 0 SHEET 2 K 2 VAL B 112 PRO B 113 -1 O VAL B 112 N ILE B 108 LINK NE2 HIS A 57 C8M FAD A 700 1555 1555 1.99 LINK SG CYS B 70 FE1 FES B 302 1555 1555 2.09 LINK SG CYS B 73 FE2 FES B 302 1555 1555 2.11 LINK SG CYS B 161 FE3 SF4 B 303 1555 1555 2.11 LINK SG CYS B 164 FE1 SF4 B 303 1555 1555 2.15 LINK SG CYS B 168 FE1 F3S B 304 1555 1555 2.15 LINK NE2 HIS D 79 FE HEM C1305 1555 1555 2.16 LINK SG CYS B 158 FE4 SF4 B 303 1555 1555 2.29 LINK NE2 HIS C 101 FE HEM C1305 1555 1555 2.30 LINK SG CYS B 65 FE1 FES B 302 1555 1555 2.34 LINK SG CYS B 85 FE2 FES B 302 1555 1555 2.45 LINK SG CYS B 221 FE3 F3S B 304 1555 1555 2.47 SITE 1 AC1 29 GLY A 26 GLY A 28 GLY A 29 ALA A 30 SITE 2 AC1 29 THR A 49 LYS A 50 LEU A 51 SER A 56 SITE 3 AC1 29 HIS A 57 THR A 58 ALA A 60 ALA A 61 SITE 4 AC1 29 GLN A 62 GLY A 63 GLY A 64 TYR A 177 SITE 5 AC1 29 PHE A 178 ALA A 179 GLY A 215 THR A 225 SITE 6 AC1 29 ASP A 233 LEU A 264 TYR A 366 GLU A 398 SITE 7 AC1 29 ARG A 409 ALA A 412 SER A 414 LEU A 415 SITE 8 AC1 29 LEU A 418 SITE 1 AC2 7 SER B 64 CYS B 65 ARG B 66 CYS B 70 SITE 2 AC2 7 GLY B 71 CYS B 73 CYS B 85 SITE 1 AC3 9 CYS B 158 ILE B 159 LEU B 160 CYS B 161 SITE 2 AC3 9 ALA B 162 CYS B 164 ALA B 182 CYS B 225 SITE 3 AC3 9 PRO B 226 SITE 1 AC4 8 CYS B 168 TYR B 178 PRO B 181 CYS B 215 SITE 2 AC4 8 HIS B 216 MET B 219 ASN B 220 CYS B 221 SITE 1 AC5 14 HIS C 45 ARG C 46 GLY C 49 LEU C 52 SITE 2 AC5 14 SER C 53 HIS C 101 HIS C 108 ARG D 47 SITE 3 AC5 14 LEU D 53 LEU D 54 LEU D 57 LEU D 76 SITE 4 AC5 14 HIS D 79 GLY D 83 SITE 1 AC6 6 MET C 143 ALA D 60 TYR D 61 CYS D 127 SITE 2 AC6 6 ALA D 131 TRP D 134 SITE 1 AC7 12 PRO B 169 SER B 170 TRP B 173 HIS B 216 SITE 2 AC7 12 ILE B 218 ILE C 30 TRP C 35 SER C 42 SITE 3 AC7 12 ILE C 43 ARG C 46 ASP D 90 TYR D 91 CRYST1 71.655 83.994 295.317 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013956 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011906 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003386 0.00000