HEADER TRANSFERASE 05-OCT-07 2RH5 TITLE STRUCTURE OF APO ADENYLATE KINASE FROM AQUIFEX AEOLICUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: ADENYLATE KINASE; COMPND 3 CHAIN: A, C, B; COMPND 4 SYNONYM: ATP-AMP TRANSPHOSPHORYLASE; COMPND 5 EC: 2.7.4.3; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AQUIFEX AEOLICUS; SOURCE 3 ORGANISM_TAXID: 63363; SOURCE 4 GENE: ADK; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET3A KEYWDS TRANSFERASE(PHOSPHOTRANSFERASE), ATP-BINDING, CYTOPLASM, KINASE, KEYWDS 2 NUCLEOTIDE-BINDING, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR V.THAI,M.WOLF-WATZ,T.FENN,E.POZHARSKI,M.A.WILSON,G.A.PETSKO,D.KERN REVDAT 5 21-FEB-24 2RH5 1 REMARK REVDAT 4 24-JAN-18 2RH5 1 AUTHOR REVDAT 3 25-OCT-17 2RH5 1 REMARK REVDAT 2 24-FEB-09 2RH5 1 VERSN REVDAT 1 18-DEC-07 2RH5 0 JRNL AUTH K.A.HENZLER-WILDMAN,V.THAI,M.LEI,M.OTT,M.WOLF-WATZ,T.FENN, JRNL AUTH 2 E.POZHARSKI,M.A.WILSON,G.A.PETSKO,M.KARPLUS,C.G.HUBNER, JRNL AUTH 3 D.KERN JRNL TITL INTRINSIC MOTIONS ALONG AN ENZYMATIC REACTION TRAJECTORY. JRNL REF NATURE V. 450 838 2007 JRNL REFN ISSN 0028-0836 JRNL PMID 18026086 JRNL DOI 10.1038/NATURE06410 REMARK 2 REMARK 2 RESOLUTION. 2.48 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.48 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.14 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.3 REMARK 3 NUMBER OF REFLECTIONS : 22909 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.255 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 1096 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.48 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.55 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1350 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 82.62 REMARK 3 BIN R VALUE (WORKING SET) : 0.3090 REMARK 3 BIN FREE R VALUE SET COUNT : 67 REMARK 3 BIN FREE R VALUE : 0.4060 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4842 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 25 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 46.44 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.25000 REMARK 3 B22 (A**2) : 0.44000 REMARK 3 B33 (A**2) : -0.69000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.735 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.312 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.240 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 23.446 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.922 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4938 ; 0.010 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6660 ; 1.268 ; 2.009 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 603 ; 5.059 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 213 ;36.560 ;24.225 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 960 ;18.078 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 36 ;19.306 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 744 ; 0.087 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3654 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1951 ; 0.207 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3312 ; 0.309 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 111 ; 0.129 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 52 ; 0.169 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 9 ; 0.188 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3121 ; 0.454 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4938 ; 0.767 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2003 ; 1.345 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1722 ; 2.310 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 29 REMARK 3 RESIDUE RANGE : A 72 A 110 REMARK 3 RESIDUE RANGE : A 170 A 202 REMARK 3 ORIGIN FOR THE GROUP (A): 10.6593 14.7321 2.5980 REMARK 3 T TENSOR REMARK 3 T11: -0.2605 T22: -0.1940 REMARK 3 T33: -0.2293 T12: -0.0407 REMARK 3 T13: 0.0533 T23: -0.0088 REMARK 3 L TENSOR REMARK 3 L11: 2.6523 L22: 3.6971 REMARK 3 L33: 2.8091 L12: -1.0397 REMARK 3 L13: 0.3991 L23: 0.3263 REMARK 3 S TENSOR REMARK 3 S11: 0.0232 S12: 0.1575 S13: 0.0896 REMARK 3 S21: -0.1737 S22: 0.0635 S23: -0.2117 REMARK 3 S31: -0.2149 S32: 0.3530 S33: -0.0867 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 29 REMARK 3 RESIDUE RANGE : C 72 C 110 REMARK 3 RESIDUE RANGE : C 170 C 202 REMARK 3 ORIGIN FOR THE GROUP (A): 55.8671 16.6408 35.7610 REMARK 3 T TENSOR REMARK 3 T11: -0.1397 T22: -0.1643 REMARK 3 T33: -0.0212 T12: 0.0518 REMARK 3 T13: -0.0210 T23: 0.0124 REMARK 3 L TENSOR REMARK 3 L11: 2.6834 L22: 2.7013 REMARK 3 L33: 6.8452 L12: -0.1020 REMARK 3 L13: -0.0242 L23: 1.2564 REMARK 3 S TENSOR REMARK 3 S11: -0.1502 S12: -0.0246 S13: -0.2697 REMARK 3 S21: 0.2003 S22: 0.1344 S23: -0.4288 REMARK 3 S31: 0.3784 S32: 0.3803 S33: 0.0158 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 29 REMARK 3 RESIDUE RANGE : B 72 B 110 REMARK 3 RESIDUE RANGE : B 170 B 202 REMARK 3 ORIGIN FOR THE GROUP (A): 32.8610 28.0618 67.2246 REMARK 3 T TENSOR REMARK 3 T11: 0.2561 T22: 0.3481 REMARK 3 T33: 0.0826 T12: -0.0609 REMARK 3 T13: 0.0285 T23: -0.0717 REMARK 3 L TENSOR REMARK 3 L11: 3.7351 L22: 5.6066 REMARK 3 L33: 3.8410 L12: 1.9860 REMARK 3 L13: -0.6041 L23: -1.2960 REMARK 3 S TENSOR REMARK 3 S11: 0.4424 S12: -1.0242 S13: 0.2670 REMARK 3 S21: 0.9853 S22: -0.2994 S23: 0.4821 REMARK 3 S31: -0.5749 S32: -0.4922 S33: -0.1431 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 111 A 169 REMARK 3 ORIGIN FOR THE GROUP (A): -13.2767 21.1346 7.8101 REMARK 3 T TENSOR REMARK 3 T11: -0.1160 T22: -0.1703 REMARK 3 T33: -0.1632 T12: 0.0606 REMARK 3 T13: 0.0423 T23: 0.0046 REMARK 3 L TENSOR REMARK 3 L11: 11.1912 L22: 3.0779 REMARK 3 L33: 2.0520 L12: 2.2218 REMARK 3 L13: -0.4061 L23: 0.0855 REMARK 3 S TENSOR REMARK 3 S11: 0.1133 S12: -0.6038 S13: -0.0730 REMARK 3 S21: 0.3203 S22: -0.1431 S23: 0.2222 REMARK 3 S31: -0.2129 S32: -0.3529 S33: 0.0298 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 111 C 169 REMARK 3 ORIGIN FOR THE GROUP (A): 54.8540 39.4874 40.4784 REMARK 3 T TENSOR REMARK 3 T11: 0.1648 T22: 0.0202 REMARK 3 T33: 0.0266 T12: -0.0039 REMARK 3 T13: -0.0893 T23: -0.1007 REMARK 3 L TENSOR REMARK 3 L11: 2.4206 L22: 13.5456 REMARK 3 L33: 2.6626 L12: -1.5142 REMARK 3 L13: -0.5551 L23: -4.3087 REMARK 3 S TENSOR REMARK 3 S11: 0.3047 S12: 0.2056 S13: 0.2420 REMARK 3 S21: -1.2363 S22: -0.0250 S23: -0.0794 REMARK 3 S31: 0.0861 S32: 0.2391 S33: -0.2797 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 111 B 169 REMARK 3 ORIGIN FOR THE GROUP (A): 23.0370 9.7901 54.1136 REMARK 3 T TENSOR REMARK 3 T11: -0.0553 T22: -0.0437 REMARK 3 T33: 0.0515 T12: -0.0662 REMARK 3 T13: -0.0056 T23: 0.0116 REMARK 3 L TENSOR REMARK 3 L11: 10.1898 L22: 3.5702 REMARK 3 L33: 4.0272 L12: 1.7609 REMARK 3 L13: 4.0516 L23: 1.0338 REMARK 3 S TENSOR REMARK 3 S11: 0.0733 S12: -0.0336 S13: -0.5044 REMARK 3 S21: -0.0499 S22: 0.0605 S23: -0.6312 REMARK 3 S31: 0.1438 S32: 0.4711 S33: -0.1338 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 30 A 71 REMARK 3 ORIGIN FOR THE GROUP (A): 8.6821 7.5819 23.4668 REMARK 3 T TENSOR REMARK 3 T11: -0.2646 T22: -0.1579 REMARK 3 T33: -0.1736 T12: 0.0195 REMARK 3 T13: -0.0111 T23: -0.0080 REMARK 3 L TENSOR REMARK 3 L11: 4.6755 L22: 4.7704 REMARK 3 L33: 5.6629 L12: 1.2228 REMARK 3 L13: -1.5482 L23: 0.5734 REMARK 3 S TENSOR REMARK 3 S11: -0.1189 S12: -0.0014 S13: -0.2229 REMARK 3 S21: 0.1913 S22: -0.0213 S23: 0.0792 REMARK 3 S31: 0.2353 S32: -0.0033 S33: 0.1402 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 30 C 71 REMARK 3 ORIGIN FOR THE GROUP (A): 35.1524 22.4283 34.3829 REMARK 3 T TENSOR REMARK 3 T11: -0.0944 T22: -0.0225 REMARK 3 T33: 0.1086 T12: -0.0551 REMARK 3 T13: -0.0208 T23: 0.0575 REMARK 3 L TENSOR REMARK 3 L11: 15.4801 L22: 4.2348 REMARK 3 L33: 5.6011 L12: 0.5931 REMARK 3 L13: -1.8735 L23: 0.5930 REMARK 3 S TENSOR REMARK 3 S11: -0.1672 S12: 0.2947 S13: 1.1549 REMARK 3 S21: -0.2529 S22: 0.0672 S23: 0.7885 REMARK 3 S31: -0.5257 S32: -0.1602 S33: 0.1000 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 30 B 71 REMARK 3 ORIGIN FOR THE GROUP (A): 35.9695 35.6265 47.2493 REMARK 3 T TENSOR REMARK 3 T11: 0.0887 T22: 0.1477 REMARK 3 T33: 0.1379 T12: 0.0779 REMARK 3 T13: -0.0815 T23: -0.0252 REMARK 3 L TENSOR REMARK 3 L11: 5.6148 L22: 4.9236 REMARK 3 L33: 10.2680 L12: 2.6869 REMARK 3 L13: -2.5200 L23: 1.9477 REMARK 3 S TENSOR REMARK 3 S11: 0.0896 S12: 0.7492 S13: 0.5665 REMARK 3 S21: -0.0366 S22: -0.2250 S23: 0.4166 REMARK 3 S31: -0.8795 S32: -1.2538 S33: 0.1354 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2RH5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-OCT-07. REMARK 100 THE DEPOSITION ID IS D_1000044853. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 298 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU300 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24570 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.480 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.4 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.07600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.4 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.88500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.77 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.55 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 28-30% (W/V) PEG 3000, 200 MM SODIUM REMARK 280 ACETATE, AND 100 MM TRIS, PH 8.5, VAPOR DIFFUSION, TEMPERATURE REMARK 280 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 42.35350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 42.35350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 53.34050 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 78.79800 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 53.34050 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 78.79800 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 42.35350 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 53.34050 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 78.79800 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 42.35350 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 53.34050 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 78.79800 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 203 REMARK 465 ASP A 204 REMARK 465 GLY A 205 REMARK 465 ASN A 206 REMARK 465 GLY C 203 REMARK 465 ASP C 204 REMARK 465 GLY C 205 REMARK 465 ASN C 206 REMARK 465 GLY B 203 REMARK 465 ASP B 204 REMARK 465 GLY B 205 REMARK 465 ASN B 206 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 130 -46.14 -149.08 REMARK 500 ASN A 139 77.75 -153.46 REMARK 500 LYS C 137 -64.09 -90.80 REMARK 500 ASN C 139 72.74 -112.94 REMARK 500 LYS B 179 -18.30 178.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2RGX RELATED DB: PDB DBREF 2RH5 A 1 206 UNP O66490 KAD_AQUAE 1 206 DBREF 2RH5 C 1 206 UNP O66490 KAD_AQUAE 1 206 DBREF 2RH5 B 1 206 UNP O66490 KAD_AQUAE 1 206 SEQRES 1 A 206 MET ILE LEU VAL PHE LEU GLY PRO PRO GLY ALA GLY LYS SEQRES 2 A 206 GLY THR GLN ALA LYS ARG LEU ALA LYS GLU LYS GLY PHE SEQRES 3 A 206 VAL HIS ILE SER THR GLY ASP ILE LEU ARG GLU ALA VAL SEQRES 4 A 206 GLN LYS GLY THR PRO LEU GLY LYS LYS ALA LYS GLU TYR SEQRES 5 A 206 MET GLU ARG GLY GLU LEU VAL PRO ASP ASP LEU ILE ILE SEQRES 6 A 206 ALA LEU ILE GLU GLU VAL PHE PRO LYS HIS GLY ASN VAL SEQRES 7 A 206 ILE PHE ASP GLY PHE PRO ARG THR VAL LYS GLN ALA GLU SEQRES 8 A 206 ALA LEU ASP GLU MET LEU GLU LYS LYS GLY LEU LYS VAL SEQRES 9 A 206 ASP HIS VAL LEU LEU PHE GLU VAL PRO ASP GLU VAL VAL SEQRES 10 A 206 ILE GLU ARG LEU SER GLY ARG ARG ILE ASN PRO GLU THR SEQRES 11 A 206 GLY GLU VAL TYR HIS VAL LYS TYR ASN PRO PRO PRO PRO SEQRES 12 A 206 GLY VAL LYS VAL ILE GLN ARG GLU ASP ASP LYS PRO GLU SEQRES 13 A 206 VAL ILE LYS LYS ARG LEU GLU VAL TYR ARG GLU GLN THR SEQRES 14 A 206 ALA PRO LEU ILE GLU TYR TYR LYS LYS LYS GLY ILE LEU SEQRES 15 A 206 ARG ILE ILE ASP ALA SER LYS PRO VAL GLU GLU VAL TYR SEQRES 16 A 206 ARG GLN VAL LEU GLU VAL ILE GLY ASP GLY ASN SEQRES 1 C 206 MET ILE LEU VAL PHE LEU GLY PRO PRO GLY ALA GLY LYS SEQRES 2 C 206 GLY THR GLN ALA LYS ARG LEU ALA LYS GLU LYS GLY PHE SEQRES 3 C 206 VAL HIS ILE SER THR GLY ASP ILE LEU ARG GLU ALA VAL SEQRES 4 C 206 GLN LYS GLY THR PRO LEU GLY LYS LYS ALA LYS GLU TYR SEQRES 5 C 206 MET GLU ARG GLY GLU LEU VAL PRO ASP ASP LEU ILE ILE SEQRES 6 C 206 ALA LEU ILE GLU GLU VAL PHE PRO LYS HIS GLY ASN VAL SEQRES 7 C 206 ILE PHE ASP GLY PHE PRO ARG THR VAL LYS GLN ALA GLU SEQRES 8 C 206 ALA LEU ASP GLU MET LEU GLU LYS LYS GLY LEU LYS VAL SEQRES 9 C 206 ASP HIS VAL LEU LEU PHE GLU VAL PRO ASP GLU VAL VAL SEQRES 10 C 206 ILE GLU ARG LEU SER GLY ARG ARG ILE ASN PRO GLU THR SEQRES 11 C 206 GLY GLU VAL TYR HIS VAL LYS TYR ASN PRO PRO PRO PRO SEQRES 12 C 206 GLY VAL LYS VAL ILE GLN ARG GLU ASP ASP LYS PRO GLU SEQRES 13 C 206 VAL ILE LYS LYS ARG LEU GLU VAL TYR ARG GLU GLN THR SEQRES 14 C 206 ALA PRO LEU ILE GLU TYR TYR LYS LYS LYS GLY ILE LEU SEQRES 15 C 206 ARG ILE ILE ASP ALA SER LYS PRO VAL GLU GLU VAL TYR SEQRES 16 C 206 ARG GLN VAL LEU GLU VAL ILE GLY ASP GLY ASN SEQRES 1 B 206 MET ILE LEU VAL PHE LEU GLY PRO PRO GLY ALA GLY LYS SEQRES 2 B 206 GLY THR GLN ALA LYS ARG LEU ALA LYS GLU LYS GLY PHE SEQRES 3 B 206 VAL HIS ILE SER THR GLY ASP ILE LEU ARG GLU ALA VAL SEQRES 4 B 206 GLN LYS GLY THR PRO LEU GLY LYS LYS ALA LYS GLU TYR SEQRES 5 B 206 MET GLU ARG GLY GLU LEU VAL PRO ASP ASP LEU ILE ILE SEQRES 6 B 206 ALA LEU ILE GLU GLU VAL PHE PRO LYS HIS GLY ASN VAL SEQRES 7 B 206 ILE PHE ASP GLY PHE PRO ARG THR VAL LYS GLN ALA GLU SEQRES 8 B 206 ALA LEU ASP GLU MET LEU GLU LYS LYS GLY LEU LYS VAL SEQRES 9 B 206 ASP HIS VAL LEU LEU PHE GLU VAL PRO ASP GLU VAL VAL SEQRES 10 B 206 ILE GLU ARG LEU SER GLY ARG ARG ILE ASN PRO GLU THR SEQRES 11 B 206 GLY GLU VAL TYR HIS VAL LYS TYR ASN PRO PRO PRO PRO SEQRES 12 B 206 GLY VAL LYS VAL ILE GLN ARG GLU ASP ASP LYS PRO GLU SEQRES 13 B 206 VAL ILE LYS LYS ARG LEU GLU VAL TYR ARG GLU GLN THR SEQRES 14 B 206 ALA PRO LEU ILE GLU TYR TYR LYS LYS LYS GLY ILE LEU SEQRES 15 B 206 ARG ILE ILE ASP ALA SER LYS PRO VAL GLU GLU VAL TYR SEQRES 16 B 206 ARG GLN VAL LEU GLU VAL ILE GLY ASP GLY ASN FORMUL 4 HOH *25(H2 O) HELIX 1 1 GLY A 12 GLY A 25 1 14 HELIX 2 2 SER A 30 GLY A 42 1 13 HELIX 3 3 THR A 43 GLY A 56 1 14 HELIX 4 4 PRO A 60 PHE A 72 1 13 HELIX 5 5 THR A 86 LYS A 99 1 14 HELIX 6 6 PRO A 113 GLY A 123 1 11 HELIX 7 7 ARG A 150 ASP A 153 5 4 HELIX 8 8 LYS A 154 LYS A 179 1 26 HELIX 9 9 PRO A 190 ILE A 202 1 13 HELIX 10 10 GLY C 12 GLY C 25 1 14 HELIX 11 11 SER C 30 GLY C 42 1 13 HELIX 12 12 THR C 43 ARG C 55 1 13 HELIX 13 13 PRO C 60 PHE C 72 1 13 HELIX 14 14 THR C 86 LYS C 99 1 14 HELIX 15 15 PRO C 113 SER C 122 1 10 HELIX 16 16 ARG C 150 ASP C 153 5 4 HELIX 17 17 LYS C 154 GLY C 180 1 27 HELIX 18 18 PRO C 190 VAL C 201 1 12 HELIX 19 19 GLY B 12 GLY B 25 1 14 HELIX 20 20 SER B 30 GLY B 42 1 13 HELIX 21 21 THR B 43 ARG B 55 1 13 HELIX 22 22 PRO B 60 VAL B 71 1 12 HELIX 23 23 THR B 86 LYS B 99 1 14 HELIX 24 24 PRO B 113 GLY B 123 1 11 HELIX 25 25 ARG B 150 ASP B 153 5 4 HELIX 26 26 LYS B 154 LYS B 178 1 25 HELIX 27 27 PRO B 190 ILE B 202 1 13 SHEET 1 A 5 VAL A 27 ILE A 29 0 SHEET 2 A 5 VAL A 78 ASP A 81 1 O ILE A 79 N ILE A 29 SHEET 3 A 5 ILE A 2 LEU A 6 1 N LEU A 3 O PHE A 80 SHEET 4 A 5 HIS A 106 GLU A 111 1 O LEU A 108 N VAL A 4 SHEET 5 A 5 LEU A 182 ASP A 186 1 O ARG A 183 N VAL A 107 SHEET 1 B 2 ARG A 124 ILE A 126 0 SHEET 2 B 2 VAL A 133 HIS A 135 -1 O TYR A 134 N ARG A 125 SHEET 1 C 5 VAL C 27 ILE C 29 0 SHEET 2 C 5 VAL C 78 ASP C 81 1 O ILE C 79 N ILE C 29 SHEET 3 C 5 ILE C 2 LEU C 6 1 N LEU C 3 O PHE C 80 SHEET 4 C 5 HIS C 106 GLU C 111 1 O LEU C 108 N VAL C 4 SHEET 5 C 5 LEU C 182 ASP C 186 1 O ARG C 183 N LEU C 109 SHEET 1 D 2 ARG C 124 ILE C 126 0 SHEET 2 D 2 VAL C 133 HIS C 135 -1 O TYR C 134 N ARG C 125 SHEET 1 E 5 VAL B 27 ILE B 29 0 SHEET 2 E 5 VAL B 78 ASP B 81 1 O ILE B 79 N ILE B 29 SHEET 3 E 5 ILE B 2 LEU B 6 1 N LEU B 3 O PHE B 80 SHEET 4 E 5 HIS B 106 GLU B 111 1 O PHE B 110 N LEU B 6 SHEET 5 E 5 LEU B 182 ASP B 186 1 O ARG B 183 N LEU B 109 SHEET 1 F 2 ARG B 124 ILE B 126 0 SHEET 2 F 2 VAL B 133 HIS B 135 -1 O TYR B 134 N ARG B 125 CISPEP 1 PHE A 83 PRO A 84 0 4.45 CISPEP 2 PHE C 83 PRO C 84 0 -2.51 CISPEP 3 PHE B 83 PRO B 84 0 4.06 CRYST1 106.681 157.596 84.707 90.00 90.00 90.00 C 2 2 21 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009374 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006345 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011805 0.00000