HEADER DNA BINDING PROTEIN 30-NOV-03 1UST TITLE YEAST HISTONE H1 GLOBULAR DOMAIN I, HHO1P GI, SOLUTION NMR STRUCTURES COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTONE H1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: GLOBULAR DOMAIN I, RESIDUES 38-130; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET17B KEYWDS DNA BINDING PROTEIN, LINKER HISTONE, DNA BINDING DOMAIN, WINGED HELIX KEYWDS 2 FOLD EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR T.ALI,P.COLES,T.J.STEVENS,K.STOTT,J.O.THOMAS REVDAT 3 15-JAN-20 1UST 1 REMARK REVDAT 2 24-FEB-09 1UST 1 VERSN REVDAT 1 01-APR-04 1UST 0 JRNL AUTH T.ALI,P.COLES,T.J.STEVENS,K.STOTT,J.O.THOMAS JRNL TITL TWO HOMOLOGOUS DOMAINS OF SIMILAR STRUCTURE BUT DIFFERENT JRNL TITL 2 STABILITY IN THE YEAST LINKER HISTONE, HHO1P JRNL REF J.MOL.BIOL. V. 338 139 2004 JRNL REFN ISSN 0022-2836 JRNL PMID 15050829 JRNL DOI 10.1016/J.JMB.2004.02.046 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS, GROSSE- REMARK 3 KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU,READ, RICE, REMARK 3 SIMONSON,WARREN REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1UST COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 30-NOV-03. REMARK 100 THE DEPOSITION ID IS D_1290014057. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 288 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NULL REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ REMARK 210 SPECTROMETER MODEL : DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : ARIA, CNS REMARK 210 METHOD USED : DISTANCE GEOMETRY, BOND ANGLE REMARK 210 GEOMETRY REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : MINIMUM ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 COULD ACT AS AN H1-TYPE LINKER HISTONE. HAS BEEN SHOWN REMARK 400 TO BIND DNA. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-10 REMARK 465 RES C SSSEQI REMARK 465 LYS A 38 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ILE A 51 H LEU A 55 1.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLU A 40 -51.39 -151.35 REMARK 500 1 ALA A 42 41.90 -82.36 REMARK 500 1 SER A 43 -142.11 -170.73 REMARK 500 1 GLU A 60 -109.36 56.20 REMARK 500 1 LYS A 62 -48.20 -175.20 REMARK 500 1 TYR A 77 73.51 -119.87 REMARK 500 1 LYS A 117 -40.72 -131.53 REMARK 500 1 PRO A 121 -178.61 -67.23 REMARK 500 1 LYS A 127 -74.13 68.34 REMARK 500 1 GLU A 128 54.29 -158.13 REMARK 500 2 GLU A 40 -136.04 57.79 REMARK 500 2 ALA A 42 -146.72 -76.26 REMARK 500 2 SER A 43 28.65 -79.53 REMARK 500 2 SER A 44 38.87 -77.33 REMARK 500 2 TYR A 47 -44.35 71.49 REMARK 500 2 GLU A 60 -113.35 58.76 REMARK 500 2 LYS A 62 -43.03 -173.29 REMARK 500 2 LYS A 118 170.63 62.23 REMARK 500 2 GLU A 122 49.56 -149.47 REMARK 500 2 GLU A 128 -35.31 75.37 REMARK 500 2 VAL A 129 -50.79 74.82 REMARK 500 3 SER A 43 -7.93 -156.90 REMARK 500 3 GLU A 60 -115.13 63.29 REMARK 500 3 LYS A 62 27.74 -179.18 REMARK 500 3 SER A 84 -62.35 69.75 REMARK 500 3 ALA A 110 43.80 -104.50 REMARK 500 3 SER A 120 120.19 72.04 REMARK 500 3 GLU A 122 42.29 -151.61 REMARK 500 3 LYS A 127 -142.95 -163.46 REMARK 500 3 VAL A 129 47.09 -165.96 REMARK 500 4 LEU A 58 30.97 -89.16 REMARK 500 4 GLU A 60 -48.82 66.63 REMARK 500 4 ARG A 61 -28.26 -155.59 REMARK 500 4 LYS A 62 -42.11 -168.05 REMARK 500 4 LYS A 119 41.72 -92.03 REMARK 500 4 GLU A 122 57.85 -174.73 REMARK 500 4 LYS A 124 45.88 -158.81 REMARK 500 4 GLU A 126 -126.46 63.86 REMARK 500 4 GLU A 128 -28.15 -171.34 REMARK 500 4 VAL A 129 -32.04 -165.96 REMARK 500 5 GLU A 41 -167.50 56.63 REMARK 500 5 SER A 43 35.98 -78.30 REMARK 500 5 SER A 44 38.50 -87.81 REMARK 500 5 GLU A 60 -106.87 57.44 REMARK 500 5 LYS A 62 -40.35 -179.61 REMARK 500 5 PRO A 106 42.08 -78.48 REMARK 500 5 LYS A 107 -48.34 -145.80 REMARK 500 5 LYS A 118 -151.89 -165.25 REMARK 500 5 GLU A 122 40.37 -91.06 REMARK 500 5 LYS A 124 -59.45 -165.95 REMARK 500 REMARK 500 THIS ENTRY HAS 106 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1USS RELATED DB: PDB REMARK 900 YEAST HISTONE H1 GLOBULAR DOMAIN II, HHO1P GII, SOLUTION NMR REMARK 900 STRUCTURES REMARK 900 RELATED ID: 6161 RELATED DB: BMRB DBREF 1UST A 38 130 UNP P53551 H1_YEAST 38 130 SEQRES 1 A 93 LYS LYS GLU GLU ALA SER SER LYS SER TYR ARG GLU LEU SEQRES 2 A 93 ILE ILE GLU GLY LEU THR ALA LEU LYS GLU ARG LYS GLY SEQRES 3 A 93 SER SER ARG PRO ALA LEU LYS LYS PHE ILE LYS GLU ASN SEQRES 4 A 93 TYR PRO ILE VAL GLY SER ALA SER ASN PHE ASP LEU TYR SEQRES 5 A 93 PHE ASN ASN ALA ILE LYS LYS GLY VAL GLU ALA GLY ASP SEQRES 6 A 93 PHE GLU GLN PRO LYS GLY PRO ALA GLY ALA VAL LYS LEU SEQRES 7 A 93 ALA LYS LYS LYS SER PRO GLU VAL LYS LYS GLU LYS GLU SEQRES 8 A 93 VAL SER HELIX 1 1 SER A 46 THR A 56 1 11 HELIX 2 2 ARG A 66 TYR A 77 1 12 HELIX 3 3 TYR A 77 SER A 82 1 6 HELIX 4 4 ASN A 85 ALA A 100 1 16 SHEET 1 AA 3 SER A 64 SER A 65 0 SHEET 2 AA 3 ALA A 112 LEU A 115 -1 O VAL A 113 N SER A 64 SHEET 3 AA 3 PHE A 103 GLU A 104 -1 O GLU A 104 N LYS A 114 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1 MODEL 2 MODEL 3 MODEL 4 MODEL 5 MODEL 6 MODEL 7 MODEL 8 MODEL 9 MODEL 10