HEADER UNKNOWN FUNCTION 10-NOV-03 1RFL TITLE NMR DATA DRIVEN STRUCTURAL MODEL OF G-DOMAIN OF MNME PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROBABLE TRNA MODIFICATION GTPASE TRME; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: GDOMAIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: TRME, THDF, MNME, B3706; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GTPASE DOMAIN, ALPHA/BETA, UNKNOWN FUNCTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR D.MONLEON,V.ESTEVE,M.MARTINEZ-VICENTE,L.YIM,M.E.ARMENGOD,B.CELDA REVDAT 4 02-MAR-22 1RFL 1 REMARK SEQADV REVDAT 3 24-FEB-09 1RFL 1 VERSN REVDAT 2 24-APR-07 1RFL 1 JRNL REVDAT 1 02-DEC-03 1RFL 0 JRNL AUTH D.MONLEON,M.MARTINEZ-VICENTE,V.ESTEVE,L.YIM,S.PRADO, JRNL AUTH 2 M.E.ARMENGOD,B.CELDA JRNL TITL STRUCTURAL INSIGHTS INTO THE GTPASE DOMAIN OF ESCHERICHIA JRNL TITL 2 COLI MNME PROTEIN. JRNL REF PROTEINS V. 66 726 2007 JRNL REFN ISSN 0887-3585 JRNL PMID 17143896 JRNL DOI 10.1002/PROT.21186 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRPIPE 2002, DYANA 2000 REMARK 3 AUTHORS : DELAGLIO ET AL. (NMRPIPE), GUNTERT ET AL. (DYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1RFL COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-NOV-03. REMARK 100 THE DEPOSITION ID IS D_1000020704. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7 REMARK 210 IONIC STRENGTH : 50 MM REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 0.3 GDOMAIN MNME, PHOSPHATE REMARK 210 BUFFER, NACL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : TRIPLE RESONANCE EXPERIMENTS FOR REMARK 210 BB ASSIGNMENT; 3D_15N-SEPARATED_ REMARK 210 NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : DPX; AMX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : SPARKY 2002, DYANA 2000 REMARK 210 METHOD USED : NMR RESTRAINTS WERE OBTAINED REMARK 210 FROM THE BACKBONE ASSIGNMENT REMARK 210 (TALOS ANALYSIS FOR DIHEDRAL REMARK 210 ANGLE CONSTRAINTS) AND FROM THE REMARK 210 15N-EDITED 3D NOESY. ADDITIONAL REMARK 210 STRUCTURAL INFORMATION WAS REMARK 210 OBTAINED FROM THE HOMOLOGOUS REMARK 210 GTPASE PROTEIN STRUCTURES. REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: BACKBONE ASSIGNMENT WOULD NOT BE POSSIBLE WITHOUT REMARK 210 CRYOPROBE SPECTROMETERS BECAUSE OF THE LOW SOLUBILITY AND REMARK 210 STABILITY OF THE PROTEIN. REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LEU A 4 86.65 -160.74 REMARK 500 1 MET A 8 -176.35 -171.68 REMARK 500 1 ARG A 15 150.56 63.87 REMARK 500 1 ASN A 17 85.44 78.56 REMARK 500 1 ALA A 18 35.86 -168.78 REMARK 500 1 LYS A 20 -63.02 -103.63 REMARK 500 1 GLU A 31 -63.46 -92.65 REMARK 500 1 ALA A 32 98.04 -43.40 REMARK 500 1 ALA A 39 30.54 39.26 REMARK 500 1 HIS A 49 -175.84 51.38 REMARK 500 1 ALA A 63 -96.26 -88.28 REMARK 500 1 ARG A 74 -43.25 -165.43 REMARK 500 1 ILE A 77 84.96 40.36 REMARK 500 1 TRP A 81 -162.30 -106.91 REMARK 500 1 GLU A 83 88.77 170.52 REMARK 500 1 ILE A 84 128.50 -173.88 REMARK 500 1 ASP A 88 -55.34 -133.74 REMARK 500 1 ALA A 105 62.85 -69.97 REMARK 500 1 GLU A 106 -32.13 169.80 REMARK 500 1 GLU A 110 -51.54 -150.16 REMARK 500 1 ARG A 114 54.93 -115.18 REMARK 500 1 ALA A 117 -70.06 -101.11 REMARK 500 1 LYS A 118 88.84 82.88 REMARK 500 1 PRO A 120 -168.61 -75.04 REMARK 500 1 VAL A 123 42.31 -142.14 REMARK 500 1 ARG A 125 177.67 -52.95 REMARK 500 1 ASN A 126 107.42 59.36 REMARK 500 1 ALA A 128 76.02 -67.80 REMARK 500 1 ASP A 129 -36.57 176.20 REMARK 500 1 GLU A 133 48.19 -102.32 REMARK 500 1 SER A 138 -69.14 70.76 REMARK 500 1 GLU A 139 -176.01 174.42 REMARK 500 1 VAL A 140 152.56 73.14 REMARK 500 1 ALA A 150 -75.44 -78.96 REMARK 500 1 ARG A 151 -85.12 -43.50 REMARK 500 1 GLU A 154 -70.30 -50.21 REMARK 500 1 SER A 166 -72.36 -58.41 REMARK 500 1 ILE A 169 169.09 55.16 REMARK 500 1 HIS A 170 113.99 87.12 REMARK 500 2 MET A 8 -166.48 -165.97 REMARK 500 2 ASN A 17 83.89 67.48 REMARK 500 2 ALA A 18 -57.50 -158.19 REMARK 500 2 LYS A 20 -87.01 -110.20 REMARK 500 2 ASN A 25 -70.54 -44.07 REMARK 500 2 LEU A 27 -70.67 -48.94 REMARK 500 2 GLU A 31 169.64 54.48 REMARK 500 2 ALA A 32 81.19 42.96 REMARK 500 2 ASP A 37 78.00 -111.93 REMARK 500 2 THR A 41 -160.56 40.64 REMARK 500 2 HIS A 49 -175.55 50.36 REMARK 500 REMARK 500 THIS ENTRY HAS 851 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5861 RELATED DB: BMRB REMARK 900 BACKBONE RESONANCE ASSIGNMENT OF GDOMAIN MNME PROTEIN DBREF 1RFL A 1 168 UNP P25522 TRME_ECOLI 210 377 SEQADV 1RFL ILE A 169 UNP P25522 CLONING ARTIFACT SEQADV 1RFL HIS A 170 UNP P25522 CLONING ARTIFACT SEQADV 1RFL ARG A 171 UNP P25522 CLONING ARTIFACT SEQADV 1RFL ASP A 172 UNP P25522 CLONING ARTIFACT SEQRES 1 A 172 GLY SER LEU LEU ARG GLU GLY MET LYS VAL VAL ILE ALA SEQRES 2 A 172 GLY ARG PRO ASN ALA GLY LYS SER SER LEU LEU ASN ALA SEQRES 3 A 172 LEU ALA GLY ARG GLU ALA ALA ILE VAL THR ASP ILE ALA SEQRES 4 A 172 GLY THR THR ARG ASP VAL LEU ARG GLU HIS ILE HIS ILE SEQRES 5 A 172 ASP GLY MET PRO LEU HIS ILE ILE ASP THR ALA GLY LEU SEQRES 6 A 172 ARG GLU ALA SER ASP GLU VAL GLU ARG ILE GLY ILE GLU SEQRES 7 A 172 ARG ALA TRP GLN GLU ILE GLU GLN ALA ASP ARG VAL LEU SEQRES 8 A 172 PHE MET VAL ASP GLY THR THR THR ASP ALA VAL ASP PRO SEQRES 9 A 172 ALA GLU ILE TRP PRO GLU PHE ILE ALA ARG LEU PRO ALA SEQRES 10 A 172 LYS LEU PRO ILE THR VAL VAL ARG ASN LYS ALA ASP ILE SEQRES 11 A 172 THR GLY GLU THR LEU GLY MET SER GLU VAL ASN GLY HIS SEQRES 12 A 172 ALA LEU ILE ARG LEU SER ALA ARG THR GLY GLU GLY VAL SEQRES 13 A 172 ASP VAL LEU ARG ASN HIS LEU LYS GLN SER MET GLY ILE SEQRES 14 A 172 HIS ARG ASP HELIX 1 1 LYS A 20 ALA A 28 1 9 HELIX 2 2 LEU A 65 GLY A 76 1 12 HELIX 3 3 ASP A 103 ILE A 112 1 10 HELIX 4 4 ILE A 130 THR A 134 5 5 HELIX 5 5 VAL A 156 GLN A 165 1 10 SHEET 1 A 2 LYS A 9 ILE A 12 0 SHEET 2 A 2 ALA A 87 LEU A 91 1 O ASP A 88 N LYS A 9 SHEET 1 B 2 PRO A 120 ILE A 121 0 SHEET 2 B 2 ILE A 146 ARG A 147 1 O ILE A 146 N ILE A 121 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1 MODEL 2 MODEL 3 MODEL 4 MODEL 5 MODEL 6 MODEL 7 MODEL 8 MODEL 9 MODEL 10 MODEL 11 MODEL 12 MODEL 13 MODEL 14 MODEL 15 MODEL 16 MODEL 17 MODEL 18 MODEL 19 MODEL 20