HEADER TRANSFERASE 13-JUL-01 1JKT TITLE TETRAGONAL CRYSTAL FORM OF A CATALYTIC DOMAIN OF DEATH-ASSOCIATED TITLE 2 PROTEIN KINASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: DEATH-ASSOCIATED PROTEIN KINASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: CATALYTIC DOMAIN, PROTEIN KINASE DOMAIN; COMPND 5 SYNONYM: DAP KINASE 1; COMPND 6 EC: 2.7.1.-; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR V.TERESHKO,M.TEPLOVA,J.BRUNZELLE,D.M.WATTERSON,M.EGLI REVDAT 3 13-JUL-11 1JKT 1 VERSN REVDAT 2 24-FEB-09 1JKT 1 VERSN REVDAT 1 01-APR-02 1JKT 0 JRNL AUTH V.TERESHKO,M.TEPLOVA,J.BRUNZELLE,D.M.WATTERSON,M.EGLI JRNL TITL CRYSTAL STRUCTURES OF THE CATALYTIC DOMAIN OF HUMAN PROTEIN JRNL TITL 2 KINASE ASSOCIATED WITH APOPTOSIS AND TUMOR SUPPRESSION. JRNL REF NAT.STRUCT.BIOL. V. 8 899 2001 JRNL REFN ISSN 1072-8368 JRNL PMID 11573098 JRNL DOI 10.1038/NSB1001-899 REMARK 2 REMARK 2 RESOLUTION. 3.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 58.72 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 95.5 REMARK 3 NUMBER OF REFLECTIONS : 8255 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.273 REMARK 3 R VALUE (WORKING SET) : 0.272 REMARK 3 FREE R VALUE : 0.297 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.600 REMARK 3 FREE R VALUE TEST SET COUNT : 903 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.58 REMARK 3 REFLECTION IN BIN (WORKING SET) : 563 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3120 REMARK 3 BIN FREE R VALUE SET COUNT : 38 REMARK 3 BIN FREE R VALUE : 0.3610 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4468 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 50.82 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.80000 REMARK 3 B22 (A**2) : 4.80000 REMARK 3 B33 (A**2) : -9.61000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.786 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.626 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 37.981 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.857 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.829 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4564 ; 0.026 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6166 ; 2.146 ; 1.962 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 550 ; 2.904 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 874 ;21.397 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 688 ; 0.121 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3426 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 3113 ; 0.384 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 416 ; 0.275 ; 0.500 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 71 ; 0.371 ; 0.300 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 3 ; 0.247 ; 0.500 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2750 ; 1.166 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4466 ; 2.164 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1814 ; 2.769 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1700 ; 4.715 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 276 REMARK 3 ORIGIN FOR THE GROUP (A): -22.1917 40.3528 11.7130 REMARK 3 T TENSOR REMARK 3 T11: 0.2342 T22: 0.2395 REMARK 3 T33: 0.3206 T12: 0.0844 REMARK 3 T13: -0.0765 T23: -0.0305 REMARK 3 L TENSOR REMARK 3 L11: 0.5572 L22: 1.6355 REMARK 3 L33: 1.4875 L12: -0.1869 REMARK 3 L13: -0.2317 L23: -0.7169 REMARK 3 S TENSOR REMARK 3 S11: 0.1273 S12: 0.1857 S13: 0.2070 REMARK 3 S21: -0.2137 S22: -0.0456 S23: -0.0276 REMARK 3 S31: 0.1683 S32: 0.0774 S33: -0.0817 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 2 B 276 REMARK 3 ORIGIN FOR THE GROUP (A): 1.6875 10.7644 -0.3280 REMARK 3 T TENSOR REMARK 3 T11: 0.1232 T22: 0.0803 REMARK 3 T33: 0.2336 T12: 0.0565 REMARK 3 T13: -0.0578 T23: 0.0075 REMARK 3 L TENSOR REMARK 3 L11: 0.5042 L22: 0.6907 REMARK 3 L33: 2.9909 L12: 0.0903 REMARK 3 L13: 0.4498 L23: -0.2059 REMARK 3 S TENSOR REMARK 3 S11: -0.1006 S12: -0.1129 S13: 0.1154 REMARK 3 S21: 0.0298 S22: -0.0140 S23: -0.0340 REMARK 3 S31: -0.1379 S32: -0.1270 S33: 0.1147 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1JKT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-AUG-01. REMARK 100 THE RCSB ID CODE IS RCSB013887. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-SEP-00 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 7.00 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 5ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8704 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.500 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.5 REMARK 200 DATA REDUNDANCY : 5.400 REMARK 200 R MERGE (I) : 0.07200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 4.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.39000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.08 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.68 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 7.00 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+1/4 REMARK 290 4555 Y,-X,Z+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 106.30500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 53.15250 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 159.45750 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 278 REMARK 465 ASP A 279 REMARK 465 THR A 280 REMARK 465 GLN A 281 REMARK 465 GLN A 282 REMARK 465 ALA A 283 REMARK 465 LEU A 284 REMARK 465 SER A 285 REMARK 465 SER A 286 REMARK 465 ALA A 287 REMARK 465 TRP A 288 REMARK 465 SER A 289 REMARK 465 HIS A 290 REMARK 465 PRO A 291 REMARK 465 GLN A 292 REMARK 465 PHE A 293 REMARK 465 GLU A 294 REMARK 465 LYS A 295 REMARK 465 LYS B 278 REMARK 465 ASP B 279 REMARK 465 THR B 280 REMARK 465 GLN B 281 REMARK 465 GLN B 282 REMARK 465 ALA B 283 REMARK 465 LEU B 284 REMARK 465 SER B 285 REMARK 465 SER B 286 REMARK 465 ALA B 287 REMARK 465 TRP B 288 REMARK 465 SER B 289 REMARK 465 HIS B 290 REMARK 465 PRO B 291 REMARK 465 GLN B 292 REMARK 465 PHE B 293 REMARK 465 GLU B 294 REMARK 465 LYS B 295 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 109 CG CD OE1 OE2 REMARK 470 GLU B 109 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O THR A 225 N ASN A 228 2.03 REMARK 500 O GLY A 20 N VAL A 27 2.14 REMARK 500 OE2 GLU A 113 NE1 TRP A 274 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 181 C - N - CA ANGL. DEV. = 9.0 DEGREES REMARK 500 GLU A 192 N - CA - C ANGL. DEV. = 18.2 DEGREES REMARK 500 THR B 180 N - CA - C ANGL. DEV. = 17.7 DEGREES REMARK 500 GLU B 192 N - CA - C ANGL. DEV. = 18.0 DEGREES REMARK 500 PRO B 193 C - N - CA ANGL. DEV. = -10.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 4 -95.17 -117.01 REMARK 500 GLU A 7 -156.00 -163.66 REMARK 500 ASP A 10 -36.07 -39.89 REMARK 500 TYR A 12 -35.70 -132.62 REMARK 500 THR A 15 -170.31 -61.83 REMARK 500 GLU A 17 151.15 -46.64 REMARK 500 PHE A 24 36.49 -140.28 REMARK 500 CYS A 30 144.67 -177.92 REMARK 500 THR A 35 -35.08 -155.12 REMARK 500 LEU A 37 85.80 -68.48 REMARK 500 TYR A 39 -132.26 -112.75 REMARK 500 ALA A 40 102.51 165.53 REMARK 500 LYS A 46 -138.27 -71.50 REMARK 500 LYS A 50 20.07 -56.79 REMARK 500 SER A 51 30.87 -150.83 REMARK 500 ILE A 61 -89.23 -56.86 REMARK 500 GLU A 62 -26.94 -34.39 REMARK 500 LYS A 69 -0.62 -42.54 REMARK 500 GLN A 72 95.70 170.62 REMARK 500 PRO A 74 -103.63 -32.90 REMARK 500 ASN A 75 15.43 -52.38 REMARK 500 ILE A 77 156.96 -38.92 REMARK 500 LYS A 86 -74.45 -28.21 REMARK 500 ALA A 97 3.24 -157.71 REMARK 500 LYS A 108 44.94 -101.05 REMARK 500 GLU A 109 -87.49 35.03 REMARK 500 SER A 110 -132.82 -116.79 REMARK 500 LEU A 111 -122.80 -151.97 REMARK 500 GLU A 113 -51.00 -28.05 REMARK 500 ALA A 116 -79.68 -60.42 REMARK 500 THR A 117 -34.30 -34.86 REMARK 500 LYS A 121 -2.15 -56.76 REMARK 500 TYR A 128 -78.84 -34.99 REMARK 500 TYR A 129 -52.40 -23.56 REMARK 500 HIS A 131 -70.61 -27.61 REMARK 500 SER A 132 4.18 -56.59 REMARK 500 ILE A 135 83.33 -156.83 REMARK 500 PHE A 138 -30.56 82.61 REMARK 500 LEU A 140 98.63 -40.55 REMARK 500 ASP A 149 120.30 -172.18 REMARK 500 VAL A 152 142.97 -38.76 REMARK 500 ALA A 165 139.51 -35.89 REMARK 500 PHE A 170 -66.19 -138.71 REMARK 500 GLU A 173 97.42 -48.07 REMARK 500 PHE A 174 -144.11 -107.37 REMARK 500 LYS A 175 -11.30 32.60 REMARK 500 ASN A 176 -102.47 43.77 REMARK 500 ILE A 177 -166.20 73.60 REMARK 500 PRO A 181 -6.22 -34.00 REMARK 500 TYR A 191 69.91 34.57 REMARK 500 REMARK 500 THIS ENTRY HAS 142 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 LYS A 175 24.3 L L OUTSIDE RANGE REMARK 500 PHE A 178 23.8 L L OUTSIDE RANGE REMARK 500 GLU A 192 22.7 L L OUTSIDE RANGE REMARK 500 THR B 180 21.4 L L OUTSIDE RANGE REMARK 500 PHE B 183 24.8 L L OUTSIDE RANGE REMARK 500 GLU B 192 22.9 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL DBREF 1JKT A 2 285 UNP P53355 DAPK1_HUMAN 2 285 DBREF 1JKT B 2 285 UNP P53355 DAPK1_HUMAN 2 285 SEQADV 1JKT SER A 286 UNP P53355 SEE REMARK 999 SEQADV 1JKT ALA A 287 UNP P53355 SEE REMARK 999 SEQADV 1JKT TRP A 288 UNP P53355 SEE REMARK 999 SEQADV 1JKT SER A 289 UNP P53355 SEE REMARK 999 SEQADV 1JKT HIS A 290 UNP P53355 SEE REMARK 999 SEQADV 1JKT PRO A 291 UNP P53355 SEE REMARK 999 SEQADV 1JKT GLN A 292 UNP P53355 SEE REMARK 999 SEQADV 1JKT PHE A 293 UNP P53355 SEE REMARK 999 SEQADV 1JKT GLU A 294 UNP P53355 SEE REMARK 999 SEQADV 1JKT LYS A 295 UNP P53355 SEE REMARK 999 SEQADV 1JKT SER B 286 UNP P53355 SEE REMARK 999 SEQADV 1JKT ALA B 287 UNP P53355 SEE REMARK 999 SEQADV 1JKT TRP B 288 UNP P53355 SEE REMARK 999 SEQADV 1JKT SER B 289 UNP P53355 SEE REMARK 999 SEQADV 1JKT HIS B 290 UNP P53355 SEE REMARK 999 SEQADV 1JKT PRO B 291 UNP P53355 SEE REMARK 999 SEQADV 1JKT GLN B 292 UNP P53355 SEE REMARK 999 SEQADV 1JKT PHE B 293 UNP P53355 SEE REMARK 999 SEQADV 1JKT GLU B 294 UNP P53355 SEE REMARK 999 SEQADV 1JKT LYS B 295 UNP P53355 SEE REMARK 999 SEQRES 1 A 294 THR VAL PHE ARG GLN GLU ASN VAL ASP ASP TYR TYR ASP SEQRES 2 A 294 THR GLY GLU GLU LEU GLY SER GLY GLN PHE ALA VAL VAL SEQRES 3 A 294 LYS LYS CYS ARG GLU LYS SER THR GLY LEU GLN TYR ALA SEQRES 4 A 294 ALA LYS PHE ILE LYS LYS ARG ARG THR LYS SER SER ARG SEQRES 5 A 294 ARG GLY VAL SER ARG GLU ASP ILE GLU ARG GLU VAL SER SEQRES 6 A 294 ILE LEU LYS GLU ILE GLN HIS PRO ASN VAL ILE THR LEU SEQRES 7 A 294 HIS GLU VAL TYR GLU ASN LYS THR ASP VAL ILE LEU ILE SEQRES 8 A 294 LEU GLU LEU VAL ALA GLY GLY GLU LEU PHE ASP PHE LEU SEQRES 9 A 294 ALA GLU LYS GLU SER LEU THR GLU GLU GLU ALA THR GLU SEQRES 10 A 294 PHE LEU LYS GLN ILE LEU ASN GLY VAL TYR TYR LEU HIS SEQRES 11 A 294 SER LEU GLN ILE ALA HIS PHE ASP LEU LYS PRO GLU ASN SEQRES 12 A 294 ILE MET LEU LEU ASP ARG ASN VAL PRO LYS PRO ARG ILE SEQRES 13 A 294 LYS ILE ILE ASP PHE GLY LEU ALA HIS LYS ILE ASP PHE SEQRES 14 A 294 GLY ASN GLU PHE LYS ASN ILE PHE GLY THR PRO GLU PHE SEQRES 15 A 294 VAL ALA PRO GLU ILE VAL ASN TYR GLU PRO LEU GLY LEU SEQRES 16 A 294 GLU ALA ASP MET TRP SER ILE GLY VAL ILE THR TYR ILE SEQRES 17 A 294 LEU LEU SER GLY ALA SER PRO PHE LEU GLY ASP THR LYS SEQRES 18 A 294 GLN GLU THR LEU ALA ASN VAL SER ALA VAL ASN TYR GLU SEQRES 19 A 294 PHE GLU ASP GLU TYR PHE SER ASN THR SER ALA LEU ALA SEQRES 20 A 294 LYS ASP PHE ILE ARG ARG LEU LEU VAL LYS ASP PRO LYS SEQRES 21 A 294 LYS ARG MET THR ILE GLN ASP SER LEU GLN HIS PRO TRP SEQRES 22 A 294 ILE LYS PRO LYS ASP THR GLN GLN ALA LEU SER SER ALA SEQRES 23 A 294 TRP SER HIS PRO GLN PHE GLU LYS SEQRES 1 B 294 THR VAL PHE ARG GLN GLU ASN VAL ASP ASP TYR TYR ASP SEQRES 2 B 294 THR GLY GLU GLU LEU GLY SER GLY GLN PHE ALA VAL VAL SEQRES 3 B 294 LYS LYS CYS ARG GLU LYS SER THR GLY LEU GLN TYR ALA SEQRES 4 B 294 ALA LYS PHE ILE LYS LYS ARG ARG THR LYS SER SER ARG SEQRES 5 B 294 ARG GLY VAL SER ARG GLU ASP ILE GLU ARG GLU VAL SER SEQRES 6 B 294 ILE LEU LYS GLU ILE GLN HIS PRO ASN VAL ILE THR LEU SEQRES 7 B 294 HIS GLU VAL TYR GLU ASN LYS THR ASP VAL ILE LEU ILE SEQRES 8 B 294 LEU GLU LEU VAL ALA GLY GLY GLU LEU PHE ASP PHE LEU SEQRES 9 B 294 ALA GLU LYS GLU SER LEU THR GLU GLU GLU ALA THR GLU SEQRES 10 B 294 PHE LEU LYS GLN ILE LEU ASN GLY VAL TYR TYR LEU HIS SEQRES 11 B 294 SER LEU GLN ILE ALA HIS PHE ASP LEU LYS PRO GLU ASN SEQRES 12 B 294 ILE MET LEU LEU ASP ARG ASN VAL PRO LYS PRO ARG ILE SEQRES 13 B 294 LYS ILE ILE ASP PHE GLY LEU ALA HIS LYS ILE ASP PHE SEQRES 14 B 294 GLY ASN GLU PHE LYS ASN ILE PHE GLY THR PRO GLU PHE SEQRES 15 B 294 VAL ALA PRO GLU ILE VAL ASN TYR GLU PRO LEU GLY LEU SEQRES 16 B 294 GLU ALA ASP MET TRP SER ILE GLY VAL ILE THR TYR ILE SEQRES 17 B 294 LEU LEU SER GLY ALA SER PRO PHE LEU GLY ASP THR LYS SEQRES 18 B 294 GLN GLU THR LEU ALA ASN VAL SER ALA VAL ASN TYR GLU SEQRES 19 B 294 PHE GLU ASP GLU TYR PHE SER ASN THR SER ALA LEU ALA SEQRES 20 B 294 LYS ASP PHE ILE ARG ARG LEU LEU VAL LYS ASP PRO LYS SEQRES 21 B 294 LYS ARG MET THR ILE GLN ASP SER LEU GLN HIS PRO TRP SEQRES 22 B 294 ILE LYS PRO LYS ASP THR GLN GLN ALA LEU SER SER ALA SEQRES 23 B 294 TRP SER HIS PRO GLN PHE GLU LYS HELIX 1 1 ASN A 8 TYR A 12 5 5 HELIX 2 2 SER A 57 LYS A 69 1 13 HELIX 3 3 GLU A 100 LEU A 105 1 6 HELIX 4 4 ALA A 106 GLU A 109 5 4 HELIX 5 5 THR A 112 SER A 132 1 21 HELIX 6 6 LYS A 141 ILE A 145 5 5 HELIX 7 7 ALA A 185 ASN A 190 1 6 HELIX 8 8 GLY A 195 LEU A 210 1 16 HELIX 9 9 THR A 221 ALA A 227 1 7 HELIX 10 10 GLU A 237 SER A 242 1 6 HELIX 11 11 SER A 245 ARG A 254 1 10 HELIX 12 12 THR A 265 LEU A 270 1 6 HELIX 13 13 GLN A 271 LYS A 276 5 6 HELIX 14 14 ASN B 8 TYR B 12 5 5 HELIX 15 15 SER B 57 GLU B 70 1 14 HELIX 16 16 PHE B 102 PHE B 104 5 3 HELIX 17 17 THR B 112 SER B 132 1 21 HELIX 18 18 LYS B 141 GLU B 143 5 3 HELIX 19 19 ALA B 198 GLY B 213 1 16 HELIX 20 20 THR B 221 ALA B 231 1 11 HELIX 21 21 LEU B 247 ARG B 254 1 8 HELIX 22 22 THR B 265 GLN B 271 1 7 SHEET 1 A 5 THR A 15 GLU A 18 0 SHEET 2 A 5 ALA A 25 CYS A 30 -1 N LYS A 29 O GLU A 17 SHEET 3 A 5 TYR A 39 LYS A 45 -1 N TYR A 39 O CYS A 30 SHEET 4 A 5 ASP A 88 LEU A 93 -1 O VAL A 89 N ILE A 44 SHEET 5 A 5 LEU A 79 GLU A 84 -1 N HIS A 80 O ILE A 92 SHEET 1 B 2 ILE A 135 ALA A 136 0 SHEET 2 B 2 HIS A 166 LYS A 167 -1 N HIS A 166 O ALA A 136 SHEET 1 C 2 MET A 146 LEU A 147 0 SHEET 2 C 2 ILE A 157 LYS A 158 -1 N LYS A 158 O MET A 146 SHEET 1 D 3 LYS B 28 CYS B 30 0 SHEET 2 D 3 TYR B 39 ALA B 41 -1 N TYR B 39 O CYS B 30 SHEET 3 D 3 LEU B 93 GLU B 94 -1 N LEU B 93 O ALA B 40 SHEET 1 E 3 PHE B 43 LYS B 45 0 SHEET 2 E 3 ASP B 88 ILE B 90 -1 N VAL B 89 O ILE B 44 SHEET 3 E 3 TYR B 83 GLU B 84 -1 N TYR B 83 O ILE B 90 SHEET 1 F 3 GLY B 99 GLU B 100 0 SHEET 2 F 3 ILE B 145 LEU B 147 -1 N LEU B 147 O GLY B 99 SHEET 3 F 3 LYS B 158 ILE B 159 -1 O LYS B 158 N MET B 146 SHEET 1 G 2 ILE B 135 ALA B 136 0 SHEET 2 G 2 HIS B 166 LYS B 167 -1 O HIS B 166 N ALA B 136 CRYST1 58.370 58.370 212.610 90.00 90.00 90.00 P 41 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017132 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017132 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004703 0.00000