OLDERADO

OLDERADO cluster and domain composition for PDB entry 2LFE

Solution NMR structure of N-terminal domain of human E3 ubiquitin-protein ligase HECW2, Northeast structural genomics consortium (NESG) target ht6306A
Summary of Olderado results
Most representative model 10
Largest domain comprises residues Chain A: 59-69, 74-80, 90-97, 119-125, 136-143, 149-162
RMSD of all models in ensemble (Cα atoms) 1.1 Å

Protein domains shown as surfaces Representative models from each cluster
View in 3D View in 3D

Domain composition (NMRCore)
Domain number and colour code Residues Core Cumulative core
1 Chain A: 59-69, 74-80, 90-97, 119-125, 136-143, 149-162 53.4 % 53.4 %
2 Chain A: 108-113 5.8 % 59.2 %
3 Chain A: 130-135 5.8 % 65.1 %
4 Chain A: 85-89 4.8 % 69.9 %
5 Chain A: 98-102 4.8 % 74.8 %
6 Chain A: 103-107 4.8 % 79.6 %
7 Chain A: 114-118 4.8 % 84.5 %
8 Chain A: 70-73 3.9 % 88.3 %
9 Chain A: 81-84 3.9 % 92.2 %
10 Chain A: 126-129 3.9 % 96.1 %
11 Chain A: 57-58 1.9 % 98.0 %
12 Chain A: 144-145 1.9 % 100.0 %

Cluster identification (NMRClust)
Cluster number and colour code Representative Members
1 10 3, 4, 5, 7, 9, 10, 11, 13, 14
2 2 1, 2, 8
3 12 12, 15, 16
 
List of outliers (subfamily with one member): 6