OLDERADO

OLDERADO cluster and domain composition for PDB entry 2KQ2

Solution NMR structure of the apo form of a ribonuclease H domain of protein DSY1790 from Desulfitobacterium hafniense, Northeast Structural Genomics target DhR1A
Summary of Olderado results
Most representative model 15
Largest domain comprises residues Chain A: 4-5, 7-10, 15-40, 121-137
RMSD of all models in ensemble (Cα atoms) 8.5 Å

Protein domains shown as surfaces Representative models from each cluster
View in 3D View in 3D

Domain composition (NMRCore)
Domain number and colour code Residues Core Cumulative core
1 Chain A: 4-5, 7-10, 15-40, 121-137 43.4 % 43.4 %
2 Chain A: 51-74 21.2 % 64.6 %
3 Chain A: 95-100, 103-107 9.7 % 74.3 %
4 Chain A: 79-86 7.1 % 81.4 %
5 Chain A: 108-115 7.1 % 88.5 %
6 Chain A: 42-47 5.3 % 93.8 %
7 Chain A: 88-91 3.5 % 97.3 %
8 Chain A: 140-142 2.6 % 100.0 %

Cluster identification (NMRClust)
Cluster number and colour code Representative Members
1 15 6, 9, 15, 16, 19
2 3 1, 2, 3, 4, 20
3 14 10, 11, 12, 14
4 8 7, 8, 13
5 17 5, 17
 
List of outliers (subfamily with one member): 18