OLDERADO

OLDERADO cluster and domain composition for PDB entry 2JQY

Outer Membrane Protein G
Summary of Olderado results
Most representative model 3
Largest domain comprises residues Chain A: 6-16, 29-52, 67-95, 105-141, 148-176, 187-212, 237-255, 273-280
RMSD of all models in ensemble (Cα atoms) 7.5 Å

Protein domains shown as surfaces Representative models from each cluster
View in 3D View in 3D

Domain composition (NMRCore)
Domain number and colour code Residues Core Cumulative core
1 Chain A: 6-16, 29-52, 67-95, 105-141, 148-176, 187-212, 237-255, 273-280 68.3 % 68.3 %
2 Chain A: 56-62 2.6 % 70.9 %
3 Chain A: 177-182 2.2 % 73.1 %
4 Chain A: 225-230 2.2 % 75.4 %
5 Chain A: 231-236 2.2 % 77.6 %
6 Chain A: 257-260, 262-263 2.2 % 79.8 %
7 Chain A: 1-5 1.9 % 81.7 %
8 Chain A: 142-146 1.9 % 83.6 %
9 Chain A: 17-20 1.5 % 85.1 %
10 Chain A: 22-25 1.5 % 86.6 %
11 Chain A: 96-99 1.5 % 88.1 %
12 Chain A: 183-186 1.5 % 89.5 %
13 Chain A: 221-224 1.5 % 91.0 %
14 Chain A: 265-268 1.5 % 92.5 %
15 Chain A: 269-272 1.5 % 94.0 %
16 Chain A: 53-55 1.1 % 95.1 %
17 Chain A: 100-102 1.1 % 96.3 %
18 Chain A: 214-216 1.1 % 97.4 %
19 Chain A: 218-220 1.1 % 98.5 %
20 Chain A: 26-27 0.8 % 99.2 %
21 Chain A: 64-65 0.8 % 100.0 %

Cluster identification (NMRClust)
Cluster number and colour code Representative Members
1 3 3, 5, 7, 9
2 8 2, 4, 6, 8
 
List of outliers (subfamily with one member): 1, 10